Metagenome / Metatranscriptome Family F095287

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095287
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	73 residues
Representative Sequence	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Number of Associated Samples	66
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.77 %
% of genes near scaffold ends (potentially truncated)	36.19 %
% of genes from short scaffolds (< 2000 bps)	67.62 %
Associated GOLD sequencing projects	54
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.048 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (51.429 % of family members)
Environment Ontology (ENVO)	Unclassified (46.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.24% β-sheet: 0.00% Coil/Unstructured: 37.76%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF11008	DUF2846	11.43
PF01252	Peptidase_A8	5.71
PF01479	S4	4.76
PF08264	Anticodon_1	3.81
PF14257	DUF4349	2.86
PF03069	FmdA_AmdA	2.86
PF00106	adh_short	0.95
PF07992	Pyr_redox_2	0.95
PF00291	PALP	0.95
PF00849	PseudoU_synth_2	0.95
PF13518	HTH_28	0.95
PF00232	Glyco_hydro_1	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0597	Lipoprotein signal peptidase	Cell wall/membrane/envelope biogenesis [M]	11.43
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	2.86
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.95
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.95
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.05 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.76 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	47.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.76 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.76 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.62 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.95 %
Unclassified	root	N/A	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	47.62 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.95 %
Unclassified	root	N/A	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10010724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3273	Open in IMG/M
3300002562\|JGI25382J37095_10168325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300002908\|JGI25382J43887_10123094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300002914\|JGI25617J43924_10004566	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300002914\|JGI25617J43924_10026219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2048	Open in IMG/M
3300002917\|JGI25616J43925_10402515	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005174\|Ga0066680_10041195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2672	Open in IMG/M
3300005174\|Ga0066680_10164418	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300005174\|Ga0066680_10225621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300005180\|Ga0066685_10087185	All Organisms → cellular organisms → Bacteria → Acidobacteria	2069	Open in IMG/M
3300005181\|Ga0066678_10407860	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300005181\|Ga0066678_10710374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300005554\|Ga0066661_10018018	All Organisms → cellular organisms → Bacteria	3697	Open in IMG/M
3300005586\|Ga0066691_10057755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2096	Open in IMG/M
3300006034\|Ga0066656_10049121	All Organisms → cellular organisms → Bacteria → Acidobacteria	2428	Open in IMG/M
3300006755\|Ga0079222_12095473	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300007255\|Ga0099791_10153923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300007255\|Ga0099791_10226241	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300007265\|Ga0099794_10025347	All Organisms → cellular organisms → Bacteria → Acidobacteria	2730	Open in IMG/M
3300009038\|Ga0099829_10026366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4078	Open in IMG/M
3300009038\|Ga0099829_11003084	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300009038\|Ga0099829_11085130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300009038\|Ga0099829_11421530	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	573	Open in IMG/M
3300009088\|Ga0099830_10265301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300009088\|Ga0099830_10295183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300009088\|Ga0099830_11229269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300009089\|Ga0099828_11104530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300009090\|Ga0099827_10580279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300009143\|Ga0099792_10496183	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300010133\|Ga0127459_1006450	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010364\|Ga0134066_10061449	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300011269\|Ga0137392_10342575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300011271\|Ga0137393_11096651	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012202\|Ga0137363_10117525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2046	Open in IMG/M
3300012202\|Ga0137363_10361958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1202	Open in IMG/M
3300012202\|Ga0137363_10499371	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300012202\|Ga0137363_10864964	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012202\|Ga0137363_11740863	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012203\|Ga0137399_10017638	All Organisms → cellular organisms → Bacteria	4569	Open in IMG/M
3300012203\|Ga0137399_10153207	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300012205\|Ga0137362_10039322	All Organisms → cellular organisms → Bacteria	3802	Open in IMG/M
3300012205\|Ga0137362_10237174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1574	Open in IMG/M
3300012205\|Ga0137362_10690507	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300012209\|Ga0137379_10095065	All Organisms → cellular organisms → Bacteria → Acidobacteria	2867	Open in IMG/M
3300012361\|Ga0137360_10063187	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300012361\|Ga0137360_10441837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1101	Open in IMG/M
3300012361\|Ga0137360_10454076	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300012361\|Ga0137360_10788035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300012363\|Ga0137390_10489692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300012683\|Ga0137398_10011444	All Organisms → cellular organisms → Bacteria	4508	Open in IMG/M
3300012683\|Ga0137398_10142604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300012685\|Ga0137397_10687642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300012924\|Ga0137413_10329363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300012925\|Ga0137419_10052515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2636	Open in IMG/M
3300012930\|Ga0137407_11256906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300015241\|Ga0137418_10082673	All Organisms → cellular organisms → Bacteria → Acidobacteria	2910	Open in IMG/M
3300020170\|Ga0179594_10036810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1594	Open in IMG/M
3300020199\|Ga0179592_10004359	All Organisms → cellular organisms → Bacteria	5995	Open in IMG/M
3300020199\|Ga0179592_10008601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4393	Open in IMG/M
3300020199\|Ga0179592_10054221	All Organisms → cellular organisms → Bacteria → Acidobacteria	1824	Open in IMG/M
3300020199\|Ga0179592_10149022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300020199\|Ga0179592_10384294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300020579\|Ga0210407_10015604	All Organisms → cellular organisms → Bacteria	5640	Open in IMG/M
3300020581\|Ga0210399_10052953	All Organisms → cellular organisms → Bacteria → Acidobacteria	3263	Open in IMG/M
3300021178\|Ga0210408_10264324	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1371	Open in IMG/M
3300026296\|Ga0209235_1022609	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300026298\|Ga0209236_1001946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12589	Open in IMG/M
3300026298\|Ga0209236_1216562	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026304\|Ga0209240_1070058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1306	Open in IMG/M
3300026309\|Ga0209055_1141370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300026313\|Ga0209761_1069718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1870	Open in IMG/M
3300026320\|Ga0209131_1307617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300026334\|Ga0209377_1336836	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026532\|Ga0209160_1353965	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026536\|Ga0209058_1053502	All Organisms → cellular organisms → Bacteria → Acidobacteria	2281	Open in IMG/M
3300026551\|Ga0209648_10000376	All Organisms → cellular organisms → Bacteria	33746	Open in IMG/M
3300026551\|Ga0209648_10019586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5913	Open in IMG/M
3300026551\|Ga0209648_10025185	All Organisms → cellular organisms → Bacteria	5200	Open in IMG/M
3300026551\|Ga0209648_10114182	All Organisms → cellular organisms → Bacteria	2191	Open in IMG/M
3300026551\|Ga0209648_10142499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1904	Open in IMG/M
3300026551\|Ga0209648_10200756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1522	Open in IMG/M
3300026551\|Ga0209648_10573194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300026555\|Ga0179593_1095676	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300026557\|Ga0179587_10013668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4261	Open in IMG/M
3300027663\|Ga0208990_1105870	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300027671\|Ga0209588_1031990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1684	Open in IMG/M
3300027671\|Ga0209588_1066116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300027846\|Ga0209180_10021969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3384	Open in IMG/M
3300027862\|Ga0209701_10241483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300027862\|Ga0209701_10361272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300027903\|Ga0209488_10281416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300027903\|Ga0209488_10716892	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300030974\|Ga0075371_11381776	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031057\|Ga0170834_105709489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300031708\|Ga0310686_110534849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300031753\|Ga0307477_10482846	All Organisms → cellular organisms → Bacteria → Acidobacteria	844	Open in IMG/M
3300031754\|Ga0307475_10377161	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300031754\|Ga0307475_11070403	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300031820\|Ga0307473_10089412	All Organisms → cellular organisms → Bacteria	1605	Open in IMG/M
3300031962\|Ga0307479_10188187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2032	Open in IMG/M
3300031962\|Ga0307479_10973855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300031962\|Ga0307479_11141657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300032180\|Ga0307471_102812378	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300032205\|Ga0307472_100238388	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.05%
Loam	Environmental → Terrestrial → Soil → Loam	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	54.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	51.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100107242	3300002558	Grasslands Soil	MRDPQGLDPYLQKEAQAMIKPNVGLANMSIERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
JGI25382J37095_101683251	3300002562	Grasslands Soil	MRDPQGLDPYLQKEAQAMIKPNVGLANMSIERVLELSADAHIQRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQW
JGI25382J43887_101230942	3300002908	Grasslands Soil	MIKPNVGLANMSIERVLELSADAHIQRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
JGI25617J43924_100045664	3300002914	Grasslands Soil	MMKTNSDFANKGIERILELSADAHIRRQGTIMGSPEFHKLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
JGI25617J43924_100262193	3300002914	Grasslands Soil	MMKPNVGLANMSIDRVLELSADAHIRRRGTIKDSAEFHKLTGVIAAYGKVLALLTGLQQWEEFRANGRAA*
JGI25616J43925_104025151	3300002917	Grasslands Soil	MMKSNVGLANMSIERILELSADAHIQRRGTIKGSPEFHKLTGAIAAYGKALALLTALQQWEELRGSGRAA*
Ga0066680_100411951	3300005174	Soil	MRDPQGLDPYLQKEAQAMIKPNVGLANMSIERVLELSADAHIQRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0066680_101644182	3300005174	Soil	MMKASSGLANMSIERVLELSADAHIRRRGTIKDSPEFHKLTGVIAAYGRVLELLTTLQQWDEIRAKGRAA*
Ga0066680_102256212	3300005174	Soil	MMRVNLGLANKGIERILELSADAQIRRRGTAENSPEFHALTGAIAAYGKALALLIALQRLEKLRNRWSAGRARYIAA*
Ga0066685_100871852	3300005180	Soil	MIKPNVGLANMGIERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0066678_104078602	3300005181	Soil	MMRATSGLMNEAIEQVVELSADAHIQRRMTVKGSPEFHKLTGAIAAYGKTLAVLTEL
Ga0066678_107103741	3300005181	Soil	MIRVNLGLANKGIERILELSADAQIRRRGTAENSPEFHALTGAIAAYGKALALLIALQRLEKLRNRWSAG
Ga0066661_100180183	3300005554	Soil	MQSPEGLAPLLPKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEALRGNDRAA*
Ga0066691_100577553	3300005586	Soil	MMRVNLGLANKGIERILELSADAQIRRRGTARNSPEFHALTGAIAAYGKALALFIALQRLEKLRNRWSAGR
Ga0066656_100491211	3300006034	Soil	IERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0079222_120954732	3300006755	Agricultural Soil	MMKPYAGVANEGIERILEFSADAHIRRRETEKDSPEYYSLTGAIAAYGKTLALLTALQEQEE
Ga0099791_101539233	3300007255	Vadose Zone Soil	LANRGIERILELSADAHIRRRGTIKGSPEFHNLTGAIVAYGRTLALLTGLQQWEALRGNDRAA*
Ga0099791_102262411	3300007255	Vadose Zone Soil	LLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTMKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA*
Ga0099794_100253472	3300007265	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTMKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA*
Ga0099829_100263664	3300009038	Vadose Zone Soil	MQSPEGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0099829_110030841	3300009038	Vadose Zone Soil	PLLQKEAQPMMKPNVGLANMSIDRVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0099829_110851301	3300009038	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERA
Ga0099829_114215301	3300009038	Vadose Zone Soil	QKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0099830_102653012	3300009088	Vadose Zone Soil	MMKPNVGLANMSIDRVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0099830_102951833	3300009088	Vadose Zone Soil	LLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0099830_112292691	3300009088	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0099828_111045302	3300009089	Vadose Zone Soil	MVKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHSLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0099827_105802792	3300009090	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEGFRGNDRAA*
Ga0099792_104961831	3300009143	Vadose Zone Soil	GLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQLEELRGNERAA*
Ga0127459_10064501	3300010133	Grasslands Soil	KPNVGLANMGIERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0134066_100614492	3300010364	Grasslands Soil	MMRATSGLMNEAVEQVLELSADAHIQRRMTVKGSPEFHNLTGAIAAYGRTLAVLTELQ
Ga0137392_103425752	3300011269	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0137393_110966511	3300011271	Vadose Zone Soil	GIKRILELSADAHIRRRGTIKGSPEFQNLTGAIAAYGRTLALLAGLQQWEEFRGNERAA*
Ga0137363_101175252	3300012202	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIVAYGRTLALLTGLQQWEALRGNDRAA*
Ga0137363_103619581	3300012202	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQW
Ga0137363_104993711	3300012202	Vadose Zone Soil	IDRVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA*
Ga0137363_108649642	3300012202	Vadose Zone Soil	PLLQKEVKPMMKTNSELANQGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA*
Ga0137363_117408631	3300012202	Vadose Zone Soil	PLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQLEELRGNERAA*
Ga0137399_100176382	3300012203	Vadose Zone Soil	MLKTNSDFENKGIERILELSADAHIRRRGTIVGSPEFHNLTGAIAAYGRTLTLLTGLQQWEGFRGNDQAA*
Ga0137399_101532073	3300012203	Vadose Zone Soil	MMKANLGLANKGIERILELSADAHVRRRGTVKDSPEFHNLTGAIAAYGNALALLTGLQQWEALRGNDRAA
Ga0137362_100393224	3300012205	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA*
Ga0137362_102371742	3300012205	Vadose Zone Soil	MQSPKGLTPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA*
Ga0137362_106905071	3300012205	Vadose Zone Soil	QIGGFPLSRSPEGLAPLLQKEGQVMLKTNSDFENKGIERILELSADAHIRRRGTIVGSPEFHNLTGAIAAYGRTLTLLTGLQQWEGFRGNDRAA*
Ga0137379_100950652	3300012209	Vadose Zone Soil	MVKTHSDLANKSIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEAFRGNDRAA*
Ga0137360_100631873	3300012361	Vadose Zone Soil	MQSPEGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQLEELRGNERAA*
Ga0137360_104418371	3300012361	Vadose Zone Soil	MLKTNSDLANKGIERILELSADAHIQRRGTIKGSPEFHSLTGAIAAYGRTLAVLTGLQQWEAFRGNDRAA*
Ga0137360_104540762	3300012361	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQWEE
Ga0137360_107880352	3300012361	Vadose Zone Soil	MQSPKGLTPLLQKEVKPMMKTNSELANQGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA*
Ga0137390_104896922	3300012363	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWQELRGNERAA*
Ga0137398_100114444	3300012683	Vadose Zone Soil	MLKTNSDFENKGIERILELSADAHIRRRGTIVGSPEFHNLTGAIAAYGRTLTLLTGLQQWEGFRGNDRAA*
Ga0137398_101426043	3300012683	Vadose Zone Soil	LLQKEVKPMMKTNSEIANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA*
Ga0137397_105422771	3300012685	Vadose Zone Soil	QKEAQPMMKANLGLANKGIQRVLELSADVHIRRRETVKDSPEFHNLTGAIAAYGQALSFLTVL*
Ga0137397_106876423	3300012685	Vadose Zone Soil	NKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIVAYGRTLALLTGLQQWEALRGNDRAA*
Ga0137413_103293633	3300012924	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSEIANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA*
Ga0137419_100525153	3300012925	Vadose Zone Soil	LLQKEVKPMMKTNSELANQGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA*
Ga0137407_112569062	3300012930	Vadose Zone Soil	NKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA*
Ga0137418_100826732	3300015241	Vadose Zone Soil	NQGIERILELSAVAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA*
Ga0179594_100368103	3300020170	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSEIANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA
Ga0179592_100043593	3300020199	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTMKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA
Ga0179592_100086013	3300020199	Vadose Zone Soil	MQSPKGLTPLLQKEVKPMMKTNSELANQGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA
Ga0179592_100542212	3300020199	Vadose Zone Soil	MLKTNSDFENKGIERILELSADAHIRRRGTIVGSPEFHNLTGAIAAYGRTLTLLTGLQQWEGFRGNDRAA
Ga0179592_101490222	3300020199	Vadose Zone Soil	MMKTSSDLANKGIKRILELSADAHIRRRGTIKGSPEFQNLTGAIAAYGRTLALLTGLQQWEEFRGNERAA
Ga0179592_103842942	3300020199	Vadose Zone Soil	LLQKEVKPMMKTNSEIANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA
Ga0210407_100156045	3300020579	Soil	MMKTSSDLANKGIERILELSADAPIRRRGTIKGSPEFQNLTRAIAAYGRTLALLTGLQQWEEFRGNERAA
Ga0210399_100529532	3300020581	Soil	MMKTSSDLANKGIERILELSADAHIRRRGTIKGSPEFQNLTRAIAAYGRTLALLTGLQQWEEFRGNERAA
Ga0210408_102643241	3300021178	Soil	MMKTSSDLANRGIERILELSADAHIRRRGTIKGSSEYQNLTGAIAAYGRTLALLTGLQHWEEFRGNERAA
Ga0209235_10226093	3300026296	Grasslands Soil	MRDPQGLDPYLQKEAQAMIKPNVGLANMSIERVLELSADAHIQRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209236_10019462	3300026298	Grasslands Soil	MIKPNVGLANMSIERVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209236_12165621	3300026298	Grasslands Soil	MMMRANAGLANKMIERILELSADAHIRRRGTIKDSPEFNKLTGAIAAYGKTLALLTALQR
Ga0209240_10700582	3300026304	Grasslands Soil	MMKTNSDFANKGIERILELSADAHIRRQGTIMGSPEFHKLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Ga0209055_11413701	3300026309	Soil	NKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEALRGNDRA
Ga0209761_10697181	3300026313	Grasslands Soil	MRNRRGLHPLLQKEAEPMMKPNSGLANKVIERILELSADAHIQRRGTAKDSPAFHKLTGAIAAYGKALALLAALQRR
Ga0209131_13076172	3300026320	Grasslands Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIVAYGRTLALLTGLQQW
Ga0209377_13368361	3300026334	Soil	MRNRRGLHPLLQKEAEPMMKPNSGLANKVIERILELSADAHIQRRGTAKDSPAFHKLTGAIAA
Ga0209160_13539651	3300026532	Soil	MRDPQGLDPYLQKEAQAMIKPNVGLANMSIERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209058_10535021	3300026536	Soil	MIKPNVGLANMGIERILELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209648_100003767	3300026551	Grasslands Soil	MMKPNVGLANMSIDRVLELSADAHIRRRGTIKDSAEFHKLTGVIAAYGKVLALLTGLQQWEEFRANGRAA
Ga0209648_100195865	3300026551	Grasslands Soil	MMKANEGLANKGIERILELSADAHVRRRRTAKDSPEFHHLSGAIAAYGKTLALLTGLQQWEELCANHRAA
Ga0209648_100251853	3300026551	Grasslands Soil	MVKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Ga0209648_101141822	3300026551	Grasslands Soil	MMKVSEGLANKGIERVLELSADAQIRRRGTVKDSPQFHKLTGAIAAYGKALALLIGLQRLEKLRNERAA
Ga0209648_101424993	3300026551	Grasslands Soil	MMKPNVGLANMSIDRVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209648_102007561	3300026551	Grasslands Soil	MQSPEGLAPLSQKEVKPMMKTNSELANKGIERILELSADAHIRRRRTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRG
Ga0209648_105731941	3300026551	Grasslands Soil	MMKTSSDIANKGIERILELSADAHIRRRGTINGSPEYQNLTGAIAAYGRTLALLTGLQQWEE
Ga0179593_10956763	3300026555	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSETANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA
Ga0179587_100136681	3300026557	Vadose Zone Soil	MQSPKGLTPLLQKEVKPMMKTNSELANEGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNGRAA
Ga0208990_11058701	3300027663	Forest Soil	MAPLLQKEGQVMLKTNSDFENKGIERILELSADAHIRRRGTIVGSPEFHNLTGAIAAYGRTLTLLTGLQQWEAFRGNDRAA
Ga0209588_10319903	3300027671	Vadose Zone Soil	MMKPNVGLANMSIDRVLELSADAHIRRRGTVKDSPEFHKLTGAIVAYGRMLALLTALQQWEEFRANGRAA
Ga0209588_10661161	3300027671	Vadose Zone Soil	SPIQSPEGWAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTMKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERAA
Ga0209180_100219693	3300027846	Vadose Zone Soil	MQSPKGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Ga0209701_102414831	3300027862	Vadose Zone Soil	MDPLLQKEAQPMMKPNVGLANMSIDRVLELSADAHIRRRGTVKDSPEFHKLTGAIAAYGRMLALLTALQQWEEFRANGRAA
Ga0209701_103612722	3300027862	Vadose Zone Soil	MMKTNSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Ga0209488_102814164	3300027903	Vadose Zone Soil	MQSPEGLAPLLQKEVKPMMKTNSELANKGIERILELSADAHIRRRGTSKGSPEFHNLTGAIAAYGRTLALLTGLQQLEELRGNERAA
Ga0209488_107168922	3300027903	Vadose Zone Soil	NKGIERILELWADAHIRRRGTMKGSPEFHNLTGAIAAYGRTLALLTGLQQWEQLRGNERA
Ga0075371_113817761	3300030974	Soil	MMKPNVGLANMSIERVLELSADAHIRRRGTIKDSPEFHKLSGAIAAYGRILALLTGLQQWEELRANGRAA
Ga0170834_1057094891	3300031057	Forest Soil	KPNVGLANMSIERVLELSADAHIRRRGTIKDSPEFHKLSGAIAAYGRILALLTGLQQWEELRANGRAA
Ga0310686_1105348491	3300031708	Soil	MIKANLGLANKGIERILELSADAHIRRRGTVKDSPEFHNLTGAIAAYGKALELLTALQQLEEF
Ga0307477_104828462	3300031753	Hardwood Forest Soil	MMKPNVRLANLTIERILELSADAHIRRRQTVQGSAEFHKLTGAIAAYGKALALLTALRRWEELRASDRAA
Ga0307475_103771612	3300031754	Hardwood Forest Soil	MIKPDVSVVEKGIERILELSAVAHARRRGTIRESPEFHNLTGAIAAYGRTLALLTGLQQWEELRGNERAA
Ga0307475_110704031	3300031754	Hardwood Forest Soil	MIKTDSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEGFRGNDRAA
Ga0307473_100894121	3300031820	Hardwood Forest Soil	MMKPNAGLANMSIERIVELSADAHIRRRGTVKGSPEFHKLTGVIAAYGKALALLTALKQWEELRTNDRAA
Ga0307479_101881872	3300031962	Hardwood Forest Soil	MHSPEGLAPLLQKEVKPMIKTDSELANKGIERILELSADAHIRRRGTIKGSPEFHNLTGAIAAYGRTLALLTGLQQWEGFRGNDRAA
Ga0307479_109738551	3300031962	Hardwood Forest Soil	MQSPEGLAPLLQNEVKPMIKTNSELANKGIERILELSADAHIRRRGTIQGSPEFHNLTGAIAAYGRTLALLTGLQQWEGFRGN
Ga0307479_111416571	3300031962	Hardwood Forest Soil	MQSPEGLAPLLWKEVKPMMKTNSELANKGIERILELSADAHIRRRGTIKDSPEFHSLTGAIAAYGRTLALLTGLQQCEEFRGNDRAA
Ga0307471_1028123781	3300032180	Hardwood Forest Soil	MMKANLGLASKGIERILELSADAHIRRRLTVKDSPEFHNLTGAIAAYGKTLALLTALQELEEF
Ga0307472_1002383881	3300032205	Hardwood Forest Soil	MMKPNAGLANMSIERIVELSADAHIRRRGTVKGSPEFYKLTGVIAAYGKALALLTALKQWEELRTNDRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095287

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences