Metagenome / Metatranscriptome Family F095263

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095263
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	80 residues
Representative Sequence	YLPKRPIAKAFAHASWQQQQRAIENILTLRKQGWRGVDLQPHLDAVTQVEKVAVKCLKKGDWLLDHIEEELAFMRGSDLRR
Number of Associated Samples	86
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.90 %
% of genes near scaffold ends (potentially truncated)	92.38 %
% of genes from short scaffolds (< 2000 bps)	96.19 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.381 % of family members)
Environment Ontology (ENVO)	Unclassified (25.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.524 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.46% β-sheet: 0.00% Coil/Unstructured: 49.54%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF05231	MASE1	1.90
PF14870	PSII_BNR	0.95
PF04461	DUF520	0.95
PF07715	Plug	0.95
PF00211	Guanylate_cyc	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.90
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	1.90
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.90
COG1666	Cyclic di-GMP-binding protein YajQ, UPF0234 family	Signal transduction mechanisms [T]	0.95
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	87.62 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	87.62 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	86.67 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.67 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.67 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.67 %
Ignavibacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.67 %
unclassified Ignavibacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae	0.95 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	86.67 %
Ignavibacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	0.95 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02RH6ZJ	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
2088090014\|GPIPI_17184217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300000890\|JGI11643J12802_12127293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1595	Open in IMG/M
3300000956\|JGI10216J12902_108428523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300000956\|JGI10216J12902_123184413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300001139\|JGI10220J13317_10948324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300002568\|C688J35102_119801035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	779	Open in IMG/M
3300004114\|Ga0062593_102995315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300004156\|Ga0062589_102529712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300004157\|Ga0062590_101311424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300004479\|Ga0062595_101447460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300004479\|Ga0062595_101669500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300004643\|Ga0062591_101858800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	616	Open in IMG/M
3300004643\|Ga0062591_101955900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	603	Open in IMG/M
3300004643\|Ga0062591_102436774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300005093\|Ga0062594_100782061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300005288\|Ga0065714_10424985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300005294\|Ga0065705_10154836	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300005330\|Ga0070690_100716079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300005332\|Ga0066388_103460818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300005332\|Ga0066388_108042014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300005333\|Ga0070677_10207253	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005338\|Ga0068868_102228449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300005354\|Ga0070675_100567027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1028	Open in IMG/M
3300005354\|Ga0070675_100820141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300005434\|Ga0070709_10950121	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300005437\|Ga0070710_10087558	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300005437\|Ga0070710_10744102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300005437\|Ga0070710_10875755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300005439\|Ga0070711_100563029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	947	Open in IMG/M
3300005439\|Ga0070711_101385316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300005439\|Ga0070711_101788917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300005451\|Ga0066681_10450046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300005564\|Ga0070664_101713578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300005578\|Ga0068854_102001128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005764\|Ga0066903_101095909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1467	Open in IMG/M
3300005764\|Ga0066903_103310161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	871	Open in IMG/M
3300005764\|Ga0066903_103949167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300006028\|Ga0070717_11311406	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006046\|Ga0066652_101544977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300006046\|Ga0066652_101640761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300006791\|Ga0066653_10456389	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300006881\|Ga0068865_101965134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300006904\|Ga0075424_101125532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300009011\|Ga0105251_10660621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300009174\|Ga0105241_12195376	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300009176\|Ga0105242_10960866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300010326\|Ga0134065_10126089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	874	Open in IMG/M
3300010361\|Ga0126378_13225490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300010366\|Ga0126379_11482981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	784	Open in IMG/M
3300010373\|Ga0134128_12061227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300010398\|Ga0126383_11396198	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300011119\|Ga0105246_11993988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012208\|Ga0137376_10359581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1264	Open in IMG/M
3300012208\|Ga0137376_10509333	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300012285\|Ga0137370_10547953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300012906\|Ga0157295_10080360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300012912\|Ga0157306_10262351	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012951\|Ga0164300_10118974	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300012955\|Ga0164298_11547676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012957\|Ga0164303_10910371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300012958\|Ga0164299_11479138	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300012960\|Ga0164301_10635444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300012961\|Ga0164302_10899786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
3300012984\|Ga0164309_11400150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300012985\|Ga0164308_11644449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300012986\|Ga0164304_11217186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	609	Open in IMG/M
3300013296\|Ga0157374_10324864	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300013296\|Ga0157374_11306722	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300013297\|Ga0157378_12636014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300013306\|Ga0163162_11146610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	881	Open in IMG/M
3300014157\|Ga0134078_10234185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	763	Open in IMG/M
3300015200\|Ga0173480_11144519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	522	Open in IMG/M
3300015371\|Ga0132258_12942208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1182	Open in IMG/M
3300015371\|Ga0132258_13042840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1161	Open in IMG/M
3300015372\|Ga0132256_102029843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300015373\|Ga0132257_102849469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300016319\|Ga0182033_10089180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2235	Open in IMG/M
3300016341\|Ga0182035_11277961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300016357\|Ga0182032_10981968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300016371\|Ga0182034_10153406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1734	Open in IMG/M
3300017792\|Ga0163161_12100827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300018073\|Ga0184624_10440104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300018476\|Ga0190274_10899500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300021560\|Ga0126371_13790869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300025904\|Ga0207647_10818075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300025928\|Ga0207700_10861075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300025930\|Ga0207701_10470626	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300025930\|Ga0207701_10634473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300025939\|Ga0207665_10591632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	865	Open in IMG/M
3300025986\|Ga0207658_11021720	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300026555\|Ga0179593_1226372	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → unclassified Ignavibacteriaceae → Ignavibacteriaceae bacterium	2703	Open in IMG/M
3300030916\|Ga0075386_12162321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300031740\|Ga0307468_100510031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	956	Open in IMG/M
3300031945\|Ga0310913_10586249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	791	Open in IMG/M
3300031946\|Ga0310910_10332588	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300031947\|Ga0310909_10765589	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300032001\|Ga0306922_10621449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1143	Open in IMG/M
3300032064\|Ga0318510_10107509	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300032066\|Ga0318514_10430379	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	701	Open in IMG/M
3300032261\|Ga0306920_100034884	All Organisms → cellular organisms → Bacteria	7224	Open in IMG/M
3300032261\|Ga0306920_100643399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1566	Open in IMG/M
3300032261\|Ga0306920_103692380	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300033158\|Ga0335077_10945911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	864	Open in IMG/M
3300033289\|Ga0310914_10112093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2363	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.14%
Host-Associated	Host-Associated	22.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.19%
Plants	Host-Associated → Plants	22.86%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.52%
Sediment	Environmental → Aquatic → Sediment	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.05%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_04498870	2070309004	Green-Waste Compost	MNGSKISAVFPAIRSALFTDLLYMPKRPIAKAFANASWQQQKRAIENLITLRKNGWKGVNLQVHFDAVTQAEKVAAKCLKEDDWVLEKIQEELAFMRGADLRS
GPIPI_01349330	2088090014	Soil	LGFTDMLYLPKRPIAKAFANASWQEQRRAIENILTLRKEGWRGVDLQPHFDAVTQVEKVAVKCLKKGDWLLDHIEEELAFMRGADFRR
JGI11643J12802_121272933	3300000890	Soil	LLYLPKRPIAKAFANASWQQQRHAIDNLVTLRKQGWKGVNLKVHFDVVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
JGI10216J12902_1084285232	3300000956	Soil	KRPIAKAFANASWQQQRRAIENILTLRKEGWRGVNLQLRFDAITEVGKVATKCLKKGDWLLDHIEEELAFMRGTASRA*
JGI10216J12902_1231844131	3300000956	Soil	KRPIAKAFANASWQQQARAIENILTLSKQGWRGVDLQPHFDAVSQVEKVAVKCLKKGDWLLDHIEEELAFMRGADFRR*
JGI10220J13317_109483241	3300001139	Soil	VSLGFTDMLYLPKRPIAKAFANASWQQQQRAIENIQTLRNHGWRGVDLQPHLEAVTQVEKVAVKCLEEGDWLLDHIEEELAFMRGADLRR*
C688J35102_1198010351	3300002568	Soil	TDLLYLPKRPIAKAFANASWQQQRRAIENLVTLRKQGWKGLNLKVHFDAVTQVEKVAQNCLKPDDWLLEHIQEELAFMRGADLRR*
Ga0062593_1029953151	3300004114	Soil	SWQQQRRAIESLATLRKEGWKGVNLKLHFDAVTQVEKVAKKCLKQDDWLLDHIQEELAFMRGADFRR*
Ga0062589_1025297121	3300004156	Soil	MALPSRDRTQRNAIENIVGLCKHGWKGVNLRLHLDAVRQVEKVAVKCLKKGDWVFDHIEEELAFMRGADFRR*
Ga0062590_1013114242	3300004157	Soil	LPKRPIAKAFANASWQQQRRAIESLVTLRKQGWKGVNLDVHVDAVTQVEEVAQKCLKPDDWLLEHIEEELAFVRGADLRR*
Ga0062595_1014474601	3300004479	Soil	SLSAYFVALCFTDLLYLPKRPIAKAFANASWQQQRRAIDSLVTLRKQGWRGVNLKVHFDAVTQVEKVAQKSLKPDDWLLDHIQEELAFMRGADLRR*
Ga0062595_1016695002	3300004479	Soil	TDALYLPKRPIAKAFSNASWEQQEHAIENIITLRKHGWKGVDLQLHLDAATQVEKVAVKCLKEGDWVLDHMEEELAFMRGTDFRR*
Ga0062591_1018588002	3300004643	Soil	SWQQQHRAIENILTLRKQGWKGVDLQPHFDAVTQVEKVAVTCLKKGDWLLDHMEEELAFMRGADFRR*
Ga0062591_1019559001	3300004643	Soil	SLSSYFVSLAFTDLLYLPKRPIARAFSNASWQQQQRAIESIVTLRKHGWKGINLQVHFDAVTQVEKVAVRCLKPDDWLRNRMEEELAFARGTDLRR*
Ga0062591_1024367742	3300004643	Soil	YFVSLCFTDLLYLPKRPIAKAFANASWQQQRRAIESLVTLRKEGWKGVNLKLHFDAVTQVEKVAKKCLKQDDWLLDHIQEELAFMRGADFRR*
Ga0062594_1007820611	3300005093	Soil	LYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0065714_104249852	3300005288	Miscanthus Rhizosphere	FTDLLYLPKRPIAKAFANASWQQQRHAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0065705_101548361	3300005294	Switchgrass Rhizosphere	AKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKAAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0070690_1007160791	3300005330	Switchgrass Rhizosphere	QQRAIENILTLRKQGWRGVDLQPHLDAVTQVEKVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0066388_1034608182	3300005332	Tropical Forest Soil	KAFSNASWQQQERAIENIITLRKHGWRGVDLQLHFDAATQVEKVAVKCLKKGDWVLDHMEEELSFMRGADFRR*
Ga0066388_1080420141	3300005332	Tropical Forest Soil	FANASWQQQRRAVDNIMTLREHGWKGVNMELHFDAVRQVEKVAAKCLKRGDWVLDHIEEELAFMRGTDFRR*
Ga0070677_102072532	3300005333	Miscanthus Rhizosphere	IAKAFANASWQQQHRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0068868_1022284491	3300005338	Miscanthus Rhizosphere	LGFTDMLYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVEKVAVKCLKEGDWLLDHIEGELAFMRGAEFHR*
Ga0070675_1005670272	3300005354	Miscanthus Rhizosphere	LYLPKRPIAKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0070675_1008201412	3300005354	Miscanthus Rhizosphere	YLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0070709_109501212	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AIENILTLRKQGWRGIDLQPHLDAVTQVEKVAVKCLKKGDWLLDHMQEELAFMRGEGFRR
Ga0070710_100875581	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	SWQEQQRAIENILALRKGGWRGVDLQLHFDAVTQVEKAAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0070710_107441022	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	REIENILTLRKQGWSGIDLQPHFDAVTQVERAAVKCLQRCNCLLDHGEEEFAFMRGADLQR*
Ga0070710_108757552	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LLYLPKRPIAKAFANASWRQQRHAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGTDLRR*
Ga0070711_1005630291	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GYFVALCFTDALYLPKRPIAKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0070711_1013853161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AIENILTLRKEGWRGVHLQLHLDALTQVEKVAVKSLKKGDWLLDHIEGELAFMRGADFRR
Ga0070711_1017889171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PKRPIAKAFANANWQAQRRAIEEIKTLRKHGWTGVDLQVHFDAVTQVEKAAAKCLQEGDWVRNHIAEELAFMKGAQFRP*
Ga0066681_104500462	3300005451	Soil	SLSAYFVALGFTGALYLPKRPIAKAFANASWQQQQRAIENIITLRKHGWKGVNMQLHLDAVSQVEKVAMNRSEEGRLGARSHRGELSFMRGADFRP*
Ga0070664_1017135782	3300005564	Corn Rhizosphere	RSLSAYFVALCFTDLLYLPKRPIAKAFANASWQQQRHAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0068854_1020011281	3300005578	Corn Rhizosphere	AIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR
Ga0066903_1010959092	3300005764	Tropical Forest Soil	SLSAYFVSLCFTDLLYLPKRPIAKAFANASWQQQRRAIESLVTLRKQGWKGINLKLHVDAATQVEKVAQKSLKPDDWLLDHIQEELAFMRGADLRR*
Ga0066903_1033101612	3300005764	Tropical Forest Soil	RPIAKAFANASWQQQRRAIESLVTLRKHGWRGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIEEELAFMRGADLRR*
Ga0066903_1039491671	3300005764	Tropical Forest Soil	LYLPKRPIAKAFANASWQQQRRAVDNIMTLREHGWKGVNMELHFDAVRQVEKVAAKCLKRGDWVLDHIEEELAFMRGTDFRR*
Ga0070717_113114061	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FANASWQQQQRAIENIQTLRKHGWRGVDLQPHLEAVTQVEKVAVKCLEEGDWLLDHIEEELAFMRGADLRR*
Ga0066652_1015449771	3300006046	Soil	PIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAIKCLKKGDWLLDHIEGELAFMRGADFRR*
Ga0066652_1016407611	3300006046	Soil	ASWQQQRRAIESLVTLRKQGWKGINLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0066653_104563891	3300006791	Soil	SWQQQRRAIESLVSLHKQGWKGINLKVHLDAVTQVEKVAQKCLKPDDWLLDRIEEELAFMRGADLRR*
Ga0068865_1019651341	3300006881	Miscanthus Rhizosphere	YFVSLGFTDMLYLPKRPIAKAFANASWQQQQRAIENIQTLRKHGWRGVDLQPHLEAVTQVEKVAVKCLKEGDWLLDHIEGELAFMRGAEFHR*
Ga0075424_1011255322	3300006904	Populus Rhizosphere	RPIARAFANGSWQQQHRAIENLASLRKHGWKGVNLQLHFDAVTQVEKVAMKSLKQGDWLLDRIEEELAFMRGADLRR*
Ga0105251_106606211	3300009011	Switchgrass Rhizosphere	AYFVALCFTDLLYLPKRPIAKAFANASWQQQRRAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0105241_121953762	3300009174	Corn Rhizosphere	RPIAKAFANASWQQQRRAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0105242_109608662	3300009176	Miscanthus Rhizosphere	YFVSLGFTDMLYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0134065_101260891	3300010326	Grasslands Soil	NASWQQQRRAVDNIMTLREHGWKGVNMQLHFDAVRQVEKAAAKCLKRGDWVLDHIEEELAFMRGTDFRC*
Ga0126378_132254902	3300010361	Tropical Forest Soil	FANASWRQQRQAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADFRR*
Ga0126379_114829811	3300010366	Tropical Forest Soil	LYLPKRPIAKAFANANWQEQRRAIENIVTLRKHGWKGITMPVHVDAVTEVEQVAVKCLREGEWVRDHIAEELAFVRGADVRR*
Ga0134128_120612271	3300010373	Terrestrial Soil	SLSGYFVSLGFTDALYLPKRPIAKAFSNASWQQQERAIENIITLRKHGWRGVDLNLHLDAASQVEKVAVQCLKKGDWVLDHMQEELAFMRGNDFRR*
Ga0126383_113961981	3300010398	Tropical Forest Soil	KAFANASWQHQRRAIESLITLRKHGWKGVNLKLHFDAVTQVEKAAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0105246_119939881	3300011119	Miscanthus Rhizosphere	GYFVSLGFTDMLYLPKRPIAKAFAHASWQQQQRAIENILTLRKQGWRGVDLQPHLDAVTQVEKVAVKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0137376_103595813	3300012208	Vadose Zone Soil	SLSGYFVALCFTDALYLPKRPIAKAFANASWQEQRRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0137376_105093332	3300012208	Vadose Zone Soil	ASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVATKCLKKGDWLLDHIEGQLAFMRGADFHR*
Ga0137370_105479531	3300012285	Vadose Zone Soil	ARAVASARCRERRCVIESLVTLRKKGWKGINLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0157295_100803602	3300012906	Soil	FSNASWQQQQRAIESIVTLRKHGWKGINLQVHFDAVTQVEKVAVRCLKPDDWLRNRMEEELAFARGTDLRR*
Ga0157306_102623511	3300012912	Soil	ASWQEQQRAIENILALRKGGWRGVDLQLHFDAVTQVEKAAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0164300_101189741	3300012951	Soil	RAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0164298_115476762	3300012955	Soil	LCFTDLLYLPKRPIAKAFAHSSWQQQRRAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR*
Ga0164303_109103711	3300012957	Soil	MLYLPKRPIAKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKSDWLLDHLEGELAFMRGADFRR*
Ga0164299_114791381	3300012958	Soil	ENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0164301_106354442	3300012960	Soil	YLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVERVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0164302_108997862	3300012961	Soil	RSLSAYFVALCFTDLLYLPKRPIAKAFANASWQQQRHAIENLATLRKEGWKGVNLKLHFDAVTQVEKVAKKCLKQDDWLLDHIQEELAFMRGADLRR*
Ga0164309_114001501	3300012984	Soil	YFVALCFTDALYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR*
Ga0164308_116444491	3300012985	Soil	NASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR*
Ga0164304_112171862	3300012986	Soil	SGYFVALCFTDLLYLPKRPIARAFAHASWQQQRRAIESLVALRKEGWKGVNLKVHFDAVTQVEKVAKKCLKQDDWLLDHVQEELAFMRGADLRR*
Ga0157374_103248643	3300013296	Miscanthus Rhizosphere	YLPKRPIAKAFAHASWQQQQRAIENILTLRKQGWRGVDLQPHLDAVTQVEKVAVKCLKKGDWLLDHIEEELAFMRGSDLRR*
Ga0157374_113067222	3300013296	Miscanthus Rhizosphere	YLPKRPIAKAFAHASWQQQQRAIENILTLRKEGWRGVDLQLHFDALTQVEKVAIKCLKKGDWLLDHVDGELAFMRGADFHR*
Ga0157378_126360142	3300013297	Miscanthus Rhizosphere	SLGFTDMLYLPKRPIAKAFANANWQQQQRAIENILMLRKQGWRGVDLQPHLDAVTQVEKVAVKCLKKGDWLLDHIEEELAFMRGSDLRR*
Ga0163162_111466102	3300013306	Switchgrass Rhizosphere	FVALCFTDLLYLPKRPIAKAFANASWQQQRRAIESLAALRKEGWKGVNLKVHFDAVTQVEKVAKKCLKQDDWLLDHIQEELAFMRGADLRR*
Ga0134078_102341851	3300014157	Grasslands Soil	LCFTDALYLPKRPIAKAFANASWQQQRRAVDNIMTLREHGWKGVNMQLHFDAVRQVEKAAAKCLKRGDWVLDHIEEELAFMRGTDFRC*
Ga0173480_111445192	3300015200	Soil	IESLVTLRKQGWKGVNLDVHVDAVTQVEEVAQKCLKPDDWLLEHIEEELAFVRGADLRR*
Ga0132258_129422081	3300015371	Arabidopsis Rhizosphere	SGYFVALGFTDALYLPKRPIAKAFANASWQQQERAIQNIITLRKHGWKGVDLHLHLDAVSQVEKVAAKCLKKGDWVLGHIEEELAFMRGADFRH*
Ga0132258_130428401	3300015371	Arabidopsis Rhizosphere	RAIENIITLRKHGWRGVDLNLHLDAASQVEKVAVQCLKKGDWVLDHMQEELAFMRGTDFRR*
Ga0132256_1020298432	3300015372	Arabidopsis Rhizosphere	FTDMLHLPKRPIAKAFANASWQQQQRAIENILALRKHGWRGVDLQPHLEAVTQVEKVAVKCLKEGDWLLDHIEEELAFMRSKDSRR*
Ga0132257_1028494691	3300015373	Arabidopsis Rhizosphere	KRPIAKAFANASWQQQRHAIENLVTLRKQGWKGVNLKVHFDVVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGTDLRR*
Ga0182033_100891802	3300016319	Soil	CFTDMLYLPKRPIAKAFANASWQQQRRAIENMINLRKHGWKGVNMQLHLDAVTQVEKVAVKCLKRGDWVLDHMQEEVAFMRGADLRR
Ga0182035_112779611	3300016341	Soil	SLSGYFVSLAFTDLLYLPKRPIAKAFANASWQQQRRAIENIGALRKHGWRGVNLQLHFDAINEVEKVAAKCLQKNDWLLDHIEEELAFMRGADLRR
Ga0182032_109819681	3300016357	Soil	MLYLPKRPIAKAFANANWQQQQHAIENILSLRKQGWRGVDLQLHFDAVTQVEKVAIKCLKKGDWLLDHIEGELAFMRGSDL
Ga0182034_101534061	3300016371	Soil	MLYLPKRPIAKAFANANWQQQQHAIENILSLRKQGWRGVDLQLHFDAVTQVEKVAIKCLKKGDWLLDHIEG
Ga0163161_121008271	3300017792	Switchgrass Rhizosphere	RRAIESLATLRKEGWKGVNLKVHFDAVTQVEKVAKKCLKEDDWLLDHIQEELAFMRGADLRR
Ga0184624_104401042	3300018073	Groundwater Sediment	SLSGYFVSLCFTDLLYLPKRPIAKAFAHASWQEQRRAIESLVTLRKQGWKGVNVKVHVDAVTQVEKVAHKCLKPDDWLLDHIQEELAFMRGADLRR
Ga0190274_108995001	3300018476	Soil	AFANASWQQQRRAIESIVTLRKQGWKGITLQLHFDAVTQVEKVAEKCLKPDDWLLDHIQEELAFMRGAVLRR
Ga0126371_137908691	3300021560	Tropical Forest Soil	ANAFANASWQQRERAIENIITLRKHGWKGVDLQLHLDAVSQVEKVAVKCLKKGDWLLDHLEEELAFMRGADFRR
Ga0207647_108180751	3300025904	Corn Rhizosphere	LSGYFVSLGFTDMLYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR
Ga0207700_108610752	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PKRPVAKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR
Ga0207701_104706262	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LCFTDLLYLPKRPIAKAFANASWQQQRRAIESLATLRKQGWKGVNLKVHFDAVTQVEKVAKKCLKEDDWLLDHIQEELAFMRGADLRR
Ga0207701_106344732	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	YFVSLGFTDMLYLPKRPMAKAFANASWQQQQRAIENIQTLRKHGWRGVDLQPHLEAVTQVEKVAVKCLEEGDWLLDHIEEELAFMRGADLRR
Ga0207665_105916322	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KRPIAKAFANASWQQQQRAIENILTLRKEGWRGVDLQLHFDAFTQVEKVAIKCLKKGDWLLDHVEGELAFMRGADFHR
Ga0207658_110217202	3300025986	Switchgrass Rhizosphere	IENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR
Ga0179593_12263723	3300026555	Vadose Zone Soil	QQRHAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGTDLRR
Ga0075386_121623211	3300030916	Soil	ANASWQQQRRAIESLVTLRKQGWKGVNLKVHFDAVTQVEKVAEKCLKPDDWLLDHIQEELAFMRGADFRR
Ga0307468_1005100312	3300031740	Hardwood Forest Soil	FVSLGFTDMLYLPKRPIAKAFANASWQQQHRAIENILTLRKEGWRGVDLQPHLDAVTQVENVAVKCLKKGDWLLDHIEGELAFMRGADFHR
Ga0310913_105862491	3300031945	Soil	VSLGFTDMLYLPKRPIAKAFANANWQQQQHAIENILSLRKQGWRGVDLQLHFDAVTQVEKVAIKCLKKGDWLLDHIEGELAFMRGSDLRG
Ga0310910_103325882	3300031946	Soil	QAIESVITLRKQGWKGINLKVHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLR
Ga0310909_107655892	3300031947	Soil	WQQQQHAIENIITLRKHGWRGVDLKLHFDAATQVEKVAVNCLKKGDWVLDHMEEELAFMRGADFRG
Ga0306922_106214492	3300032001	Soil	PKRPIAKAFANASWQQQRRAIESLVTLRKQGWRGVNLKLHFDAVTQVEKVAQKCLKPDDWLLDHIQEELAFMRGADLRR
Ga0318510_101075092	3300032064	Soil	QQQRRAIENMINLRKHGWKGVNMQLHLDAVTQVEKVAVKCLKRGDWVLDHMQEEVAFMRGADLRR
Ga0318514_104303791	3300032066	Soil	VALCFTDMLYLPKRPIAKAFANASWQQQRRAIENMINLRKHGWKGVNMQLHLDAVTQVEKVAVKCLKRGAWVLDHIQEELAFMRGADLRR
Ga0306920_1000348842	3300032261	Soil	MLYLPKRPIAKAFANANWQQQQHAIENILSLRKQGWRGVDLQLHFDAVTQVEKVAIKCLKKGDWLLDHIEGELAFMRGSDLRG
Ga0306920_1006433993	3300032261	Soil	LYLPKRPIAKAFANASWQQQRRAIENMINLRKHGWKGVNMQLHLDAVTQVEKLAVKCLKRGDWVLDHIQEELAFMRGADLRR
Ga0306920_1036923801	3300032261	Soil	DLLYLPRRPIARAFAHASWQQQHRAIESLVSLKEHGWKGISVKLHVDAATQVEKVAKKSLKQGDWLLDRIEEELSFIRGADLRR
Ga0335077_109459112	3300033158	Soil	CFTDLLYLPKRPIARSFANASWQQQHGAIENLVSLRTHGWKGVNLRLHFDAVTQVEKVALKSLKQGDWLLDRIEEELAFMRGADLRR
Ga0310914_101120932	3300033289	Soil	MLYLPKRPIAKAFANANWQQQQHAIENILSLRKQGWRGVDLQLHFDAVTQVEKVAIKCLKKGDWLLDHIEGELAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095263

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences