Metagenome Family F095276

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095276
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	52 residues
Representative Sequence	VTTYIAGAVLAGTALLMSQVTLEWAAATITGTLSLACLSAYLLMKVDMTS
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.95 %
% of genes near scaffold ends (potentially truncated)	98.10 %
% of genes from short scaffolds (< 2000 bps)	94.29 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.190 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.905 % of family members)
Environment Ontology (ENVO)	Unclassified (37.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.97% β-sheet: 0.00% Coil/Unstructured: 41.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13450	NAD_binding_8	75.24
PF01593	Amino_oxidase	18.10
PF02954	HTH_8	4.76
PF00953	Glycos_transf_4	0.95
PF00593	TonB_dep_Rec	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0472	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.19 %
Unclassified	root	N/A	3.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.00 %
Unclassified	root	N/A	3.81 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	34.29 %
Unclassified	root	N/A	3.81 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.29 %
Unclassified	root	N/A	3.81 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.29 %
Unclassified	root	N/A	3.81 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.29 %
Unclassified	root	N/A	3.81 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.29 %
Unclassified	root	N/A	3.81 %
Nitrospira defluvii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_108692056	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300002124\|C687J26631_10331442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300002562\|JGI25382J37095_10209250	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300004480\|Ga0062592_100818307	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300004633\|Ga0066395_10924181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005166\|Ga0066674_10068647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1621	Open in IMG/M
3300005172\|Ga0066683_10728809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005175\|Ga0066673_10689050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005178\|Ga0066688_10598248	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005180\|Ga0066685_10016168	All Organisms → cellular organisms → Bacteria	4355	Open in IMG/M
3300005354\|Ga0070675_101780259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300005364\|Ga0070673_100937950	All Organisms → cellular organisms → Bacteria → Acidobacteria	804	Open in IMG/M
3300005437\|Ga0070710_10401883	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300005446\|Ga0066686_10077208	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300005446\|Ga0066686_10130128	All Organisms → cellular organisms → Bacteria → Acidobacteria	1649	Open in IMG/M
3300005447\|Ga0066689_10098354	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300005451\|Ga0066681_10453395	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300005451\|Ga0066681_10551463	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300005556\|Ga0066707_10137265	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300005559\|Ga0066700_10291513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300005586\|Ga0066691_10935994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300005615\|Ga0070702_101778669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005719\|Ga0068861_100971342	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300005764\|Ga0066903_100842980	Not Available	1648	Open in IMG/M
3300005764\|Ga0066903_108191274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006034\|Ga0066656_10096209	All Organisms → cellular organisms → Bacteria	1791	Open in IMG/M
3300006791\|Ga0066653_10146612	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300006794\|Ga0066658_10671035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006796\|Ga0066665_10122414	All Organisms → cellular organisms → Bacteria	1940	Open in IMG/M
3300006797\|Ga0066659_11686622	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300006844\|Ga0075428_102570673	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300006845\|Ga0075421_101130049	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300006845\|Ga0075421_102414190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300006846\|Ga0075430_101598583	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii	535	Open in IMG/M
3300006847\|Ga0075431_100646756	Not Available	1038	Open in IMG/M
3300006854\|Ga0075425_103175306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300006871\|Ga0075434_100846627	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300006880\|Ga0075429_101215657	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300006904\|Ga0075424_101066599	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300006904\|Ga0075424_101883867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300006914\|Ga0075436_100411696	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300006914\|Ga0075436_101138062	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009012\|Ga0066710_100763180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300009137\|Ga0066709_100417279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1867	Open in IMG/M
3300009137\|Ga0066709_102312227	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300009147\|Ga0114129_12381085	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300009162\|Ga0075423_10281046	All Organisms → cellular organisms → Bacteria → Acidobacteria	1744	Open in IMG/M
3300009678\|Ga0105252_10068484	Not Available	1376	Open in IMG/M
3300010043\|Ga0126380_10055600	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300010046\|Ga0126384_10696493	All Organisms → cellular organisms → Bacteria → Acidobacteria	900	Open in IMG/M
3300010046\|Ga0126384_11675388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010047\|Ga0126382_12400511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010048\|Ga0126373_11363884	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300010304\|Ga0134088_10098309	All Organisms → cellular organisms → Bacteria → Acidobacteria	1376	Open in IMG/M
3300010325\|Ga0134064_10502821	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300010358\|Ga0126370_11354511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300010359\|Ga0126376_10624009	All Organisms → cellular organisms → Bacteria → Acidobacteria	1024	Open in IMG/M
3300010361\|Ga0126378_10745780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300010375\|Ga0105239_13426726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300010376\|Ga0126381_103112356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300010398\|Ga0126383_11817419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300011417\|Ga0137326_1002971	All Organisms → cellular organisms → Bacteria	4443	Open in IMG/M
3300012173\|Ga0137327_1037322	Not Available	1049	Open in IMG/M
3300012198\|Ga0137364_10258307	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300012203\|Ga0137399_10960879	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300012206\|Ga0137380_10358659	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300012210\|Ga0137378_11317834	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300012211\|Ga0137377_11348992	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300012212\|Ga0150985_112136092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300012363\|Ga0137390_11491025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012893\|Ga0157284_10223688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012917\|Ga0137395_10844083	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	663	Open in IMG/M
3300014154\|Ga0134075_10085748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300014154\|Ga0134075_10345273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300014154\|Ga0134075_10404537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300014878\|Ga0180065_1122723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300015242\|Ga0137412_10287273	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300015358\|Ga0134089_10170849	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300015358\|Ga0134089_10368314	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300015359\|Ga0134085_10053343	All Organisms → cellular organisms → Bacteria → Acidobacteria	1621	Open in IMG/M
3300015371\|Ga0132258_13794969	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300016357\|Ga0182032_11165141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300016387\|Ga0182040_11422525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300017656\|Ga0134112_10477467	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300017657\|Ga0134074_1201356	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300017659\|Ga0134083_10318083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300018431\|Ga0066655_10220278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300020581\|Ga0210399_11091805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300021476\|Ga0187846_10386683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300024232\|Ga0247664_1116280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300025898\|Ga0207692_10344045	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300025922\|Ga0207646_11211666	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300026035\|Ga0207703_10073800	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300026121\|Ga0207683_10533962	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300026297\|Ga0209237_1291593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300026342\|Ga0209057_1106850	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300026528\|Ga0209378_1073436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1566	Open in IMG/M
3300026537\|Ga0209157_1057654	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300026538\|Ga0209056_10132774	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300026538\|Ga0209056_10138417	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300027573\|Ga0208454_1112488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027873\|Ga0209814_10323711	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300031716\|Ga0310813_11439684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300031954\|Ga0306926_12197215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300034147\|Ga0364925_0135952	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.10%
Host-Associated	Host-Associated	21.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Plants	Host-Associated → Plants	21.90%
Aquatic	Environmental → Aquatic	4.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.14%
Sediment	Environmental → Aquatic → Sediment	4.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Cave	Environmental → Terrestrial → Cave	0.95%
Floodplain	Environmental → Terrestrial → Floodplain	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.24%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.95%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.90%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.95%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.95%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002124	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011417	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1086920562	3300000955	Soil	LSVRETAVTTYIIGVLLSGVALLMSQVTLAWAAGTMFGALSAACLSAYLLLKVDMRP*
C687J26631_103314422	3300002124	Soil	ETAVTTYIIGALLAGAALLISQIPLVWAVATMTGALSLACLSAYLLMKVDMRS*
JGI25382J37095_102092502	3300002562	Grasslands Soil	TTYVVGAILAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP*
Ga0062592_1008183071	3300004480	Soil	LLSGVGLLLSQVTLMWAIATMCGTLCFGCLSAYLLMKVDMHS*
Ga0066395_109241811	3300004633	Tropical Forest Soil	TAYIVGALLSGAALLMSQVTLEWAFATMFGTVSACCLSAYLLMKVDMRS*
Ga0066674_100686471	3300005166	Soil	LRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP*
Ga0066683_107288092	3300005172	Soil	KLSVRETAVTAYIVGAILAGTALLMSQVALEWAFLTIGGTLSGACLSAYLLMKVDMMS*
Ga0066673_106890502	3300005175	Soil	LLSGIALLISQVPLHLAVATMGGTLSAMCLTAYLLMKVDMGR*
Ga0066688_105982481	3300005178	Soil	LRRCSLSVRETAVTTYIVAVLLSGAALLMSHVALEWAVATMGGMLSLACLSAYLLMKVDMRS*
Ga0066685_100161684	3300005180	Soil	AGTALLMSQVTLEWAAATITGTLSLACLSAYLLMKVDMTS*
Ga0070675_1017802592	3300005354	Miscanthus Rhizosphere	RRMKLSVRETAVTAYILGALLSGVGLLLSQVTLMWAIATMCGTLCFGCLSAYLLMKVDMHS*
Ga0070673_1009379502	3300005364	Switchgrass Rhizosphere	LRLKLSVRETAVTAYIIAALLSGVALLLSQVTFAWAIATVFGALSAAGLSAYLLMKVDMQS*
Ga0070710_104018831	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	KLSVRETAITTYIIGVILSGAALLMSHVTLEWAVATMCGTVSMACLSAYLLMKVDMRS*
Ga0066686_100772083	3300005446	Soil	TYVVAALLGGVALLMSQVTLAWAAATIVGTLLAGVLSAYLLLKVDMRS*
Ga0066686_101301281	3300005446	Soil	ETAVTTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0066689_100983541	3300005447	Soil	LRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0066681_104533951	3300005451	Soil	SVRETAITTYIVGALLSGTALLISHVSLEWAVATMCGTLSAACLLAYLLLKVDMQS*
Ga0066681_105514631	3300005451	Soil	FALRLRRCKLSVRETAVTAYIAGAILAGTALLMSQVDIQWAVVTMGGTLTVACLSAYLLMKVDMMS*
Ga0066707_101372651	3300005556	Soil	VTTYIAGAVLAGTALLMSQVTLEWAAATITGTLSLACLSAYLLMKVDMTS*
Ga0066700_102915132	3300005559	Soil	SVRETAVTTYIVAVLLSGAALLMSHIALEWAVATMGGMLSLGCLSAYLLMKVDMRS*
Ga0066691_109359941	3300005586	Soil	TTYIVGVLLSVSALLMSNVTLEWAVATMCGTLSVACLSAYLLMKVDMRS*
Ga0070702_1017786692	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GGALLGGVALLMSQVQLEWAMATFAGTISALCLSAYLLMKVDMHS*
Ga0068861_1009713421	3300005719	Switchgrass Rhizosphere	IAALLSGVALLLSQITIAWAIATVCGALSVAGLSAYLLMKVDMQS*
Ga0066903_1008429801	3300005764	Tropical Forest Soil	TAVTTYIVGALLSGAALLMSQVTLGWAFATMFGTVSFACLSAYLLMKVDMRS*
Ga0066903_1081912741	3300005764	Tropical Forest Soil	TAITTYIVGALLSGAALLMSQVTLGWAFATMFGTVSAFCLSAYLLLKVDMRS*
Ga0066656_100962091	3300006034	Soil	MSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP*
Ga0066653_101466122	3300006791	Soil	YIAGAVLAGTALLMSQVTLEWAAATVTGALSLACLSAYLLMKVDMTP*
Ga0066658_106710352	3300006794	Soil	VLLSGVALLMSSVTLEWAVATMGGTLSALGLSAYLLMKVDMHS*
Ga0066665_101224141	3300006796	Soil	RLRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0066659_116866221	3300006797	Soil	AILAGTALLMSQVTLEWAAATVTGTLTLACLSAYLLLKVDMTP*
Ga0075428_1025706731	3300006844	Populus Rhizosphere	TAVTTYIIGILLSGVGLLMSQVTLAWAAGTMFGALSAACLSAYLLLKVDMRP*
Ga0075421_1011300491	3300006845	Populus Rhizosphere	GALIVSQIPLEWAVATMGGMLSLAGLSAYLLMKVDMHS*
Ga0075421_1024141901	3300006845	Populus Rhizosphere	TAVTTYIIGILLSGIGLLLSQVTLMWAIATMAGTISAACLSAYLLMKVDMHS*
Ga0075430_1015985832	3300006846	Populus Rhizosphere	ALRLRRCQLSVRETAVTAYIIGALLGGVALLMSQVRLEWAVGTLAGTVTAAWLSAYLLMKVDMTS*
Ga0075431_1006467562	3300006847	Populus Rhizosphere	GALLGGVALLMSQVRLEWAVGTLAGTVSAAGLSAYLLMKVDMTS*
Ga0075425_1031753061	3300006854	Populus Rhizosphere	YIVAVLLSGAALLMSHVALEWAVATMGGMLSLACLTAYLLMKVDMRS*
Ga0075434_1008466272	3300006871	Populus Rhizosphere	ALLMTQVTLEWAVATMCGTVSAACVSAYLLMKVDMRG*
Ga0075429_1012156572	3300006880	Populus Rhizosphere	SVRETAVTTYIIGALLSGVALLMSQVTLAWAAGTMFGALSAACLSAYLLLKVDMRP*
Ga0075424_1010665991	3300006904	Populus Rhizosphere	KLSVRETAVTAYILGVLLSGVALLLSQVTLMWAVATMCGIVCFGCLSAYLLMKVDMHS*
Ga0075424_1018838672	3300006904	Populus Rhizosphere	AVTTYVIGALLSGIALLMSQVTLAWAAATMFGAISAGCLSAYLLLKVDMHS*
Ga0075436_1004116961	3300006914	Populus Rhizosphere	SVRETAVTTYIIGVLLSGVALLMSQVTLAWAAGTMFGALSAACLSAYLLLKVDMRP*
Ga0075436_1011380622	3300006914	Populus Rhizosphere	ALRLRRCSLSVRETAVTTYIVAVLLSGAALLMSHIALEWAVATMGGMLSLACLTAYLLMKVDMRS*
Ga0066710_1007631801	3300009012	Grasslands Soil	ETAVTTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS
Ga0066709_1004172793	3300009137	Grasslands Soil	ISQIALEWAVATMTGMLSLAGLSAYLLMKVDMRP*
Ga0066709_1023122271	3300009137	Grasslands Soil	MSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0114129_123810851	3300009147	Populus Rhizosphere	LRRCQLSVRETAVTAYIIGALLGGVALLMSQVRLEWAVGTLAGTVSAAGLSAYLLMKVDMTS*
Ga0075423_102810461	3300009162	Populus Rhizosphere	ALLLSQVTLMWAVATMCGIVCFGCLSAYLLMKVDMHS*
Ga0105252_100684841	3300009678	Soil	ITAYIVGALLGGVALLMSQVRLEWAIGTLGGTVSAACLTAYLLMKVDMKA*
Ga0126380_100556003	3300010043	Tropical Forest Soil	RCKLSVRETAVTTYIVAALLSGAALLMSHVPLEWAVALLCGTLSMACLSAYLLMKVDMRS
Ga0126384_106964931	3300010046	Tropical Forest Soil	KLSVRETAVTTYIIGALLSGVALLMSQVTLAWAAGTMFGAISAACLSAYLLLKVDMRS*
Ga0126384_116753881	3300010046	Tropical Forest Soil	VGVLLGGVALLMSQVRLEWAIATMAGTLSAACLTAYLLMKVDMKS*
Ga0126382_124005112	3300010047	Tropical Forest Soil	MTTYIVGALLGGVALLMSQVQMAWAVGTLAGAMSAAFLSAYLLMKVDMKR*
Ga0126373_113638842	3300010048	Tropical Forest Soil	RETALTTYVVGILLSGVGLLMSQVTLEWAAATMCGTVSFACLSAYLLMKVDMRS*
Ga0134088_100983091	3300010304	Grasslands Soil	LAGTALLMSQVTLEWAAATITGTLSLACLSAYLLMKVDMTS*
Ga0134064_105028211	3300010325	Grasslands Soil	VLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0126370_113545112	3300010358	Tropical Forest Soil	RRCKLSVRETAVTAYIVAAILAGAALLMSQVALEWAILTIGGTLSAACLSAYLLMKVDMMS*
Ga0126376_106240091	3300010359	Tropical Forest Soil	LSVRETAVTTYIVAALLSGAALLMSNVPLEWAVATLCGTLSMACLSAYLLMKVDMRS*
Ga0126378_107457802	3300010361	Tropical Forest Soil	RETAITTYIAGVILSGAALLMSQLKLEWAVATMCGTLSMACLSAYLLMKVDMRS*
Ga0105239_134267262	3300010375	Corn Rhizosphere	FALRLRRMKLSVRETAVTAYILGALLSGVGLLLSQVTLMWAIATMCGTLCFGCLSAYLLMKVDMHS*
Ga0126381_1031123561	3300010376	Tropical Forest Soil	RLRRCKLSVRETAVTAYIVAAILAGAALLMSQVALEWAILTIGGTLSAACLSAYLLMKVDMMS*
Ga0126383_118174191	3300010398	Tropical Forest Soil	RCKLSVRETAITTYIVGALLSGAALLMSQVTLGWAFATMFGTVSAVCLSAYLLLKVDMRS
Ga0137326_10029715	3300011417	Soil	LKLSVRETAVTTYIVGALLSFVALLMTQVTIEWAAATMCGALSAACLSAYLLMKVDMRS*
Ga0137327_10373221	3300012173	Soil	VGALLGGVALLMSQVRLEWAIGTLGGTVSAACLTAYLLMKVDMKA*
Ga0137364_102583072	3300012198	Vadose Zone Soil	GAILAGTALLMSQVGLEWAVVTIGGTLSAACLSAYLLMKVDMMS*
Ga0137399_109608792	3300012203	Vadose Zone Soil	LLSGAALLMSHVALEWAVATMCGTLSLACLSAYLLMKVDMHS*
Ga0137380_103586591	3300012206	Vadose Zone Soil	TYVVGAVLAGTALLMSQVTLEWAAATITGALTLGCLSAYLLMKVDMTP*
Ga0137378_113178341	3300012210	Vadose Zone Soil	IAGAILAGTALLMSQVALEWAVVTIGGTLSVACLSAYLLMKVDMMS*
Ga0137377_113489921	3300012211	Vadose Zone Soil	LLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0150985_1121360922	3300012212	Avena Fatua Rhizosphere	AITAYIGGALLGGVALLMSQVQLEWAMATFAGTVSALCLSAFLLMKVDMHP*
Ga0137390_114910251	3300012363	Vadose Zone Soil	TYIVAVLLSGAALLMSHVALEWAVATMCGTVSAACLSAYLLMKVDMRS*
Ga0157284_102236881	3300012893	Soil	GALLGGVALLMSQVRLEWALATLAGTVSALCLSAYLLMKVDMRS*
Ga0137395_108440831	3300012917	Vadose Zone Soil	SLTVRETAVTTYIVAVLLSGAALLMSHVALEWAVATMCGTLSLACLSAYLLMKVDMHS*
Ga0134075_100857481	3300014154	Grasslands Soil	CSLSVRETAVTTYVVAALLGGVALLMSQVTLAWAAATIVGTLLAGVLSAYLLLKVDMRS*
Ga0134075_103452731	3300014154	Grasslands Soil	LLAGGALLISQIALGWAVATMTGMISLAGLSAYLLMKVDMRS*
Ga0134075_104045372	3300014154	Grasslands Soil	RLLSVRETAVTAYIIGALLSGIALLISQISLEWALATMGGTLSAACLSAYLLMKVDMRS*
Ga0180065_11227232	3300014878	Soil	LSVRETAVTTYIVGALLSFVALLMTQVTIEWAAATMCGALSAACLSAYLLMKVDMRS*
Ga0137412_102872731	3300015242	Vadose Zone Soil	SVRETAITAYVGGALLGGVALLMTQVQLEWAVATFAGTVSALCLSAYLLMKVDMRS*
Ga0134089_101708492	3300015358	Grasslands Soil	TTYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP*
Ga0134089_103683142	3300015358	Grasslands Soil	TTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS*
Ga0134085_100533431	3300015359	Grasslands Soil	RLRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP*
Ga0132258_137949692	3300015371	Arabidopsis Rhizosphere	RCRLSVRETAVTAYVVSALLGGVALLMSQVTIAWAAATMTGTVSAAVLSAYLLMKVDMRS
Ga0182032_111651411	3300016357	Soil	YVVGVLLGGAALLMSQVTLEWAAATMCGTLSFACLSAYLLMKVDMRS
Ga0182040_114225252	3300016387	Soil	YVVGILLGGAALLMSQVTLEWAAATMCGTLSFACLSAYLLMKVDMRS
Ga0134112_104774672	3300017656	Grasslands Soil	AGAALLMSQVTLEWAVATITGTLSVACLSAYLLMKVDMTS
Ga0134074_12013561	3300017657	Grasslands Soil	TYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP
Ga0134083_103180832	3300017659	Grasslands Soil	FALRLRRCKLSVRETAVTTYIIGVLLAGSALLISQIALEWAVATMTGMLSLAGLSAYLLMKVDMKS
Ga0066655_102202781	3300018431	Grasslands Soil	LLISQIALEWAVATMTGMLSLAGISAYLLMKVDMRP
Ga0210399_110918051	3300020581	Soil	IRETAVTAYIVGAILAGTALLMSQVGLEWAVMTIGGTLSAACLSAYLLMKVDMMS
Ga0187846_103866831	3300021476	Biofilm	ALLMSQVELAWAVATMGGTLSAACLSAYLLMKVDMMS
Ga0247664_11162802	3300024232	Soil	LRRLKLSVRETAVTTYILGVLLSTVALLMSQVTFEWAVITMGGTISFAGLSAYLLLKVDMRS
Ga0207692_103440451	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	KLSVRETAITTYIIGVILSGAALLMSHVTLEWAVATMCGTVSMACLSAYLLMKVDMRS
Ga0207646_112116661	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AILLSGVALLVSQVTLQWALATVGGALCAMCLSAYLLMKVDMTS
Ga0207703_100738004	3300026035	Switchgrass Rhizosphere	LSVRETAITAYIGGALLGGVALLMSQVQLEWAMATFAGTISALCLSAYLLMKVDMHS
Ga0207683_105339621	3300026121	Miscanthus Rhizosphere	TAITAYIGGALLGGVALLMSQVQLEWAMATFAGTLSALCLSAYLLMKVDMHS
Ga0209237_12915931	3300026297	Grasslands Soil	GAALVISQIPLVWAIATMTGTVSLACLSAYLLMKVDMRS
Ga0209057_11068501	3300026342	Soil	VRETAVTTYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP
Ga0209378_10734361	3300026528	Soil	VTTYIAGAVLAGTALLMSQVTLEWAAATITGTLSLACLSAYLLMKVDMTS
Ga0209157_10576541	3300026537	Soil	YVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS
Ga0209056_101327741	3300026538	Soil	LRLRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATITGALSLGCLSAYLLMKVDMTS
Ga0209056_101384171	3300026538	Soil	LRLRRCNLTVRETAVTTYVIGVVLAGTALLMSQVTLEWAAATVTGALTLACLSAYLLLKVDMTP
Ga0208454_11124882	3300027573	Soil	YIVGALLGGVALLMSQVRLEWAIGTLGGTVSAACLTAYLLMKVDMKA
Ga0209814_103237111	3300027873	Populus Rhizosphere	AVTTYIIGALLSGVALLMSQVTLAWAAGTMFGALSAACLSAYLLLKVDMRP
Ga0310813_114396842	3300031716	Soil	RMQLSVRDTAITTYIVGALLSFFGLLLSQVTLLWAVATMCGTVCFAGLSAYLLMKVDMHS
Ga0306926_121972152	3300031954	Soil	ILGALLSTVALLMSQVTLEWAVATMGGTICFACLSAYLLMKVDMRS
Ga0364925_0135952_3_173	3300034147	Sediment	SVRETAITTYIIGALLGVSALLMSSIRLEWAIVTMGGTMSLACLSAYLLMKVNMRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095276

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences