Metagenome Family F095342

Basic Information
Family ID	F095342
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	47 residues
Representative Sequence	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKENEDE
Number of Associated Samples	83
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.85 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	73.33 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Unclassified (45.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (28.571 % of family members)
Environment Ontology (ENVO)	Unclassified (82.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (93.333 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 0.00% Coil/Unstructured: 62.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03592	Terminase_2	2.86
PF13481	AAA_25	1.90
PF01381	HTH_3	0.95
PF10263	SprT-like	0.95
PF07275	ArdA	0.95
PF10926	DUF2800	0.95
PF16786	RecA_dep_nuc	0.95
PF13155	Toprim_2	0.95
PF13479	AAA_24	0.95
PF03237	Terminase_6N	0.95
PF12957	DUF3846	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	2.86
COG4734	Antirestriction protein ArdA	Defense mechanisms [V]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.29 %
Unclassified	root	N/A	45.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
cellular organisms	root	All Organisms → cellular organisms	32.38 %
Viruses	superkingdom	All Organisms → Viruses	21.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.38 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	4.76 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.95 %
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	11.43 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.81 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	2.86 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2.86 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.90 %
Woeseiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae	1.90 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	2.86 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	1.90 %
Siphoviridae sp. ctmxA102	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	0.95 %
unclassified Woeseiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae	0.95 %
Woeseia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.81 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.86 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	1.90 %
unclassified Woeseia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia	0.95 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.95 %
Siphoviridae sp. ctmxA102	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	2.86 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.86 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1.90 %
Woeseia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	0.95 %
Winogradskyella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella	0.95 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.95 %
Siphoviridae sp. ctmxA102	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	2.86 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.86 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1.90 %
unclassified Winogradskyella	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella	0.95 %
Woeseia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	0.95 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.95 %
Siphoviridae sp. ctmxA102	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.95 %
Gammaproteobacteria bacterium TMED104	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3.81 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	2.86 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.86 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1.90 %
Winogradskyella sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	0.95 %
Woeseia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	0.95 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.95 %
Siphoviridae sp. ctmxA102	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	0.95 %
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10076645	Not Available	1505	Open in IMG/M
3300000101\|DelMOSum2010_c10090473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1312	Open in IMG/M
3300000101\|DelMOSum2010_c10110899	Not Available	1108	Open in IMG/M
3300001472\|JGI24004J15324_10060428	All Organisms → Viruses → Predicted Viral	1090	Open in IMG/M
3300001589\|JGI24005J15628_10119047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	853	Open in IMG/M
3300001718\|JGI24523J20078_1039031	Not Available	524	Open in IMG/M
3300002483\|JGI25132J35274_1001239	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	6759	Open in IMG/M
3300005837\|Ga0078893_11511321	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300006025\|Ga0075474_10259933	Not Available	521	Open in IMG/M
3300006735\|Ga0098038_1009668	All Organisms → Viruses → Predicted Viral	3794	Open in IMG/M
3300006735\|Ga0098038_1011828	All Organisms → Viruses → Predicted Viral	3406	Open in IMG/M
3300006735\|Ga0098038_1032146	Not Available	1955	Open in IMG/M
3300006735\|Ga0098038_1274236	Not Available	528	Open in IMG/M
3300006749\|Ga0098042_1026581	Not Available	1666	Open in IMG/M
3300006749\|Ga0098042_1100207	Not Available	735	Open in IMG/M
3300006802\|Ga0070749_10705890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	539	Open in IMG/M
3300006810\|Ga0070754_10399798	Not Available	601	Open in IMG/M
3300006916\|Ga0070750_10229631	Not Available	812	Open in IMG/M
3300006921\|Ga0098060_1158035	Not Available	627	Open in IMG/M
3300006929\|Ga0098036_1114253	Not Available	828	Open in IMG/M
3300006929\|Ga0098036_1145004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	726	Open in IMG/M
3300006990\|Ga0098046_1131361	Not Available	543	Open in IMG/M
3300007276\|Ga0070747_1344608	Not Available	509	Open in IMG/M
3300007345\|Ga0070752_1086856	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	1359	Open in IMG/M
3300007346\|Ga0070753_1293142	Not Available	582	Open in IMG/M
3300007539\|Ga0099849_1345728	Not Available	529	Open in IMG/M
3300007778\|Ga0102954_1271021	Not Available	513	Open in IMG/M
3300008050\|Ga0098052_1020677	All Organisms → Viruses → Predicted Viral	3135	Open in IMG/M
3300008217\|Ga0114899_1001041	All Organisms → cellular organisms → Bacteria	17122	Open in IMG/M
3300008218\|Ga0114904_1038914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1285	Open in IMG/M
3300008219\|Ga0114905_1071112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1245	Open in IMG/M
3300008516\|Ga0111033_1054793	Not Available	6015	Open in IMG/M
3300009027\|Ga0102957_1296641	Not Available	591	Open in IMG/M
3300009074\|Ga0115549_1048577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1521	Open in IMG/M
3300009414\|Ga0114909_1002172	All Organisms → cellular organisms → Bacteria	9784	Open in IMG/M
3300009481\|Ga0114932_10273378	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300009603\|Ga0114911_1003668	All Organisms → cellular organisms → Bacteria	6524	Open in IMG/M
3300009603\|Ga0114911_1203055	Not Available	537	Open in IMG/M
3300009604\|Ga0114901_1039104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	1702	Open in IMG/M
3300009605\|Ga0114906_1203645	Not Available	661	Open in IMG/M
3300010153\|Ga0098059_1151823	Not Available	912	Open in IMG/M
3300012919\|Ga0160422_10020226	All Organisms → Viruses → Predicted Viral	3864	Open in IMG/M
3300012919\|Ga0160422_10693035	Not Available	650	Open in IMG/M
3300012920\|Ga0160423_10132615	All Organisms → Viruses → Predicted Viral	1753	Open in IMG/M
3300012920\|Ga0160423_10346430	All Organisms → Viruses → Predicted Viral	1019	Open in IMG/M
3300012920\|Ga0160423_10383623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	961	Open in IMG/M
3300012952\|Ga0163180_10316845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1114	Open in IMG/M
3300012953\|Ga0163179_10001921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	14600	Open in IMG/M
3300012953\|Ga0163179_10049739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	2884	Open in IMG/M
3300017697\|Ga0180120_10026934	Not Available	2671	Open in IMG/M
3300017708\|Ga0181369_1056353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	870	Open in IMG/M
3300017710\|Ga0181403_1137494	Not Available	510	Open in IMG/M
3300017714\|Ga0181412_1011778	All Organisms → Viruses → Predicted Viral	2618	Open in IMG/M
3300017748\|Ga0181393_1080275	Not Available	856	Open in IMG/M
3300017749\|Ga0181392_1065981	All Organisms → Viruses → Predicted Viral	1099	Open in IMG/M
3300017756\|Ga0181382_1065706	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300017760\|Ga0181408_1048599	All Organisms → Viruses → Predicted Viral	1138	Open in IMG/M
3300017950\|Ga0181607_10084274	All Organisms → Viruses → Predicted Viral	2044	Open in IMG/M
3300020053\|Ga0181595_10361340	Not Available	574	Open in IMG/M
3300020336\|Ga0211510_1021682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	1686	Open in IMG/M
3300020336\|Ga0211510_1050269	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300020392\|Ga0211666_10029183	All Organisms → Viruses → Predicted Viral	2501	Open in IMG/M
3300020394\|Ga0211497_10134824	Not Available	974	Open in IMG/M
3300020404\|Ga0211659_10002685	Not Available	9491	Open in IMG/M
3300020404\|Ga0211659_10015035	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	3838	Open in IMG/M
3300020404\|Ga0211659_10346318	Not Available	649	Open in IMG/M
3300020419\|Ga0211512_10000206	All Organisms → cellular organisms → Bacteria	35054	Open in IMG/M
3300020419\|Ga0211512_10000436	All Organisms → cellular organisms → Bacteria → Proteobacteria	25589	Open in IMG/M
3300020436\|Ga0211708_10370978	Not Available	586	Open in IMG/M
3300020439\|Ga0211558_10494915	Not Available	558	Open in IMG/M
3300020442\|Ga0211559_10244018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → Woeseia → unclassified Woeseia → Woeseia sp.	843	Open in IMG/M
3300020442\|Ga0211559_10248665	Not Available	834	Open in IMG/M
3300020474\|Ga0211547_10222925	Not Available	965	Open in IMG/M
3300021957\|Ga0222717_10308743	Not Available	900	Open in IMG/M
3300021957\|Ga0222717_10732603	Not Available	502	Open in IMG/M
3300022061\|Ga0212023_1021849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300022066\|Ga0224902_101092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	1315	Open in IMG/M
3300022071\|Ga0212028_1050369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	777	Open in IMG/M
3300022167\|Ga0212020_1049266	Not Available	715	Open in IMG/M
3300024344\|Ga0209992_10007565	Not Available	7349	Open in IMG/M
(restricted) 3300024520\|Ga0255047_10328276	Not Available	773	Open in IMG/M
3300025071\|Ga0207896_1058705	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctmxA102	618	Open in IMG/M
3300025086\|Ga0208157_1006270	All Organisms → Viruses → Predicted Viral	4225	Open in IMG/M
3300025086\|Ga0208157_1028965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1613	Open in IMG/M
3300025101\|Ga0208159_1000812	All Organisms → cellular organisms → Bacteria	12150	Open in IMG/M
3300025101\|Ga0208159_1029261	Not Available	1262	Open in IMG/M
3300025108\|Ga0208793_1030508	All Organisms → Viruses → Predicted Viral	1799	Open in IMG/M
3300025127\|Ga0209348_1072194	Not Available	1116	Open in IMG/M
3300025133\|Ga0208299_1012392	All Organisms → Viruses → Predicted Viral	4129	Open in IMG/M
3300025138\|Ga0209634_1210338	Not Available	736	Open in IMG/M
3300025151\|Ga0209645_1005991	Not Available	5221	Open in IMG/M
3300025151\|Ga0209645_1019127	All Organisms → Viruses → Predicted Viral	2629	Open in IMG/M
3300025151\|Ga0209645_1051055	All Organisms → Viruses → Predicted Viral	1450	Open in IMG/M
3300025251\|Ga0208182_1076313	Not Available	639	Open in IMG/M
3300025264\|Ga0208029_1001516	All Organisms → cellular organisms → Bacteria	10079	Open in IMG/M
3300025610\|Ga0208149_1060394	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300025652\|Ga0208134_1003544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium TMED104	7945	Open in IMG/M
3300025653\|Ga0208428_1018094	All Organisms → Viruses → Predicted Viral	2346	Open in IMG/M
3300025671\|Ga0208898_1172833	Not Available	555	Open in IMG/M
3300025674\|Ga0208162_1153213	Not Available	629	Open in IMG/M
3300025816\|Ga0209193_1060056	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1028	Open in IMG/M
3300027827\|Ga0209035_10099874	Not Available	1434	Open in IMG/M
3300028125\|Ga0256368_1014827	All Organisms → Viruses → Predicted Viral	1347	Open in IMG/M
3300029319\|Ga0183748_1117798	Not Available	580	Open in IMG/M
3300029448\|Ga0183755_1045663	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.	1143	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.10%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.90%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	45.71%
Coastal	Environmental → Aquatic → Marine → Coastal	19.05%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.14%
Strait	Environmental → Aquatic → Marine → Strait	6.67%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.90%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.90%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.90%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.90%
Inlet	Environmental → Aquatic → Marine → Inlet	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	40.95%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	18.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.14%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.67%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.76%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.86%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.95%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.95%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	28.57%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	15.24%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.24%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	9.52%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.67%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.86%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.86%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.86%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.90%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.90%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.90%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.95%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.95%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.95%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.95%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.95%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.95%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001718	Marine viral communities from the Pacific Ocean - LP-48	Environmental	Open in IMG/M
3300002483	Marine viral communities from the Pacific Ocean - ETNP_6_30	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300006990	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008217	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009414	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009603	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_904	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017708	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020474	Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300022061	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)	Environmental	Open in IMG/M
3300022066	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300024520 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025251	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)	Environmental	Open in IMG/M
3300025264	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s12 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095342

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_100766452	3300000101	Marine	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKENEDED*
DelMOSum2010_100904734	3300000101	Marine	MNKTEIIAEVRSICNANENNPYCSVYWLADMIMDIVDSADLKENEDE*
DelMOSum2010_101108993	3300000101	Marine	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIMDIVDSADLKENEDE*
JGI24004J15324_100604283	3300001472	Marine	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSGDLKEEVAN
JGI24005J15628_101190471	3300001589	Marine	IAEIRSLCNANENNPYCSVYWLADLIMDIVDSGDLKEEVSND*
JGI24523J20078_10390311	3300001718	Marine	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSGDLK
JGI25132J35274_100123912	3300002483	Marine	MDKKEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLKEDNRT*
Ga0078893_115113218	3300005837	Marine Surface Water	MSKSEMIAEIESLCNANKNNPYCSVYWLADMIKEVVDSPNLKESENDSA*
Ga0075474_102599332	3300006025	Aqueous	MNKTEMIAEIRSLCNANENNPYCSIYWLADMIKEIVDSPDLKENEDETKI*
Ga0098038_10096684	3300006735	Marine	MNKSEMIAEIESLCKANKNNPYCSVYWLADMIKEVVDSTDLKENEDE*
Ga0098038_10118283	3300006735	Marine	MNKSEMIAEIESLCKANKNNPYCSIYWLADMIKEVVDSTDLEENEDEDV*
Ga0098038_10321466	3300006735	Marine	MSKAEMIEKIRTLIIANKDNDNCSVYWLADMIREIIDSIDLQNGEVK*
Ga0098038_12742361	3300006735	Marine	MSNKAMMIEEIEILIKSNKDNPHCSVFWLADMIKKIVTDPDLTEEELSE*
Ga0098042_10265816	3300006749	Marine	MTNKAMMIEEIEILIKSNKDNPHCSVFWLADMIKKIVTDPDLTEEELSE*
Ga0098042_11002072	3300006749	Marine	MRNKAMMIEEIEILIKANKDNPHCSVFWLADMIKQIVTDPDLTEEELSKK*
Ga0070749_107058903	3300006802	Aqueous	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSADLKEEVSND*
Ga0070754_103997982	3300006810	Aqueous	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSADLKEEVSNDRT*
Ga0070750_102296313	3300006916	Aqueous	MSKSEMIAEIRSLCNANENNPYCSVYWLADMIKEIVDSPDLKETENDN*
Ga0098060_11580353	3300006921	Marine	MKKSEMIAEIESLCKANKNNPYCSVYWLADMIKEVVDSTDLKENEDE*
Ga0098036_11142533	3300006929	Marine	MNKSEMIAEIESLCKANKNNPYCSVYWLADMIKEVVDSTDLEENEDEDV*
Ga0098036_11450041	3300006929	Marine	KAEMIEKIRTLIIANKDNDNCSVYWLADMIREIIDSIDLQNSEVK*
Ga0098046_11313612	3300006990	Marine	MSKAEMIEKIRTLIIATKDNDNCSVYWLADMIREIIDSIDLQNGEVK*
Ga0070747_13446081	3300007276	Aqueous	MMNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKETEVEPAQ*
Ga0070752_10868566	3300007345	Aqueous	MNKTEMIAEIRSLCNANENNTYCSIYWLADMIKEIVDSPDLKENEDETKI*
Ga0070753_12931424	3300007346	Aqueous	MNKTEMIAEIRSLCNANENNPYCSIYWLADMIKEIVNSPDLKESENDTA*
Ga0099849_13457284	3300007539	Aqueous	MDKIEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLTEDNRT*
Ga0102954_12710212	3300007778	Water	MSKTEMIAEIKSLCNANENNPYCSIYWLADMIKEIVNSPDLKENEDEN*
Ga0098052_102067713	3300008050	Marine	MSKSEMIEDIETLIKANKDNDNCSVYWLADMIKEIVDSPDLKENEDEPME*
Ga0114899_10010416	3300008217	Deep Ocean	MDKKEMIEDIETLIKANKDNDNCSIYWLADMIKEIVDSSDLKEEVPHETI*
Ga0114904_10389143	3300008218	Deep Ocean	MSKSEMIAEIKSLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDE*
Ga0114905_10711121	3300008219	Deep Ocean	MRRPKMSKSEMIAEIKSLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDE*
Ga0111033_10547938	3300008516	Marine Sediment	MSKTEMIAEIKSLCNANENNPYCSIYWLADMIKEIVNSPDLKENEDE*
Ga0102957_12966411	3300009027	Pond Water	QGGTKMSKTEMIAEIKSLCNANENNPYCSIYWLADMIKEIVNSPDLKENEDEN*
Ga0115549_10485774	3300009074	Pelagic Marine	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKETEDED*
Ga0114909_10021721	3300009414	Deep Ocean	MKSRRVKMSKSEMIEDIETLIKANKDNDNCSIYWLADMIKEIVDSSDLKEEVPHETI*
Ga0114932_102733783	3300009481	Deep Subsurface	MSKSEMIAEIESLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDER*
Ga0114911_100366811	3300009603	Deep Ocean	IETLIKANKDNDNCSIYWLADMIKEIVDSSDLKEEVPHETI*
Ga0114911_12030552	3300009603	Deep Ocean	MSKEEMIEEIELLCKANKNNADCSVYWLANMIKEIVDSSDLIEEEA*
Ga0114901_10391044	3300009604	Deep Ocean	YVMRRPKMSKSEMIAEIKSLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDE*
Ga0114906_12036453	3300009605	Deep Ocean	MSKEEMIEEIELLCKANKNNADCSVYWLADMIKEIVDSSDLIEEEA*
Ga0098059_11518231	3300010153	Marine	RTKMNKSEMIAEIESLCKANKNNPYCSVYWLADMIKEVVDSTDLKENEDE*
Ga0160422_100202268	3300012919	Seawater	VDKIEMINEIQSLCKANKDNPYCSIYWLADMIKEIVDSPDLIEEEINGEL*
Ga0160422_106930353	3300012919	Seawater	MDKIKMIDEIQSLCKANKDNPYCSIYWLADMIKEIVDSIDLTEDNRT*
Ga0160423_101326157	3300012920	Surface Seawater	MSKKEMVEEIESLCKANKNNPYCSVYWLADMIKEIVNNPDLTEED*
Ga0160423_103464304	3300012920	Surface Seawater	VDKIEMINEIQSLCKANKDNPYCSIYWLADMIKEIVDSPDLIEEELNEV*
Ga0160423_103836232	3300012920	Surface Seawater	MNKQEMINEIQSLCKANKDNPYCSVYWLANMIKEIVDSPDLTESNHE*
Ga0163180_103168453	3300012952	Seawater	MNKQEMINEIQLLCKSNKDNPYCSVYWLANMIKQIVDSSDLTESNHE*
Ga0163179_1000192118	3300012953	Seawater	MTKEEMIEEIQSLCKANKNNPYCSVYWLADMIKEIVDSSDLIEEDA*
Ga0163179_100497391	3300012953	Seawater	MNKEEMIEEIQLLCKANKNNPDCSVYWLANMIKEIVDSPDLTEEEPK*
Ga0180120_100269348	3300017697	Freshwater To Marine Saline Gradient	MNKTEMIAEIRSLCNANENNTYCSIYWLADMIKEIVDSPDLKENEDETKI
Ga0181369_10563532	3300017708	Marine	MNKEEMIEEIQSLCKANKNNPYCSVYWLADMIKEIVDSSDLIEEEA
Ga0181403_11374942	3300017710	Seawater	MSKSEMIEGIETLIKANKDNDSCSVYWLADMIKEIVDSPDLKETEDEDV
Ga0181412_10117784	3300017714	Seawater	MNKTEMIENIETIIKANKDNDNCSVFWLADMIKEIVDSPDLKETEDEDV
Ga0181393_10802753	3300017748	Seawater	MIEEIQLLCKANKNNPDCSVYWLANMIKEIVDSSDLIEEEA
Ga0181392_10659812	3300017749	Seawater	MDKKEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDRIDLKEDNRT
Ga0181382_10657065	3300017756	Seawater	MDKKEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLKED
Ga0181408_10485994	3300017760	Seawater	TKMNKTEMIENIETIIKANKDNDNCSVFWLADMIKEIVDSPDLKETEDEDV
Ga0181607_100842748	3300017950	Salt Marsh	MNKEEMIAEIESLCNANKNNPYCSVYWLADMIMDIVDSADLKEIENEN
Ga0181595_103613403	3300020053	Salt Marsh	MIAEIESLCNANKNNPYCSVYWLADMIMDIVDSADLKEIENEN
Ga0211510_10216826	3300020336	Marine	MNKEEMIEEIELLCKANKNNADCSVYWLANMIKEIVDSPDLIEEEA
Ga0211510_10502691	3300020336	Marine	MNKEEMIEQIELLCKANKNNPDCSVYWLANMIKEIVDSSDLIE
Ga0211666_100291833	3300020392	Marine	MDKIEMINEIQSLCKANKDNPYCSIYWLADMIKEIVDSPDLIEEKINGV
Ga0211497_101348243	3300020394	Marine	MNKQEMINEIQSLCKANKDNPYCSVYWLANMIKEIVDSSDLTESNHE
Ga0211659_1000268524	3300020404	Marine	MSKKEMIEEIESLCKANKNNPYCSIYWLADMIKEIVDSPDLIEEVA
Ga0211659_100150359	3300020404	Marine	MSKKEMIEEIESLCKANKNNPYCSVYWLADMIKEIVDSPDLTEED
Ga0211659_103463182	3300020404	Marine	MNKSEMIAEIESLCKANKNNPYCSVYWLADMIKEVVDSTDLKENEDE
Ga0211512_1000020640	3300020419	Marine	MTKEEMIEEIQSLCKANKNNPYCSVYWLADMIKEIVDSSDLIEEDA
Ga0211512_1000043636	3300020419	Marine	MNKEEMIEEIQLLCKANKNNPDCSVYWLANMIKEIVDSPDLTEEEAK
Ga0211708_103709781	3300020436	Marine	MNKKEMIEEIESLCKANKNNPYCSVYWLADMIKEIVYSPDLIEEDEA
Ga0211558_104949151	3300020439	Marine	MDKIEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLKEDNRT
Ga0211559_102440181	3300020442	Marine	MINEIQSLCKANKDNPYCSIYWLADMIKEIVDSSDLIEEEINET
Ga0211559_102486654	3300020442	Marine	MDKKEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLKEDNRT
Ga0211547_102229254	3300020474	Marine	MDKQEMIDEIQSLCKVNKNNPYCSVYWLADMIKEIVDSTDLTEEEINEGL
Ga0222717_103087431	3300021957	Estuarine Water	MSKTEMIAEIKSLCNANENNPYCSIYWLADMIKEIVNSPDLKENEDEN
Ga0222717_107326033	3300021957	Estuarine Water	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKETEDE
Ga0212023_10218491	3300022061	Aqueous	MNKTEMIAEIRSLCNANENNPYCSIYWLADMIKEIVDSPDLKENEDETKI
Ga0224902_1010925	3300022066	Seawater	MTKEEMIKEIQSLCKANKNNPYCSVYWLADMIKEILDSSDLIEEEA
Ga0212028_10503692	3300022071	Aqueous	TKMNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKENEDED
Ga0212020_10492661	3300022167	Aqueous	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKETEDDS
Ga0209992_100075655	3300024344	Deep Subsurface	MSKSEMIAEIESLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDER
(restricted) Ga0255047_103282761	3300024520	Seawater	SINVGGGVMNKTEMIAEIRSLCNANENNPYCSIYWLADLIMDIVDSADLKEEVSS
Ga0207896_10587051	3300025071	Marine	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSGDLKEEVAND
Ga0208157_100627011	3300025086	Marine	MNKSEMIAEIESLCKANKNNPYCSIYWLADMIKEVVDSTDLEENEDEDV
Ga0208157_10289653	3300025086	Marine	MSKAEMIEKIRTLIIANKDNDNCSVYWLADMIREIIDSIDLQNGEVK
Ga0208159_10008122	3300025101	Marine	MSNKAMMIEEIEILIKANKDNPHCSVFWLADMIKQIVTDPDLTEEELSKK
Ga0208159_10292612	3300025101	Marine	MTNKAMMIEEIEILIKSNKDNPHCSVFWLADMIKKIVTDPDLTEEELSE
Ga0208793_10305083	3300025108	Marine	MSKSEMIEDIETLIKANKDNDNCSVYWLADMIKEIVDSPDLKENEDEYME
Ga0209348_10721944	3300025127	Marine	MSKKEMIEEIESLCKANKNNPYCSVYWLADMIKEIVDNPDLTEEDE
Ga0208299_10123925	3300025133	Marine	MSKSEMIEDIETLIKANKDNDNCSVYWLADMIKEIVDSPDLKENEDEPME
Ga0209634_12103383	3300025138	Marine	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDS
Ga0209645_100599113	3300025151	Marine	MDKKEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVD
Ga0209645_101912710	3300025151	Marine	MIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLKEDNRT
Ga0209645_10510551	3300025151	Marine	MIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSSDLIEEEV
Ga0208182_10763131	3300025251	Deep Ocean	MSKSEMIAEIKSLCNANKNNPYCSVYWLADMIKEVVDSPDLKENEDE
Ga0208029_10015165	3300025264	Deep Ocean	MDKKEMIEDIETLIKANKDNDNCSIYWLADMIKEIVDSSDLKEEVPHETI
Ga0208149_10603945	3300025610	Aqueous	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVN
Ga0208134_100354412	3300025652	Aqueous	MIAEIRSLCNANENNPYCSVYWLADMIKEIVDSPDLKETENDN
Ga0208428_10180947	3300025653	Aqueous	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKENEDE
Ga0208898_11728333	3300025671	Aqueous	MDKQEMIAEIRSLCNANENNPYCSVYWLADLIMDIVDSADLKEEVSND
Ga0208162_11532132	3300025674	Aqueous	MDKIEMIDEIQSLCKANKNNPYCSVYWLADMIKEIVDSIDLTEDNRT
Ga0209193_10600564	3300025816	Pelagic Marine	MNKAEMIAEIESLCNANKNNPYCSVYWLADMIKEIVNSPDLKETEDED
Ga0209035_100998743	3300027827	Marine	MSKEEMIENIENLIKANKDNDNCSVYWLADMIKEIVDSPDLKENEDE
Ga0256368_10148271	3300028125	Sea-Ice Brine	MDKTEMIKEIRSLCNANENNPYCSVYWLADMIMDIVDS
Ga0183748_11177982	3300029319	Marine	MDKIEMIDEIQSICKANKNNPYCSVYWLADMIKEIVDSIDLTEDNRT
Ga0183755_10456634	3300029448	Marine	MNKEEMIEEIELLCKANKNNADCSVYLLANMIKEIVDSSDLTEEEA

Hidden Markov Model


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