Metagenome / Metatranscriptome Family F095581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095581
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	57 residues
Representative Sequence	PIYLELADGNMFFLGRARVSGNTSIEQKVPLKGLKTKPRRAVVNYYDDVLASPN
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	90.48 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.66% β-sheet: 19.51% Coil/Unstructured: 76.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00756	Esterase	8.57
PF13602	ADH_zinc_N_2	3.81
PF01523	PmbA_TldD	2.86
PF00581	Rhodanese	1.90
PF02517	Rce1-like	1.90
PF00005	ABC_tran	1.90
PF02738	MoCoBD_1	0.95
PF01926	MMR_HSR1	0.95
PF04679	DNA_ligase_A_C	0.95
PF13393	tRNA-synt_His	0.95
PF00107	ADH_zinc_N	0.95
PF03551	PadR	0.95
PF13474	SnoaL_3	0.95
PF07238	PilZ	0.95
PF05237	Obsolete Pfam Family	0.95
PF02371	Transposase_20	0.95
PF13432	TPR_16	0.95
PF07549	Sec_GG	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	2.86
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.90
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	0.95
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	0.95
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.95
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.95
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.95
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	84.76 %
Unclassified	root	N/A	1.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.05 %
Unclassified	root	N/A	1.90 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.95 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	18.10 %
Unclassified	root	N/A	1.90 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.95 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.95 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.95 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.95 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18.10 %
Unclassified	root	N/A	1.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.95 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.95 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.95 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9.52 %
Unclassified	root	N/A	1.90 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.95 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.95 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.95 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.81 %
Unclassified	root	N/A	1.90 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.95 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.95 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.95 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.95 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	42.86 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.81 %
Unclassified	root	N/A	1.90 %
Granulicella sp. S190	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	0.95 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.95 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.95 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.95 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_106049231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3655	Open in IMG/M
3300004091\|Ga0062387_100975394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	647	Open in IMG/M
3300004121\|Ga0058882_1739830	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1102	Open in IMG/M
3300004134\|Ga0058906_1248781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	635	Open in IMG/M
3300004139\|Ga0058897_10009404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	745	Open in IMG/M
3300005166\|Ga0066674_10060232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1727	Open in IMG/M
3300005176\|Ga0066679_10346848	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	970	Open in IMG/M
3300005178\|Ga0066688_10440104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005187\|Ga0066675_10372854	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005445\|Ga0070708_100287824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1547	Open in IMG/M
3300005446\|Ga0066686_10059420	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2360	Open in IMG/M
3300005598\|Ga0066706_10964468	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	660	Open in IMG/M
3300005602\|Ga0070762_10016959	All Organisms → cellular organisms → Bacteria	3748	Open in IMG/M
3300006028\|Ga0070717_10289615	All Organisms → cellular organisms → Bacteria → Acidobacteria	1454	Open in IMG/M
3300006028\|Ga0070717_11862729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300006032\|Ga0066696_10567149	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M
3300006046\|Ga0066652_101041713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	776	Open in IMG/M
3300006354\|Ga0075021_10124861	Not Available	1543	Open in IMG/M
3300006794\|Ga0066658_10576214	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300009088\|Ga0099830_10779602	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300009137\|Ga0066709_100791289	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300009137\|Ga0066709_103012874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300009148\|Ga0105243_11234924	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300009629\|Ga0116119_1198056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009759\|Ga0116101_1108433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300009824\|Ga0116219_10464967	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300010043\|Ga0126380_11731633	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300010048\|Ga0126373_10563927	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300010304\|Ga0134088_10053246	All Organisms → cellular organisms → Bacteria → Acidobacteria	1862	Open in IMG/M
3300010329\|Ga0134111_10138551	All Organisms → cellular organisms → Bacteria → Acidobacteria	956	Open in IMG/M
3300010337\|Ga0134062_10136417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	1081	Open in IMG/M
3300010341\|Ga0074045_10575009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300010359\|Ga0126376_11428709	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300010360\|Ga0126372_10360201	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300010361\|Ga0126378_11779851	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300010379\|Ga0136449_104154555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300010398\|Ga0126383_13162087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300011120\|Ga0150983_10766447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300011120\|Ga0150983_11029995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300011120\|Ga0150983_14289359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300011120\|Ga0150983_14743593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300012189\|Ga0137388_10028649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4309	Open in IMG/M
3300012203\|Ga0137399_10035166	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3501	Open in IMG/M
3300012285\|Ga0137370_11018253	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012469\|Ga0150984_113709273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300012929\|Ga0137404_10294414	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300012971\|Ga0126369_10264546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1700	Open in IMG/M
3300012971\|Ga0126369_13517123	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300012972\|Ga0134077_10251018	All Organisms → cellular organisms → Bacteria → Acidobacteria	732	Open in IMG/M
3300014491\|Ga0182014_10042684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3254	Open in IMG/M
3300016341\|Ga0182035_10412670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1137	Open in IMG/M
3300016750\|Ga0181505_10734421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300017933\|Ga0187801_10191530	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300017975\|Ga0187782_10683102	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300017975\|Ga0187782_11651938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300017995\|Ga0187816_10266857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	748	Open in IMG/M
3300018017\|Ga0187872_10231930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	835	Open in IMG/M
3300018037\|Ga0187883_10634144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300018062\|Ga0187784_11260074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300018088\|Ga0187771_10649184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300018090\|Ga0187770_10206845	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300018090\|Ga0187770_11533509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300018431\|Ga0066655_10167681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1323	Open in IMG/M
3300020579\|Ga0210407_10029687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4061	Open in IMG/M
3300020582\|Ga0210395_10961800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300021170\|Ga0210400_10357083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300021170\|Ga0210400_11255861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300021181\|Ga0210388_10014812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6239	Open in IMG/M
3300021432\|Ga0210384_10193678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1827	Open in IMG/M
3300021474\|Ga0210390_11654809	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300021559\|Ga0210409_11206614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300022499\|Ga0242641_1004886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300022503\|Ga0242650_1003951	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300022523\|Ga0242663_1087986	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300022532\|Ga0242655_10068417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300025898\|Ga0207692_10919471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300025903\|Ga0207680_11068178	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300025922\|Ga0207646_10978564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	748	Open in IMG/M
3300026281\|Ga0209863_10254061	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300026296\|Ga0209235_1149554	All Organisms → cellular organisms → Bacteria → Acidobacteria	931	Open in IMG/M
3300026314\|Ga0209268_1053486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300027609\|Ga0209221_1077443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	867	Open in IMG/M
3300027829\|Ga0209773_10002469	All Organisms → cellular organisms → Bacteria → Acidobacteria	6650	Open in IMG/M
3300027853\|Ga0209274_10242204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	922	Open in IMG/M
3300027855\|Ga0209693_10198172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300027875\|Ga0209283_10779189	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300027894\|Ga0209068_10622935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300028017\|Ga0265356_1014277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300028906\|Ga0308309_10005394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7722	Open in IMG/M
3300030740\|Ga0265460_10528021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300030743\|Ga0265461_10341609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300030940\|Ga0265740_1038386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300031057\|Ga0170834_101581453	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300031122\|Ga0170822_11785824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031231\|Ga0170824_118585328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300031231\|Ga0170824_121297807	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300031231\|Ga0170824_122793065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S190	1213	Open in IMG/M
3300031754\|Ga0307475_11483906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300031820\|Ga0307473_11119667	Not Available	581	Open in IMG/M
3300031890\|Ga0306925_10652647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300031962\|Ga0307479_10364826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1428	Open in IMG/M
3300032783\|Ga0335079_10854120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300032783\|Ga0335079_11244156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300032805\|Ga0335078_10016878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	10845	Open in IMG/M
3300032955\|Ga0335076_10855932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.19%
Host-Associated	Host-Associated	3.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	10.48%
Plants	Host-Associated → Plants	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Freshwater	Environmental → Aquatic → Freshwater	8.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.81%
Sediment	Environmental → Aquatic → Sediment	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.95%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004134	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1060492317	3300000955	Soil	AVPLYLELADGNIFFLGRVRLLGNSSVEQKLPIKGLKTKPKRAVFNYYDDVLASPN*
Ga0062387_1009753941	3300004091	Bog Forest Soil	IYLELANGNVFFLGRVRLLGSSTFDQKIPITGLKDTPRRALINYYDDVLASPN*
Ga0058882_17398301	3300004121	Forest Soil	VPLYVELTDGSIHFLGRARMTGNNTTEQKIPLKGLKTKPRGAMLNYYDDVLASPN*
Ga0058906_12487812	3300004134	Forest Soil	GAKFRMLVPIYLELANGNTLFLGRARLSGNSTFEQKIPLKGVKDVPRRALINFYDDVLASPN*
Ga0058897_100094041	3300004139	Forest Soil	VNDSFRMLVPIYLELPNGMFFLGRARLTGNSTFDQKIPLKGLKDKPKRAVLNYYDDVLASPN*
Ga0066674_100602321	3300005166	Soil	LELADGRMVNLGRAHVTGNTSIEQKVPLKGLKDAPKRALLSYYDDVLAAPN*
Ga0066679_103468481	3300005176	Soil	VPVYLELDDGRIVFLGRMRIVGNKSEAAKVPLKGLKAKPRRAMINYYDDVLASPG*
Ga0066688_104401042	3300005178	Soil	VPIYLELADGRIANLGRVTLVGNYSADVKVPLKGIKDTPRRAMVNYYDDVLASPN*
Ga0066675_103728541	3300005187	Soil	VPVYLELDDGRIVFLGRLRLVGNSSAAPKVPLKGLKTKPRRALINYFDDVLASAN*
Ga0070708_1002878243	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KFPHVVPIYLELADGRTVTLGRANLTGNTSFEQKVPIKGLKEKLRRALVNYYDDVLASDN
Ga0066686_100594202	3300005446	Soil	IYLELADGRMVNLGRAHVTGNTSIEQKVPLKGLKDAPKRALLSYYDDVLAAPN*
Ga0066706_109644682	3300005598	Soil	PIYLELADGNMFALGRAKLAGNSSMEQKIPLRGLKTKPRRAVLNYYDDVLASPN*
Ga0070762_100169595	3300005602	Soil	VPIYFELAHGHPVFVGRARLAGDSSVEQKVSMKGLKAKPRRALLNSYHDVLASPS*
Ga0070717_102896151	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	YLELADGNIVFLGRARISGNSTVDEHVPLKGLKTKPRRAVANYYDDVLASPN*
Ga0070717_118627292	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PIYLELANGNTVLLGRAKLNGNTSVERKVPLKGVKEKPRRALMNYYDDVLASVN*
Ga0066696_105671492	3300006032	Soil	LELDDGRIVFLGRMRIVGNKSEAAKVPLKGLKAKPRRAMINYYDDVLASPG*
Ga0066652_1010417132	3300006046	Soil	RMLVPIYLELADGRMVSLGRANLTGNTSFEQKVPIKGLKEKPRRALVNYYDDVLASEN*
Ga0075021_101248612	3300006354	Watersheds	MIVPIYLELADGRVANLGRARLVGNSAVDQKVPLKGLKDTPKRALVNYSDDVQASN*
Ga0066658_105762141	3300006794	Soil	VVPIYLELDDSRVVFLGRMRLVGNTSSPAKVPLKGLKTKPRRAIINYLDDVLASPS*
Ga0099830_107796021	3300009088	Vadose Zone Soil	FRMIVPIYLELDDGRIVFLGRMRVVGNSSSPAKVPLKGLKTKPRRALINYYDDVLASPN*
Ga0066709_1007912891	3300009137	Grasslands Soil	LVPIYVETADGRITHLGRARVTGNKSIAEKIPLKGLKDTPKRALLNYYDDVLASN*
Ga0066709_1030128741	3300009137	Grasslands Soil	RMLVPIYLELADGRMVNLGRATLAGNTSMQQKVPIAGLKDKPKRAVLNYYDDVLASN*
Ga0105243_112349241	3300009148	Miscanthus Rhizosphere	LELADGRIVSLGRARLSGNSSIERKLPLNGMKDRPRRALLNYYDDVLASP*
Ga0116119_11980562	3300009629	Peatland	LPVPVYLELADGGIVFLGRARLTGDSSVAQKVPLKGLKAKPKRAMLSYYDDVLASPN*
Ga0116101_11084331	3300009759	Peatland	YLELADGRIVNLGRARVFGSKAVEEKLPLKGLKDAPKRAFLNYYDDVLAAN*
Ga0116219_104649671	3300009824	Peatlands Soil	NVSEHFRMLVPIYFEMADGRTLLLGRARLIGNMTLEQKIPLKGVKEKPRRALVNYFDDVLASAK*
Ga0126380_117316331	3300010043	Tropical Forest Soil	EHFRMLVPIYVETPDGRMVNLGAARMAGNTSVEQKVPLKGLKDTPKRAMLSYYDDVLAVPN*
Ga0126373_105639272	3300010048	Tropical Forest Soil	PIYLELADGNIVFLARAAMTGTKSIEQKVPLRGLKTKPRRVLLNYYDDVLASPG*
Ga0134088_100532464	3300010304	Grasslands Soil	LVPIYLELADGRMVNLGRAHVTGNTSIEQKVPLKGLKDAPKRALLSYYDDVLAAPN*
Ga0134111_101385511	3300010329	Grasslands Soil	PVYLELDDGRIIFLGRLRIVGNSSGTAKVTLKGLKAKPRRALINYYDDVLASPS*
Ga0134062_101364172	3300010337	Grasslands Soil	FRMLVPVYLELDDGRIVFLGRLRLVGNSSAAPKVPLKGLKTKPRRALINYFDDVLASAN*
Ga0074045_105750091	3300010341	Bog Forest Soil	PVYLELADGHVASLGRARLIGNTSVDQKVPLKGLKDAPKRALLNYYDDVLASN*
Ga0126376_114287091	3300010359	Tropical Forest Soil	FRMVVPVYLESDDGRIFFLGRMRMVGNKSEAAKVPLKGLKAKPRRAVINYYDDVLASAS*
Ga0126372_103602013	3300010360	Tropical Forest Soil	KMIVPVYLELDDGKIAFPGRARLIGNSASSPKVPLKGLKAKPKRAMINYYNDVLASPN*
Ga0126378_117798512	3300010361	Tropical Forest Soil	VVPVYLELDDGRIVFLGRMRLVGNKSEAGKVPLKGLKAKPRRALINYFDDVLASPN*
Ga0136449_1041545552	3300010379	Peatlands Soil	PIYLELADGNMFFLGRARVSGNTSIEQKVPLKGLKTKPRRAVVNYYDDVLASPN*
Ga0126383_131620872	3300010398	Tropical Forest Soil	PVYLELADGAVTLLGRARMSGNNSTDQKIPLKGLKTKPRKAILNYYDDVLASPN*
Ga0150983_107664472	3300011120	Forest Soil	LELANGSTTFLGRARLTGSSTFEQKIPLKGVKETPRRAVINYYDDVLASN*
Ga0150983_110299953	3300011120	Forest Soil	SSVDAKFRMLVPIYLELANGNTLFLGRARLSGNSTFEQKIPLKGVKDVPRRALINFYDDVLASPN*
Ga0150983_142893592	3300011120	Forest Soil	LELADGKMFMLGRAKMLGNTTVEQKVPLKGLKTKPKRALVNYYDDVLASPN*
Ga0150983_147435932	3300011120	Forest Soil	PVPIYLEMAEGNMFSLGRAKITGNTSVEQKVPLKGLKTKPRRALINYYDDVLASPN*
Ga0137388_100286495	3300012189	Vadose Zone Soil	LVPIYLELADGHTVSLGRARITGNSSVEKKVPLKGMKDRPRRAVLNYYDDVLASQ*
Ga0137399_100351663	3300012203	Vadose Zone Soil	PVYLELDDGRIVFLGRMRLVGNTSAAPKAPLKGLKAKPRRALINYFDDVLASAN*
Ga0137370_110182531	3300012285	Vadose Zone Soil	MTQSNVNDSFRMLVPIYLELPNGMFFLGRARLAGISTFDQKIALKGLKEKPKRAVISYYDDVLASPN*
Ga0150984_1137092731	3300012469	Avena Fatua Rhizosphere	LELGDGRIMELGRASVVGNSSVDGKVPLKGLKVAPKRAMVNYMDDVLATPN*
Ga0137404_102944143	3300012929	Vadose Zone Soil	VPIYLELADGRTINLGRANITGNTSVEQKVPIKGLKDKPRRALVNYYNDVLASAN*
Ga0126369_102645464	3300012971	Tropical Forest Soil	MLVPIYFEMADGNIVFMGRAHLIGNNAVDQKIPVRGLKTKPRRAIINYYDDVLATPN*
Ga0126369_135171232	3300012971	Tropical Forest Soil	VYLELADGRIVFLGRLHIAGNNSGTAKVPLKGLKDKPRRAMVNYYDDVLASPN*
Ga0134077_102510182	3300012972	Grasslands Soil	VYLELDDGRIVFLGRMRIVGNKSEAAKVPLKGLKAKPRRAMINYYDDVLASPG*
Ga0182014_100426844	3300014491	Bog	IVPIYLELADGRTVYLGRARLLGNASVDQKVPLKGLKDTPKRALVNYYDDVLASN*
Ga0182035_104126702	3300016341	Soil	VPVYVELADGNIAFLGRARLIGNNSVDQKVPLKGLKAKPRRAMVNYYDDVLASPN
Ga0181505_107344213	3300016750	Peatland	MLVPIYLELADGKAYFLGRARLAGNTTVEQKVPLKGLKEKPRRAMINYYDDVLASPS
Ga0187801_101915301	3300017933	Freshwater Sediment	SNVNEHFRMLVPIYFEMADGRTLLLGRARLIGNMTLEQKIPLKGVKEKPRRALVNYFDDVLASAK
Ga0187782_106831021	3300017975	Tropical Peatland	MLVPIYLERDDGKTLLLGRARLAGNRSVEQKVPLKGLKTKPRRAVLNYYDDVLASPN
Ga0187782_116519382	3300017975	Tropical Peatland	DDKFRMLVPLYLELADGRIFFLGRASMMGNHSIEQKIPLKGLKTKPRAAVLNYYDDVLAAPN
Ga0187816_102668571	3300017995	Freshwater Sediment	MIVPIYLELADGRTMHLGRARLVGNIVADQKVPLKGLKDTPKRALLNYYDDVLASN
Ga0187872_102319302	3300018017	Peatland	PIYLELADGRTVNLGRARLVGNSSVDQKVPLKGWKDAPKRVLVNYNDDVLASN
Ga0187883_106341442	3300018037	Peatland	MLVPIYLELAEGGMAFLGRARLNGNNSLGQKVPLKGLKAKPRRALLNYYDDVLASPN
Ga0187784_112600741	3300018062	Tropical Peatland	FHMLVPIYLELADGNMFFLGRAKMTGNSSVDQKVPLKGLKTKPRRAVLNYYDDVLASPN
Ga0187771_106491842	3300018088	Tropical Peatland	YLELDDGRIVALGRVRMLGATTNSEKVPLKGLKNRPRRAMINYYYDVLASPN
Ga0187770_102068451	3300018090	Tropical Peatland	MLVPVYLEMADGKVIFLGRAGITGNNSYAQKIPLKGVKATPRRVALNYYDDVLASPN
Ga0187770_115335092	3300018090	Tropical Peatland	VYLELADGNMFFLGRARLTGNNSISQKIPLKGLKTTPRRATLNYYDDVLASPN
Ga0066655_101676811	3300018431	Grasslands Soil	IYLELADGRMVNLGRAHVTGNTSIEQKVPLKGLKDAPKRALLSYYDDVLAAPN
Ga0210407_100296871	3300020579	Soil	LVPIYLELANGTTSFLGRARLSGNSTFEQKIPLKGMKDVPRRAVMNYYDDVLASPN
Ga0210395_109618001	3300020582	Soil	KRRFPNAVPIYFELAHGHPVFVGRARLAGDSSVEQKVSMKGLKAKPRRALLNSYHDVLASPS
Ga0210400_103570831	3300021170	Soil	DSFRMLVPIYVDLPNGMLFLGRARLAGNSTFDQKIPLKGLKDKPKRAVINYYDDVLASPN
Ga0210400_112558612	3300021170	Soil	MLVPIYIELADGRTINLGRARMVGNTTVEQKVPIKGLKERPHRAILNYMDDVLASN
Ga0210388_100148122	3300021181	Soil	VPIYFELAHGHPVFVGRARLAGDSSVEQKVSMKGLKAKPRRALLNSYHDVLASPS
Ga0210384_101936782	3300021432	Soil	SFRMLVPMYMELADGHVVSLGRATIIGNSSLDGKIPLKGLKDMPHRAMLNYYDDVLASPN
Ga0210390_116548091	3300021474	Soil	VKDDFHMLVPIYLELAEGGMFFLGRARITGNNTVEQKVPLKGLKTKPRRAVVNYYDDVLASAN
Ga0210409_112066141	3300021559	Soil	PIYLELANGTTSFLGRARLSGNSTFEQKIPLKGMKDVPRRAVMNYYDDVLASPN
Ga0242641_10048862	3300022499	Soil	VVMSIKMTQSNVNDSFRMLVPIYVDLPNGMLFLGRARLAGNSTFDQKIPLKGLKDKPKRAVINYYDDVLASPN
Ga0242650_10039512	3300022503	Soil	PLYIELADGNVRFLGRARLTGNTSLEQKIPLKGLKDKPHRVLVNYYDDVLASSN
Ga0242663_10879862	3300022523	Soil	YLEMADGRTFPLGRARLTGNTTLEQKIPLKGIKDKPRRAVVNYFDDVLASAK
Ga0242655_100684172	3300022532	Soil	KFRMLVPIYLELANGNTLFLGRARLSGNSTFEQKIPLKGVKDVPRRALINFYDDVLASPN
Ga0207692_109194712	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VPLYLELADGAIYFLGRARMAGNTTVEQKIPLKGLKEKPRRAMLNYYDDVLASPN
Ga0207680_110681781	3300025903	Switchgrass Rhizosphere	YLELADGRIVSLGRARLSGNSSIERKLPLNGMKDRPRRALLNYYDDVLASP
Ga0207646_109785641	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YLELADGRVANLGRARLTGNTSVDKKVPLKGLKDTPKRALLNYNDDVLASN
Ga0209863_102540611	3300026281	Prmafrost Soil	GVDDKFRMLVPVYLELANGSIAFLGRVRLVGNNSNEAKVPLKGIKDTPRRAMLNYYDDILASPN
Ga0209235_11495541	3300026296	Grasslands Soil	PVYLELDDGKIFFLGRARLVGNSSVAPKVPLKGLKAKPRRALINYYDDVLASPN
Ga0209268_10534863	3300026314	Soil	PIYLELADGRIVNLGRARVMGNTSVEQKVPLKGLKDAPKRALLSYYDDVLAAPN
Ga0209221_10774432	3300027609	Forest Soil	LVPIYFEMADGTMFFLGRARITGNKTIEQKVPLKGMKAKPRRAVLNYNDDVLASPN
Ga0209773_100024694	3300027829	Bog Forest Soil	LVPIYFELADGRIVMLGRARLYGPTAVEQKVPLKGVKTAPKRALLNYYDDVLASPN
Ga0209274_102422042	3300027853	Soil	PVPIYFELADGNIAFVGRAKVTGNSSMEQKVPMKGLKAKPRRALLSYYDDVLASPN
Ga0209693_101981722	3300027855	Soil	IYLELADGGMLFLGRARFSGNNSVEQKVPLKGLKAKPRRAVLNYYDDVLASPN
Ga0209283_107791891	3300027875	Vadose Zone Soil	IYLELADGRTVNLGRARLAGNTSVEQKVPIRGLRERPKRALLNYYDGVLASPN
Ga0209068_106229351	3300027894	Watersheds	FLDGGSCLRMIVPIYLELADGRVANLGRARLVGNSAVDQKVPLKGLKDTPKRALVNYSDDVQASN
Ga0265356_10142772	3300028017	Rhizosphere	MTQSNVNDSFRMLVPIYVELTNGMFFLGRAQLTGNSTFDQKIPLRGLKETPKRAVISYYDDVLALPN
Ga0308309_1000539410	3300028906	Soil	SPELADGGMFFLGRARLTGNKSIEQKVPLKGVKAKPRRAVLNYYDDVLASPN
Ga0265460_105280211	3300030740	Soil	LELADGGMFFLGRGRLAGNKSVEQKVPLKGLKAKPRRAVLNYYDDVLASPN
Ga0265461_103416093	3300030743	Soil	FTLFFLFFFTFRMLVPIYLELPNGMFFLGRARLTGNSTFDQKIPLKGLKDKPKRAVINYYDDVLASPN
Ga0265740_10383861	3300030940	Soil	IYLELAEGGMYSLGRARLTGNNSVEQKVPIKGLKTKPRRAVINYYDDVLASPN
Ga0170834_1015814531	3300031057	Forest Soil	MLVPIYLEMADGRTLFLGRGRLIGNSTLEQKIPLNGVKEKPRRALVNYFDDVLASAK
Ga0170822_117858242	3300031122	Forest Soil	LYFEFADGHVAQIGRVTLVGNSSQEGKLPLKGLKDIPRRALVNYYDDVLASPN
Ga0170824_1185853282	3300031231	Forest Soil	LELADGNIVFLGRARIAGNSSIDEKIPIKGLKTKPRRAIANYYDDILASPN
Ga0170824_1212978072	3300031231	Forest Soil	VNENFRMLVPLYIELADGNVRFLGRARMTGNTSIEQKIPLKGLKDKPHRLLVNYYDDVLASAN
Ga0170824_1227930652	3300031231	Forest Soil	LYLELADGRVVNFGRVTLVGNASQDGKIPLTGLKDIPHRAMVNYYDDVLASN
Ga0307475_114839061	3300031754	Hardwood Forest Soil	EFSMLVPIYLELADGNTTFVGRAKLTGNSSMEQKVPLKGLKTKPRRAVLSYYDDVLAASN
Ga0307473_111196671	3300031820	Hardwood Forest Soil	MLVPIYLELADGRTVTLGRANLTGNTSFEQKVPIKGLKEKPRRALVNYYDDVLASDN
Ga0306925_106526472	3300031890	Soil	VYVELADGNIAFLGRARLIGSGSVDQKVPLKGLKTKPRRAMVNYYDDVLASPN
Ga0307479_103648263	3300031962	Hardwood Forest Soil	FRMLVPIYFELADGRMVMLGHVRIAGNSTAEQKVPLKGLKDKPRRALINYMDDVLASN
Ga0335079_108541201	3300032783	Soil	MVPIYLETQEGNMLFLGRVRMVGNDTIQQSLPLKGLKNKPRRALLNYYDDVLASPN
Ga0335079_112441561	3300032783	Soil	DFVMSFKVTQSNVNDKFSMLVPLYLELADGNVVSLGRARIIGNSFLEQKVPLKGVKARPRRLMVNYYDDVLASAN
Ga0335078_100168781	3300032805	Soil	RMLVPLYLELANEQTTFVGRARLIGNSSFELKVPLKGVKDRPRSAMLNFNDDVLAASK
Ga0335076_108559323	3300032955	Soil	FRMVVPIYLEMADGNMLFLGRIRMVGNDSIEQKVPIKGLKTKPKAAVLNYYDDVLASPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095581

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences