NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F095427

Metagenome / Metatranscriptome Family F095427

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095427
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 117 residues
Representative Sequence VLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDE
Number of Associated Samples 96
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.33 %
% of genes near scaffold ends (potentially truncated) 99.05 %
% of genes from short scaffolds (< 2000 bps) 96.19 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.810 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(29.524 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.333 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 64.35%    β-sheet: 11.30%    Coil/Unstructured: 24.35%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF01070FMN_dh 61.90
PF07519Tannase 9.52
PF02604PhdYeFM_antitox 0.95
PF03601Cons_hypoth698 0.95
PF00762Ferrochelatase 0.95
PF13472Lipase_GDSL_2 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 61.90
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 61.90
COG0276Protoheme ferro-lyase (ferrochelatase)Coenzyme transport and metabolism [H] 0.95
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.95
COG2855Uncharacterized membrane protein YadS, UPF0324 familyFunction unknown [S] 0.95
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.81 %
UnclassifiedrootN/A16.19 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003995|Ga0055438_10211571Not Available592Open in IMG/M
3300004282|Ga0066599_101204564All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria565Open in IMG/M
3300004463|Ga0063356_101558622All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria981Open in IMG/M
3300004463|Ga0063356_102179176All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria843Open in IMG/M
3300004480|Ga0062592_100113817All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1716Open in IMG/M
3300005204|Ga0068997_10033197Not Available921Open in IMG/M
3300005331|Ga0070670_100321423Not Available1356Open in IMG/M
3300005334|Ga0068869_100210726All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1536Open in IMG/M
3300005338|Ga0068868_101657366Not Available602Open in IMG/M
3300005356|Ga0070674_101157118All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria685Open in IMG/M
3300005356|Ga0070674_101205816All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria672Open in IMG/M
3300005365|Ga0070688_100157430All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1558Open in IMG/M
3300005444|Ga0070694_100416195All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1055Open in IMG/M
3300005444|Ga0070694_100509542All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria958Open in IMG/M
3300005456|Ga0070678_101590354All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria613Open in IMG/M
3300005545|Ga0070695_100545947All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria903Open in IMG/M
3300005615|Ga0070702_100035577All Organisms → cellular organisms → Bacteria → Proteobacteria2752Open in IMG/M
3300005617|Ga0068859_101863487All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria664Open in IMG/M
3300005719|Ga0068861_100399917All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1219Open in IMG/M
3300005829|Ga0074479_10293147All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria721Open in IMG/M
3300005844|Ga0068862_101639504All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria651Open in IMG/M
3300006031|Ga0066651_10069924All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300006046|Ga0066652_101325081All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria678Open in IMG/M
3300006604|Ga0074060_11904328All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300006845|Ga0075421_101556362All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria721Open in IMG/M
3300006845|Ga0075421_102077477All Organisms → cellular organisms → Bacteria → Proteobacteria603Open in IMG/M
3300006852|Ga0075433_10041841All Organisms → cellular organisms → Bacteria → Proteobacteria3972Open in IMG/M
3300006853|Ga0075420_100085232All Organisms → cellular organisms → Bacteria2795Open in IMG/M
3300006876|Ga0079217_11715297All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria506Open in IMG/M
3300006954|Ga0079219_11691361Not Available586Open in IMG/M
3300009094|Ga0111539_11343184All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria829Open in IMG/M
3300009156|Ga0111538_10178994All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2692Open in IMG/M
3300010325|Ga0134064_10427516All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300010359|Ga0126376_11664852Not Available672Open in IMG/M
3300010359|Ga0126376_12079936All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300010399|Ga0134127_10253747All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1668Open in IMG/M
3300010403|Ga0134123_11669392All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria687Open in IMG/M
3300011417|Ga0137326_1065869All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria802Open in IMG/M
3300011422|Ga0137425_1100681All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria701Open in IMG/M
3300011422|Ga0137425_1187732Not Available518Open in IMG/M
3300012884|Ga0157300_1018726All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria898Open in IMG/M
3300012891|Ga0157305_10036082All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria990Open in IMG/M
3300012891|Ga0157305_10237130Not Available542Open in IMG/M
3300012895|Ga0157309_10103802All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria790Open in IMG/M
3300012897|Ga0157285_10320227Not Available534Open in IMG/M
3300012902|Ga0157291_10278187All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria570Open in IMG/M
3300012906|Ga0157295_10301520All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria560Open in IMG/M
3300012955|Ga0164298_11638063Not Available508Open in IMG/M
3300013308|Ga0157375_12298348Not Available643Open in IMG/M
3300014166|Ga0134079_10025651All Organisms → cellular organisms → Bacteria1938Open in IMG/M
3300014299|Ga0075303_1035526Not Available799Open in IMG/M
3300014326|Ga0157380_10636037All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1062Open in IMG/M
3300014879|Ga0180062_1080911All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria725Open in IMG/M
3300015077|Ga0173483_10465818All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria665Open in IMG/M
3300015200|Ga0173480_10469050All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria747Open in IMG/M
3300015248|Ga0180079_1045531All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria635Open in IMG/M
3300015371|Ga0132258_12411341All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1318Open in IMG/M
3300016387|Ga0182040_11264285All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300017939|Ga0187775_10096208All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300018089|Ga0187774_11232903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria538Open in IMG/M
3300018422|Ga0190265_11849365All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria711Open in IMG/M
3300018432|Ga0190275_12725203All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria571Open in IMG/M
3300018469|Ga0190270_10449136All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1211Open in IMG/M
3300018481|Ga0190271_12086955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria675Open in IMG/M
3300019361|Ga0173482_10472830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria601Open in IMG/M
3300019377|Ga0190264_12124529All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria520Open in IMG/M
3300023064|Ga0247801_1089192All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria511Open in IMG/M
3300023066|Ga0247793_1061223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria616Open in IMG/M
3300025324|Ga0209640_10441019All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1069Open in IMG/M
3300025938|Ga0207704_10844554All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria767Open in IMG/M
3300025954|Ga0210135_1040219All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria515Open in IMG/M
3300026118|Ga0207675_100705163All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300026118|Ga0207675_101093597All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300026121|Ga0207683_12096839All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria514Open in IMG/M
3300027909|Ga0209382_11052741All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria844Open in IMG/M
3300027993|Ga0247749_1011305All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria877Open in IMG/M
3300028712|Ga0307285_10234023Not Available520Open in IMG/M
3300028809|Ga0247824_10662852All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria633Open in IMG/M
3300028812|Ga0247825_10549271All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria825Open in IMG/M
3300028876|Ga0307286_10156830Not Available817Open in IMG/M
3300030336|Ga0247826_11434266All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria559Open in IMG/M
3300031184|Ga0307499_10080964All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria856Open in IMG/M
3300031229|Ga0299913_11643871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria593Open in IMG/M
3300031547|Ga0310887_10054152All Organisms → cellular organisms → Bacteria1817Open in IMG/M
3300031562|Ga0310886_10586528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300031769|Ga0318526_10117269All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300031771|Ga0318546_11040016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria576Open in IMG/M
3300031847|Ga0310907_10513137All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria643Open in IMG/M
3300031854|Ga0310904_10072031All Organisms → cellular organisms → Bacteria1807Open in IMG/M
3300031858|Ga0310892_10601019All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria745Open in IMG/M
3300031858|Ga0310892_10864223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria631Open in IMG/M
3300031890|Ga0306925_12264909Not Available503Open in IMG/M
3300031908|Ga0310900_10385705All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1059Open in IMG/M
3300031943|Ga0310885_10166607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1066Open in IMG/M
3300031945|Ga0310913_10343071All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300031981|Ga0318531_10518718Not Available540Open in IMG/M
3300032005|Ga0307411_10959195All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria763Open in IMG/M
3300032012|Ga0310902_10840562All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria628Open in IMG/M
3300032075|Ga0310890_10270755All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1206Open in IMG/M
3300032144|Ga0315910_10943199All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria673Open in IMG/M
3300032157|Ga0315912_11364491All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria560Open in IMG/M
3300032179|Ga0310889_10489491All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria622Open in IMG/M
3300032211|Ga0310896_10440027All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria704Open in IMG/M
3300032770|Ga0335085_11215362All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria800Open in IMG/M
3300033433|Ga0326726_12277917Not Available526Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil14.29%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.67%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.86%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.90%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.90%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.90%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.90%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.95%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.95%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.95%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.95%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.95%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.95%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005204Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300011422Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2EnvironmentalOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012891Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014299Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014879Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10DEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015248Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300023064Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025954Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027993Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055438_1021157123300003995Natural And Restored WetlandsVKARTARSRSTKVLSPAEALGLSGAILDARVRRAVHHIPDAELAIVARRLADDALANELIYERSGTIEAVRVMLRPLLVMPEQLSYLHQVCTRVMSALSRIPDLFVRDPGVRKILPLAPDETAWFEETWSLMAQGPN
Ga0066599_10120456413300004282FreshwaterVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLADDARANGVVYVHDGVVETVRIMLRPFLIMPEQLGYLHHVCTRIMSALARFPDLYARDADVRATLPLADDERAWLEEVWPKVAHAEQPL
Ga0063356_10155862213300004463Arabidopsis Thaliana RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLEEDARANDVVYTHEGTIETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRALPLADDERAWFDEVWPAVAHAETPLYGRLDAVCDFTSARW
Ga0063356_10217917623300004463Arabidopsis Thaliana RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPRVAHAEQPLYGRLDAV
Ga0062592_10011381713300004480SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALA
Ga0068997_1003319713300005204Natural And Restored WetlandsVSTQPARRRSSKVLTPAETLGLSGAILDARVRRAVNHIPDAELDVVARRLADDARANDLIYDRDGVAEVVRVMLRPLLIMPEQLSYLHHVCARIMAALSRIPDLYARHEDVRKLLPLAP
Ga0070670_10032142313300005331Switchgrass RhizosphereVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARIPDLFMRDPDVRKILPLAPDEAAWFEETWAQIDKGTNPLYGRLDAVC
Ga0068869_10021072613300005334Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRKALPLADDERAWFDEVWPKVAHAEQP
Ga0068868_10165736613300005338Miscanthus RhizosphereVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRIMAALARIPDLFMRDSAIRKILPLAADEASWFEE
Ga0070674_10115711823300005356Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLADDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIR
Ga0070674_10120581623300005356Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPKVAH
Ga0070688_10015743013300005365Switchgrass RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARF
Ga0070694_10041619523300005444Corn, Switchgrass And Miscanthus RhizosphereLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHIARRLAEDARASDAVYTHDDGTVDTVRVMLRPLLVMPEQLGYLHHVCARVMNALARFPDLYARDPDIRKVLPLADDERAWFDEVW
Ga0070694_10050954213300005444Corn, Switchgrass And Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIR
Ga0070678_10159035423300005456Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLAADERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDSL
Ga0070695_10054594723300005545Corn, Switchgrass And Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDE
Ga0070702_10003557713300005615Corn, Switchgrass And Miscanthus RhizosphereVTRERARKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERQGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIP
Ga0068859_10186348723300005617Switchgrass RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLAADERAWFDEVWPKVAHAEQPLYG
Ga0068861_10039991713300005719Switchgrass RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPD
Ga0074479_1029314723300005829Sediment (Intertidal)MLTPSEQLGLAGAALEARVRQAVNYIPDSTLAHVAKRLADDARTNEVVYAHEGVLETVRIMLRPLLVMPEQVSYLHNVCSRIMSALARFPDLYARDAQMRRVLPL
Ga0068862_10163950413300005844Switchgrass RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALA
Ga0066651_1006992413300006031SoilVTRQRSPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDVVARRLADDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVTAALARIPDLYVRDPDVRALLPLAPDEHAWFSEIWARMDKALNPLY
Ga0066652_10132508123300006046SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARVSDVVYTHEGIVETVRVMLRPLLVMPEQLGYLHHVCTSIMSALARFPELYARDADIRKALPLADDERAWFDEVWPRVAHAEQPLYGRLDAVC
Ga0074060_1190432823300006604SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDIVARRLTDDARANDLRYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYVNDA
Ga0075421_10155636223300006845Populus RhizosphereLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARRLAEDARANDVVYVHEGTVETVRIMLRPLLVMPEQLGYLHHVCARIMNALARFPDLYARDADVRAALPLADDERA
Ga0075421_10207747713300006845Populus RhizosphereLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHIARRLAEDARASDAVYTHDDGTVDTVRVMLRPLLVMPEQLGYLHHVCARIMNALARFPDLYARDADIRTALPLADDERA
Ga0075433_1004184143300006852Populus RhizosphereLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHIARRLAEDARASDAVYTHDDGTVDTVRVMLRPLLVMPEQLGYLHHVCARVMNALARFPD
Ga0075420_10008523243300006853Populus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARSSDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKVLPLADDERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDS
Ga0079217_1171529713300006876Agricultural SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGATETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDVRRALPLADDERAWFDEVWPKVAHAEQPLYGRL
Ga0079219_1169136113300006954Agricultural SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHEGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADIRKALPLADDERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSA
Ga0111539_1134318423300009094Populus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHDGAVETVRVMLRPLLVMPEQLGYLHHVCTRITSALARFPELYARDADVRK
Ga0111538_1017899443300009156Populus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARSSDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSA
Ga0134064_1042751613300010325Grasslands SoilVTRQRSPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDVVARRLADDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVTAALARIPDLYVRDPDVRALLPLAPDEHAWFSEIWARMDKALNP
Ga0126376_1166485223300010359Tropical Forest SoilVTRPRTPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPNLYASDAQVRKLLPLAPDEAEWFVAVWA
Ga0126376_1207993623300010359Tropical Forest SoilVTSRRAAKVLTPAETLGLSGAILDARVRRAVNHIPDAELDFVARRLTDDARANDLTYERAGVIEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALA
Ga0134127_1025374733300010399Terrestrial SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLADDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALAR
Ga0134123_1166939213300010403Terrestrial SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRKALPLADDE
Ga0137326_106586923300011417SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRAVPL
Ga0137425_110068113300011422SoilLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARRLAEDARANDVVYVHEGTVETVRIMLRPLLVMPEQLGYLHHVCTRIMSALARFPELY
Ga0137425_118773223300011422SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDVRRAVPLADDERAWFDEVWPAV
Ga0157300_101872623300012884SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPRVAHAEQPLYGRLDAVCDFT
Ga0157305_1003608223300012891SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPEHYARDADVRKALPLADDER
Ga0157305_1023713013300012891SoilVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARIPDLFMRDPDVRKILPLAPDEAAW
Ga0157309_1010380213300012895SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPEHYARDADVRRALPLAADERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDSLKF
Ga0157285_1032022723300012897SoilVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARIPDLFMRDPDVRKILPLAPDEAAWFEETWAQIDKGTNPLYGRLD
Ga0157291_1027818723300012902SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKAL
Ga0157295_1030152023300012906SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVR
Ga0164298_1163806313300012955SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLRYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYANDAEVRKILPLAADEAEWFAEVWARMEQAPNPLYG
Ga0157375_1229834823300013308Miscanthus RhizosphereVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARIPDLFMRDPDVRKILPLAPDEAAWFEE
Ga0134079_1002565113300014166Grasslands SoilVTRQRSPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDVVARRLADDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVTAALARIPDLYVRDPDVRALLPLAPDEHAWFSEIWARMDK
Ga0075303_103552613300014299Natural And Restored WetlandsVKARTARSRSTKVLSPAEALGLSGAILDARVRRAVHHIPDAELAIVARRLADDALANELIYERSGTIEAVRVMLRPLLVMPEQLSYLHQVCTRVMSALSRIPDLFVRDPGVRKILPLAPDETA
Ga0157380_1063603713300014326Switchgrass RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRK
Ga0180062_108091123300014879SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYTHDGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRAVPLADDERAWFDEVWSAVAHAETPLYGRLDAVCDFTSARWQDSLRFM
Ga0173483_1046581813300015077SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALAR
Ga0173480_1046905023300015200SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPKVAHAEQPLYGRLDAVC
Ga0180079_104553113300015248SoilLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARRLAEDARANDVVYVHEGTVETVRIMLRPLLVMPEQLGYLHHVCARIMNALARFPDLYARDADVRTALPLADDER
Ga0132258_1241134113300015371Arabidopsis RhizosphereLGGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKVLPLA
Ga0182040_1126428523300016387SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPNLYVNDAEVRKLLPLARDEAEWFAEVWARMEQAPNP
Ga0187775_1009620813300017939Tropical PeatlandVPRSRAPKVLTPAETLGLSGAILDARVRRAVNHIPDSELDLVAHRLADDARANDLTYERAGVIEPVRVMLRPLLIMREQQSYLHHVCTRVMAALARIPDLYVRDAGVRALLP
Ga0187774_1123290313300018089Tropical PeatlandATKVRAASTTRRASSAGCRDAEAGVTRQRLPKVLTPAETLGLSGAILDARVRRAVNHIPDAELDIVARRLADDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYQRDSDVRALLPLGPDEHAWFAEIWAKMDQALNPLYGRLDAVCDFTSARWQDSL
Ga0190265_1184936523300018422SoilVLTPAEQLGLAGSALDARVRQAVNAIPDSTLVHVARRLAEDARASDVVYVHEGTTETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDVRRVLPLADDERAWFDEVWP
Ga0190275_1272520323300018432SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLADDARASDAVYVHDGYVDTVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRILPLADDERAWFDEVWPA
Ga0190270_1044913613300018469SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYTHDGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRAVPLADDERAWFDEVW
Ga0190271_1208695523300018481SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLADDARASDVVYVHDGYVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRRTVPLADDEHAWFEEVWPAVAHAETPLYGRLDAVCDFTSARWQDSLRFM
Ga0173482_1047283013300019361SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKVLPLADDERAWFDEVWPKVSHAEQPLYGRLDAVCDFTSARWQD
Ga0190264_1212452923300019377SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARTSDVVYVHEGTTETVRVMLRPLLVMPEQLGYLHHVCTRIMSALA
Ga0247801_108919213300023064SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPRV
Ga0247793_106122323300023066SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPEL
Ga0209640_1044101923300025324SoilLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARRLAEDARANDVVYVHEGAVETVRVMLRPLLVMPEQLGYLHHVCARIMNALARFPDLYARDPEIRTALPLA
Ga0207704_1084455413300025938Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRNAL
Ga0210135_104021923300025954Natural And Restored WetlandsVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKVLPLADDERAWFDEVWPKVAHAEQPLYGRL
Ga0207675_10070516323300026118Switchgrass RhizosphereVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARSRMRSPSTSASYAP
Ga0207675_10109359713300026118Switchgrass RhizosphereVTRERARKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERQGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAAL
Ga0207683_1209683913300026121Miscanthus RhizosphereVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLAADERAWFDEVWPKVAHAEQPLYGRL
Ga0209382_1105274113300027909Populus RhizosphereLLSPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARRLAEDARANDVVYVHEGTVETVRIMLRPLLVMPEQLGYLHHVCARIMNALARFPDLYARDADVRAALPLADDER
Ga0247749_101130513300027993SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPRVAHAEQPLYGRLDA
Ga0307285_1023402323300028712SoilVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVTT
Ga0247824_1066285223300028809SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARERTHD
Ga0247825_1054927113300028812SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVERRLAEDARASDVVYVHDGAVETVRVMLRPLLVMPEQLGYLHHVCARIMSALARFPELYARAN
Ga0307286_1015683013300028876SoilVARRRSAKVLSPAETLGLSGAILDARVRRAVNHIPDAELAIVARRLADDALANELIYERSGVVEAVRVMLRPLLVMPEQLSYLHHVCTRVMTALARIPDL
Ga0247826_1143426613300030336SoilVVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHDGAVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRSALPLADDERAWFDEVWPAVAHAETPLYGRLDAVCD
Ga0307499_1008096413300031184SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHDGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRKVLPLADDERAWFDEVWPKV
Ga0299913_1164387113300031229SoilVSTKAARRRSAKILTPAETLGLSGATLDARVRRAVNHIPDATLALIARRLADDARANDLVYERHGVTEPVRVMLRPLLVMPEQLSYLHHVCAQLMDALSRIPDLFFRDPAVRKVLPLADEETAWFNETWPLISQAASPLYGRLDAVCDFTSAGWQ
Ga0310887_1005415213300031547SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLA
Ga0310886_1058652823300031562SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLAADERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDSLK
Ga0318526_1011726923300031769SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALA
Ga0318546_1104001613300031771SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYVNDAEVRKLLPLAPDEAEWFAEVWARMEQAPNPLYGRLDAVCDFTSARWQDSLRFME
Ga0310907_1051313713300031847SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARSSDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADV
Ga0310904_1007203113300031854SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKAVPLADDERAWFDEVWPK
Ga0310892_1060101913300031858SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHEGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDSLKFM
Ga0310892_1086422313300031858SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHDGAVETVRVMLRPLLVMPEQLGYLHHVCTRITSALARFPELY
Ga0306925_1226490913300031890SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYVNDAEVRKLLPLAPDEAEWFAEVWARMEQAPNPLY
Ga0310900_1038570523300031908SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARSSDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRK
Ga0310885_1016660713300031943SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYVHDGAVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPE
Ga0310913_1034307113300031945SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYVNDA
Ga0318531_1051871813300031981SoilVTRLRIPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLTDDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPNLYVNDAEVRKLLPLARDEAEWFAEVWARMEQAPNPLYG
Ga0307411_1095919523300032005RhizosphereVLTPAEQLGLAGAALDARVRQAVNSIPDSTLVHVARRLAEDARASDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKALPLADDERA
Ga0310902_1084056223300032012SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHEGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRKALPLADDERAWFDEVWPK
Ga0310890_1027075523300032075SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARSSDVVYVHEGMVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDADVRKVLPLADDERAWFDEVWPKVAHAEQPLYGRLDAVCDFTSARWQDSLKFME
Ga0315910_1094319923300032144SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLVDDARANDVVYVHDGAVETVRIMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDVR
Ga0315912_1136449123300032157SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYTHGGTVETVRVMLRPLLVMPEQLGYLHHVCTRIMSA
Ga0310889_1048949123300032179SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHEGIVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFP
Ga0310896_1044002723300032211SoilVLTPAEQLGLAGAALDARVRQAVNFIPDSTLVHVARRLAEDARASDVVYAHEGVVETVRVMLRPLLVMPEQLGYLHHVCTRIMSALARFPELYARDPDIRKALPL
Ga0335085_1121536213300032770SoilVTRLRTPKVLTPAETLGLSGAILDARVRRAVNHIADAELDIVARRLADDARANDLTYERAGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLFVGDAEVRKLLPLAPDEAEWFAEVWARMEQAPNPLYGRLDAVCDFTSARWQD
Ga0326726_1227791713300033433Peat SoilVPRLRTPKLLTPAETLGLSGAILDARVRRAVNHIPDAELDIVARRLTDDARANDLTYERGGVLEPVRVMLRPLLIMPEQQSYLHHVCTRVMAALARIPDLYVSHAEVRKLLPLAPDEAEWFAEVWARMEQAPNPLYGRLDAVC

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.