NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F095415

Metagenome / Metatranscriptome Family F095415

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095415
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 66 residues
Representative Sequence MKEVDSDLVRTIRMNGRNQMKGEMIRWLDTHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Number of Associated Samples 65
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 4.76 %
% of genes near scaffold ends (potentially truncated) 21.90 %
% of genes from short scaffolds (< 2000 bps) 77.14 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.762 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(54.286 % of family members)
Environment Ontology (ENVO) Unclassified
(61.905 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(88.571 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.42%    β-sheet: 0.00%    Coil/Unstructured: 57.58%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00145DNA_methylase 23.81
PF01844HNH 5.71
PF08291Peptidase_M15_3 0.95
PF03354TerL_ATPase 0.95
PF08706D5_N 0.95
PF05065Phage_capsid 0.95
PF06199Phage_tail_2 0.95
PF04860Phage_portal 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0270DNA-cytosine methylaseReplication, recombination and repair [L] 23.81
COG4626Phage terminase-like protein, large subunit, contains N-terminal HTH domainMobilome: prophages, transposons [X] 0.95
COG4653Predicted phage phi-C31 gp36 major capsid-like proteinMobilome: prophages, transposons [X] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.76 %
All OrganismsrootAll Organisms35.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10020920All Organisms → Viruses → Predicted Viral3820Open in IMG/M
3300000116|DelMOSpr2010_c10026065All Organisms → Viruses → Predicted Viral2781Open in IMG/M
3300000117|DelMOWin2010_c10029817All Organisms → Viruses → Predicted Viral2677Open in IMG/M
3300000928|OpTDRAFT_10182595Not Available1133Open in IMG/M
3300000947|BBAY92_10081169Not Available869Open in IMG/M
3300003346|JGI26081J50195_1000425All Organisms → cellular organisms → Bacteria18525Open in IMG/M
3300004829|Ga0068515_117908Not Available887Open in IMG/M
3300005828|Ga0074475_10640619Not Available873Open in IMG/M
3300005828|Ga0074475_10818004Not Available699Open in IMG/M
3300005832|Ga0074469_10088677Not Available1053Open in IMG/M
3300006025|Ga0075474_10083715All Organisms → Viruses → Predicted Viral1044Open in IMG/M
3300006637|Ga0075461_10017481Not Available2366Open in IMG/M
3300006802|Ga0070749_10024259All Organisms → cellular organisms → Bacteria → Proteobacteria3821Open in IMG/M
3300006802|Ga0070749_10076914Not Available1996Open in IMG/M
3300006802|Ga0070749_10082875All Organisms → Viruses → Predicted Viral1914Open in IMG/M
3300006802|Ga0070749_10125620Not Available1505Open in IMG/M
3300006802|Ga0070749_10156971Not Available1320Open in IMG/M
3300006802|Ga0070749_10163808All Organisms → Viruses → Predicted Viral1288Open in IMG/M
3300006802|Ga0070749_10179654All Organisms → cellular organisms → Bacteria1219Open in IMG/M
3300006802|Ga0070749_10220570Not Available1081Open in IMG/M
3300006802|Ga0070749_10262904Not Available975Open in IMG/M
3300006802|Ga0070749_10327775Not Available854Open in IMG/M
3300006802|Ga0070749_10382135Not Available779Open in IMG/M
3300006802|Ga0070749_10475939Not Available682Open in IMG/M
3300006802|Ga0070749_10509481Not Available655Open in IMG/M
3300006810|Ga0070754_10318641All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300006869|Ga0075477_10300053Not Available639Open in IMG/M
3300006874|Ga0075475_10165610Not Available962Open in IMG/M
3300006916|Ga0070750_10020076All Organisms → Viruses → Predicted Viral3403Open in IMG/M
3300006916|Ga0070750_10135395All Organisms → Viruses → Predicted Viral1123Open in IMG/M
3300006916|Ga0070750_10148859Not Available1060Open in IMG/M
3300006916|Ga0070750_10237352Not Available795Open in IMG/M
3300006919|Ga0070746_10141401Not Available1177Open in IMG/M
3300006919|Ga0070746_10291945Not Available751Open in IMG/M
3300006919|Ga0070746_10342649Not Available679Open in IMG/M
3300007234|Ga0075460_10097097Not Available1062Open in IMG/M
3300007236|Ga0075463_10225050Not Available604Open in IMG/M
3300007344|Ga0070745_1012613All Organisms → Viruses → Predicted Viral3947Open in IMG/M
3300007344|Ga0070745_1255754All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300007346|Ga0070753_1335251Not Available535Open in IMG/M
3300007545|Ga0102873_1037414All Organisms → Viruses → Predicted Viral1490Open in IMG/M
3300007553|Ga0102819_1017722Not Available1216Open in IMG/M
3300007554|Ga0102820_1175186Not Available519Open in IMG/M
3300007640|Ga0070751_1068833All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin1391509Open in IMG/M
3300007640|Ga0070751_1098879All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1208Open in IMG/M
3300007640|Ga0070751_1338538Not Available554Open in IMG/M
3300007681|Ga0102824_1104019Not Available745Open in IMG/M
3300009024|Ga0102811_1107230Not Available1045Open in IMG/M
3300009480|Ga0127405_1225371Not Available507Open in IMG/M
3300010297|Ga0129345_1357847Not Available502Open in IMG/M
3300017950|Ga0181607_10057421Not Available2606Open in IMG/M
3300017950|Ga0181607_10065995Not Available2384Open in IMG/M
3300017967|Ga0181590_10907409Not Available579Open in IMG/M
3300018041|Ga0181601_10083812Not Available2113Open in IMG/M
3300018416|Ga0181553_10278962Not Available937Open in IMG/M
3300018420|Ga0181563_10053459All Organisms → cellular organisms → Bacteria2836Open in IMG/M
3300018420|Ga0181563_10474194Not Available706Open in IMG/M
3300018424|Ga0181591_10078993Not Available2720Open in IMG/M
3300019938|Ga0194032_1000159Not Available7581Open in IMG/M
3300020053|Ga0181595_10293307Not Available669Open in IMG/M
3300020177|Ga0181596_10179309Not Available946Open in IMG/M
3300021313|Ga0210333_1127438Not Available507Open in IMG/M
3300021336|Ga0210307_1064250Not Available747Open in IMG/M
3300021337|Ga0210341_1302620Not Available579Open in IMG/M
3300021389|Ga0213868_10468513Not Available683Open in IMG/M
3300021959|Ga0222716_10311288Not Available947Open in IMG/M
3300021959|Ga0222716_10702050Not Available537Open in IMG/M
3300021960|Ga0222715_10439958Not Available704Open in IMG/M
3300021961|Ga0222714_10002927All Organisms → cellular organisms → Bacteria17738Open in IMG/M
3300021961|Ga0222714_10137623All Organisms → Viruses → Predicted Viral1483Open in IMG/M
3300021961|Ga0222714_10576917Not Available565Open in IMG/M
3300022050|Ga0196883_1002013Not Available2282Open in IMG/M
3300022057|Ga0212025_1042522Not Available781Open in IMG/M
3300022158|Ga0196897_1030254Not Available653Open in IMG/M
3300022183|Ga0196891_1002266All Organisms → Viruses → Predicted Viral4157Open in IMG/M
3300022198|Ga0196905_1093937All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter fermentans806Open in IMG/M
3300025543|Ga0208303_1012401Not Available2591Open in IMG/M
3300025671|Ga0208898_1064083All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1255Open in IMG/M
3300025671|Ga0208898_1081996All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300025671|Ga0208898_1115904All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300025671|Ga0208898_1159504All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300025684|Ga0209652_1001577All Organisms → cellular organisms → Bacteria18533Open in IMG/M
3300025759|Ga0208899_1049551Not Available1807Open in IMG/M
3300025840|Ga0208917_1121785All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300025889|Ga0208644_1001600All Organisms → cellular organisms → Bacteria18793Open in IMG/M
3300025889|Ga0208644_1064112Not Available1960Open in IMG/M
3300025889|Ga0208644_1094474All Organisms → cellular organisms → Bacteria1489Open in IMG/M
3300025889|Ga0208644_1114627All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300025889|Ga0208644_1200201Not Available868Open in IMG/M
3300025889|Ga0208644_1214188Not Available825Open in IMG/M
3300025889|Ga0208644_1261032All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Spirosomaceae → Dyadobacter → Dyadobacter fermentans710Open in IMG/M
3300025889|Ga0208644_1383396Not Available523Open in IMG/M
3300027185|Ga0208672_1000144Not Available18589Open in IMG/M
3300027571|Ga0208897_1018062All Organisms → Viruses → Predicted Viral2027Open in IMG/M
3300027571|Ga0208897_1058445Not Available1017Open in IMG/M
3300027757|Ga0208671_10066713Not Available1330Open in IMG/M
3300031539|Ga0307380_10537947All Organisms → Viruses → Predicted Viral1019Open in IMG/M
3300031565|Ga0307379_10632654Not Available974Open in IMG/M
3300031565|Ga0307379_11514012Not Available534Open in IMG/M
3300031578|Ga0307376_10349736Not Available980Open in IMG/M
3300031673|Ga0307377_10831969Not Available636Open in IMG/M
3300034374|Ga0348335_028914All Organisms → Viruses → Predicted Viral2479Open in IMG/M
3300034374|Ga0348335_057522All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300034374|Ga0348335_158954Not Available606Open in IMG/M
3300034418|Ga0348337_035186All Organisms → Viruses → Predicted Viral2230Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous54.29%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.52%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh9.52%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water5.71%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil4.76%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.86%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)2.86%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.90%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.90%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.95%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater0.95%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.95%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.95%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.95%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.95%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000947Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92Host-AssociatedOpen in IMG/M
3300003346Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNAEnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005828Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.182_BBIEnvironmentalOpen in IMG/M
3300005832Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBBEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007545Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3EnvironmentalOpen in IMG/M
3300007553Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689EnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300009024Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705EnvironmentalOpen in IMG/M
3300009480Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 10m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019938Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW8Nov16_MGEnvironmentalOpen in IMG/M
3300020053Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020177Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021313Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.304 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021336Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021337Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022158Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025684Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027185Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689 (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300027757Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1002092073300000101MarineMKELDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
DelMOSpr2010_1002606543300000116MarineMKELDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV*
DelMOWin2010_1002981743300000117MarineMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNK*
OpTDRAFT_1018259533300000928Freshwater And MarineMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGEHPKASALDLVKHFCGTIWMSGGLEDGRYKEGQNYNP*
BBAY92_1008116923300000947Macroalgal SurfaceMSHEVSSDLVKQIRYNGCNQMKGDMIRWLGEHPKGTALDLVKHFCGTIWMGSGQDDGRYKEGQNFTP*
JGI26081J50195_100042543300003346MarineMAHEVDAQLVQQIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK*
Ga0068515_11790833300004829Marine WaterMAHEVSSDLVKTIRMNGCNQMKGDMIRWLGEHPKASALDLVKHFCGTIWMGSGQDDGAYTEGQNFNR*
Ga0074475_1064061923300005828Sediment (Intertidal)MAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK*
Ga0074475_1081800413300005828Sediment (Intertidal)MKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGGLEDGRYKEGQNYNP*
Ga0074469_1008867713300005832Sediment (Intertidal)MKELDTELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP*
Ga0075474_1008371523300006025AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDAHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0075461_1001748133300006637AqueousMREVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
Ga0070749_1002425953300006802AqueousMSQEVNSDLVRTIQQSGCNQMKGDMIRWLGEHPKATALELVKHFCGTIWMGSGTEDGAYKEGQNYNL*
Ga0070749_1007691413300006802AqueousKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0070749_1008287523300006802AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV*
Ga0070749_1012562043300006802AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0070749_1015697133300006802AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV*
Ga0070749_1016380813300006802AqueousHQREMKEVDSSLVRTIRMNGRNQMKGEMIRWIDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV*
Ga0070749_1017965433300006802AqueousMSHEVNSDLVKTIRQNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMGSGTEDGAYKEGQNFVR*
Ga0070749_1022057033300006802AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV*
Ga0070749_1026290413300006802AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDAHPKATALDLVKHFCGTMWMSGSLEDGRYKEGQNYNP*
Ga0070749_1032777523300006802AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV*
Ga0070749_1038213513300006802AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKATALDLVKHFCGTIWMSGGLEDGRYKEGQNFNP*
Ga0070749_1047593913300006802AqueousMKEVDSDLVRTIRMNGRNQMKGEMIRWLDTHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0070749_1050948113300006802AqueousMAHEVSSDLVKTIRMNGCNQMKGDMIRWLGEHPNASALDLVKHFCGTIWMSGGLEDGRYKEGQNFNP*
Ga0070754_1031864123300006810AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKASAFDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0075477_1030005313300006869AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKASAFDLVKHFCGTIWMSGSLEDGRFKEGQNYNP*
Ga0075475_1016561013300006874AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKDGQNFNP*
Ga0070750_1002007643300006916AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
Ga0070750_1013539523300006916AqueousMREVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMAGGTEDGRHKEGQNYNV*
Ga0070750_1014885913300006916AqueousMKEVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV*
Ga0070750_1023735213300006916AqueousMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0070746_1014140123300006919AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV*
Ga0070746_1029194523300006919AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
Ga0070746_1034264913300006919AqueousMREVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0075460_1009709723300007234AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNL*
Ga0075463_1022505013300007236AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMAGGTEDGRHKEGQNYNV*
Ga0070745_101261333300007344AqueousMAYEVDAQLVQQIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK*
Ga0070745_125575413300007344AqueousMREVDSDLVKTIRMNGCNQMKGDMIRWLGEHPNASALDLVKHFCGTIWMSGGLEDGRYKEGQNFNP*
Ga0070753_133525123300007346AqueousMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGEHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP*
Ga0102873_103741423300007545EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYNR*
Ga0102819_101772223300007553EstuarineMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRFKEGQNYNR*
Ga0102820_117518613300007554EstuarineDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK*
Ga0070751_106883333300007640AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKATALDLVKHFCGTMWMSGSVEDGRYKEGQNFNP*
Ga0070751_109887913300007640AqueousMREVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNFNP*
Ga0070751_133853823300007640AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQ
Ga0102824_110401923300007681EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRFKEGQNFNL*
Ga0102811_110723013300009024EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLDTHPHASAVDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
Ga0127405_122537113300009480Meromictic PondMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR*
Ga0129345_135784723300010297Freshwater To Marine Saline GradientMSHEVSSDLVKTIRQNGCHQMKGDMIRWLGEHPNASALELVKHFCGTIWMGGGTED
Ga0181607_1005742143300017950Salt MarshMKEVDSELVRTIRMNGRNQMKGEMIRWLDAHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0181607_1006599533300017950Salt MarshMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKASAFDLVKHFCGTIWMSGSLEDGRFKEGQNYNP
Ga0181590_1090740913300017967Salt MarshMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMGSGQDDGRHQEGQNFNR
Ga0181601_1008381223300018041Salt MarshMAHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGGLEDGRYKEGQNFNP
Ga0181553_1027896213300018416Salt MarshMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0181563_1005345943300018420Salt MarshMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0181563_1047419413300018420Salt MarshREMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR
Ga0181591_1007899363300018424Salt MarshMRHEVSSDLVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMGSGQDDGRHQEGQNFNR
Ga0194032_100015943300019938FreshwaterMSHEVSSDLVKTIRMNGCNQMKGDMIRWLGEHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0181595_1029330713300020053Salt MarshDSELVRTIRMNGRNQMKGEMIRWLDAHPKATALDLVKHFCGTIWMSGGLEDGRYKEGQNYNP
Ga0181596_1017930933300020177Salt MarshMREVDSDLVKTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGGLEDGRYKEGQNFNP
Ga0210333_112743813300021313EstuarineLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNFNP
Ga0210307_106425043300021336EstuarineMSHEVNSDLVKTIRYNGCHQLKGDMIRWLGEHPNASALDLVKHFCGTRWMGGSTEDGAYKEGYNFN
Ga0210341_130262033300021337EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYNR
Ga0213868_1046851313300021389SeawaterMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV
Ga0222716_1031128833300021959Estuarine WaterTRKLMKEVDSSLVRTIRMNGQNQLKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRFKEGQNYNR
Ga0222716_1070205013300021959Estuarine WaterMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRFKEGQNYNR
Ga0222715_1043995823300021960Estuarine WaterMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR
Ga0222714_10002927263300021961Estuarine WaterMAHKVSSDLVKEIRMNGCNQMKGDMIRWLGEHPNASALDLVKHFCGTIWMSGGTEDGRYKEGQNFNP
Ga0222714_1013762323300021961Estuarine WaterMSREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNK
Ga0222714_1057691713300021961Estuarine WaterMSHEVNSDLVKTIRQNGCHQMKGDMIRWLGEHPNASALDLVKHFCGTIWMGGGTEDGRYKEGQNFNA
Ga0196883_100201363300022050AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDAHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0212025_104252223300022057AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV
Ga0196897_103025413300022158AqueousRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV
Ga0196891_100226673300022183AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR
Ga0196905_109393723300022198AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMSGGTEDGRHKEGQNYNI
Ga0208303_101240143300025543AqueousMAHKVSSDLVKTIRMNGCNQMKGDMIRWLGEHPNASALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0208898_106408313300025671AqueousMKEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNV
Ga0208898_108199633300025671AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0208898_111590423300025671AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKASAFDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0208898_115950413300025671AqueousREMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0209652_100157783300025684MarineMAHEVDAQLVQQIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK
Ga0208899_104955113300025759AqueousVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0208917_112178533300025840AqueousHQREMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0208644_100160053300025889AqueousMSQEVNSDLVRTIQQSGCNQMKGDMIRWLGEHPKATALELVKHFCGTIWMGSGTEDGAYKEGQNYNL
Ga0208644_106411213300025889AqueousVKTIRMNGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0208644_109447433300025889AqueousRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTMWMSGSLEDGRYKEGQNFNP
Ga0208644_111462723300025889AqueousMSQEVNSDLVRTIQQSGCNQMKGDMIRWLGENPKASALDLVKHFCGTIWMGSGTEDGAYKEGQNFVR
Ga0208644_120020123300025889AqueousMKEVDSDLVRTIRMNGRNQMKGEMIRWLDTHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0208644_121418823300025889AqueousMKEVDSELVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNR
Ga0208644_126103223300025889AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV
Ga0208644_138339623300025889AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRHKEGQNYNV
Ga0208672_1000144193300027185EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK
Ga0208897_101806283300027571EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDG
Ga0208897_105844533300027571EstuarineMKEVDSSLVRTIRMNGRNQMKGEMIRWLDAHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNFNP
Ga0208671_1006671333300027757EstuarineMAHEVDAQLVQEIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRFKEGQNFNL
Ga0307380_1053794723300031539SoilMREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR
Ga0307379_1063265433300031565SoilMKEVDSDLVRTIRMNGRNQMKGEIIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNR
Ga0307379_1151401223300031565SoilMREVDSELVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0307376_1034973613300031578SoilEVDSSLVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0307377_1083196913300031673SoilLVRTIRMNGRNQMKGEMIRWLDTHPKATALDLVKHFCGTIWMSGSLEDGRYKEGQNYNP
Ga0348335_028914_1137_13403300034374AqueousMAYEVDAQLVQQIRRAGCHQMKGDMIRWLNLHPKATALELVKHFCGTLWMSGSLEDGRYKEGQNYIK
Ga0348335_057522_686_8893300034374AqueousMAHKVSSDLVKEIRMNGCNQMKGDMIRWLNNNPKATALDLVKHFCGTIWMSGSLEDGRYKDGQNFNP
Ga0348335_158954_430_6063300034374AqueousVRTIRMNGRNQMKGEMIRWLDTHPKASALDLVKHFCGTIWMSGSLEDGRYKEGQNFNP
Ga0348337_035186_1239_14483300034418AqueousMREVDSDLVRTIRMNGRNQMKGEMIRWLDTHPHASALDLVKHFCGTIWMGGGTEDGRYKEGQNYNVWEC


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