Metagenome / Metatranscriptome Family F095242

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F095242
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	117 residues
Representative Sequence	MASNAVTALPSRDAVRDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRPWS
Number of Associated Samples	91
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.62 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.191 % of family members)
Environment Ontology (ENVO)	Unclassified (34.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.762 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.40% β-sheet: 0.00% Coil/Unstructured: 36.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00072	Response_reg	82.86
PF12264	Waikav_capsid_1	0.95
PF01326	PPDK_N	0.95
PF00082	Peptidase_S8	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	78.10 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	77.14 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	68.57 %
Unclassified	root	N/A	9.52 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.95 %

Name	Rank	Taxonomy	Distribution
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	24.76 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	23.81 %
Unclassified	root	N/A	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.95 %

Name	Rank	Taxonomy	Distribution
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	24.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.81 %
Unclassified	root	N/A	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.95 %

Name	Rank	Taxonomy	Distribution
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	24.76 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.81 %
Unclassified	root	N/A	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.95 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.95 %

Name	Rank	Taxonomy	Distribution
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	23.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.81 %
Unclassified	root	N/A	9.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	4.76 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.95 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101446479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300000956\|JGI10216J12902_110950988	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300001536\|A1565W1_10317653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1557	Open in IMG/M
3300004463\|Ga0063356_101449621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1013	Open in IMG/M
3300004479\|Ga0062595_100028446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2256	Open in IMG/M
3300005093\|Ga0062594_101906026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631	Open in IMG/M
3300005174\|Ga0066680_10601761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	688	Open in IMG/M
3300005337\|Ga0070682_100167408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1524	Open in IMG/M
3300005355\|Ga0070671_100954567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300005366\|Ga0070659_100481296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1056	Open in IMG/M
3300005445\|Ga0070708_101174601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	718	Open in IMG/M
3300005447\|Ga0066689_10571194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300005459\|Ga0068867_100596902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	962	Open in IMG/M
3300005471\|Ga0070698_100078867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3291	Open in IMG/M
3300005549\|Ga0070704_100119934	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300005557\|Ga0066704_10789913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	591	Open in IMG/M
3300005559\|Ga0066700_11083405	Not Available	524	Open in IMG/M
3300005561\|Ga0066699_10774800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300005564\|Ga0070664_100973488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	797	Open in IMG/M
3300005569\|Ga0066705_10216822	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300005575\|Ga0066702_10433781	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005614\|Ga0068856_102242087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300005616\|Ga0068852_100183128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1971	Open in IMG/M
3300005616\|Ga0068852_100700066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1023	Open in IMG/M
3300005891\|Ga0075283_1028563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	902	Open in IMG/M
3300006046\|Ga0066652_100146186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1976	Open in IMG/M
3300006794\|Ga0066658_10231578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300006796\|Ga0066665_11253869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	567	Open in IMG/M
3300006797\|Ga0066659_10810727	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006797\|Ga0066659_11735366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300006804\|Ga0079221_10484798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	797	Open in IMG/M
3300006804\|Ga0079221_10871712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	656	Open in IMG/M
3300006844\|Ga0075428_102530016	Not Available	525	Open in IMG/M
3300006852\|Ga0075433_10648980	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300006904\|Ga0075424_101434696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300009012\|Ga0066710_100301824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2346	Open in IMG/M
3300009012\|Ga0066710_101360286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300009137\|Ga0066709_100753310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1406	Open in IMG/M
3300009137\|Ga0066709_100977516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1238	Open in IMG/M
3300009137\|Ga0066709_101411254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1012	Open in IMG/M
3300009156\|Ga0111538_10829582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1171	Open in IMG/M
3300009545\|Ga0105237_11512950	Not Available	678	Open in IMG/M
3300010229\|Ga0136218_1013674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300010335\|Ga0134063_10343092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300011992\|Ga0120146_1033189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	904	Open in IMG/M
3300012210\|Ga0137378_11314162	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012211\|Ga0137377_10817000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300012358\|Ga0137368_10809108	Not Available	579	Open in IMG/M
3300012958\|Ga0164299_10270137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300012961\|Ga0164302_11575831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300012972\|Ga0134077_10455875	Not Available	560	Open in IMG/M
3300012975\|Ga0134110_10122929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1060	Open in IMG/M
3300012975\|Ga0134110_10622762	Not Available	503	Open in IMG/M
3300012977\|Ga0134087_10263774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	794	Open in IMG/M
3300012987\|Ga0164307_10501939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	917	Open in IMG/M
3300013307\|Ga0157372_11804599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300014157\|Ga0134078_10603033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300014497\|Ga0182008_10804959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300015357\|Ga0134072_10379953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300018061\|Ga0184619_10000311	All Organisms → cellular organisms → Bacteria	16451	Open in IMG/M
3300018431\|Ga0066655_10231137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1167	Open in IMG/M
3300018433\|Ga0066667_10596317	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300018482\|Ga0066669_10173030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1619	Open in IMG/M
3300020070\|Ga0206356_10420103	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300020082\|Ga0206353_10623487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1313	Open in IMG/M
3300020082\|Ga0206353_11703558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300021363\|Ga0193699_10233199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	766	Open in IMG/M
3300024232\|Ga0247664_1162031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	527	Open in IMG/M
3300025904\|Ga0207647_10522493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300025906\|Ga0207699_10904442	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300025911\|Ga0207654_10546047	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300025912\|Ga0207707_10327627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1321	Open in IMG/M
3300025920\|Ga0207649_10268130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1236	Open in IMG/M
3300025920\|Ga0207649_11413109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300025922\|Ga0207646_10676932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	923	Open in IMG/M
3300025924\|Ga0207694_11130710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	663	Open in IMG/M
3300025928\|Ga0207700_11469114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300025929\|Ga0207664_10075656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2723	Open in IMG/M
3300025931\|Ga0207644_10662762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	869	Open in IMG/M
3300025933\|Ga0207706_11488240	Not Available	553	Open in IMG/M
3300025935\|Ga0207709_10774521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	773	Open in IMG/M
3300025937\|Ga0207669_10619017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	882	Open in IMG/M
3300025939\|Ga0207665_11689921	Not Available	501	Open in IMG/M
3300025981\|Ga0207640_10199256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1516	Open in IMG/M
3300026078\|Ga0207702_11259748	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300026142\|Ga0207698_10789866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300026142\|Ga0207698_12213126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300026301\|Ga0209238_1108298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	933	Open in IMG/M
3300026305\|Ga0209688_1015876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300026527\|Ga0209059_1349423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	502	Open in IMG/M
3300026538\|Ga0209056_10625434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300027821\|Ga0209811_10101965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300028799\|Ga0307284_10175754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300028884\|Ga0307308_10586626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300031716\|Ga0310813_10431092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300031716\|Ga0310813_12003969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300031938\|Ga0308175_101707453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	705	Open in IMG/M
3300031938\|Ga0308175_102442821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300031938\|Ga0308175_102471457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	582	Open in IMG/M
3300031939\|Ga0308174_10888368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	752	Open in IMG/M
3300032180\|Ga0307471_102526220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300032892\|Ga0335081_12479364	Not Available	536	Open in IMG/M
3300033158\|Ga0335077_11309876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300033412\|Ga0310810_10314065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1674	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.38%
Host-Associated	Host-Associated	26.67%
Engineered	Engineered	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	26.67%
Aquatic	Environmental → Aquatic	0.95%
Lab Enrichment	Engineered → Lab Enrichment	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.52%
Sediment	Environmental → Aquatic → Sediment	0.95%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.05%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.95%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.95%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.95%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005891	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_304	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010229	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1	Engineered	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1014464791	3300000956	Soil	MATTAVTASPRRAALRDPVLLLPVVVAAGLAVGWLGVHEQVSGTRIAADLALSWALVAASVVVLQRPRWRRAMWLLAATAFALLGADLEWASSHALWTLGLLLEGLWAAFLVQLVLTFPEGRSWSRTAQVAIAGAYAAT
JGI10216J12902_1109509881	3300000956	Soil	MASTAVESSPSRSVIRDPVLLLPLAVAAGLAVGWLAVREHVSGPRIAADLALAWGLVAASLVVLERPRRRQVGWLLAAAGFALLGADLEWAGSHMLWTLGFVLEGLWAASLVQLVLTFP
A1565W1_103176531	3300001536	Permafrost	MASTAVAPSPGRGVIRDPVLLLPLAVAAGLAVGWLAGRAHVSGPRTAADLALAWGLVMASLVVLERPRWRQVGWLLAATAFALLGADLEWADSHVLWTLGFVIEGLWAAFLAQLVLTFPE
Ga0063356_1014496211	3300004463	Arabidopsis Thaliana Rhizosphere	MTSTAVTASPSRDVIRDPVLLLPLAVAAGLAVGWLGVDHQAAGTRIAADLALAWALTAASLVVLERPRWQRARWLLAATAFTLLSADLDWASSHALWTLGFVLEGLWAAFLVQLVLTFPE
Ga0062595_1000284461	3300004479	Soil	MTSTAVTASPSRDVIRDPVLLLPLAVAAGLAVGWLGVDHQAAGTRIAADLALAWALTAASLVVLERPRWQRARWLLAATAFTLLSADLDWASSHALWTLGFVLEGLWAAFLVQLV
Ga0062594_1019060261	3300005093	Soil	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSRALWTLGFVLEGVWVAFLVQLVLTFPEGRSWSR
Ga0066680_106017611	3300005174	Soil	MASTAVTASPSRDAIRDPVLLLPVVVAAGLAIGWLGVHERVSGTRIAADLALSWALVAASLVVLERPRWRRGRLLLVATAFALLGADISWASSHPLWTLGFVLEGLWAALLVQFVVTFPEGRPWSR
Ga0070682_1001674081	3300005337	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLASTPFALLGADLEWATSHALWTLGF
Ga0070671_1009545671	3300005355	Switchgrass Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSRALWTLGFVLEGVWVAFLVQLVLTFPEGRSWSRFARAA
Ga0070659_1004812963	3300005366	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLASTPFALLGADLEWATSHALWTLGFLLEGLWLAFLV
Ga0070708_1011746011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGSTAVTASPSRDVIRDPVLLLPLIVAAGLAVGWLGIDHHATGTRIAANLALAWTLTAASVVLLERPRWRRVRWLLAAAAFALLGADLEWANSHALWTLGFVLEGLWAAFLVQLVLTFPEGR
Ga0066689_105711942	3300005447	Soil	MTSAAITASPRRGVLRDPVLLLPVAVAAGLVIGWLGVHEGVPGARIAADLALSWALVAASVVMLERPRWRKTRWLLAATAFALLGADLEWAGPHVVWTLGFVLEGLWAALLLQVVLTFPEGRPWSRIARVAIVGAYAV
Ga0068867_1005969021	3300005459	Miscanthus Rhizosphere	MASRTVTVSPSRDVIRDPVLLLPLVVAAGLAVGWLGVHDQRVSGERVAADLALSWALVGASLALLERPRWRRSRWLLAAAAFALLGADLEWARSHALWTVGFLFAGLWAALLVQLVLTFPQGRSWSRLARGAIVGAYTLTVGGQIVG
Ga0070698_1000788671	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MASAVLRLSPAREVLRDPVLLLPVIVATGIAAGRLGEHGDVAGTRIAADLALSWALVAAGLAVWQRPRWRRAGVLLFATSFAVLGADLAWANSHTLWTLGFLLEGLWAAILVHLVLTFPDGRRRSRLAPFA
Ga0070704_1001199341	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWAT
Ga0066704_107899131	3300005557	Soil	MTSAAVTASPRRGVLGDPVLVVPVVVAAGLAVGWLGVHEHISGTRIAADLALSWALVSASLVVLARPRWRRVRFLLAATAFVLLGADLEWARSHVLWTLGLLLEGLWAAFLVQLVLTFPEGRSWSRAAQVAISGAY
Ga0066700_110834052	3300005559	Soil	MASTAVTASPSRDAIRDPVLLVPLVVAVGLSIGWLGVHERVSGTRVAADLALSWALVAASVVMLERPRWRKTRWLLAATAFALLGADLEWAGPHVVWTLGFVLEGLWAALLLQVVLTF
Ga0066699_107748001	3300005561	Soil	MASNAATALPGRDAVRDPVLLFPLAVAAGLAVGWIGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRP
Ga0070664_1009734881	3300005564	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLAATPFALLGADLEWATSH
Ga0066705_102168223	3300005569	Soil	MASTAVTASPSRAAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWASSHTVWTLGFVLEGLWAA
Ga0066702_104337812	3300005575	Soil	MASTAVTASPSRDAIRDPVLLVPLVVAVGLSIGWLGVHERVSGTRVAADVALSWALVAASVVMLERPRWRKTRWLLAATAFALLGADLEWAGP
Ga0068856_1022420871	3300005614	Corn Rhizosphere	MASNAVTASPSREAVRDPVLLLPLAIAGGLAAGWLGVHEGVAGTRIAVDLALSWALIAASLVALERPRWRRTRWLLAATPFALLGADLEWASS
Ga0068852_1001831281	3300005616	Corn Rhizosphere	MASNAVTALPSRAAVRDPVLLLPVAVAAGLAVGWLGVHERAAGTRIAADLTLSWALVTASLIVLERPRWRRARWLLAAAPFALLGSDLEWASSHALWTVGFLLEGLWAAFLVQLVLTFPEGRPWSRPARIALLAAYTITLGGQLAGGLV
Ga0068852_1007000661	3300005616	Corn Rhizosphere	MASNAVTVSPSREAVRDPVLLLPLAVACGLAVGWLGVHEGVAGTRIAVDLALSWALIAASLVALERPRWRRARWLLAASSFALLAADLEWASSDALWTVGFLLEGLWVALLIQLVLT
Ga0075283_10285633	3300005891	Rice Paddy Soil	MASTVARAAPSRNVMRDPVLLLPAAVAAGLAVGWLGVREQVAGTRIAADLVLCWALVAASVVVVERPRWRVKWLLVAASFTLLGADLEWASSR
Ga0066652_1001461861	3300006046	Soil	MTASPAVRVPPRRDLLRDPVLVLPVAVAAGLAVGALGVHQQIAGTRLVADLALAWTLTAAALFVLEQPRWRRARWLLLGTGLAVLAADLQWAGSSALWTLGALLEELWVAALALLVLT
Ga0066658_102315782	3300006794	Soil	MASTAVTASPSRAAIRDPVLLVPLVVAVGLSIGWLGVHERVSGTRVAADLALSWALVAASVVMLERPRWRKSRWLLAATAFALLGADLEWAGPHVVWTLGFVLEGLWAALLLQVVLTFP
Ga0066665_112538691	3300006796	Soil	MASSAVTASTRREVIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWAS
Ga0066659_108107271	3300006797	Soil	MTSAAITASPRRGVLRDPVLLLPVAVAAGLAIGWLGVHEGVPGARVAADLALSWALVAASVVMLERPRWRRASWLLAATAFALLGADLEWASSHALWTLGFVIDGLWAAFLVQLV
Ga0066659_117353662	3300006797	Soil	MASNAGWALPRRDAVRDPVLLLPLAVAAGLAVGWLGVHERVGGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLW
Ga0079221_104847981	3300006804	Agricultural Soil	MASNAVTALPTRDAIRDPVLLMPLAVAAGLAVGWLGVHERVSGTRIAADLALSWALMAASLVVLERPRWRQARWLLAATPFALLGADLEWASSHAVWTLGFLLEGLWAALLVQLVVTFPEGRAWSRPARVAAFAAYTLTFGGQLVGGL
Ga0079221_108717122	3300006804	Agricultural Soil	MAANAVTAVPSRNALRDPVLLLPLAVATGLAVGWLGVHERIAGTRIAADLALSWALIGASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVVTFP
Ga0075428_1025300162	3300006844	Populus Rhizosphere	VLEPVLIADDHPVARSRDLVRDPVLLIPGVVAAGLAIGWLGVQEQVSGTRVAADLALAWALVAASAVAMDRPRWRRARWLLAAGGFALLGADLAWSGSHPLWTLGLLLQ
Ga0075433_106489803	3300006852	Populus Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSRALWTL
Ga0075424_1014346961	3300006904	Populus Rhizosphere	MASASTAVRASPGRGVIRDPVLLMPAAVVAGLAVGWLGINHQVAGTRIAADLALAWALTVASVVVLERPRWRRSRWLLAGTAFAVLAADLEWAGSHVLWTFGFVLEGLWAALVVQLVLTFPEGRMWSRAARVA
Ga0066710_1003018241	3300009012	Grasslands Soil	MASTAVTASPHRDSIRDPVLLLPVVVAAGLAVGWLGVHERVSGTRIVADLALSWALVAASLVVLERPRWRRARLLLAATAFALLGTDLEWASSHALWTLGFVLEAL
Ga0066710_1013602861	3300009012	Grasslands Soil	MTSAAITASPRRGVLRDPVLLLPVAVAAGLAIGWLGVHEGVPGARVAADLALSWALVAASVVMLERPRWRRASWLLAATAFALLGADLEWASSHALWTLGFVIEGLW
Ga0066709_1007533103	3300009137	Grasslands Soil	VLVVPVVVAAGLAVGWLGVHEHVSGTRIATDLALSWALASASLVVLARPRWRRVRFLLAATAFALLGADLEWASSNVLWTLGLLLEGLWAALLVQLVLTFPEGR
Ga0066709_1009775161	3300009137	Grasslands Soil	MASTAVTTAPSRDATRDPVLLLPLVVAAGLAIGWLGIHEHVAGTRIAADLALSWALVAASVVMVERPRWRRARWLLAATAFVLLGADLGWASSHVLWTLGFVLEGLWAAFLVQLVLTFPEGRSWSRLARLAIVGAYAVTFGGQLVGA
Ga0066709_1014112542	3300009137	Grasslands Soil	MASNAVTALPSRDAVRDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALIAASLVVLERPRWRRARWLLAATAFALLGADLEWASSQALWSLGFLLEGLWAAFL
Ga0111538_108295821	3300009156	Populus Rhizosphere	VLEPVLIADDHPVARSRDLVRDPVLLIPGVVAAGLAIGWLGVQEQVSGTRVAADLALAWALVAASAVAMDRPRWRRARWLLAAGGFALLGADLAWSGSHPLWTLGLL
Ga0105237_115129502	3300009545	Corn Rhizosphere	MASNAVTAFPSRDTVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLAATPFALLGADLEWATSHALWTLGFLLEGLWLAFL
Ga0136218_10136741	3300010229	Soil	MASTAVAPHRAVIRDPVLLLPLVVTAGLAVGWLAVREQVSGPRIAADLALAWSLAAASLVVLERPRWRQVRWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRPWSRPARIAVISAYVLTLG
Ga0134063_103430921	3300010335	Grasslands Soil	MASTAVTASPSGDAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMVERPRWRRARLLLAATAFALLGADLEWASSHAL
Ga0120146_10331893	3300011992	Permafrost	MASTAVAPSPGRGVIRDPVLLLPLAVAAGLAVGWLAGRAHVSGPRTAADLALAWGLVMASLVVLERPRWRQVGWLLAATAFALLGADLEWADSQVLWTLGFVIEGLWAAFLAQLVL
Ga0137378_113141622	3300012210	Vadose Zone Soil	MASTAVTASPSRAAIRDPVLLLPLVVAAGLAVGWLGVHERVSGTRIITDLALSWALVAASLVVLERPRWRRASWPLAATAFALLGADREWANSHVLWMLGFVLEG
Ga0137377_108170001	3300012211	Vadose Zone Soil	MALTAVTASPSRAAIRDPVLLLPLIVAAGLAIGWLGVHERVSGTRISADLALSWALTAASVVVLQRPRWHRARWLLAGAAFALLGADLEWASSHALWTLGFLLEGLWAALLVQLVLTFPEGRSWS
Ga0137368_108091081	3300012358	Vadose Zone Soil	MTSTAVTASPSRDVLRDPVLQLPVVVAAGLAVGWLGAHEGISGSRIAADVALSWALVGASLVVLDRPRWRRARLLIAATAFTLLGADLEWARWHALWTLGLLLEA
Ga0164299_102701371	3300012958	Soil	MTSNAVTAWPSRDAARDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRPWSRLAHLTVVSAYTVTLAGQLFCCQ*
Ga0164302_115758311	3300012961	Soil	MASRTITVSPSRDVIRDPVLLLPLVVAAGLAVGWLGVQHQRVSGERVAADLALSWALVGASLALLERPRWRRSRWLLSAAAFALLGADLEWARSHALWTVGFLFAGLWAARLVQLV
Ga0134077_104558751	3300012972	Grasslands Soil	MASTAVTASPSRDAIRDPVLFLPVVVAAGLAVGWLGVHEQVSGTRIIADLALSWALVAASLVVLERSRWRRARLLLVATAFALLGADLEWASSHTLWTVGFVIEGLWAAFLVQLVLTFPEGRPWSRLARITIGGAYAVTLG
Ga0134110_101229292	3300012975	Grasslands Soil	MTSTAVPPPSRDVIRDPLLLLPLIVAAGLAVGWVGVDEQVAGTRITADLALSWALTAASVVVLERPRWRRARWLLAATAFALLGADLEWASSHALWTLGFVLEGVWAAFLVQLVLTFPEG
Ga0134110_106227622	3300012975	Grasslands Soil	MASTAVTASPSGDAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWASSH
Ga0134087_102637742	3300012977	Grasslands Soil	MASNAATALPSRDAVRDPVLLFPLAVAAGLAVGWIGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWRRSWFSSS*
Ga0164307_105019391	3300012987	Soil	MTSTAVTASPSRDVIRDPVLVLPTAVAAGLAVGWLGVQHQVAGTRIAAGLALAWALTVASVVVLERPRWRRARWLLAGTAFAVLGADLEWASSQALWTLGFVLE
Ga0157372_118045991	3300013307	Corn Rhizosphere	MASDAATALPTRDAVRDPVLLLPLVVAAGLAVGRLGVHGRVAGTRIAADLALSWALIAASLVALERPRWRRARWLLAASSFALLAADLQWANSHALWTVGFLLEGLWVALLIQLVLTFPEGRQWSRPAHLTVVS
Ga0134078_106030331	3300014157	Grasslands Soil	MTSTAVTASPSRDLIRDPVLLLPLVVAAGLAVGWLGVHERVSGTRIITDLALSWALVAASLVVLERPRWRRASWPLAATAFALLGADLEWANSHV
Ga0182008_108049592	3300014497	Rhizosphere	MASTVVAPPPSRGVIRDPVLLLPLVVATGLAIGWLAVREQVTGPRIATDLAVAWGLVAVSLLILERPRRRQAGWLLSATAFALLGADLEWTGSHALWTLGFVL
Ga0134072_103799531	3300015357	Grasslands Soil	MASNAVTALPSRDAVRDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALIAASLVVLERPRWRRARWLLAATSFALLGADLEWASSHALW
Ga0184619_100003111	3300018061	Groundwater Sediment	MASTAVTASPSREVARDPVLLLPVVVAGGLAIGWLGVHEQVSGTRIAADLALAWALITASLVVLERPRWRRARWMLAAAAFALLGADLEWSSAHTLWTLGFLLEGFWAAVMVQLVLTFPEGRARSRI
Ga0066655_102311371	3300018431	Grasslands Soil	MASTAVTASPSGDAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWASSHTVWTLGFVLEGLWAAFL
Ga0066667_105963171	3300018433	Grasslands Soil	MASTAVTASPSGDAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWASSHTVWTLGFVLEGL
Ga0066669_101730303	3300018482	Grasslands Soil	MASNAVTALPSRDAVRDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALIAASLVVLERPRWRRARWLLAATSFALLGADLEWASSHALWPLGFLLEGLWAAFLVQLVLTFPEGHPWSRLARIAVLAAYT
Ga0206356_104201031	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MASNAVTVSPSREAVRDPVLLLPLAVACGLAVGWLGVHEGVAGTRIAVDLALSWALIAASLVALERPRWRRARWLLAASSFALLAADLEWASSDALWTV
Ga0206353_106234873	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MASNAVTALPSRAAVRDPVLLLPVAVAAGLAVGWLGVHERAAGTRIAADLTLSWALVTASLIVLERPRWRRARWLLAAAPFALLGSDLEWASSHALWTVGFLLEGLWAAFLVQLVLTFPEGR
Ga0206353_117035582	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTAVESSPSRGVIQDPVLLLPLAVAAGLAVGWLAVRAHVSGPRIAADLALAWGLAAASLVVLERPRWRQAGWLLAATAFALLGADLEWSGSHALWTLGFVLEGLWAAFLVQLVLTFPEGRSWSA
Ga0193699_102331991	3300021363	Soil	MTSAAVTASPRRGVLGDPVLVVPVVVAAGLGVGWLGVHEHISGTRIAADLVLSWALVSASLVVLERPRWRQARLLLAATAFALLGADLAWASSHALWTLG
Ga0247664_11620311	3300024232	Soil	MAPNAVTVSPSREAVRDPVLLFPLAVACGLAVGWLGVHEGVAGTRIAVDLALSWALIAASLVALERPRWRRARWLLAASSFALLAADLEWASSDALWTVGF
Ga0207647_105224932	3300025904	Corn Rhizosphere	MASNAVTVSPSREAVRDPVLLLPLAVACGLAVGWLGVHEGVAGTRIAVDLALSWALIAASLVALERPRWRRARWLLAASSFALLAADLEWASSDALWTVGFLLEGLWVALLIQLVL
Ga0207699_109044421	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MASNALTALPSRDAFRDPVLLLPIAVAAGLAVGWLGVHKHVAGTRIAADLAVSWALVAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTFGFLL
Ga0207654_105460471	3300025911	Corn Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGCLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSRALWTLGFV
Ga0207707_103276273	3300025912	Corn Rhizosphere	MASGAVTALPTPDARRDPVLLLPLAVATGLAVGWLGVHERIAGTRIAADLALSWALIGASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVVTFPEGRPWSRPARVAV
Ga0207649_102681303	3300025920	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLASTPFALLGADLEWATSHALWTLGFLLEGLWLAFLVQLVLTFPEGRPWSHLSRIAVVA
Ga0207649_114131092	3300025920	Corn Rhizosphere	MASTVVAPPPRRGVIRDPVLLLPLAVAAGLAVGWLAVREQVSGPRIAADLALAWGLAAASLVVLERPRWRQAGWLLAATAFALLAADLEWATSHVLWTLGFVLEGL
Ga0207646_106769322	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGVDLEW
Ga0207694_111307102	3300025924	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLAATPFALLGADLEWATS
Ga0207700_114691141	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLLLPLAVAAGLAVGWLGVHEQVAGTRVAADLALSWALLAASLVVLERPRWRRARWLLAATSFALLGADLEWASSHALWTLGFLLEGLCAAFLVQLVLTFPEGRPWSRLARITIL
Ga0207664_100756563	3300025929	Agricultural Soil	MASGAVTALPTPDARHDPVLLLPLAVATGLAVGWLGVHERIAGTRIVADLALSWALIGASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVVT
Ga0207644_106627622	3300025931	Switchgrass Rhizosphere	MTSTAVTASPSRDVIRDPVLVLPTAVAAGLAVGWLGVQHQVAGTRIAAGLALAWALTVASVVVLERPRWRRARWLLAGTAFAVLGADLEWASSQALWTLGFVLEGLWAALVVHLVLTFPE
Ga0207706_114882401	3300025933	Corn Rhizosphere	MTSTAVSASPSRDVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSHALWTLGFVLEGVWVALLVQLVLTFPEGRSWSRLARAAIVGAYAVTF
Ga0207709_107745211	3300025935	Miscanthus Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSHAL
Ga0207669_106190171	3300025937	Miscanthus Rhizosphere	MTSTAVSASPSREVTRDPVLLLPLVVAAGLAVGWLGVDHQAAGSRIAADLTLAWALTAASVVVLLERPRWQRARWLLAATAFAVLGADLEWATSHALWTLGFVLEGVWVALLVQLVLTFPEGRSWS
Ga0207665_116899212	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MASNAATALPSRDAVRDPVLLFPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTFGFLLEGLWAAFLVQLVVTFP
Ga0207640_101992561	3300025981	Corn Rhizosphere	MASNAVTALPSRAAVRDPVLLLPVAVAAGLAVGWLGVHERAAGTRIAADLTLSWALVTASLIVLERPRWRRARWLLAAAPFALLGSDLEWASSHALW
Ga0207702_112597482	3300026078	Corn Rhizosphere	MASNAVTALPSRAAVRDPVLLLPLAVAAGLAVGWLGMHEHVAGKRIAADLALSRALIAASLVVLERPRWRRARWLLAATPFVLLGADLEWASSHALWTFGFLLEGLWVALLVQLVVTFPEGRPWSRPARFVILAAYTLTLGG
Ga0207698_107898663	3300026142	Corn Rhizosphere	MASNAVTAFPSRDAVRDPVLLLPLAVTAGLAVGSLGVHEHVAGTRIAADLALSWALMAASLVVLERPRWRRARRLLASTPFALLGADLEWATSHALWTLGFLLEGLWLA
Ga0207698_122131261	3300026142	Corn Rhizosphere	MASNAVTALPSRAAVRDPVLLLPVAVAAGLAVGWLGVHERAAGTRIAADLTLSWALVTASLIVLERPRWRRARWLLAAAPFALLGSDLEWASSHALWTVGFLLEGLWAAFLVQLVLTFPEGRPWSRPARIAVITAYTLT
Ga0209238_11082981	3300026301	Grasslands Soil	MASTAVTASPSRAAIRDPVLLVPLVVAVGLSIGWLGVHERVSGTRVAADLALSWALVAASVVMLERPRWRKTRWLLAATAFALLGADLEWAGPHVVWTLGFVLEGLWAALLLQVVLTFPEGRPWSR
Ga0209688_10158763	3300026305	Soil	MTSAAITASPRRGVLRDPVLLLPVAVAAGLAIGWLGVHEGVPGARVAADLALSWALVAASVVMLERPRWRRASWLLAATAFALLGADLEWASSHALWTLGFVIEGLWAAFLVQLVLTFPEGRPWSRAAR
Ga0209059_13494231	3300026527	Soil	MASTAVTASPGRAAIRDPVLLVPLVVAVGLSIGWLGVHERVSGTRVAADLALSWALVAASVVMLERPRWRKTRWLLAATAFALLGADLEWAGPHVVWTLGFVLEGLWAALLLQVVLTFPEGRPWSRIARVAIVCAYAGTFGGQLV
Ga0209056_106254341	3300026538	Soil	MASTAVTASPSGDAIRDPVLLVPLVVAAGLAIGGLGVHERVSGTRIATDLALSWALVAASVVMLERPRWRRARWLLAATAFALLGADLEWASSHTVWTLGFVLEGLWAAFLVHLVLTFPEGRSWSRVAGVAIAGAYAVTFGWQLVG
Ga0209811_101019653	3300027821	Surface Soil	MTSTAVSTAPPQPGVLRDPVLLVPLVVAAGLAIGWLGVDEGVAGARVAADLALAWALVGASVVVLERPRWRPARLLLATAALAVLVGDLVWSQRPALWTLGWLFAA
Ga0307284_101757541	3300028799	Soil	MTSAAVTASSRRGVLGDPVLVVPVVVAAGLGVGWLGVHEHISGTRIAADLALSWALVSGSVVVLERPRWRRVRLLLAATAFALLGADLEWASSHALWTLGLLLEGLWAAFLV
Ga0307308_105866262	3300028884	Soil	MTSAAVTASSRRGVLGDPVLVVPVVVAAGLGVGWLGVHEHISGTRIAADLALSWALVSASLIVLERPRWRRVRLLLATTAFALLGADLEWANSHA
Ga0307500_101222932	3300031198	Soil	VLRDPVLLLPVVVAGGLAVGGLGVHEQVAGTRLIADLALSWALAAAAIVVLKRPRWHRASWLLAATAFAVLGADLEWANSNALWTLGFLLEGLWVA
Ga0310813_104310921	3300031716	Soil	MASTVVAPPPRRGVIRDPVLLLPLTVAAGLAVGWLAVREQVSGPRIAADLALAWGLAAASLVVLERPRWRQAGWLLAATAFALLAADLEWATSHVLWTLGFVLAGLWAAFLVQLVLTFPEGRPWSGVARVAMVAAYAVTLGGQ
Ga0310813_120039691	3300031716	Soil	MAANAVTALPRRDAIRDPVLLLPLAVAAGLAVGWLGVHEHVAGTRIAADLALSWALMAASLIVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLLQLVLTFPEGRPWSRLARI
Ga0308175_1017074532	3300031938	Soil	MASNSVTALPRRGAVRDPVLLLPLAVATGLAVGWLGVPDQVAGTRVAADLPLSWALLAASLVVLERPRWRRARWLLAATPFVLLGADLEWASSHALWTLGFLLEGLCAAFLVQLVLTFPEGRPWSRLARIAILVAYTLTLG
Ga0308175_1024428212	3300031938	Soil	MTSAAFTASTRRDLVRDPVSLLPVVVAAGLAVGWLAVQKQVAGTRMATDLALAWALTAASLVVLERPRWRKSGWLLAATGFALLAADLEWATSHVLWTLGFVLEGLWAGFLVQLVLTFPEGRSWSGVGRIAIVGAYTVTLGGQLVAAF
Ga0308175_1024714572	3300031938	Soil	MASNSVTALPSRDAVRDPVLLLPLAVTAGLAVGWLGVHERVAGTRIAADLALSWALTAASLVVLERPRWRRARWLLASTPFALLGADLEWTSPHG
Ga0308174_108883681	3300031939	Soil	MASNAVTALPRRGAVRDPVLLLPPAVATGLAVGWLGVPDQVAGTRVAADLALSWALLAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLCAAFLVQLVLTFPEGRPWSRLARIAILVAYTLTL
Ga0307471_1025262201	3300032180	Hardwood Forest Soil	MASNAVTALPSRDAVRDPVLLLPLAVAAGLAVGWLGVHERVAGTRIAADLALSWALMAASLVVLERPRWRRARWLLAATPFALLGADLEWASSHALWTLGFLLEGLWAAFLVQLVLTFPEGRPWS
Ga0335081_124793641	3300032892	Soil	MTSTAVTASPRWAVVRDPVLLLPLVVAVGLAVGWLGVDNQVAGTRIATDLALSWAMVAASLVVLERPRWRRARWLLAASAFAVLGADLEWASSRALWTLGFLLAGTWAAILAQLVLTFPEGR
Ga0335077_113098762	3300033158	Soil	MTSTAVTASPRWAVVRDPVLLLPLVVAVGLAVGWLGVDNQVAGTRIATDLALSWAMVAASLVVLERPRWRRARWLLAASAFAVLGADLEWASSRALWTLGFLLAGTWAAILAQLVLTFPEGRSWSRVAPAVFLGAYIMTFGGQ
Ga0310810_103140653	3300033412	Soil	MASNAVTALPSRAAVRDPVLLLPVAVAAGLAVGWLGVHERAAGTRIAADLTLSWALVTASLIVLERPRWRRARWLLAAAPFALLGSDLEWASSHALWTVGFLLEGLWAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095242

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences