Metagenome Family F095552

Basic Information
Family ID	F095552
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	70 residues
Representative Sequence	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGDEGADGGAP
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.90 %
% of genes near scaffold ends (potentially truncated)	13.33 %
% of genes from short scaffolds (< 2000 bps)	84.76 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (92.381 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (11.429 % of family members)
Environment Ontology (ENVO)	Unclassified (32.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.02% β-sheet: 0.00% Coil/Unstructured: 48.98%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00072	Response_reg	40.95
PF00080	Sod_Cu	26.67
PF00486	Trans_reg_C	11.43
PF00282	Pyridoxal_deC	6.67
PF03450	CO_deh_flav_C	2.86
PF01063	Aminotran_4	0.95
PF00221	Lyase_aromatic	0.95
PF12867	DinB_2	0.95
PF02518	HATPase_c	0.95
PF00512	HisKA	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	26.67
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	6.67
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.90
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.38 %
Unclassified	root	N/A	7.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.38 %
Unclassified	root	N/A	7.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.38 %
Unclassified	root	N/A	7.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.10 %
Unclassified	root	N/A	7.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.10 %
Unclassified	root	N/A	7.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	7.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	7.62 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	7.62 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.10 %
Unclassified	root	N/A	7.62 %
Cupriavidus necator	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus necator	0.95 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003861\|Ga0031654_10122344	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300004024\|Ga0055436_10044839	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300004114\|Ga0062593_100301601	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300004114\|Ga0062593_100473637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300004282\|Ga0066599_100386210	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300004633\|Ga0066395_10713179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300004633\|Ga0066395_10833517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005328\|Ga0070676_10251303	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005330\|Ga0070690_100536966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300005332\|Ga0066388_100230646	All Organisms → cellular organisms → Bacteria	2484	Open in IMG/M
3300005332\|Ga0066388_100992691	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300005332\|Ga0066388_102586269	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005335\|Ga0070666_11016733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300005343\|Ga0070687_101520497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005356\|Ga0070674_101530216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005364\|Ga0070673_100908482	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005365\|Ga0070688_100064664	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005457\|Ga0070662_100445699	All Organisms → cellular organisms → Bacteria → Proteobacteria	1074	Open in IMG/M
3300005459\|Ga0068867_102007505	Not Available	547	Open in IMG/M
3300005518\|Ga0070699_102070647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005543\|Ga0070672_100202447	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300005615\|Ga0070702_101110955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300005617\|Ga0068859_101227383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300005618\|Ga0068864_101076171	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005713\|Ga0066905_101908412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005764\|Ga0066903_100444568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2162	Open in IMG/M
3300005764\|Ga0066903_100458821	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300005764\|Ga0066903_100645815	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300005764\|Ga0066903_102999701	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300005841\|Ga0068863_101344902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300006358\|Ga0068871_100180931	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300006852\|Ga0075433_10000904	All Organisms → cellular organisms → Bacteria	20886	Open in IMG/M
3300006854\|Ga0075425_100061431	All Organisms → cellular organisms → Bacteria	4216	Open in IMG/M
3300006871\|Ga0075434_102095705	Not Available	570	Open in IMG/M
3300006871\|Ga0075434_102172007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300006904\|Ga0075424_100015450	All Organisms → cellular organisms → Bacteria → Proteobacteria	7712	Open in IMG/M
3300006931\|Ga0097620_100733532	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300009870\|Ga0131092_10012502	All Organisms → cellular organisms → Bacteria	14556	Open in IMG/M
3300010043\|Ga0126380_12138465	Not Available	516	Open in IMG/M
3300010361\|Ga0126378_11009766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → Cupriavidus necator	935	Open in IMG/M
3300010362\|Ga0126377_10479683	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300010366\|Ga0126379_13527978	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010391\|Ga0136847_12477609	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010397\|Ga0134124_12449638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010398\|Ga0126383_11637202	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300010398\|Ga0126383_13389119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300010937\|Ga0137776_1595111	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300011119\|Ga0105246_11656128	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012908\|Ga0157286_10356413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012971\|Ga0126369_10884825	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300012971\|Ga0126369_11304273	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300014324\|Ga0075352_1042463	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300015090\|Ga0167634_1017934	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300017927\|Ga0187824_10023786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300017937\|Ga0187809_10121387	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300017947\|Ga0187785_10076132	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300017959\|Ga0187779_10125092	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300018060\|Ga0187765_11156754	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300018084\|Ga0184629_10003678	All Organisms → cellular organisms → Bacteria	5715	Open in IMG/M
3300021081\|Ga0210379_10432882	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021403\|Ga0210397_10621331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300021432\|Ga0210384_11692657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300021445\|Ga0182009_10028581	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300022886\|Ga0247746_1121772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300023072\|Ga0247799_1018894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300025903\|Ga0207680_10574910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300025905\|Ga0207685_10640283	Not Available	574	Open in IMG/M
3300025925\|Ga0207650_10900890	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300025933\|Ga0207706_10125138	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300025933\|Ga0207706_11341205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300025938\|Ga0207704_10119734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1799	Open in IMG/M
3300026102\|Ga0208914_1025910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300027874\|Ga0209465_10297479	Not Available	809	Open in IMG/M
3300027874\|Ga0209465_10347127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300027902\|Ga0209048_10005573	All Organisms → cellular organisms → Bacteria	11876	Open in IMG/M
3300028380\|Ga0268265_11463970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300028381\|Ga0268264_10319208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1468	Open in IMG/M
3300028802\|Ga0307503_10025488	All Organisms → cellular organisms → Bacteria → Proteobacteria	2011	Open in IMG/M
3300030336\|Ga0247826_11493822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031170\|Ga0307498_10171435	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300031226\|Ga0307497_10643733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300031366\|Ga0307506_10459574	Not Available	532	Open in IMG/M
3300031543\|Ga0318516_10393341	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300031720\|Ga0307469_10381993	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031736\|Ga0318501_10785933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300031740\|Ga0307468_101846629	Not Available	574	Open in IMG/M
3300031834\|Ga0315290_10612627	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300031890\|Ga0306925_10738040	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300031896\|Ga0318551_10786230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031912\|Ga0306921_11567025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300031997\|Ga0315278_11865722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300032065\|Ga0318513_10498601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300032177\|Ga0315276_11140081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300032205\|Ga0307472_100662751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300032205\|Ga0307472_101463989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300032261\|Ga0306920_101453486	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032828\|Ga0335080_10339668	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300032829\|Ga0335070_10002859	All Organisms → cellular organisms → Bacteria	20076	Open in IMG/M
3300032954\|Ga0335083_10243223	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300032955\|Ga0335076_10011778	All Organisms → cellular organisms → Bacteria	8801	Open in IMG/M
3300032955\|Ga0335076_10961459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300033004\|Ga0335084_10509082	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300033004\|Ga0335084_12289480	Not Available	522	Open in IMG/M
3300033433\|Ga0326726_10004713	All Organisms → cellular organisms → Bacteria	12442	Open in IMG/M
3300034176\|Ga0364931_0180556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.24%
Host-Associated	Host-Associated	23.81%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.86%
Plants	Host-Associated → Plants	23.81%
Aquatic	Environmental → Aquatic	12.38%
Wastewater	Engineered → Wastewater	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.24%
Freshwater	Environmental → Aquatic → Freshwater	9.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.62%
Marine	Environmental → Aquatic → Marine	0.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%
Sediment	Environmental → Aquatic → Sediment	0.95%
Peat	Environmental → Terrestrial → Peat	0.95%
Floodplain	Environmental → Terrestrial → Floodplain	0.95%
Roots	Host-Associated → Plants → Roots	0.95%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.38%
Loam	Environmental → Terrestrial → Soil → Loam	17.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.71%
Lake	Environmental → Aquatic → Freshwater → Lake	3.81%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.95%
Pond	Environmental → Aquatic → Freshwater → Pond	0.95%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.95%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.95%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.95%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.81%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.95%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.95%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.95%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.95%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.95%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.95%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026102	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031654_101223442	3300003861	Freshwater Lake Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVATPQPTSSFAAGFAVGAGAVFVLSFLQTPRPPRSGEGGV*
Ga0055436_100448392	3300004024	Natural And Restored Wetlands	MIPSLPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFGAGVAVGAGSVFVLSFLRERRPPRSDEER*
Ga0062593_1003016012	3300004114	Soil	MLPTVPPVAVSRPLLFGLVAVGAVVAVTASQPTSSFAAGFAAGAGSAFVVSFMKAPRRRATGSDEPPGGEP*
Ga0062593_1004736372	3300004114	Soil	MLPPVPPVAVSRPLLFGLVAVGAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP*
Ga0066599_1003862101	3300004282	Freshwater	MIPPVPPIAVSRPLLFGLLAAGAIVAVAAPQPTSSFAAGFAAGAGSVFVLSFVRHSRGGPEDPAGPDGEEP*
Ga0066395_107131791	3300004633	Tropical Forest Soil	MIPLVPPLEVSRPLLMGLLIVGAIVALVTPQPTSSFAAGFVVGAGSVFVVSFVRSRRPEGPVDDGGGGGA*
Ga0066395_108335172	3300004633	Tropical Forest Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVTAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGDEGGADGSAS*
Ga0070676_102513032	3300005328	Miscanthus Rhizosphere	MLPTVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0070690_1005369661	3300005330	Switchgrass Rhizosphere	MLPVVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0066388_1002306462	3300005332	Tropical Forest Soil	MMPRVPPIAVSRPLLFGLLAAGAVGALTLPQPHSSFAAGFAAGSGAVFVISFMKNRRREPDDEAIR*
Ga0066388_1009926913	3300005332	Tropical Forest Soil	MIPRVPPIAVSRPLLFGLVAAGAIGALALPEPHSSFAAGFAAGAGAVFVLSFMKGRRREPDDEAIR*
Ga0066388_1025862692	3300005332	Tropical Forest Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFLKSSRAPEPGGGGDAESR*
Ga0070666_110167332	3300005335	Switchgrass Rhizosphere	SSSKIKAAIIPASEPMLPAVPPVAVSRPLLFGLVAVGAVVAVVTPQPTSSFAAGFAAGAGSAFVVSFMRTSRGERFGDSDDRPGDGT*
Ga0070687_1015204972	3300005343	Switchgrass Rhizosphere	VSRPLLFGLVAVGAVVAVASSQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0070674_1015302161	3300005356	Miscanthus Rhizosphere	MIPPVPPIAVSRPLLFGLLAAGAIVAVAAPQPTSSFAAGFAAGAGSVFVLSFVRTPRGGPEDPAGPDREEP*
Ga0070673_1009084822	3300005364	Switchgrass Rhizosphere	MLPVVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMRTSRHERFGDSEDRSGDGS*
Ga0070688_1000646642	3300005365	Switchgrass Rhizosphere	MLPAVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0070662_1004456992	3300005457	Corn Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMRTSRHERFGDSEDRSGDGS*
Ga0068867_1020075052	3300005459	Miscanthus Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERFGDSDDRSGDGS*
Ga0070699_1020706472	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RVPPIAVSRPLLFGLVAAGAIAAITLREPHSSFAAGFAAGAGAVFVLSFLKGRRGPGEEELR*
Ga0070672_1002024471	3300005543	Miscanthus Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERFGDS
Ga0070702_1011109552	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASSQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0068859_1012273831	3300005617	Switchgrass Rhizosphere	LPPVPPVAVSRPLLFGLVAVGAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP*
Ga0068864_1010761712	3300005618	Switchgrass Rhizosphere	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPRPPAEGPGPDEASR*
Ga0066905_1019084122	3300005713	Tropical Forest Soil	MIPKVPPIAVSRPLLFGLLAAGAIGAVALPQPHSSFAAGFAAGSGAVFVLSFMKGRRREPDDEAIR*
Ga0066903_1004445683	3300005764	Tropical Forest Soil	MMPRVPPIAVSRPLLFGLVAAGAIGALALPEPHSSFAAGFAAGSGAVFVLSFMKGRRREPDDEAIR*
Ga0066903_1004588213	3300005764	Tropical Forest Soil	MIPSVPPVAVSRPLLFGLLAVGAVVAVTASQPTASFAAGFACGAGSVFVLSFLKGSRSASSEEGGGEAR*
Ga0066903_1006458153	3300005764	Tropical Forest Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGDEGADGGAP*
Ga0066903_1029997012	3300005764	Tropical Forest Soil	MIPPVPPLEVSRPLLLGLLIVGAVVALVTPQPTSSFAAGFVVGAGSVFVVSFVRSRRPEGPADDGGGGGA*
Ga0068863_1013449022	3300005841	Switchgrass Rhizosphere	MLPAVPPVAVSRPLLFGLVAVGAVVAVVTPQPTSSFAAGVAAGAGSAFVVSFMRTSRHDRFGDSDDRPGDGS*
Ga0068871_1001809313	3300006358	Miscanthus Rhizosphere	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPRPPAEGPGQDEASR*
Ga0075433_1000090415	3300006852	Populus Rhizosphere	MILKVPPIAVSRPLLFGLVAAGAIGAIALPQPHSSFAAGFAAGSGAVFVLSFMKGRRREPDDEAIR*
Ga0075425_1000614314	3300006854	Populus Rhizosphere	MIPSVPPIEVSRPLLLGLLAVGAIVAVAAPQPTSSFAAGFAAGAGSVFIVSFMKTRRGEPGPEDGGGDGA*
Ga0075434_1020957052	3300006871	Populus Rhizosphere	MIPSVPPIEVSRPLLLGLLAVGAIVAVAAPQPTSSFAAGFAAGAGSVFIVSFMKSRRGEPGPEDRGGDGA*
Ga0075434_1021720072	3300006871	Populus Rhizosphere	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKSPRPPADGPGPDEGSR*
Ga0075424_10001545010	3300006904	Populus Rhizosphere	MIPKVPPIAVSRPLLFGLVAAGAIGAIALPQPHSSFAAGFAAGSGAVFVLSFMKGRRREPDDEAIR*
Ga0097620_1007335322	3300006931	Switchgrass Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS*
Ga0131092_1001250210	3300009870	Activated Sludge	MIPTVPPIAVSRPLLFGFLAAGAVVAVAAPQPTSSFAAGFAVGAGSVFVVSFLRTPREPRSGDGAGGGEP*
Ga0126380_121384651	3300010043	Tropical Forest Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVTAPQPTSSFAAGFAAGAGSVFVLSFLKSSRAPEPGGGGDAESR*
Ga0126378_110097662	3300010361	Tropical Forest Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAIVAPQPTSSFAAGFAVGAGSVFVISFLKTSRDGRGSESGADGSAP*
Ga0126377_104796832	3300010362	Tropical Forest Soil	MMPRVPPIAVSRPLLFGLVAAGAIGALALPQPHSSFAAGFAAGSGAVFVLSFMKGRRREPDDEAIR*
Ga0126379_135279781	3300010366	Tropical Forest Soil	MIPSVPPVAVSRPLLFGLLAVGAVVAVTASQPTASFAAGFACGAGSVFVLSFLKGSRSASSESDATTR
Ga0136847_124776092	3300010391	Freshwater Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSTFAAGFAAGAGSVFVLSFMKPPRSPDESPGPEEGPR*
Ga0134124_124496381	3300010397	Terrestrial Soil	MLPLVPPVAVSRPLLFGLVAVGAVVAVASQQPTSSFAAGFAAGAGSAFIVSFMKTSRHERFGDSGDRPGDGS*
Ga0126383_116372022	3300010398	Tropical Forest Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVISFLKTSRDGPANEGADREAP*
Ga0126383_133891192	3300010398	Tropical Forest Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGNESGADGSAP*
Ga0137776_15951111	3300010937	Sediment	MIPSVPPISVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFLKTSRDGRGSEGGADGGAP*
Ga0105246_116561282	3300011119	Miscanthus Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSD
Ga0157286_103564131	3300012908	Soil	MLPPVPPVAVSRPLLFGLVAVGDVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP*
Ga0126369_108848252	3300012971	Tropical Forest Soil	MIPPVPPLEVSRPLLMGLLIVGAIVALVTPQPTSSFAAGFVVGAGSVFVVSFVRTRRPEGPVDDGGGGGA*
Ga0126369_113042732	3300012971	Tropical Forest Soil	MIPTVPPIAVSRPLLFGLVAVGAIVAVATQQPTSSFAAGFAAGAGSAFVVSFMKTPRHDRGGDADGGSGDGA*
Ga0075352_10424632	3300014324	Natural And Restored Wetlands	MISSVPPIAVSRPLLFGLLAAGAVVAVVAPQPTSSFAAGFAAGAGSVFVLSFLKTPRPPRPGDSASGGEP*
Ga0167634_10179342	3300015090	Glacier Forefield Soil	MIPAVPPIAVSRPLLFGLMAAGAIIAVATPQPTSSFAAGFAVGAGSVFVISFMKNPRPGRGDGARPAAGEDEP*
Ga0187824_100237862	3300017927	Freshwater Sediment	MIPTVPPIEVSRPLLLGLLAVGAIVAVAAPQPTSSFAAGFAAGAGSVFIVSFMKTRRGEPGPEDPGGDGA
Ga0187809_101213872	3300017937	Freshwater Sediment	MIPPVPPIEVSRPLLLGLLAVGAIVAVTAPQPTSSFAAGFAAGAGSVFIVSFMKTRRGEPGPEDHGGDGP
Ga0187785_100761322	3300017947	Tropical Peatland	MIPTVPPIEVSRPLLLGLLAVGAIVAFAAPQPTSSFAAGFAAGAGSVFILSFMKSRREEPGPKDRGGDGA
Ga0187779_101250922	3300017959	Tropical Peatland	MIPSVPPIVVSRTLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFLKTARDGRGSEEAGGGAE
Ga0187765_111567541	3300018060	Tropical Peatland	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVLSFLKTARERGSEGADRGAP
Ga0184629_100036786	3300018084	Groundwater Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKTPRPPEEGPGPEESPR
Ga0210379_104328822	3300021081	Groundwater Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKTPRPPDEGPGPEESPR
Ga0210397_106213312	3300021403	Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVLSFLKTSRDGGGSEGSDGGAP
Ga0210384_116926572	3300021432	Soil	MIPHVPPIAVSRPLLFGLVAVGAIAAVASPPPTSSFAAGFAAGAGAVFVISFMKNPRDAGGRASNGDGENP
Ga0182009_100285812	3300021445	Soil	MLPPVPPVAVSRPLLFGLVAVGAVVAVTAPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGGSPEPDDHPGDPQ
Ga0247746_11217722	3300022886	Soil	VSRPLLFGLVAVGAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP
Ga0247799_10188942	3300023072	Soil	MLPPVPPVAVSRPLLFGLVAVGAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP
Ga0207680_105749102	3300025903	Switchgrass Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS
Ga0207685_106402831	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPQPPA
Ga0207650_109008902	3300025925	Switchgrass Rhizosphere	MIPAVPPIVVSRPLLFGLLAVGAVVSVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPRPPAEGPGPDEASR
Ga0207706_101251383	3300025933	Corn Rhizosphere	MLPPVPPVAVSRPLLFGLVAVRAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPEP
Ga0207706_113412052	3300025933	Corn Rhizosphere	MLPVVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMRTSRHERFGDSEDRSGDGS
Ga0207704_101197342	3300025938	Miscanthus Rhizosphere	MLPVVPPVAVSRPLLFGLVAVGAVVAVASPQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS
Ga0208914_10259102	3300026102	Natural And Restored Wetlands	MISSVPPIAVSRPLLFGLLAAGAVVAVVAPQPTSSFAAGFAAGAGSVFVLSFLKTPRPPRPGDSASGGEP
Ga0209465_102974792	3300027874	Tropical Forest Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVTAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGDEGGADGSAS
Ga0209465_103471272	3300027874	Tropical Forest Soil	MIPLVPPLEVSRPLLMGLLIVGAIVALVTPQPTSSFAAGFVVGAGSVFVVSFVRSRRPEGPVDDGGGGGA
Ga0209048_1000557311	3300027902	Freshwater Lake Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVATPQPTSSFAAGFAVGAGAVFVLSFLQTPRPPRSGEGGV
Ga0268265_114639701	3300028380	Switchgrass Rhizosphere	SRPLLFGLVAVGAVVAVATPQPTSSFAAGFAAGAGSAFVVSFMKTPRRGGSPQSDDRGPE
Ga0268264_103192082	3300028381	Switchgrass Rhizosphere	MLPVVPPVSVSRPLLFGLVAVGAVVAVASSQPTSSFAAGFAAGAGSAFIVSFMKTSRHERLGDSDDRSGDGS
Ga0307503_100254882	3300028802	Soil	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSAFAAGFAAGAGSVFVLSFMKAPRPPADGPGPDEASR
Ga0247826_114938222	3300030336	Soil	MIPPVPPIAVSRPLLFGLLAAGAIVAVAAPQPTSSFAAGFAAGAGSVFVLSFVRTPRGGPEDPAGPDREEP
Ga0307498_101714352	3300031170	Soil	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKSPRPPADGPGPDEASR
Ga0307497_106437332	3300031226	Soil	MIPSVPPVSVSRPLLFGLLAVGAVVAVTASQPTASFAAGFACGAGSVFVLSFLRGSRSARSGGEGETP
Ga0307506_104595742	3300031366	Soil	MIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPRPPADGPGPDEASR
Ga0318516_103933412	3300031543	Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGPGNEGADREAP
Ga0307469_103819933	3300031720	Hardwood Forest Soil	MIPSMPPVAVSRPLLFGLLAVGAVVAVTASQPTASFAAGFACGAGSVFVLSFLKGSRSASSDEGGGETR
Ga0318501_107859331	3300031736	Soil	RASMIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGPGNEGADREAR
Ga0307468_1018466291	3300031740	Hardwood Forest Soil	MIPSMPPVAVSRPLLFGLLAVGAVVAVTASQPTASFAAGFACGAGSVFVLSFLKGSRSASSDEGGGETS
Ga0315290_106126272	3300031834	Sediment	MIPSVLPIAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVLSFMKTPRSPDERAGPEEGPR
Ga0306925_107380402	3300031890	Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTPRDGRGNEDADGGAP
Ga0318551_107862302	3300031896	Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGPGNEGADREAR
Ga0306921_115670252	3300031912	Soil	SVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTPRDGRGNEDADGGAP
Ga0315278_118657222	3300031997	Sediment	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGAVFVLSFMKTPRPPDEGPGPQEDSR
Ga0318513_104986012	3300032065	Soil	MIPTVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTPRDGRGNEDADGGAP
Ga0315276_111400811	3300032177	Sediment	MILAVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSTFAAGFAAGAGSVFVLSFMKTPRPPGEGPGPEEGPR
Ga0307472_1006627511	3300032205	Hardwood Forest Soil	YPRRSSMIPAVPPIVVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFMKAPRPPAEGPGPDEASR
Ga0307472_1014639891	3300032205	Hardwood Forest Soil	PVPPVAVSRPLLFGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVLSFMKTPRTPSDGPEPGEDPR
Ga0306920_1014534862	3300032261	Soil	MIPSVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVISFLKTSRDGRGNEGADGGTP
Ga0335080_103396682	3300032828	Soil	MIPNVPPIAVSRPLLFGLLAVGAVVAVAAPQPTSSFAAGFAAGAGSVFVLSFLKAPRGGRGSEGGTDGSAE
Ga0335070_1000285913	3300032829	Soil	MISTSTMPTVPPIAVSRPLLMGLLAAGALVAIAAPQPTSSFAAGFAVGAGTVFVVSFVKTRRPEPESGENGEDLG
Ga0335083_102432232	3300032954	Soil	MPTVPPIAVSRPLLMGLLAAGAIVAVAAPQPTSSFAAGFAVGAGTVFVVSFVKTRRPEPEPGDGGDAGEERP
Ga0335076_100117787	3300032955	Soil	MIPPVPPIEVSRPLLLGLLAVGAIVAVTAPQPTSSFAAGFAAGAGSVFVVSFMKTRRGEPGPEDHRGDGA
Ga0335076_109614592	3300032955	Soil	MIPTVPPIEVSRPLLLGLLAVGAIVAVAAPQPTSSFAAGFAAGAGSVFVVSFMKSRRGEPGPEDGGEDGA
Ga0335084_105090822	3300033004	Soil	MMPSVPPIEVSRPLLLGLLAVGAIVAVTAPQPTSSFAAGFAAGAGSVFIVSFMKTRRGEPGPEDRGGDGA
Ga0335084_122894802	3300033004	Soil	MIPSVPPIVVSRPLLLGLLAVGAVVAVAAPPPTSSFAAGFAAGAGSVFVVSFLKTPRSAGPGEGPSDRLEEP
Ga0326726_100047137	3300033433	Peat Soil	MIPSVPPVAVSRPLLFGLLAAGAVVAVATPQPTSSFAAGFAVGAGAVFVVSFMATPRRPRSGEGGGGDGP
Ga0364931_0180556_188_397	3300034176	Sediment	MIPAVPPVAVSRPLLFGLLAVGAVVAIAAPPPTSSFAAGFAAGAGSVFVLSFMKSPRPPADGSAPEDPL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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