NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095516

Metagenome / Metatranscriptome Family F095516

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095516
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 44 residues
Representative Sequence MSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETR
Number of Associated Samples 69
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.90 %
% of genes near scaffold ends (potentially truncated) 99.05 %
% of genes from short scaffolds (< 2000 bps) 70.48 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (62.857 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(55.238 % of family members)
Environment Ontology (ENVO) Unclassified
(65.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.667 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 70.45%    β-sheet: 0.00%    Coil/Unstructured: 29.55%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00476DNA_pol_A 16.19
PF01612DNA_pol_A_exo1 12.38
PF11753DUF3310 5.71
PF00011HSP20 4.76
PF13361UvrD_C 2.86
PF00166Cpn10 1.90
PF03237Terminase_6N 0.95
PF00271Helicase_C 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 16.19
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 4.76
COG0234Co-chaperonin GroES (HSP10)Posttranslational modification, protein turnover, chaperones [O] 1.90


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A62.86 %
All OrganismsrootAll Organisms37.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10151638Not Available793Open in IMG/M
3300001748|JGI11772J19994_1012482Not Available1402Open in IMG/M
3300004050|Ga0055491_10037170Not Available1043Open in IMG/M
3300005216|Ga0068994_10155926All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006025|Ga0075474_10026505All Organisms → cellular organisms → Bacteria → Proteobacteria2064Open in IMG/M
3300006025|Ga0075474_10233686All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300006026|Ga0075478_10017415Not Available2433Open in IMG/M
3300006026|Ga0075478_10249180Not Available532Open in IMG/M
3300006400|Ga0075503_1028917Not Available865Open in IMG/M
3300006400|Ga0075503_1128790All Organisms → Viruses → Predicted Viral1936Open in IMG/M
3300006802|Ga0070749_10484444Not Available675Open in IMG/M
3300006810|Ga0070754_10344479Not Available661Open in IMG/M
3300006867|Ga0075476_10034243All Organisms → cellular organisms → Bacteria → Proteobacteria2118Open in IMG/M
3300006868|Ga0075481_10044375Not Available1712Open in IMG/M
3300006919|Ga0070746_10441599Not Available578Open in IMG/M
3300007234|Ga0075460_10171881Not Available747Open in IMG/M
3300007236|Ga0075463_10069237Not Available1139Open in IMG/M
3300007344|Ga0070745_1013285All Organisms → Viruses3823Open in IMG/M
3300007346|Ga0070753_1223875Not Available689Open in IMG/M
3300007539|Ga0099849_1355873Not Available520Open in IMG/M
3300007542|Ga0099846_1014349All Organisms → Viruses3111Open in IMG/M
3300007542|Ga0099846_1319857Not Available529Open in IMG/M
3300007960|Ga0099850_1407521Not Available503Open in IMG/M
3300009001|Ga0102963_1457750Not Available500Open in IMG/M
3300009124|Ga0118687_10421413All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300009474|Ga0127390_1006804Not Available3519Open in IMG/M
3300010296|Ga0129348_1007815Not Available3892Open in IMG/M
3300010296|Ga0129348_1040772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium1684Open in IMG/M
3300010297|Ga0129345_1102886Not Available1057Open in IMG/M
3300010297|Ga0129345_1155818Not Available824Open in IMG/M
3300010297|Ga0129345_1245821Not Available626Open in IMG/M
3300010299|Ga0129342_1172077All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon780Open in IMG/M
3300010300|Ga0129351_1015785Not Available3137Open in IMG/M
3300010316|Ga0136655_1001889Not Available9184Open in IMG/M
3300010316|Ga0136655_1035428Not Available1602Open in IMG/M
3300010368|Ga0129324_10267099Not Available679Open in IMG/M
3300010370|Ga0129336_10548628All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300012522|Ga0129326_1012724All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012965|Ga0129346_1009665All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300017697|Ga0180120_10213466Not Available795Open in IMG/M
3300017956|Ga0181580_10144702Not Available1706Open in IMG/M
3300017967|Ga0181590_10420323All Organisms → Viruses → environmental samples → uncultured virus946Open in IMG/M
3300017967|Ga0181590_11124878Not Available505Open in IMG/M
3300018080|Ga0180433_10672162All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300018424|Ga0181591_10146500Not Available1895Open in IMG/M
3300018424|Ga0181591_10194671All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1599Open in IMG/M
3300018424|Ga0181591_10707188Not Available709Open in IMG/M
3300021389|Ga0213868_10718761All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300021389|Ga0213868_10720622Not Available507Open in IMG/M
3300021958|Ga0222718_10033367Not Available3420Open in IMG/M
3300021959|Ga0222716_10005419All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon SG8-52-39924Open in IMG/M
3300021959|Ga0222716_10308937Not Available951Open in IMG/M
3300021960|Ga0222715_10028366All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Thermoplasmatales → unclassified Thermoplasmatales → Thermoplasmatales archaeon SG8-52-34061Open in IMG/M
3300021960|Ga0222715_10062716Not Available2514Open in IMG/M
3300021960|Ga0222715_10137540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1531Open in IMG/M
3300021960|Ga0222715_10200919Not Available1192Open in IMG/M
3300021960|Ga0222715_10262485Not Available999Open in IMG/M
3300021961|Ga0222714_10034669Not Available3698Open in IMG/M
3300021961|Ga0222714_10065166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium2440Open in IMG/M
3300021961|Ga0222714_10179311Not Available1241Open in IMG/M
3300021961|Ga0222714_10216748Not Available1094Open in IMG/M
3300021961|Ga0222714_10372442Not Available761Open in IMG/M
3300022050|Ga0196883_1000684Not Available3601Open in IMG/M
3300022050|Ga0196883_1019200All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300022050|Ga0196883_1035460Not Available607Open in IMG/M
3300022057|Ga0212025_1035690Not Available846Open in IMG/M
3300022063|Ga0212029_1015062All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria996Open in IMG/M
3300022063|Ga0212029_1065756Not Available531Open in IMG/M
3300022068|Ga0212021_1061713Not Available766Open in IMG/M
3300022068|Ga0212021_1085685All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300022069|Ga0212026_1022671Not Available895Open in IMG/M
3300022158|Ga0196897_1024061Not Available740Open in IMG/M
3300022158|Ga0196897_1028667Not Available673Open in IMG/M
3300022183|Ga0196891_1038712Not Available883Open in IMG/M
3300022183|Ga0196891_1093374All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300022187|Ga0196899_1043382All Organisms → Viruses → environmental samples → uncultured virus1510Open in IMG/M
3300022198|Ga0196905_1093985Not Available805Open in IMG/M
3300022200|Ga0196901_1090709All Organisms → Viruses1077Open in IMG/M
3300023176|Ga0255772_10016066All Organisms → Viruses6131Open in IMG/M
3300024262|Ga0210003_1009120Not Available6996Open in IMG/M
3300025630|Ga0208004_1003526All Organisms → Viruses5732Open in IMG/M
3300025646|Ga0208161_1001955Not Available10660Open in IMG/M
3300025646|Ga0208161_1035844All Organisms → Viruses1704Open in IMG/M
3300025653|Ga0208428_1007549Not Available3920Open in IMG/M
3300025655|Ga0208795_1016239Not Available2507Open in IMG/M
3300025655|Ga0208795_1024921Not Available1936Open in IMG/M
3300025655|Ga0208795_1039560Not Available1441Open in IMG/M
3300025671|Ga0208898_1007410All Organisms → Viruses5821Open in IMG/M
3300025671|Ga0208898_1015041Not Available3651Open in IMG/M
3300025671|Ga0208898_1192974All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300025687|Ga0208019_1020055Not Available2635Open in IMG/M
3300025687|Ga0208019_1028791All Organisms → Viruses2092Open in IMG/M
3300025751|Ga0208150_1232103All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300025769|Ga0208767_1093070Not Available1228Open in IMG/M
3300025771|Ga0208427_1003297All Organisms → Viruses6692Open in IMG/M
3300025853|Ga0208645_1281352Not Available534Open in IMG/M
3300025889|Ga0208644_1361413All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300027917|Ga0209536_100016677Not Available10437Open in IMG/M
3300027917|Ga0209536_102767706All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300031578|Ga0307376_10441813Not Available849Open in IMG/M
3300031669|Ga0307375_10852959Not Available510Open in IMG/M
3300034374|Ga0348335_004044Not Available9500Open in IMG/M
3300034374|Ga0348335_006681Not Available6898Open in IMG/M
3300034418|Ga0348337_007645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED2036723Open in IMG/M
3300034418|Ga0348337_099207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium955Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous55.24%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water12.38%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient11.43%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.67%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment1.90%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.90%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.90%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.90%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.95%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.95%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water0.95%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment0.95%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.95%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment0.95%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300004050Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2EnvironmentalOpen in IMG/M
3300005216Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2EnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006400Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009124Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsfEnvironmentalOpen in IMG/M
3300009474Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 3m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010299Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010300Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300012522Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012965Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022069Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025751Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025771Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1015163843300000116MarineMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLE
JGI11772J19994_101248213300001748Saline Water And SedimentMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0055491_1003717013300004050Natural And Restored WetlandsMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLME
Ga0068994_1015592633300005216Natural And Restored WetlandsMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINTLETRLQLMEA
Ga0075474_1002650563300006025AqueousMASKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTN
Ga0075474_1023368623300006025AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTN
Ga0075478_1001741543300006026AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTIN
Ga0075478_1024918033300006026AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLME
Ga0075503_102891723300006400AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLM
Ga0075503_112879013300006400AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMT
Ga0070749_1048444413300006802AqueousMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINT
Ga0070754_1034447943300006810AqueousMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGITNTINTLETRLQLM
Ga0075476_1003424363300006867AqueousMASKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLMEADLLK
Ga0075481_1004437513300006868AqueousMSKITEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEAD
Ga0070746_1044159913300006919AqueousMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLE
Ga0075460_1017188113300007234AqueousMSKINEETAVKTDLKTLGMIIAAAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0075463_1006923743300007236AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEA
Ga0070745_101328563300007344AqueousMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINTLE
Ga0070753_122387513300007346AqueousMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGMTNTINT
Ga0099849_135587313300007539AqueousMSKITEDTSVKTDVKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEADL
Ga0099846_101434953300007542AqueousMSKITEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNTINTLETRLQLME
Ga0099846_131985723300007542AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQL
Ga0099850_140752133300007960AqueousMSKITEDTSVKTDVKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLM
Ga0102963_145775033300009001Pond WaterMSRITEETAVKTDLKTIGMIIAAAGFAVYMYIGMT
Ga0118687_1042141323300009124SedimentMSKINEETAVRTDLKTIGMIIAAAGFAVYMYIGMTNTIN
Ga0127390_100680413300009474Meromictic PondMSKITEETSVKTDLKTIGMIITGAGFAVYMYIGMTNT
Ga0129348_100781583300010296Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLMEA
Ga0129348_104077253300010296Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEAD
Ga0129345_110288633300010297Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLET
Ga0129345_115581833300010297Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNT
Ga0129345_124582133300010297Freshwater To Marine Saline GradientMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMT
Ga0129342_117207713300010299Freshwater To Marine Saline GradientVTSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMT
Ga0129351_101578553300010300Freshwater To Marine Saline GradientMSKINEETAVKTDLKTIGMIIAGAGLAVYMYIGMTNTINTLETRLQLMEA
Ga0136655_1001889153300010316Freshwater To Marine Saline GradientMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGITNTINTLETRLQLMEA
Ga0136655_103542863300010316Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTN
Ga0129324_1026709933300010368Freshwater To Marine Saline GradientMSKITEDMSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLN
Ga0129336_1054862813300010370Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNT
Ga0129326_101272433300012522AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEADLLKK
Ga0129346_100966523300012965AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEADLLKKGRSSTC*
Ga0180120_1021346613300017697Freshwater To Marine Saline GradientMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQ
Ga0181580_1014470233300017956Salt MarshMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTL
Ga0181590_1042032313300017967Salt MarshMSKITEETAVKSDLKTLGMIIAGAGFAVYMYIGMTNTI
Ga0181590_1112487823300017967Salt MarshMSKITEETAVRTDLKTIGMIIAAAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0180433_1067216233300018080Hypersaline Lake SedimentMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINTLETRLQLM
Ga0181591_1014650043300018424Salt MarshMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTIN
Ga0181591_1019467133300018424Salt MarshMSKITEETAVKTDLKTLGMIIAAAGFAVYMYIGMTNTINTLETRL
Ga0181591_1070718823300018424Salt MarshMSKITEETAVKTDLKTLGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0213868_1071876113300021389SeawaterMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLE
Ga0213868_1072062213300021389SeawaterMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLETRLQ
Ga0222718_1003336753300021958Estuarine WaterMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0222716_10005419143300021959Estuarine WaterMSKITEETAVKTDLKTLGMIIAAAGFAVYMYIGMTNTINTLETRLQLMEAD
Ga0222716_1030893733300021959Estuarine WaterMSKITEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNTINTLETRLQLMEAD
Ga0222715_1002836663300021960Estuarine WaterMSKITEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNT
Ga0222715_1006271613300021960Estuarine WaterMSKITEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINT
Ga0222715_1013754053300021960Estuarine WaterMSKITEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTI
Ga0222715_1020091913300021960Estuarine WaterMSKLTEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNT
Ga0222715_1026248513300021960Estuarine WaterMSKITEDTSVKTDIKTIGMIIAAAGFAVYMYIGMTNTINTLETRLQLMEADLLKK
Ga0222714_1003466913300021961Estuarine WaterMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINTLET
Ga0222714_1006516613300021961Estuarine WaterMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEADLL
Ga0222714_1017931113300021961Estuarine WaterMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLET
Ga0222714_1021674833300021961Estuarine WaterMSKITEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNTINTLETRLQLMEADLLKK
Ga0222714_1037244223300021961Estuarine WaterMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETR
Ga0196883_100068413300022050AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTIN
Ga0196883_101920013300022050AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLMG
Ga0196883_103546033300022050AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLEK
Ga0212025_103569013300022057AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLE
Ga0212029_101506233300022063AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLMEADL
Ga0212029_106575633300022063AqueousMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLETRLQL
Ga0212021_106171323300022068AqueousMSKITEETAVKTDLKTLGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEADLL
Ga0212021_108568513300022068AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLET
Ga0212026_102267113300022069AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLM
Ga0196897_102406133300022158AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLMEADLLK
Ga0196897_102866713300022158AqueousMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNT
Ga0196891_103871223300022183AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEAD
Ga0196891_109337433300022183AqueousMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINTLETRLQLMEAD
Ga0196899_104338213300022187AqueousMSKITEDTSVKTDIKTIVSIVAAGGFAVYMYIGMTN
Ga0196905_109398513300022198AqueousMSKITEETAVKTDLKTLGMIIAGAGFAVYMYIGMTNTINTLETRLQLM
Ga0196901_109070913300022200AqueousMSKITEDMSVKTDIKTIVTIIAAAGFAVYTYIGLTNTINTLETRLQ
Ga0255772_1001606613300023176Salt MarshMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTN
Ga0210003_100912083300024262Deep SubsurfaceMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINT
Ga0208004_100352613300025630AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTL
Ga0208161_1001955163300025646AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLMEAD
Ga0208161_103584413300025646AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTN
Ga0208428_100754973300025653AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLME
Ga0208795_101623913300025655AqueousMSKITEETAVKTDLKTLGMIIAGAGFAVYMYIGMTNTINTLETRLQLMEADLLKK
Ga0208795_102492113300025655AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEA
Ga0208795_103956013300025655AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTL
Ga0208898_100741093300025671AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTLETRL
Ga0208898_101504163300025671AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETRLQLM
Ga0208898_119297413300025671AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMTNTINTL
Ga0208019_102005533300025687AqueousMSKITEETAVKTDLKTLGMIIAGAGFAVYMYIGMTNT
Ga0208019_102879113300025687AqueousVTSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTINTLE
Ga0208150_123210333300025751AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLT
Ga0208767_109307013300025769AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGLTNTLN
Ga0208427_1003297133300025771AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRL
Ga0208645_128135213300025853AqueousMSKITEETSVKTDLKTIGMIIAGAGFAVYMYIGITNTINTLETRL
Ga0208644_136141333300025889AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLET
Ga0209536_10001667713300027917Marine SedimentMSKINEETAVKTDLKTIGMIIAAAGFAVYMYIGMTNTINTLETRPQ
Ga0209536_10276770623300027917Marine SedimentMSKINEETAVKTDLKTLGMIIAAAGFAVYMYIGMTNTINTLET
Ga0307376_1044181333300031578SoilMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQ
Ga0307375_1085295913300031669SoilMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTINTLETR
Ga0348335_004044_2_1063300034374AqueousMSKINEETAVKTDLKTIGMIIAGAGFAVYMYIGMT
Ga0348335_006681_6778_68973300034374AqueousMSKITEDTSVKTDIKTIVSIVAAAGFAVYMYIGMTNTINT
Ga0348337_007645_1_1563300034418AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGLTNTLNTLETRLQLMEADL
Ga0348337_099207_840_9533300034418AqueousMSKITEDTSVKTDIKTIGSLIAAAGFAVYMYIGMTNTI


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