NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095543

Metagenome Family F095543

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095543
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 63 residues
Representative Sequence MADEHANTDSEITEAVRILKSKIPPADHAALDSRLQDLINDPSTDDDDVITILRSEFDPD
Number of Associated Samples 88
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.57 %
% of genes near scaffold ends (potentially truncated) 21.90 %
% of genes from short scaffolds (< 2000 bps) 90.48 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (53.333 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(26.667 % of family members)
Environment Ontology (ENVO) Unclassified
(47.619 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.762 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.59%    β-sheet: 0.00%    Coil/Unstructured: 53.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13620CarboxypepD_reg 6.67
PF03466LysR_substrate 5.71
PF13476AAA_23 3.81
PF02518HATPase_c 3.81
PF02082Rrf2 2.86
PF03465eRF1_3 2.86
PF00501AMP-binding 1.90
PF04226Transgly_assoc 1.90
PF12543DUF3738 1.90
PF00587tRNA-synt_2b 0.95
PF01527HTH_Tnp_1 0.95
PF02416TatA_B_E 0.95
PF00753Lactamase_B 0.95
PF01553Acyltransferase 0.95
PF13520AA_permease_2 0.95
PF07589PEP-CTERM 0.95
PF13304AAA_21 0.95
PF03965Penicillinase_R 0.95
PF02806Alpha-amylase_C 0.95
PF00266Aminotran_5 0.95
PF11154DUF2934 0.95
PF13360PQQ_2 0.95
PF04972BON 0.95
PF16576HlyD_D23 0.95
PF02754CCG 0.95
PF01739CheR 0.95
PF00902TatC 0.95
PF03681Obsolete Pfam Family 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2524Predicted transcriptional regulator, contains C-terminal CBS domainsTranscription [K] 2.86
COG0640DNA-binding transcriptional regulator, ArsR familyTranscription [K] 2.86
COG2378Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domainsTranscription [K] 2.86
COG1414DNA-binding transcriptional regulator, IclR familyTranscription [K] 2.86
COG1725DNA-binding transcriptional regulator YhcF, GntR familyTranscription [K] 2.86
COG2188DNA-binding transcriptional regulator, GntR familyTranscription [K] 2.86
COG1959DNA-binding transcriptional regulator, IscR familyTranscription [K] 2.86
COG2186DNA-binding transcriptional regulator, FadR familyTranscription [K] 2.86
COG1352Methylase of chemotaxis methyl-accepting proteinsSignal transduction mechanisms [T] 1.90
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 1.90
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.95
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.95
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.95
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 0.95
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 0.95
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 0.95
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 0.95
COG0805Twin-arginine protein secretion pathway component TatCIntracellular trafficking, secretion, and vesicular transport [U] 0.95
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 0.95
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms54.29 %
UnclassifiedrootN/A45.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100823391All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus6164Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_105699857All Organisms → cellular organisms → Bacteria2589Open in IMG/M
3300005172|Ga0066683_10421564Not Available822Open in IMG/M
3300005293|Ga0065715_10951801Not Available559Open in IMG/M
3300005294|Ga0065705_11022318Not Available541Open in IMG/M
3300005330|Ga0070690_101445665All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300005340|Ga0070689_100278345All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1387Open in IMG/M
3300005341|Ga0070691_10832346Not Available564Open in IMG/M
3300005367|Ga0070667_100890527All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300005367|Ga0070667_102320069All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300005434|Ga0070709_10269852All Organisms → cellular organisms → Bacteria → Proteobacteria1233Open in IMG/M
3300005444|Ga0070694_100706056All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300005561|Ga0066699_11140817Not Available536Open in IMG/M
3300005610|Ga0070763_10748190All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300005617|Ga0068859_101511420All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005617|Ga0068859_102004549Not Available639Open in IMG/M
3300005617|Ga0068859_102594739Not Available557Open in IMG/M
3300005719|Ga0068861_100200091All Organisms → cellular organisms → Bacteria1676Open in IMG/M
3300005843|Ga0068860_102178492Not Available575Open in IMG/M
3300006028|Ga0070717_11334173Not Available652Open in IMG/M
3300006358|Ga0068871_101291815Not Available686Open in IMG/M
3300006844|Ga0075428_101848292All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300006844|Ga0075428_102463011Not Available533Open in IMG/M
3300006845|Ga0075421_101017117Not Available937Open in IMG/M
3300006969|Ga0075419_10276880Not Available1126Open in IMG/M
3300009012|Ga0066710_100416668All Organisms → cellular organisms → Bacteria → Acidobacteria2006Open in IMG/M
3300009038|Ga0099829_10948803All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300009088|Ga0099830_10484778All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300009098|Ga0105245_10075781All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3063Open in IMG/M
3300009100|Ga0075418_10650250All Organisms → cellular organisms → Bacteria1136Open in IMG/M
3300009137|Ga0066709_102656696Not Available669Open in IMG/M
3300009176|Ga0105242_11323778Not Available745Open in IMG/M
3300009177|Ga0105248_11963003Not Available665Open in IMG/M
3300009177|Ga0105248_13353322Not Available509Open in IMG/M
3300010041|Ga0126312_10705551All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300010400|Ga0134122_11031382All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300010403|Ga0134123_11466439Not Available725Open in IMG/M
3300012096|Ga0137389_10211328All Organisms → cellular organisms → Bacteria → Acidobacteria1619Open in IMG/M
3300012189|Ga0137388_10230962All Organisms → cellular organisms → Bacteria1678Open in IMG/M
3300012200|Ga0137382_10604970All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300012200|Ga0137382_11031093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria590Open in IMG/M
3300012200|Ga0137382_11195081Not Available540Open in IMG/M
3300012202|Ga0137363_10452192All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300012203|Ga0137399_10508670All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium1010Open in IMG/M
3300012205|Ga0137362_10529723Not Available1018Open in IMG/M
3300012205|Ga0137362_11433806Not Available577Open in IMG/M
3300012205|Ga0137362_11780398Not Available503Open in IMG/M
3300012206|Ga0137380_10728405Not Available860Open in IMG/M
3300012207|Ga0137381_11452717Not Available578Open in IMG/M
3300012208|Ga0137376_11745710Not Available513Open in IMG/M
3300012210|Ga0137378_10965627Not Available766Open in IMG/M
3300012211|Ga0137377_11388674Not Available631Open in IMG/M
3300012212|Ga0150985_100247735All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1766Open in IMG/M
3300012212|Ga0150985_117489320Not Available890Open in IMG/M
3300012349|Ga0137387_10525782Not Available858Open in IMG/M
3300012357|Ga0137384_10317161Not Available1294Open in IMG/M
3300012359|Ga0137385_11242790Not Available607Open in IMG/M
3300012363|Ga0137390_11576988All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012469|Ga0150984_113504119All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1006Open in IMG/M
3300012683|Ga0137398_10848641Not Available638Open in IMG/M
3300012923|Ga0137359_10133193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2211Open in IMG/M
3300012923|Ga0137359_10448183All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300012923|Ga0137359_10944336Not Available742Open in IMG/M
3300012930|Ga0137407_12108011Not Available538Open in IMG/M
3300013306|Ga0163162_11443777Not Available783Open in IMG/M
3300013306|Ga0163162_11623073Not Available738Open in IMG/M
3300013308|Ga0157375_11964628All Organisms → cellular organisms → Bacteria → Acidobacteria695Open in IMG/M
3300014164|Ga0181532_10675269All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium558Open in IMG/M
3300014492|Ga0182013_10112742All Organisms → cellular organisms → Bacteria1801Open in IMG/M
3300014499|Ga0182012_10316574Not Available1048Open in IMG/M
3300014501|Ga0182024_10166894All Organisms → cellular organisms → Bacteria3063Open in IMG/M
3300014838|Ga0182030_10187698All Organisms → cellular organisms → Bacteria → Acidobacteria2510Open in IMG/M
3300015264|Ga0137403_10665800Not Available903Open in IMG/M
3300017946|Ga0187879_10583965All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6621Open in IMG/M
3300020579|Ga0210407_10575858Not Available878Open in IMG/M
3300021168|Ga0210406_10298836All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300021168|Ga0210406_11328439Not Available517Open in IMG/M
3300021170|Ga0210400_10135884All Organisms → cellular organisms → Bacteria → Proteobacteria1972Open in IMG/M
3300021171|Ga0210405_10274441All Organisms → cellular organisms → Bacteria → Acidobacteria1333Open in IMG/M
3300021432|Ga0210384_10413112All Organisms → cellular organisms → Bacteria1216Open in IMG/M
3300021478|Ga0210402_10311798All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1457Open in IMG/M
3300021559|Ga0210409_10191599All Organisms → cellular organisms → Bacteria1864Open in IMG/M
3300021559|Ga0210409_11160193All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300025903|Ga0207680_11311986All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300025923|Ga0207681_10338543All Organisms → cellular organisms → Bacteria → Acidobacteria1201Open in IMG/M
3300025927|Ga0207687_10620192All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae913Open in IMG/M
3300025928|Ga0207700_10304240All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1378Open in IMG/M
3300025936|Ga0207670_10024190All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus3794Open in IMG/M
3300025941|Ga0207711_11812438Not Available553Open in IMG/M
3300026319|Ga0209647_1040229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2629Open in IMG/M
3300026551|Ga0209648_10385671Not Available933Open in IMG/M
3300026551|Ga0209648_10581594Not Available619Open in IMG/M
3300027862|Ga0209701_10713408All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300027880|Ga0209481_10178801Not Available1055Open in IMG/M
3300027909|Ga0209382_10011754All Organisms → cellular organisms → Bacteria → Acidobacteria10852Open in IMG/M
3300028381|Ga0268264_11336200All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300028748|Ga0302156_10123877All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1283Open in IMG/M
3300029911|Ga0311361_10760726All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076870Open in IMG/M
3300029951|Ga0311371_11613303All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300030051|Ga0302195_10456463Not Available548Open in IMG/M
3300031236|Ga0302324_102924001All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300031258|Ga0302318_10434325Not Available664Open in IMG/M
3300031261|Ga0302140_10661040Not Available772Open in IMG/M
3300031525|Ga0302326_11075933All Organisms → cellular organisms → Bacteria → Acidobacteria1121Open in IMG/M
3300032515|Ga0348332_10204934Not Available591Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil26.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.57%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.67%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.76%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.81%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.86%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.86%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.90%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.95%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.95%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.95%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030051Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031261Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10082339143300000364SoilMADERANTDSAILDAVRILKTKIPAADHAALDSRLQELVNDPEADDNGVISILRQEFDPESQ*
INPhiseqgaiiFebDRAFT_10569985723300000364SoilMADEHANADLEITESVRILKLTIPASDHAALESRLQELMNDPSTDDHDVISILRSEFDPEGS*
Ga0066683_1042156423300005172SoilMADEHANRDSAITAAFGFENEIPPGDHAVLDSRVQELINAPETDDDVISILRAEFDPEQEQY*
Ga0065715_1095180123300005293Miscanthus RhizosphereHSSTMADEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYKQ*
Ga0065705_1102231813300005294Switchgrass RhizosphereVADEHASSDPEITEAVRILKLKIPASDHSAVASRLESLINDPSTDDDDVIAILRAEFDPAHEK*
Ga0070690_10144566523300005330Switchgrass RhizosphereMADEHANTDPEITEGVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG*
Ga0070689_10027834523300005340Switchgrass RhizosphereMADEHANTDPEIIEGVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG*
Ga0070691_1083234623300005341Corn, Switchgrass And Miscanthus RhizosphereMADQNANTDPKIDRCVQELKRKIPAADHAALESRLQGLINDPDTDDNDVISILRREFDPEETQAVRS*
Ga0070667_10089052713300005367Switchgrass RhizosphereMADEHANTDPEITESVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVISILRDEFDPDHGE*
Ga0070667_10232006913300005367Switchgrass RhizosphereMADEHANTDPEITESVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG*
Ga0070709_1026985213300005434Corn, Switchgrass And Miscanthus RhizosphereMADGHANTDPEISEYIRILKLKIPPSDHGALDSRAQELMNDPSTDDDDVVEILRREFDPEL*
Ga0070694_10070605623300005444Corn, Switchgrass And Miscanthus RhizosphereMADEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYKQ*
Ga0066699_1114081723300005561SoilMADEHASSDPEIAEAVRILKLKIPPADHGALDSRAQELMNDPSTDDDDVISILRSE
Ga0070763_1074819013300005610SoilMADEHASTDPEIAECIRILKSKIPPADHGAIDSRVQELMNDPSTDDDDVISILRREFDPE
Ga0068859_10151142023300005617Switchgrass RhizosphereDPEITEGVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG*
Ga0068859_10200454923300005617Switchgrass RhizosphereMAAEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYK
Ga0068859_10259473923300005617Switchgrass RhizosphereMADEHANNDSAITEVVRILKTKIPPADHAALESRLEALINDPSTDDEDVISILRQEFDPEEPKGT*
Ga0068861_10020009123300005719Switchgrass RhizosphereMLHSSTMADEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYKQ*
Ga0068860_10217849223300005843Switchgrass RhizosphereFQGTAKHNMLHSSTMADEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYKQ*
Ga0070717_1133417323300006028Corn, Switchgrass And Miscanthus RhizosphereMADEHANTDPEISEYIRILKLKIPPSDHGALDSRAQELMNDPSTDDDDVVEILRREFDPEL*
Ga0068871_10129181523300006358Miscanthus RhizosphereMADEHANTDSEITEAVRILKSKIPPADHAALDSRLQDLINDPSTDDDDVITILRSEFDPD
Ga0075428_10184829223300006844Populus RhizosphereMADEHANTDSAIFETVRILKLKIPPADHAALDSRVQELINDPSTDDDDVITILRSEFEPDQ*
Ga0075428_10246301113300006844Populus RhizosphereANTDPAILEAVSDLKVKIPASDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYRQITDIHPRNW*
Ga0075421_10101711723300006845Populus RhizosphereVLHSSTMADEHANTDPAILEAVSDLKVKIPASDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYRQITDIHPRNW*
Ga0075419_1027688013300006969Populus RhizosphereMADEHANTDPAILEAVSDLKVKIPASDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYRQITDIHPRNW*
Ga0066710_10041666823300009012Grasslands SoilMADEHANTDSDIIETARILKTKIPASDHAALDSRLQDLINDPSTDDDDVISILRKEFDPEGSKEF
Ga0099829_1094880323300009038Vadose Zone SoilMADEHANTDSGIIECVRLLKSKVPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK*
Ga0099830_1048477823300009088Vadose Zone SoilMADEHANTDSAIIECVRLLKSKIPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK*
Ga0105245_1007578133300009098Miscanthus RhizosphereMADEHASTDPAISEAVRILKLKIPASDHAAIDSRVQALMNDPETDDNDVISILRSEFDPEQTR*
Ga0075418_1065025023300009100Populus RhizosphereMADEHANTDSAIMDTIRLLKSKIPPADHAALDSRAQELINDPSTDDDDVITILRSEFEPDN*
Ga0066709_10265669613300009137Grasslands SoilMADEHANTDSDIIETARILKTKIPASDHAALDSRLQDLINDPSTDDDDVISILRKEFDPEGSKEF*
Ga0105242_1132377813300009176Miscanthus RhizosphereDEHANTDSAINDAVRILKLKIPAADHAAVESRVQALMNDPETDDNDVISILRSEFDPEDTK*
Ga0105248_1196300313300009177Switchgrass RhizosphereMADEHASTDPAISEAVRILKLKIPASDHAAIDSRVQALMNDPETDDNDVISILRSEFDPEHK*
Ga0105248_1335332213300009177Switchgrass RhizosphereMADEHANTDSEITEAIRILKSKIPPADHAALDSRLQDLINDPSTDDDDVITILRSEFDPD
Ga0126312_1070555123300010041Serpentine SoilMADEHANTDSAIIDTIRLLKTRIPAADHAALDSRAQELINDPSTDDDDVITILRSEFEPEQDH*
Ga0134122_1103138223300010400Terrestrial SoilMADEHANTDPEITESVRLLKLKIPLADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG*
Ga0134123_1146643913300010403Terrestrial SoilMADEHASTNSEITECVRILKLKIPPADHGAVDSRLEALINDPNTDDDDVISILRAEFDPEHEE*
Ga0137389_1021132833300012096Vadose Zone SoilMADEHANTDSAIIDAVQLLKSRIPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK*
Ga0137388_1023096223300012189Vadose Zone SoilMADEHANTDSAIIECVRLLKSKVPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK*
Ga0137382_1060497023300012200Vadose Zone SoilMADEHASSDPEITEVIRILKSKIPPADHGALDSRAQDLMNDPSTDDDDVISILRSEFDPEQ*
Ga0137382_1103109313300012200Vadose Zone SoilMADEHATSDPEIAEAVRILKLKIPPADHGALDSRAQELMNDPSTDDDD
Ga0137382_1119508123300012200Vadose Zone SoilMADEHANTDSEIAEAVRILKLKIPSSDHAAVDSRLQDLINDPSTDDDDVIAILRSEFDPGHED*
Ga0137363_1045219213300012202Vadose Zone SoilMAEANTDSAINEVVRILKLKIPPEDHAALDSRLQELMNDPSTDDDDVISILRDEFDPA*
Ga0137399_1050867013300012203Vadose Zone SoilMADEHASSDPEITEAIRILKSKIPPADHGALDSRAQDLMNDPSTDDDDVISILRSEFDPEQ*
Ga0137362_1052972323300012205Vadose Zone SoilMAEANTDSAINEVVRILKLKIPPEDHAALDSRLQELMNDPSTDNDDLISILRDESDPV*
Ga0137362_1143380623300012205Vadose Zone SoilMADEHANTDSAISEAVRILKLKIPPSDHAAVDSRLQDLINDPSTDDDDVIAILRSEFDSGHED*
Ga0137362_1178039813300012205Vadose Zone SoilMADEYANTDPAISECVRILKLKVPPADHAALDSRVQELMNDPSADDDDVISILPAEMCETM*
Ga0137380_1072840513300012206Vadose Zone SoilMADEHANRDSAITEAVRILKLKIPASDHGAVDSRVQELINDPEAD
Ga0137381_1145271723300012207Vadose Zone SoilMADEHAGSDPEIAEAVRILKLKIPPADHGALDSRAQELMNDPSTDDDDVISILRSEFDPEQ*
Ga0137376_1174571023300012208Vadose Zone SoilMADEHGNTDLAIFVAVRILKLKIPVSDHAALDSRVQELMNDPSIDDDDVISILLDDFDSG
Ga0137378_1096562723300012210Vadose Zone SoilMADEHASSDPEIAEAVRILKLKIPPADHGALDSRAQELMNDPSTDDDDVISILRSEFDPEQ*
Ga0137377_1138867413300012211Vadose Zone SoilMADEHANRDSAITEAVRILKLKIPASDHGDVDSRLEALINDPSTDDDDVISILRAEFDPGLGYPSRQMQL*
Ga0150985_10024773533300012212Avena Fatua RhizosphereMADEHANTDSAITEAVRILKLKIAASDHAAVDSRVQALMNDSETDDNDVISILRAELDPEQQ*
Ga0150985_11748932023300012212Avena Fatua RhizosphereMADEHANTDSAINDAVSILKAKSPPAEHGALDSRLEELINDPSTDDNDVIAILRAEFDPETD*
Ga0137387_1052578213300012349Vadose Zone SoilMADEHANRDSAITEAVRILKLKIPASDHGAVDSRLEALINDPSTDDDDVISILRAEFDPGLGYPSRQMQL*
Ga0137384_1031716113300012357Vadose Zone SoilMADEHANRDSAITEAVRILKLKIPASDHGAVDSRLEALINDPSTDNDDVISILRAEFDPGLGYPSRQMQL*
Ga0137385_1124279013300012359Vadose Zone SoilMADEHASSDPEIAEAVRILKLKIPPADHGALDSRAQELMNDPSTDDDDVISILRSEFDP
Ga0137390_1157698823300012363Vadose Zone SoilMADEHANTDSAIIDAVQLLKSKIPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK*
Ga0150984_11350411923300012469Avena Fatua RhizosphereMADEHANTDSAINDAVSILKAKIPPAEHGALDSRLEELINDPSTDDNDVIAILRAEFDPETD*
Ga0137398_1084864123300012683Vadose Zone SoilMADEDAHADSGINEVVQILKSEIPASDHAALDSRLQDIINDPSTDDDDVISILRDEFDPA
Ga0137359_1013319333300012923Vadose Zone SoilMAEANTDSAINEVVRILKLKIPPEDHAALDSRLQELMNDPSTDNDDVISILRDESDPV*
Ga0137359_1044818313300012923Vadose Zone SoilTDSAIAECVRILKSKIPPADHAALDSRLQDLINDPSTDDDDVISILRSEFDM*
Ga0137359_1094433613300012923Vadose Zone SoilMAEEHANTDEAIDEFVRILKLKIPASDHAALDARVEELMHDPSLDEDDVISIVRDEFDPAQGQ*
Ga0137407_1210801123300012930Vadose Zone SoilMADEYANTDSEITEAVRILKLKIPASDHAAIDSRLQELINDPSTDDDDVIAILRSEFDTGE*
Ga0163162_1144377713300013306Switchgrass RhizosphereMVNSTQMADEHANTDSEITEAIRILKSKIPPADHAALDSRLQDLINDPSTDDDDVITILRSEFDPD*
Ga0163162_1162307323300013306Switchgrass RhizosphereMADEHADTDSAIMEAVRILKLKIPPSDHAALDSRVQELIHDPSTDDNDVIAILLDEFDPA
Ga0157375_1196462813300013308Miscanthus RhizosphereMADEHASTDPAISEAVRILKLKIPASDHAAIDSRVQALMNDPETDDNDVISILRSEFDPENTK*
Ga0181532_1067526913300014164BogMADQFANTDPKIIRSVEELKSKIPAADHFALDSRLQALINDPDTDDDDVISILRQEFDPDHR*
Ga0182013_1011274233300014492BogMAGQGANTDPRINECVAELKSKIPPADHDSLESRLQALINDPDTDDDDVISMLRQEFDPAS*
Ga0182012_1031657423300014499BogMADQNANTDPKINRCVEELKSRIPAADHAALESRLQGLINDPDTDDDDVIMILREEFDPGA*
Ga0182024_1016689423300014501PermafrostMADERANTDPAILECVLELKSKIPPSDHAALDSRVQGLINDPSTDDSDIVSILRSEFDPAHRQ*
Ga0182030_1018769823300014838BogMADQNANTDPKINRCVEELKSKIPAADHGALDSRLQSLINDPDSDDDDVISILRKEFDPKHG*
Ga0137403_1066580023300015264Vadose Zone SoilMADEHANTDSEITEAVRILKSKIPASDHAAIDSRLQELINDPSTDDDDVIAILRSEFEPDE*
Ga0187879_1058396523300017946PeatlandMAELGNPPCYALNRMAGRGANNDPRIDECVAELKSKIPPADHDSLESRLQALINDPDTDDDDVISMLRQEFDPAS
Ga0210407_1057585813300020579SoilVIHCSTMADEYANSDSAINEVVQILKSKIPPSDHAALDSRLEALINDPSTDDDDV
Ga0210406_1029883613300021168SoilMADEHANADQAITDCVLMLKSKIPAADHAALDSRVQALMNDPNTDDDDVISILRDEFDPSQAQ
Ga0210406_1132843933300021168SoilMADEHASTDPEISEFVRILKSKIPPADHGAFDSRVQELMNDPSTDDDDVLSILRSEFDPE
Ga0210400_1013588413300021170SoilMADEHANADQAITDCVLMLKSKIPAADHAALDSRVQALMNDPNTDDDDVISIL
Ga0210405_1027444133300021171SoilMADEHANTDPEIGECVRILKSKIPPAEHGALDSRAQELMNDPSTDDDDVVEILRSEFDPE
Ga0210384_1041311223300021432SoilMADEHASSDPEIAEAIRILKLKIPPADHGALDSRAQELMNDPSTDDDDVISILRSEFDPE
Ga0210402_1031179823300021478SoilMADEHANADPEISECIRILKLKIPPSDHGALDSRAQELMNDPSTDDDDVVAILRSEFDPE
Ga0210409_1019159913300021559SoilFSPMADEHANTDSAINEVVRVLKLKIPPEDHAALDSRVQELMNDPSTDDDDVISILRDEFDPA
Ga0210409_1116019323300021559SoilMADEHANTDPEITDYVRILKSKIPPADHGALDSRAQELMNDPSTDDDDVISILRSE
Ga0207680_1131198613300025903Switchgrass RhizosphereMADEHANTDPEITESVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVISILRDEFDPDHGE
Ga0207681_1033854323300025923Switchgrass RhizosphereMADEHANTDPEITEGVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG
Ga0207687_1062019213300025927Miscanthus RhizosphereVSASRVTLFQMADEHASTDPAISEAVRILKLKIPASDHAAIDSRVQALMNDPETDDNDVISILRSEFDPEQTR
Ga0207700_1030424013300025928Corn, Switchgrass And Miscanthus RhizospherePEISEYIRILKLKIPPSDHGALDSRAQELMNDPSTDDDDVVEILRREFDPEL
Ga0207670_1002419023300025936Switchgrass RhizosphereMADEHANTDPEIIEGVRLLKLKIPPADHAALESRLQDLMNDPSTDDDDVILILRSEFDPEQG
Ga0207711_1181243823300025941Switchgrass RhizosphereLVSASRVTLFQMADEHASTDPAISEAVRILKLKIPASDHAAIDSRVQALMNDPETDDNDVISILRSEFDPEHK
Ga0209647_104022913300026319Grasslands SoilMADEHANTDSHITEAVRILKLKIPASDHGALDSRVQALMNDPETDDDDVISILRAEFDPEHEE
Ga0209648_1038567113300026551Grasslands SoilDEHANTDSAITDAVLILKSKIPPADHAALDSRVQDLINDPETDDGDVISILRAEFDPDESDVEP
Ga0209648_1058159423300026551Grasslands SoilMADEHANTDSAITDAVLILKSKIPPADHAALDSRVQDLINDPETDDGDVISILRAEFDPDESDVEP
Ga0209701_1071340823300027862Vadose Zone SoilEHANTDSGIIECVRLLKSKVPPADHAALDSRVQELMNDPSTDDDDVITILRSEFEPEPDK
Ga0209481_1017880123300027880Populus RhizosphereVLHSSTMADEHANTDPAILEAVSDLKVKIPASDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYRQITDIHPRNW
Ga0209382_1001175453300027909Populus RhizosphereMADEHANTDSAIFETVRILKLKIPPADHAALDSRVQELINDPSTDDDDVITILRSEFEPD
Ga0268264_1133620023300028381Switchgrass RhizosphereMLHSSTMADEHASTDPAILASVSDLKAKIPPSDHAALDSRVQALMNDPSTDDDDVISILRSEFDPTYKQ
Ga0302156_1012387713300028748BogMADQNANTDPKINRGVEELKSKIPAADHGALDSRLQALINDPDTDDDDVISILRKEFDPEHG
Ga0311361_1076072623300029911BogPPCYALNRMAGRGANNDPRIDECVAELKSKIPPADHDSLESRLQALINDPDTDDDDVISMLRQEFDPAS
Ga0311371_1161330323300029951PalsaVLRSEAMAVQGANTDAKIIRCVDELKSIIPREDHALLDSRLQALINDPDADDNDVVAILQKEFGPQ
Ga0302195_1045646313300030051BogGCNPKSMADQNANTDPKINRGVEELKSKIPAADHGALDSRLQALINDPDTDDDDVISILRKEFDPEHG
Ga0302324_10292400123300031236PalsaMASSAWSIPSMLRSESMAGRGANTNSEINNVVEDLKSRIPAADHGALESRRQALINDPDADDDDVISILRQEFDPPRE
Ga0302318_1043432513300031258BogMADQNANTDPKIARCVEELKSKIPPADHGALDSRLQALINDPDTDDDDVISILRKEFNPQHE
Ga0302140_1066104023300031261BogMADQNANTDPKIDRCVEELKSKIPAADHGALDSRLQALINDPDTDDDDVISILTKEFDPGHV
Ga0302326_1107593323300031525PalsaVLRSEAMADQGANTDAKIIRCVDELKSIIPREDHALLDSRLQALINDPDADDNDVVAILQKEFGPQ
Ga0348332_1020493423300032515Plant LitterMLRSESMAGQGANADPNINERLEELKSKIPAADHASLESRLQALINDPDTDDNDVISILRQEFDQEKR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.