Metagenome Family F095275

Basic Information
Family ID	F095275
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	LDLTDAERAAFVARDMRRINELGGYLHLVMSVPGLAAH
Number of Associated Samples	100
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.05 %
% of genes from short scaffolds (< 2000 bps)	92.38 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (88.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (19.048 % of family members)
Environment Ontology (ENVO)	Unclassified (26.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.39% β-sheet: 0.00% Coil/Unstructured: 60.61%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01557	FAA_hydrolase	24.76
PF04519	Bactofilin	7.62
PF08530	PepX_C	6.67
PF13401	AAA_22	3.81
PF01979	Amidohydro_1	2.86
PF16901	DAO_C	2.86
PF03061	4HBT	2.86
PF00561	Abhydrolase_1	2.86
PF00480	ROK	1.90
PF02515	CoA_transf_3	1.90
PF07355	GRDB	1.90
PF07883	Cupin_2	1.90
PF03243	MerB	1.90
PF13565	HTH_32	1.90
PF04879	Molybdop_Fe4S4	1.90
PF02558	ApbA	0.95
PF03928	HbpS-like	0.95
PF08240	ADH_N	0.95
PF05036	SPOR	0.95
PF04909	Amidohydro_2	0.95
PF07969	Amidohydro_3	0.95
PF00180	Iso_dh	0.95
PF01048	PNP_UDP_1	0.95
PF11249	DUF3047	0.95
PF02900	LigB	0.95
PF09084	NMT1	0.95
PF13476	AAA_23	0.95
PF00571	CBS	0.95
PF01144	CoA_trans	0.95
PF00106	adh_short	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	7.62
COG2936	Predicted acyl esterase	General function prediction only [R]	6.67
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	3.81
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.90
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.95
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.95
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.95
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.95
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.95
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.95
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.95
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.57 %
Unclassified	root	N/A	11.43 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	48.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.33 %
Unclassified	root	N/A	11.43 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.95 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	48.57 %
Unclassified	root	N/A	11.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.95 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	48.57 %
Unclassified	root	N/A	11.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.90 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.95 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	28.57 %
Unclassified	root	N/A	11.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.95 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.95 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.57 %
Unclassified	root	N/A	11.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
unclassified Spirochaetaceae	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae	0.95 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.95 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	28.57 %
Unclassified	root	N/A	11.43 %
Spirochaetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	0.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004013\|Ga0055465_10312502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300004157\|Ga0062590_102299769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	567	Open in IMG/M
3300004463\|Ga0063356_105988963	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300005174\|Ga0066680_10536844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300005180\|Ga0066685_11083805	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005332\|Ga0066388_101780706	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1094	Open in IMG/M
3300005340\|Ga0070689_101468061	Not Available	617	Open in IMG/M
3300005353\|Ga0070669_101823216	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	531	Open in IMG/M
3300005444\|Ga0070694_100408523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1064	Open in IMG/M
3300005446\|Ga0066686_10673592	Not Available	701	Open in IMG/M
3300005446\|Ga0066686_11111219	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005454\|Ga0066687_10393546	Not Available	800	Open in IMG/M
3300005468\|Ga0070707_101001639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	801	Open in IMG/M
3300005535\|Ga0070684_100994536	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	787	Open in IMG/M
3300005540\|Ga0066697_10035556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2778	Open in IMG/M
3300005540\|Ga0066697_10098566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1701	Open in IMG/M
3300005553\|Ga0066695_10659927	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005555\|Ga0066692_10298952	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300005558\|Ga0066698_10182754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1429	Open in IMG/M
3300005568\|Ga0066703_10445119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300005587\|Ga0066654_10888038	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300005617\|Ga0068859_102529495	Not Available	565	Open in IMG/M
3300006791\|Ga0066653_10153158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1125	Open in IMG/M
3300006847\|Ga0075431_101512774	Not Available	630	Open in IMG/M
3300006904\|Ga0075424_100711327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1072	Open in IMG/M
3300006914\|Ga0075436_101514622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300007265\|Ga0099794_10646033	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009012\|Ga0066710_101741260	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300009147\|Ga0114129_10178235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2893	Open in IMG/M
3300009147\|Ga0114129_13285574	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	523	Open in IMG/M
3300009156\|Ga0111538_13391025	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300009162\|Ga0075423_12676823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	546	Open in IMG/M
3300009444\|Ga0114945_10534540	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009551\|Ga0105238_11341071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300009792\|Ga0126374_10883974	Not Available	691	Open in IMG/M
3300009819\|Ga0105087_1074651	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300009821\|Ga0105064_1037708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	915	Open in IMG/M
3300010046\|Ga0126384_10141765	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300010047\|Ga0126382_11516073	Not Available	617	Open in IMG/M
3300010329\|Ga0134111_10461789	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300010358\|Ga0126370_10336285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1214	Open in IMG/M
3300010358\|Ga0126370_10706337	Not Available	886	Open in IMG/M
3300010360\|Ga0126372_10085763	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2309	Open in IMG/M
3300010360\|Ga0126372_11220709	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300011270\|Ga0137391_10930656	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	710	Open in IMG/M
3300011428\|Ga0137456_1125709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	679	Open in IMG/M
3300012174\|Ga0137338_1131072	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012189\|Ga0137388_11364239	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300012199\|Ga0137383_10140493	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300012202\|Ga0137363_11730693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300012203\|Ga0137399_10266276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1409	Open in IMG/M
3300012209\|Ga0137379_11413617	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012356\|Ga0137371_11202113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300012909\|Ga0157290_10083512	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	907	Open in IMG/M
3300012918\|Ga0137396_11300343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	505	Open in IMG/M
3300012922\|Ga0137394_10004344	All Organisms → cellular organisms → Bacteria	10756	Open in IMG/M
3300012927\|Ga0137416_10099402	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300012929\|Ga0137404_11063110	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300012964\|Ga0153916_13173801	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	517	Open in IMG/M
3300012975\|Ga0134110_10141786	Not Available	989	Open in IMG/M
3300015245\|Ga0137409_11409808	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015264\|Ga0137403_11050923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	661	Open in IMG/M
3300015359\|Ga0134085_10520082	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300015371\|Ga0132258_11520717	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300015374\|Ga0132255_103133024	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300017656\|Ga0134112_10102150	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300017659\|Ga0134083_10572650	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300018028\|Ga0184608_10095603	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300018031\|Ga0184634_10520532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300018429\|Ga0190272_12056338	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300019879\|Ga0193723_1153326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	615	Open in IMG/M
3300020002\|Ga0193730_1010362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2638	Open in IMG/M
3300020004\|Ga0193755_1201542	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	567	Open in IMG/M
3300020193\|Ga0194131_10104321	All Organisms → cellular organisms → Bacteria	1526	Open in IMG/M
3300020198\|Ga0194120_10151295	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300021418\|Ga0193695_1113532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300025569\|Ga0210073_1019387	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300025904\|Ga0207647_10297854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	919	Open in IMG/M
3300025935\|Ga0207709_11235269	Not Available	616	Open in IMG/M
3300025972\|Ga0207668_10672948	Not Available	908	Open in IMG/M
3300026309\|Ga0209055_1011500	All Organisms → cellular organisms → Bacteria → Proteobacteria	4631	Open in IMG/M
3300026325\|Ga0209152_10125689	All Organisms → cellular organisms → Bacteria → Proteobacteria	976	Open in IMG/M
3300026328\|Ga0209802_1262630	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300026332\|Ga0209803_1254516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	605	Open in IMG/M
3300026360\|Ga0257173_1007977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1155	Open in IMG/M
3300026377\|Ga0257171_1039968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	807	Open in IMG/M
3300026524\|Ga0209690_1209182	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026537\|Ga0209157_1038471	All Organisms → cellular organisms → Bacteria	2670	Open in IMG/M
3300026547\|Ga0209156_10134655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300027657\|Ga0256865_1090193	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → unclassified Spirochaetaceae → Spirochaetaceae bacterium	777	Open in IMG/M
3300027815\|Ga0209726_10096946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1797	Open in IMG/M
3300027880\|Ga0209481_10352554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	751	Open in IMG/M
3300028587\|Ga0247828_10270816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	923	Open in IMG/M
3300028589\|Ga0247818_11158856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	551	Open in IMG/M
3300028597\|Ga0247820_10522289	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300028792\|Ga0307504_10419726	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300028828\|Ga0307312_10413323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	887	Open in IMG/M
3300030006\|Ga0299907_10428321	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300031538\|Ga0310888_10803848	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	583	Open in IMG/M
3300031720\|Ga0307469_10686764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	926	Open in IMG/M
3300031820\|Ga0307473_11552222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300031949\|Ga0214473_10728054	Not Available	1078	Open in IMG/M
3300032783\|Ga0335079_11711923	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300032954\|Ga0335083_10489232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1032	Open in IMG/M
3300033513\|Ga0316628_103719072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.81%
Host-Associated	Host-Associated	16.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.33%
Plants	Host-Associated → Plants	16.19%
Aquatic	Environmental → Aquatic	10.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.76%
Freshwater	Environmental → Aquatic → Freshwater	3.81%
Sediment	Environmental → Aquatic → Sediment	3.81%
Marine	Environmental → Aquatic → Marine	1.90%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.52%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.86%
Lake	Environmental → Aquatic → Freshwater → Lake	1.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.90%
Sand	Environmental → Terrestrial → Soil → Sand	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.95%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.95%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.05%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.86%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.95%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300020198	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015019 Mahale Deep Cast 65m	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025569	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095275

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0055465_103125021	3300004013	Natural And Restored Wetlands	ADAPAALAGLDLSDAERAAFVARDRRKINELGGYLHLVMSVPGLAAH*
Ga0062590_1022997691	3300004157	Soil	ALAGADLSADERAAFVARDMRRINELGGYLHLVMSIPGLAAH*
Ga0063356_1059889632	3300004463	Arabidopsis Thaliana Rhizosphere	AEPQAALADVDLSEEERSAFVARDARRINELGGYLHLVMSVPGIAGH*
Ga0066680_105368441	3300005174	Soil	EADAGTALAGADLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH*
Ga0066685_110838051	3300005180	Soil	TDPEAALAGADLTEAERAAFMARDMRKVNELGGYLHLVMSIPGLAAH*
Ga0066388_1017807062	3300005332	Tropical Forest Soil	ALAGADLSAEERAAFVARDMRRINELGGYLHLVMSIPGLAAH*
Ga0070689_1014680611	3300005340	Switchgrass Rhizosphere	AGADLTESERAAFVARDMRRINELGGYLHLVMSIPGHAAH*
Ga0070669_1018232161	3300005353	Switchgrass Rhizosphere	LAGLDLTEAERAAFVARDTRKINELGGYLHLVMSVPGLAAH*
Ga0070694_1004085233	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AAAVAGADLTESERAAFVARDMRRINELGGYLHLVMSIPGHAAH*
Ga0066686_106735922	3300005446	Soil	PAAVLAGADLSAEERAAFVARDMRRINELGGYLHLVMSIPGLAAH*
Ga0066686_111112191	3300005446	Soil	LDLTDAERAAFLARDMQRINALGGYLHLVMSVPGMAAHVTHPEPE*
Ga0066687_103935462	3300005454	Soil	TADPAAALAGLDLTEPERSAFIARDMRKINELGGYLHLVMSIPGLAAH*
Ga0070707_1010016391	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LADAPSVLAGLDLTEAERAAFIARDMRRINELGGYLHLVMSVPGLAAH*
Ga0070684_1009945361	3300005535	Corn Rhizosphere	DAAAALASVDLTEAERAAFVNHDMRRINELGGYLHLVMSVPGLAAH*
Ga0066697_100355564	3300005540	Soil	LADADLTEAERAAFLARDMRRINELGGYLHLVLSIPGLAVH*
Ga0066697_100985664	3300005540	Soil	AERSAFVARDMRRINELGGYLHLVMSIPGLAASQRATT*
Ga0066695_106599271	3300005553	Soil	NAERSAFVARDMRRINELGGYLHLVMSIPGLAASQRATT*
Ga0066692_102989522	3300005555	Soil	AAFRARDMERINALGGYLHLVMSVPGMAAHVTHTEPE*
Ga0066698_101827544	3300005558	Soil	EPERSAFIARDMRKINELGGYLHLVMSIPGLAAH*
Ga0066703_104451191	3300005568	Soil	MGPAASIGDLDLTDAERAAFVARDLRKVNELGGYLHLVISIPSLAAR*
Ga0066654_108880381	3300005587	Soil	LADADLTEAERAAFLARDMQRINELGGYLHLVLSIPGLAVH*
Ga0068859_1025294952	3300005617	Switchgrass Rhizosphere	SRDAAAAVAGADLTESERAAFVARDMRRINELGGYLHLVMSIPGHAAH*
Ga0066653_101531581	3300006791	Soil	LSADERAAFAARDMRRINELGGYLHLVLSIPGLAVHPPRH*
Ga0075431_1015127741	3300006847	Populus Rhizosphere	RDASAALAGADLSDVERAAFVARDMRAINELGGYLHLVMSIPGLAAH*
Ga0075424_1007113273	3300006904	Populus Rhizosphere	DPAAAIVDLDLTADERAAFVARDMRRINELGGYLHLVLSIPGLAIHPPRR*
Ga0075436_1015146222	3300006914	Populus Rhizosphere	REPNAALADVDLTDDERAAFIARDARRINELGGFLHLVMSVPGIAGH*
Ga0099794_106460331	3300007265	Vadose Zone Soil	DADLTHAERSAFVARDMRRINELGGYLHLVMSIPGLAASQRATT*
Ga0066710_1017412601	3300009012	Grasslands Soil	GRDLTDAERAAFLARDMERINALGGYLHLVMSVPGMAAHVMHAEHE
Ga0114129_101782353	3300009147	Populus Rhizosphere	DLTDDERAAFIARDARRINELGGFLHLVMSVPGIAGH*
Ga0114129_132855741	3300009147	Populus Rhizosphere	ASALAGLDLTEAEQAAFVARDMRRINELGGYLHLVMSVPGLAAH*
Ga0111538_133910251	3300009156	Populus Rhizosphere	ADLTEAEREAFVAHDMRRINELGGYLHLVMSIPGLAAH*
Ga0075423_126768232	3300009162	Populus Rhizosphere	FDLSDAERAAVLARDLHVLNDLGGYLHLLLSIPGFAPH*
Ga0114945_105345402	3300009444	Thermal Springs	ALAGLDLTEDERAAFLARDMRKLNELGGYLHLVMSVPGMAAHVTHADRH*
Ga0105238_113410712	3300009551	Corn Rhizosphere	ASVDLTEAERAAFVNHDMRRINELGGYLHLVMSVPGLAAH*
Ga0126374_108839741	3300009792	Tropical Forest Soil	LTEAERAAFVARDMRRINELGGYLHLVMSIPGLAAH*
Ga0105087_10746512	3300009819	Groundwater Sand	LDLTDAERAAFVARDMRRINELGGYLHLVMSVPGLAAH*
Ga0105064_10377081	3300009821	Groundwater Sand	DLTEAERAAFVAHDMRKINELGGYLHLVMSIPGLAAHGGRA*
Ga0126384_101417654	3300010046	Tropical Forest Soil	VADADLTDAERSAFVARDMRKINELGGYLHLVMSIPGLAAGQHRPT*
Ga0126382_115160732	3300010047	Tropical Forest Soil	DLTEAERAAFMARDMRKINELGGYLHLVMSIPGLAAH*
Ga0134111_104617892	3300010329	Grasslands Soil	AALAGADLTEAERAAFIARDMRKVNELGGYLHLVMSIPGLAAH*
Ga0126370_103362851	3300010358	Tropical Forest Soil	DADLTDAERSAFLARDMRRINELGGYLHLVMSIPGLAAGQHRPT*
Ga0126370_107063373	3300010358	Tropical Forest Soil	ADADLDDAERAAFLTRDMRKINELGGYLHLVMSIPGLAAH*
Ga0126372_100857634	3300010360	Tropical Forest Soil	FGADPAASTADLDLNAEERAAFVARDMRRINELGGYLHLVLSIPGLAVHAPRG*
Ga0126372_112207092	3300010360	Tropical Forest Soil	ADARGVLEGLDLTEEERAAFLARDMTRINALGGYLHLVMSVPGLAIHITHPERD*
Ga0137391_109306561	3300011270	Vadose Zone Soil	LAGADLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH*
Ga0137456_11257092	3300011428	Soil	DLTDAERAAFVARDMRKINELGGYLHLVMSVPGLAAH*
Ga0137338_11310722	3300012174	Soil	DLSDEERRAFVARDARRINELGGYLHLVMSVPGIAGH*
Ga0137388_113642392	3300012189	Vadose Zone Soil	EPEAALADVDLSDDERRAFVARDARRINELGGYLHLVMSVPGIAGH*
Ga0137383_101404931	3300012199	Vadose Zone Soil	ALAGADLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH*
Ga0137363_117306931	3300012202	Vadose Zone Soil	AGTALAGADLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH*
Ga0137399_102662761	3300012203	Vadose Zone Soil	PAAALAGLDLTEPERSAFVARDMRKINELGGYLHLVMSIPGLAAH*
Ga0137379_114136171	3300012209	Vadose Zone Soil	PAAALAGLDLTEPERSAFIARDMRKINELGGYLHLVMSVPGLAAH*
Ga0137371_112021131	3300012356	Vadose Zone Soil	ALDGLDLTDAERAAFLARDMRRINALGGYLHLVMSVPGMAAHVTHAEPE*
Ga0157290_100835122	3300012909	Soil	RAALADADLTEAEREAFVAHDMRRINELGGYLHLVMSIPGLAAH*
Ga0137396_113003432	3300012918	Vadose Zone Soil	LTAAERAAFEERDMRKINELGGYLHLVMSVPGLAAH*
Ga0137394_1000434414	3300012922	Vadose Zone Soil	RSAFVARDMRRINELGGYLHLVMSIPGLAASQRATT*
Ga0137416_100994021	3300012927	Vadose Zone Soil	ALAGLDLTDAERAAFEARDMRKINELGGYLHLVMSVPGLAAH*
Ga0137404_110631102	3300012929	Vadose Zone Soil	RAAFLARDMERINALGGYLHLVMSVPGMAAHVTHTEPE*
Ga0153916_131738011	3300012964	Freshwater Wetlands	NEVADLTDAERAAFIARDMRRINGLRGYLHLVMSVPDLAAH*
Ga0134110_101417861	3300012975	Grasslands Soil	LSADERAAFAARDMRRINELGGYLHLVLSIPGLAVHPPRR*
Ga0137409_114098081	3300015245	Vadose Zone Soil	REPEAALADVDLSDDERRAFIARDARRINELGGYLHLVMSVPGIAGH*
Ga0137403_110509232	3300015264	Vadose Zone Soil	GADLTEAERAAFVRRDMRALNELGGYLHLVLSIPGMAAH*
Ga0134085_105200821	3300015359	Grasslands Soil	PEAALAGADLTEAERAAFIARDMRKVNELGGYLHLVMSIPGLAAH*
Ga0132258_115207171	3300015371	Arabidopsis Rhizosphere	ADARAALAGLDLSEAERAAFVARDVRRINELGGYLHLVMSVPGLAAH*
Ga0132255_1031330241	3300015374	Arabidopsis Rhizosphere	TRTIADLDLTDPERAAFIARDLRKINELGGYLHLVMSVPGLAVH*
Ga0134112_101021501	3300017656	Grasslands Soil	TRDPGTAVADADLTDAERSAFVARDMRKINELGGYLHLVMSIPGLAASHRATT
Ga0134083_105726502	3300017659	Grasslands Soil	GLDLTDAERAAFLARDMQRINALGGYLHLVMSVPGMAAHVTHPEPE
Ga0184608_100956031	3300018028	Groundwater Sediment	TEAERAAFVARDMRAINELGGYLHLVMSIPGLAAH
Ga0184634_105205321	3300018031	Groundwater Sediment	FEADARAALAGLDLTDAERAAFVARDMRKINELGGYLHLVMSVPGLAAH
Ga0190272_120563382	3300018429	Soil	LAGLDLTDAERAAFEARDMRKINELGGYLHLVMSVPGLAAH
Ga0193723_11533262	3300019879	Soil	AGLDLTDAEQAAFEARDMRKINELGGYLHLVMSVPGLAAH
Ga0193730_10103621	3300020002	Soil	ADAAASLAGLDLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH
Ga0193755_12015421	3300020004	Soil	SVLAGLDLTEAERAAFIARDMRRINELGGYLHLVMSVPGLAAH
Ga0194131_101043211	3300020193	Freshwater Lake	LAGADLTDTERAAFVAHDMRKINELGGYLHLVMSIPGLAAH
Ga0194120_101512951	3300020198	Freshwater Lake	DLTDTERAAFVAHDMRKINELGGYLHLVMSIPGLAAH
Ga0193695_11135321	3300021418	Soil	AGLDLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH
Ga0210073_10193871	3300025569	Natural And Restored Wetlands	LDLTDAERAAFVARDMRKINELGGYLHLVMSVPGLAAH
Ga0207647_102978541	3300025904	Corn Rhizosphere	SALADLDLTEDERAAFIARDMRRINELGGYLHLVMSVPGLAAH
Ga0207709_112352691	3300025935	Miscanthus Rhizosphere	PAQAIADLDLSEVERAAFVERDRRRINELGGYLHLVMSIPGLARH
Ga0207668_106729481	3300025972	Switchgrass Rhizosphere	ARFVANGADALADLDLSNEERAAFLAHDMRKINELGGYLHLVMSIPGLAGH
Ga0209055_10115001	3300026309	Soil	LAGLDLTEPERSAFIARDMRKINELGGYLHLVMSIPGLAAH
Ga0209152_101256892	3300026325	Soil	GERAAFRARDMERINALGGYLHLVMSVPGMAAHVTHTEPE
Ga0209802_12626302	3300026328	Soil	EADAGTALAGADLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH
Ga0209803_12545162	3300026332	Soil	AAALAGADLTADERAAFVARDMRRINELGGYLHLVMSIPGLAAH
Ga0257173_10079773	3300026360	Soil	QADAAAALAGLDLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH
Ga0257171_10399682	3300026377	Soil	RAALVGLDLTDAERAAFVARDMRKINELGGYLHLVMSVPGLAAH
Ga0209690_12091821	3300026524	Soil	SAFVARDMRRINELGGYLHLVMSIPGLAASQRATT
Ga0209157_10384713	3300026537	Soil	DLTEAERAAFIARDMRKVNELGGYLHLVMSIPGLAAH
Ga0209156_101346552	3300026547	Soil	DAERAAFLARDMQRINALGGYLHLVMSVPGMAAHVTHPEP
Ga0256865_10901932	3300027657	Soil	DPAAAVAGLDLTDAERAAFIARDMKRINALGGYLHLVMSVPGLAAHVTHPEREA
Ga0209726_100969464	3300027815	Groundwater	LIGLDLTDAERAAFVARDMRKINELGGYLHLVMSVPGLAAH
Ga0209481_103525542	3300027880	Populus Rhizosphere	VVHADLTEAERAAFVARDMRRINELGGYLHLVMSIPGLAAH
Ga0247828_102708161	3300028587	Soil	VDLTEAERAAFVNHDMRRINELGGYLHLVMSVPGLAAH
Ga0247818_111588561	3300028589	Soil	DPGPAIATADLSDAERAAFVARDMRRINELGGYLHLVMSIPGLAAH
Ga0247820_105222892	3300028597	Soil	EALADLDLSNEERAAFLAHDMRKINELGGYLHLVMSIPGLAGH
Ga0307504_104197261	3300028792	Soil	YLADTTGSIVELDLTDAERAAFVARDMRRINELGGYLHLVMSVPGLAAH
Ga0307312_104133231	3300028828	Soil	GLDLTEAERAAFIARDMRRINELGGYLHLVMSVPGLAAH
Ga0299907_104283211	3300030006	Soil	EDAAGALAEADLTDAERAAFVARDMRQINELGGYLHLVMSIPGLAGH
Ga0310888_108038481	3300031538	Soil	ADADLTEAERAAFAAHDMRRINELGGYLHLVMSVPGLAAH
Ga0307469_106867641	3300031720	Hardwood Forest Soil	EPEAALANVDLTEDERRAFVARDARRINELGGYLHLVMSVPGIAGH
Ga0307473_115522222	3300031820	Hardwood Forest Soil	LTGIDLTEAERAAFVAHDMRRINELGGYLHLVMSVPGLAAH
Ga0214473_107280543	3300031949	Soil	RAAFIARDMTRINALGGYLHLVMSVPGLAAHVTHAERAD
Ga0335079_117119232	3300032783	Soil	AFLARDMTRINALGGYLHLVMSVPGLAVHITHPERE
Ga0335083_104892321	3300032954	Soil	DEERAAFLARDMTRINALGGYLHLVMSVPGLAVHITHPERE
Ga0316628_1037190721	3300033513	Soil	ADADLTEAERAAFATRDVRRINELGGYLHLVMSVPGLAAH

Hidden Markov Model


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