Metagenome / Metatranscriptome Family F095502

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095502
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	110 residues
Representative Sequence	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHS
Number of Associated Samples	82
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	89.52 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (76.190 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (57.143 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.74% β-sheet: 0.00% Coil/Unstructured: 34.26%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04461	DUF520	4.76
PF00149	Metallophos	4.76
PF13772	AIG2_2	1.90
PF00589	Phage_integrase	0.95
PF00248	Aldo_ket_red	0.95
PF00145	DNA_methylase	0.95
PF13091	PLDc_2	0.95
PF06094	GGACT	0.95
PF00376	MerR	0.95
PF09903	DUF2130	0.95
PF14099	Polysacc_lyase	0.95
PF12973	Cupin_7	0.95
PF14401	RLAN	0.95
PF00892	EamA	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	4.76
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
All Organisms	root	All Organisms	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
cellular organisms	root	All Organisms → cellular organisms	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.52 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	7.62 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.90 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.90 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Saccharospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae	7.62 %
SAR116 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster	1.90 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.95 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.95 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Reinekea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea	7.62 %
Candidatus Puniceispirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum	1.90 %
Marinovum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum	0.95 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.95 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Reinekea forsetii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	7.62 %
Candidatus Puniceispirillum marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum	1.90 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.95 %
unclassified Marinovum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum	0.95 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	76.19 %
Reinekea forsetii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	7.62 %
Candidatus Puniceispirillum marinum IMCC1322	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum → Candidatus Puniceispirillum marinum IMCC1322	1.90 %
Marinovum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	0.95 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.95 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001347\|JGI20156J14371_10073127	Not Available	1253	Open in IMG/M
3300001352\|JGI20157J14317_10135066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	799	Open in IMG/M
3300006403\|Ga0075514_1775186	Not Available	535	Open in IMG/M
3300007234\|Ga0075460_10206647	Not Available	667	Open in IMG/M
3300008791\|Ga0103696_1015019	Not Available	833	Open in IMG/M
3300008956\|Ga0104261_1028573	Not Available	676	Open in IMG/M
3300009024\|Ga0102811_1365929	Not Available	544	Open in IMG/M
3300009076\|Ga0115550_1211195	Not Available	649	Open in IMG/M
3300009434\|Ga0115562_1229861	Not Available	653	Open in IMG/M
3300009438\|Ga0115559_1183916	Not Available	761	Open in IMG/M
3300009445\|Ga0115553_1200907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum → Candidatus Puniceispirillum marinum IMCC1322	795	Open in IMG/M
3300009467\|Ga0115565_10361736	Not Available	657	Open in IMG/M
3300009476\|Ga0115555_1252634	Not Available	716	Open in IMG/M
3300009496\|Ga0115570_10341223	Not Available	643	Open in IMG/M
3300009497\|Ga0115569_10084309	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300009497\|Ga0115569_10362966	Not Available	629	Open in IMG/M
3300009508\|Ga0115567_10291631	Not Available	1026	Open in IMG/M
3300009508\|Ga0115567_10783283	Not Available	569	Open in IMG/M
3300016743\|Ga0182083_1604919	Not Available	565	Open in IMG/M
3300016791\|Ga0182095_1148407	Not Available	531	Open in IMG/M
3300016791\|Ga0182095_1514980	Not Available	599	Open in IMG/M
3300017824\|Ga0181552_10030988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	3261	Open in IMG/M
3300017824\|Ga0181552_10207594	Not Available	1008	Open in IMG/M
3300017950\|Ga0181607_10526558	Not Available	629	Open in IMG/M
3300017952\|Ga0181583_10685309	Not Available	610	Open in IMG/M
3300017957\|Ga0181571_10039638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	3327	Open in IMG/M
3300017962\|Ga0181581_10510408	Not Available	742	Open in IMG/M
3300017986\|Ga0181569_10103214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	2032	Open in IMG/M
3300018036\|Ga0181600_10321302	Not Available	772	Open in IMG/M
3300018036\|Ga0181600_10601391	Not Available	513	Open in IMG/M
3300018041\|Ga0181601_10054195	All Organisms → cellular organisms → Bacteria → Proteobacteria	2801	Open in IMG/M
3300018048\|Ga0181606_10082442	Not Available	2071	Open in IMG/M
3300018048\|Ga0181606_10459048	Not Available	672	Open in IMG/M
3300018049\|Ga0181572_10479965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300018410\|Ga0181561_10016963	All Organisms → cellular organisms → Bacteria → Proteobacteria	5476	Open in IMG/M
3300018413\|Ga0181560_10180978	Not Available	1041	Open in IMG/M
3300018413\|Ga0181560_10394650	Not Available	636	Open in IMG/M
3300018413\|Ga0181560_10514168	Not Available	544	Open in IMG/M
3300018415\|Ga0181559_10412229	Not Available	741	Open in IMG/M
3300018416\|Ga0181553_10324642	Not Available	851	Open in IMG/M
3300018417\|Ga0181558_10048166	Not Available	2895	Open in IMG/M
3300018417\|Ga0181558_10207964	Not Available	1118	Open in IMG/M
3300018417\|Ga0181558_10237603	Not Available	1023	Open in IMG/M
3300018417\|Ga0181558_10631083	Not Available	549	Open in IMG/M
3300018417\|Ga0181558_10660254	Not Available	534	Open in IMG/M
3300018420\|Ga0181563_10620535	Not Available	600	Open in IMG/M
3300018423\|Ga0181593_10743218	Not Available	691	Open in IMG/M
3300018424\|Ga0181591_10713229	Not Available	705	Open in IMG/M
3300018876\|Ga0181564_10030203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	3920	Open in IMG/M
3300018876\|Ga0181564_10732159	Not Available	519	Open in IMG/M
3300019277\|Ga0182081_1054250	Not Available	542	Open in IMG/M
3300019459\|Ga0181562_10178548	Not Available	1131	Open in IMG/M
3300019459\|Ga0181562_10505423	Not Available	573	Open in IMG/M
3300019459\|Ga0181562_10561967	Not Available	537	Open in IMG/M
3300019751\|Ga0194029_1089220	Not Available	535	Open in IMG/M
3300020051\|Ga0181555_1042774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	2373	Open in IMG/M
3300020053\|Ga0181595_10086096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1575	Open in IMG/M
3300020053\|Ga0181595_10282022	Not Available	688	Open in IMG/M
3300020055\|Ga0181575_10512703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → SAR116 cluster → Candidatus Puniceispirillum → Candidatus Puniceispirillum marinum → Candidatus Puniceispirillum marinum IMCC1322	642	Open in IMG/M
3300020056\|Ga0181574_10616388	Not Available	584	Open in IMG/M
3300020166\|Ga0206128_1086783	All Organisms → cellular organisms → Bacteria → Proteobacteria	1389	Open in IMG/M
3300020173\|Ga0181602_10155928	Not Available	1051	Open in IMG/M
3300020175\|Ga0206124_10037693	Not Available	2205	Open in IMG/M
3300020182\|Ga0206129_10037338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3296	Open in IMG/M
3300020182\|Ga0206129_10172638	Not Available	991	Open in IMG/M
3300020185\|Ga0206131_10455471	Not Available	517	Open in IMG/M
3300020188\|Ga0181605_10279149	Not Available	710	Open in IMG/M
3300020188\|Ga0181605_10288958	Not Available	692	Open in IMG/M
3300020191\|Ga0181604_10330527	Not Available	681	Open in IMG/M
3300020194\|Ga0181597_10198612	Not Available	974	Open in IMG/M
3300020194\|Ga0181597_10377875	Not Available	604	Open in IMG/M
3300020601\|Ga0181557_1057200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	2128	Open in IMG/M
3300020601\|Ga0181557_1255356	Not Available	607	Open in IMG/M
3300021085\|Ga0206677_10386900	Not Available	533	Open in IMG/M
3300021347\|Ga0213862_10285133	Not Available	584	Open in IMG/M
3300021365\|Ga0206123_10471122	Not Available	507	Open in IMG/M
3300021958\|Ga0222718_10227553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300021959\|Ga0222716_10130642	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300021960\|Ga0222715_10193943	All Organisms → cellular organisms → Bacteria → Proteobacteria	1220	Open in IMG/M
3300022905\|Ga0255756_1183675	Not Available	779	Open in IMG/M
3300022907\|Ga0255775_1124788	Not Available	1084	Open in IMG/M
3300022909\|Ga0255755_1050231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2064	Open in IMG/M
3300022922\|Ga0255779_1037272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	3278	Open in IMG/M
3300022923\|Ga0255783_10150455	Not Available	1125	Open in IMG/M
3300022926\|Ga0255753_1032799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Saccharospirillaceae → Reinekea → Reinekea forsetii	3295	Open in IMG/M
3300022926\|Ga0255753_1352971	Not Available	548	Open in IMG/M
3300023087\|Ga0255774_10406056	Not Available	612	Open in IMG/M
3300023119\|Ga0255762_10421044	Not Available	651	Open in IMG/M
3300023178\|Ga0255759_10460001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10107474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1262	Open in IMG/M
3300024301\|Ga0233451_10334919	Not Available	569	Open in IMG/M
3300025658\|Ga0209659_1166761	Not Available	646	Open in IMG/M
3300025694\|Ga0209406_1239460	Not Available	523	Open in IMG/M
3300025699\|Ga0209715_1218929	Not Available	582	Open in IMG/M
3300025699\|Ga0209715_1242878	Not Available	534	Open in IMG/M
3300025704\|Ga0209602_1227496	Not Available	534	Open in IMG/M
3300025712\|Ga0209305_1234609	Not Available	526	Open in IMG/M
3300025869\|Ga0209308_10451596	Not Available	503	Open in IMG/M
3300025880\|Ga0209534_10340361	Not Available	673	Open in IMG/M
3300025881\|Ga0209309_10073169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Marinovum → unclassified Marinovum → Marinovum sp.	1948	Open in IMG/M
3300025881\|Ga0209309_10185979	Not Available	1017	Open in IMG/M
3300025886\|Ga0209632_10088702	Not Available	1836	Open in IMG/M
3300025890\|Ga0209631_10185993	Not Available	1083	Open in IMG/M
3300025894\|Ga0209335_10430512	Not Available	522	Open in IMG/M
3300026458\|Ga0247578_1085477	Not Available	615	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	60.00%
Pelagic	Environmental → Aquatic → Marine → Pelagic	23.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	5.71%
Coastal	Environmental → Aquatic → Marine → Coastal	3.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.90%
River	Environmental → Aquatic → Freshwater → River	0.95%
Inlet	Environmental → Aquatic → Marine → Inlet	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	57.14%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	23.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	5.71%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.95%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	57.14%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	18.10%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	5.71%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	5.71%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.86%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.90%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.90%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	1.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.95%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.95%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.95%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300008791	Microbial communities from seawater in eastern North Pacific Ocean - P1 free-living McLane	Environmental	Open in IMG/M
3300008956	Marine microbial communities from eastern North Pacific Ocean - P8 free-living McLane	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019277	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300020051	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020182	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2	Environmental	Open in IMG/M
3300020185	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021085	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022922	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG	Environmental	Open in IMG/M
3300022923	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300025658	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025880	Pelagic Microbial community sample from North Sea - COGITO 998_met_07 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026458	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20156J14371_100731272	3300001347	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAHLLTKTMSKLILIKALR*
JGI20157J14317_101350661	3300001352	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKAD
Ga0075514_17751861	3300006403	Aqueous	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKN
Ga0075460_102066472	3300007234	Aqueous	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHS
Ga0103696_10150191	3300008791	Ocean Water	VLVFLFLLIATAAEAKENYSIPSKLYPPVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSN
Ga0104261_10285733	3300008956	Ocean Water	MKEIIQSNLKPSTAVLVFLFLIIATAAEAKENYSIPSKLYPQVLTMGEHIDRIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAF
Ga0102811_13659291	3300009024	Estuarine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKERDRD
Ga0115550_12111952	3300009076	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIE
Ga0115562_12298611	3300009434	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNNPIKNSAFFKARDR
Ga0115559_11839163	3300009438	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFF
Ga0115553_12009073	3300009445	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLITTAAEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAAIKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVM
Ga0115565_103617361	3300009467	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLITTAAEAKENYSIPSKLYPQVLTMGEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSA
Ga0115555_12526343	3300009476	Pelagic Marine	MKEIIQSNLKPSTAVLVSLFLIIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYMLARCSAAALLQRTTSGLLITSQKR
Ga0115570_103412232	3300009496	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDP
Ga0115569_100843094	3300009497	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYW
Ga0115569_103629662	3300009497	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWH
Ga0115567_102916311	3300009508	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADED
Ga0115567_107832832	3300009508	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNN
Ga0182083_16049191	3300016743	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMT
Ga0182095_11484071	3300016791	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDEEKAAMAKYTLARCSAAALKIISI
Ga0182095_15149801	3300016791	Salt Marsh	PKRPEVSLQRSEEAGGMKEIIQSNLKPLTTVLIFLFLLIATAAEAKENYSIPSKLYPQAFTMSEHMERIKTLDLSDKEKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDQ
Ga0181552_100309881	3300017824	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMT
Ga0181552_102075944	3300017824	Salt Marsh	LIFLFLLIATAAEAKETYSIPSKLYPQVLTMSEHMERVKALDLSDKDKAEMAKYTLARCSAAALKIIS
Ga0181607_105265582	3300017950	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAAIKIISIIDDNNDPIKN
Ga0181583_106853092	3300017952	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNS
Ga0181571_100396387	3300017957	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDD
Ga0181581_105104082	3300017962	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKALDLSNKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADE
Ga0181569_101032145	3300017986	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATVSEAKENYSIPSKLYPQVLTMSEHMERIKALDLSNKDKAEMAKYTLARCSAAALKIISIIDD
Ga0181600_103213021	3300018036	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFF
Ga0181600_106013911	3300018036	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIA
Ga0181601_100541955	3300018041	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEV
Ga0181606_100824423	3300018048	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERVKTLDLSDKDKAEMAKYTLARCSAAALKIISI
Ga0181606_104590482	3300018048	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVEAVMTARAFADEDNVK
Ga0181572_104799651	3300018049	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARGSAAALKIISIIDDNNDPIKNSAF
Ga0181561_100169638	3300018410	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDP
Ga0181560_101809784	3300018413	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDD
Ga0181560_103946502	3300018413	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMT
Ga0181560_105141682	3300018413	Salt Marsh	MKEIIQSSLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADED
Ga0181559_104122291	3300018415	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDR
Ga0181553_103246421	3300018416	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVLFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDRGIEVTK
Ga0181558_100481666	3300018417	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKETYSIPSKLYPQVLTMSEHMERVKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYW
Ga0181558_102079644	3300018417	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLNLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEA
Ga0181558_102376031	3300018417	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKAR
Ga0181558_106310831	3300018417	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVEAVMTARAFADEDNVKADL
Ga0181558_106602542	3300018417	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLVTTAAEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFF
Ga0181563_106205352	3300018420	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDRG
Ga0181593_107432183	3300018423	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKAR
Ga0181591_107132291	3300018424	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKETYSIPSKLYPQVLTMSEHMERVKALDLSDKDEAEMAKYTLARCSAAALKIISIID
Ga0181564_100302031	3300018876	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTAHAFADEDNVKADLDRGI
Ga0181564_107321592	3300018876	Salt Marsh	MKEIIQSSLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVM
Ga0182081_10542501	3300019277	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDTDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDRGI
Ga0181562_101785481	3300019459	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTA
Ga0181562_105054231	3300019459	Salt Marsh	MKEIIQSSLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIE
Ga0181562_105619671	3300019459	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMSEHMERTKALDLSDKDEAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTA
Ga0194029_10892202	3300019751	Freshwater	MKEIIQSNLKPSTAMLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDKNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADED
Ga0181555_10427746	3300020051	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDN
Ga0181595_100860965	3300020053	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKADMAKYTLARCSAAALKIISII
Ga0181595_102820221	3300020053	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKETYSIPSKLYPQVLTMSEHMERVKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDRGI
Ga0181575_105127033	3300020055	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIIS
Ga0181574_106163881	3300020056	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSNKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIE
Ga0206128_10867834	3300020166	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDY
Ga0181602_101559283	3300020173	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLVTTAAEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAAIKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAF
Ga0206124_100376934	3300020175	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNK
Ga0206129_100373387	3300020182	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDR
Ga0206129_101726383	3300020182	Seawater	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDR
Ga0206131_104554711	3300020185	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFRARDRDYWHSIAVEAVMTARAFADEDNVKA
Ga0181605_102791491	3300020188	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDD
Ga0181605_102889582	3300020188	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAAIKIISIIDDNNDPIKNSAFFKARDRDYWHSIA
Ga0181604_103305271	3300020191	Salt Marsh	MKEIIQSSLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEM
Ga0181597_101986122	3300020194	Salt Marsh	MKEIIQSSLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKEKAAMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEMTKLF
Ga0181597_103778751	3300020194	Salt Marsh	MKEIIQSNLKPLTTVLIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVM
Ga0181557_10572005	3300020601	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYW
Ga0181557_12553562	3300020601	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSINV
Ga0206677_103869001	3300021085	Seawater	VLVFLFLLIETAAEAKENYSIPSKLYPQALTMGKHMVRIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSVLFRVR
Ga0213862_102851332	3300021347	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEVT
Ga0206123_104711222	3300021365	Seawater	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDR
Ga0222718_102275531	3300021958	Estuarine Water	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAF
Ga0222716_101306424	3300021959	Estuarine Water	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSNKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTERAFADEDNVKADLDKGI
Ga0222715_101939431	3300021960	Estuarine Water	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKA
Ga0255756_11836751	3300022905	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVEAVMTAR
Ga0255775_11247884	3300022907	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTAHAFADEDN
Ga0255755_10502311	3300022909	Salt Marsh	MKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTAHAFAD
Ga0255779_10372727	3300022922	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDY
Ga0255783_101504551	3300022923	Salt Marsh	LIFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMT
Ga0255753_10327991	3300022926	Salt Marsh	LQRSEEVGVMKEIIQRNLKPLTTVLVFLFLLIATAVEAKENYSIPSKLYPQVLTMSEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTAHAFADEDN
Ga0255753_13529712	3300022926	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVECVLCKRGA
Ga0255774_104060562	3300023087	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISII
Ga0255762_104210441	3300023119	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERINALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKAR
Ga0255759_104600011	3300023178	Salt Marsh	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSNKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARD
(restricted) Ga0233438_101074744	3300024255	Seawater	VLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRD
Ga0233451_103349191	3300024301	Salt Marsh	MKEIIQSNLKPLTTVLVFLFLLIATAAEAKEDYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNSDPIKNSVFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLD
Ga0209659_11667612	3300025658	Marine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMSEHMERVKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAF
Ga0209406_12394601	3300025694	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLIIATAAEAKENYSIPSKLYPQVLTMGVHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVE
Ga0209715_12189292	3300025699	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGKHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNN
Ga0209715_12428782	3300025699	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKI
Ga0209602_12274961	3300025704	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNN
Ga0209305_12346091	3300025712	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLIIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFRARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEMTKLF
Ga0209308_104515961	3300025869	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADL
Ga0209534_103403612	3300025880	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKA
Ga0209309_100731694	3300025881	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLIIATAAEAKENYSIPSKLYPQVLTMGVHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSEFFKARDRDYWHSIA
Ga0209309_101859793	3300025881	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEA
Ga0209632_100887021	3300025886	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLIIATAAEAKENYSIPSKLYPQVLTMGVHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSEFFKARDRDYWHSIAVEAV
Ga0209631_101859931	3300025890	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLIATASEAKENYSIPSKLYPQVLTMSEHMERIKALDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIE
Ga0209335_104305121	3300025894	Pelagic Marine	MKEIIQSNLKPSTAVLVFLFLLVATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAF
Ga0247578_10854772	3300026458	Seawater	MKEIIQSHLKPSTAVLVFLFLLIATAAEAKENYSIPSKLYPQVLTMGEHMERIKTLDLSDKDKAEMAKYTLARCSAAALKIISIIDDNNDPIKNSAFFKARDRDYWHSIAVEAVMTARAFADEDNVKADLDKGIEMT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters