NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095241

Metagenome Family F095241

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095241
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 62 residues
Representative Sequence MTQSTDEFRPETLVAIDAVKRALTIARRGVGAEHITAKGGRDLVTVTDVAVEDAVRGMV
Number of Associated Samples 97
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 83.84 %
% of genes near scaffold ends (potentially truncated) 83.81 %
% of genes from short scaffolds (< 2000 bps) 82.86 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (81.905 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(16.191 % of family members)
Environment Ontology (ENVO) Unclassified
(38.095 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.810 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.
1ICChiseqgaiiDRAFT_22166121
2Ga0055432_101777872
3Ga0062389_1037640102
4Ga0062593_1015576512
5Ga0062590_1008499422
6Ga0066679_105139961
7Ga0066678_103876001
8Ga0070669_1012163762
9Ga0070703_101668992
10Ga0066686_105655521
11Ga0066681_102167732
12Ga0070698_1009256223
13Ga0070698_1014056802
14Ga0070697_1001485893
15Ga0070695_1007537462
16Ga0070704_1012599382
17Ga0066701_100734843
18Ga0066695_103273552
19Ga0070702_1018119161
20Ga0068860_1000473534
21Ga0068860_1025047162
22Ga0066658_103188011
23Ga0075434_1010516352
24Ga0075434_1022483592
25Ga0079215_107619781
26Ga0079218_121308292
27Ga0075435_1009501443
28Ga0099791_103554991
29Ga0099829_108792311
30Ga0111538_119748552
31Ga0105241_103271693
32Ga0105248_132400991
33Ga0105249_103238922
34Ga0126384_101126501
35Ga0126384_104252111
36Ga0134062_102751271
37Ga0134124_114844292
38Ga0134124_119654301
39Ga0137392_100631131
40Ga0137338_10099871
41Ga0137363_116110781
42Ga0137381_109272881
43Ga0137376_109011482
44Ga0137379_107117562
45Ga0137369_104824842
46Ga0137361_118806371
47Ga0137318_10325541
48Ga0137396_100955481
49Ga0137394_104826162
50Ga0137404_119364881
51Ga0137407_100545944
52Ga0134110_105097763
53Ga0134076_100049045
54Ga0157375_129111762
55Ga0134078_103913942
56Ga0163163_123616962
57Ga0180104_11634413
58Ga0157379_122218051
59Ga0173480_106338592
60Ga0180085_10211741
61Ga0134112_100477373
62Ga0190266_107745662
63Ga0184638_12210441
64Ga0184626_101600881
65Ga0184637_103925911
66Ga0184609_105811582
67Ga0184639_102146542
68Ga0190265_104619081
69Ga0190271_102639185
70Ga0066669_115136322
71Ga0193707_10071284
72Ga0193725_11304302
73Ga0206224_10052712
74Ga0210382_103420571
75Ga0210379_101662381
76Ga0222623_102046911
77Ga0207650_102874982
78Ga0207712_102412982
79Ga0207640_101469221
80Ga0207648_109402302
81Ga0209235_11215063
82Ga0209238_10109271
83Ga0257162_10172251
84Ga0209057_10743171
85Ga0257170_10040591
86Ga0257180_10040052
87Ga0257173_10028271
88Ga0257167_10303811
89Ga0257178_10317122
90Ga0257181_10000111
91Ga0209807_12944992
92Ga0209058_10497095
93Ga0209056_100834974
94Ga0209180_100590833
95Ga0209180_105865681
96Ga0209283_102263302
97Ga0209283_108213632
98Ga0209853_11761691
99Ga0268264_120487992
100Ga0268264_125280031
101Ga0255310_100192121
102Ga0307469_110792221
103Ga0214473_116958961
104Ga0315275_127392542
105Ga0335085_111419052
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.83%    β-sheet: 0.00%    Coil/Unstructured: 55.17%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

510152025303540455055MTQSTDEFRPETLVAIDAVKRALTIARRGVGAEHITAKGGRDLVTVTDVAVEDAVRGMVSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
81.9%18.1%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds



Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Sediment
Bog Forest Soil
Natural And Restored Wetlands
Soil
Groundwater Sediment
Groundwater Sediment
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Soil
Agricultural Soil
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Groundwater Sand
Sandy Soil
Deep Subsurface Sediment
Corn Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Populus Rhizosphere
Switchgrass Rhizosphere
Corn Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Switchgrass Rhizosphere
3.8%4.8%5.7%16.2%4.8%11.4%2.9%6.7%6.7%3.8%3.8%2.9%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_221661213300000033SoilVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR*
Ga0055432_1017778723300004022Natural And Restored WetlandsMTESADQFRPETLVAIEAVERALSITRRGVGAENVSEKGHRDLVTVTDVAVEDAVRSILA
Ga0062389_10376401023300004092Bog Forest SoilMMLSPDEFRPETLLAIDTVESALVIARCGIGAQHIAAKGERDLVTATDLAI
Ga0062593_10155765123300004114SoilMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR*
Ga0062590_10084994223300004157SoilMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR*
Ga0066679_1051399613300005176SoilMTWSADEFRPVSLVAIGAVEQALDLARRRVGAADITAKDGRDLVTATDVAVED
Ga0066678_1038760013300005181SoilMTQSTDQFRLETLVLIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAV
Ga0070669_10121637623300005353Switchgrass RhizosphereMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR*
Ga0070703_1016689923300005406Corn, Switchgrass And Miscanthus RhizosphereMTSFAEGFRRETVVAMGAVERALELARGGVGAKEITSKGARDVVTATDVAVEDAVRGIVHDAL
Ga0066686_1056555213300005446SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEAL
Ga0066681_1021677323300005451SoilMTRPTDGFRPETLVAIDAVERALELARHRVGAGDITAKDGRDLVTATDVAVEDAVRGIVR
Ga0070698_10092562233300005471Corn, Switchgrass And Miscanthus RhizosphereMTESGDPFRPETLVAIEAVMRALTIAQRGVGADEVTAKSGRDLVTAADVAIEDAVRRMVADALSFSVIGEE
Ga0070698_10140568023300005471Corn, Switchgrass And Miscanthus RhizosphereMRQSAGEFRPETLVAVEAVNQALRIARRGVESQAITVKDGRDLVTVRDVA
Ga0070697_10014858933300005536Corn, Switchgrass And Miscanthus RhizosphereMTSSGAGFRSVTLVAIGAAERGLELARRRVGAADITAKEGRDLVTATDVAVE
Ga0070695_10075374623300005545Corn, Switchgrass And Miscanthus RhizosphereMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDA
Ga0070704_10125993823300005549Corn, Switchgrass And Miscanthus RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLRDSELCSGNPAVLREPGARGG*
Ga0066701_1007348433300005552SoilMTDPAAQFRPETLVANEAVTRALTIAQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDALAFSVIGEERG
Ga0066695_1032735523300005553SoilMTRLFRRETQVAVDTVTQALDLARRRVGADEIASKGGRDLVTATD
Ga0070702_10181191613300005615Corn, Switchgrass And Miscanthus RhizosphereSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR*
Ga0068860_10004735343300005843Switchgrass RhizosphereMTQSTDEFRRETRVAIDAVKRSLSIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR*
Ga0068860_10250471623300005843Switchgrass RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVAVEDAV
Ga0066658_1031880113300006794SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRLERNAEG
Ga0075434_10105163523300006871Populus RhizosphereMTRTTDGFRPETLVAIDAVERALELARHRVGAADITAKDGRDLVTATDVAVEDA
Ga0075434_10224835923300006871Populus RhizosphereMTDPAAQFRPETLVAIEAVSRALTIAQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDA
Ga0079215_1076197813300006894Agricultural SoilMTQAADRFRPEALVAIDAVRRALAIARRGIGARDITGKGGRDLVTATDVAVEDAVRGTVSDALGFPVVGEERG
Ga0079218_1213082923300007004Agricultural SoilMTQSTDEFRPETLVAIDAVKRALTIARRGVGAEHITAKGGRDLVTVTDVAVEDAVRGMV
Ga0075435_10095014433300007076Populus RhizosphereMSALRAETLRAIDAVARALDLAERRTGSSDVTSKGGRDVVTATDVLVEEALR
Ga0099791_1035549913300007255Vadose Zone SoilMTSAFRPKTLVAVDAVGWALELARRRAGAEEITSKGARDVV
Ga0099829_1087923113300009038Vadose Zone SoilMTRSADEFRPVTRVAIDAVEQALELAQGRVGAADITAK
Ga0111538_1197485523300009156Populus RhizosphereVSAGPFRRETLVAVDAVQRGLAIAGRGVGAEAVASKGGRDIVTAADVAVEDAVR
Ga0105241_1032716933300009174Corn RhizosphereMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALQPMRWASR*
Ga0105248_1324009913300009177Switchgrass RhizosphereMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVRGIAADALGFSVIG
Ga0105249_1032389223300009553Switchgrass RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGEASVSRSGA
Ga0126384_1011265013300010046Tropical Forest SoilVGPRVVDFRPETLVAIDTVERALALARQGGGAGKITSKGGRDIVTAADVAV
Ga0126384_1042521113300010046Tropical Forest SoilMTSSFREVRPETGVAIGAVEQALEIARRRVGAADITAKEGRDLVTATDVAVEDAVRTIVR
Ga0134062_1027512713300010337Grasslands SoilVTESGRPFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRNMVADAL
Ga0134124_1148442923300010397Terrestrial SoilMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALWPMRWASR*
Ga0134124_1196543013300010397Terrestrial SoilMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALED
Ga0137392_1006311313300011269Vadose Zone SoilMTSSAAELRPVTLVAIGAVERALELARRRVGPADITAKEGRDLVTAT
Ga0137338_100998713300012174SoilMPQSADEFRPETLVAVDAVKRALTIARRSGESEAITVKDGRDLVTARDVAVEDAIRGMVADALGFSVVG
Ga0137363_1161107813300012202Vadose Zone SoilMTEFTRPFRPETVVAIEAVRRALTIALRDVGGREVTTKGGRDLVTAADVAVENAVRSMMADALSFPVVGEER
Ga0137381_1092728813300012207Vadose Zone SoilMTSFAEGFRRETVVAMGAVERALELARRGVGAKDISSKGARDVVTATDVAVEDAVRGI
Ga0137376_1090114823300012208Vadose Zone SoilMTDPAAQFRPETLVAIEAVKRSLTIVQPGVSTEDITAKGGRDLVTVVDVAVEDTVRGIVTDALGFSVIGEERGGEAADD
Ga0137379_1071175623300012209Vadose Zone SoilMTGAFRSETLVAVDAVRQALELARRRVGAEEITSKGGRDVVTATDVAV
Ga0137369_1048248423300012355Vadose Zone SoilMTGAFRSETLVAVDAVRQALELARRRVGAEEITSKGGRDVVTATDVAVEDAVR
Ga0137361_1188063713300012362Vadose Zone SoilMTRPTDGFRPETLVAIDAVERALELARHRVGAADITAKDGRDLVTATDVAVEDAIRGIV
Ga0137318_103255413300012671SoilMTGSADFRPETLVALDAVTRALTIARRGVGAADVTEKDGRDIVTVADFAVE
Ga0137396_1009554813300012918Vadose Zone SoilVAFGAMTESGRQFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVAD
Ga0137394_1048261623300012922Vadose Zone SoilMALRARKGNQFRSETLVAIDAVKHALTIARRGVNAEDVAEKDGRDIVTVADIAVEDAVRSIVAGALDFPVVGEERGG
Ga0137404_1193648813300012929Vadose Zone SoilMTQSTDGFRAETFVAIDAVKRAITTARRGVGTRDITAKGERDLVTATDVAVEDAVRGTMADVLGFSV
Ga0137407_1005459443300012930Vadose Zone SoilLTLSTDEFRPETLVAIDAVKRALTIARQGVGAADSTAKGGRDLVTATDLAVEDAVRGI
Ga0134110_1050977633300012975Grasslands SoilMTQSADEFRPETRVAIDAVKHALTIARRGVGTEDITHKGGRDLVTVTDIAVEDAVRRIVAET
Ga0134076_1000490453300012976Grasslands SoilVTESGRPFRPETVVAIEAVKRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVADALSFSVVGEERGGKASA
Ga0157375_1291117623300013308Miscanthus RhizosphereAMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR*
Ga0134078_1039139423300014157Grasslands SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAA
Ga0163163_1236169623300014325Switchgrass RhizosphereMTLSADELRPETLVAIDAVKRGLAIARRGLGADDITAKGGRDLVTVADVAVEDAVRGIV
Ga0180104_116344133300014884SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESEDITVKDGRDLVTVSDVAVEDAIRGMVAYALGFSVVGEERGGEAAA
Ga0157379_1222180513300014968Switchgrass RhizosphereMTLSADELRPETLVAIDAVKRGLAIARCGLGADDITAKGGRDLVTVADVAVEDAVRGIVADALGVSV
Ga0173480_1063385923300015200SoilMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALQPMRWASR*
Ga0180085_102117413300015259SoilMPQSADELRPETLVAVDAVKRALTIARRSGESEAITVKDGRDLVTARDVAVEDAIRGMVADALGFSVVGEERGGEA
Ga0134112_1004773733300017656Grasslands SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRLERNAEGA
Ga0190266_1077456623300017965SoilMDRATEDIRPATRVAIFAVRRGLELARGRVGAEEITSKGGRDLVTATDIAVEDEIRRIVE
Ga0184638_122104413300018052Groundwater SedimentMNPAIEDIRPATRVAIRAVRRGLELARGRVGADVITSKGGRDLVTATDIAVED
Ga0184626_1016008813300018053Groundwater SedimentMLTESADQLRPETLVALEAVKRALTIARRGVGAADVTNKDGRDIVTVADIAVEDAVRSIV
Ga0184637_1039259113300018063Groundwater SedimentMRKGPTATDGFRPETLKAVEVVERALGLTRRDVVAGDIASKGGRDVVTATDVAVEDAVRE
Ga0184609_1058115823300018076Groundwater SedimentMPQSVDEFRPETLVAVDAVKRALTIARRSVESEDITVKDGRDLVTERDVAVEDAIRGMVADALGFSVV
Ga0184639_1021465423300018082Groundwater SedimentMLTESADFRPETLVALEAVKRALTIARRGVAAADVTNKDGRDIVTVADIAVE
Ga0190265_1046190813300018422SoilMTEPAEPFRTETLVGIEAVERALTIARRGVGAADIREKGQRDLVTVADIAVEDAVRGILTEAIRLP
Ga0190271_1026391853300018481SoilMDRAIEDVRPATRVALRAVRRGLELARSRVGAGEITSKGGRDLVTATDIAVE
Ga0066669_1151363223300018482Grasslands SoilMTRPTDQFRPETLVAIDAVKRALAIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAAL
Ga0193707_100712843300019881SoilMPQSAGEFRPETLVAVKAVNQALRVARRSVESQGITVKDGRDLVTVRDVAVEDAIRGMVVDALGFPVV
Ga0193725_113043023300019883SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESEDITVKDGRDLVTVRDVAV
Ga0206224_100527123300021051Deep Subsurface SedimentMPQSADEFRPETLVAVDAVKRALTIARRSVESEDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGEERG
Ga0210382_1034205713300021080Groundwater SedimentMHVAGTRPETLVAIDAVERGLELARSRVGAGDVTSKGGRDLVTATDI
Ga0210379_1016623813300021081Groundwater SedimentMTGSADFRPETLVALEAVKRALTIARRGVDADDVTAKDGRDIVTVADIAVEDA
Ga0222623_1020469113300022694Groundwater SedimentMLTESADQLRPETLVALEAVKRALTIARRGVGAADVTAKDGRDIVTVADIAVEDAVRGIVADALGFPVVG
Ga0207650_1028749823300025925Switchgrass RhizosphereVSAGPFRPETLVAVDAVQRGLAIAGRGVGAEAVASKGGRDIVTVADVAVEDAVRG
Ga0207712_1024129823300025961Switchgrass RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLR
Ga0207640_1014692213300025981Corn RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAADALGFSVIGEERGGERRPPARRSHLRDS
Ga0207648_1094023023300026089Miscanthus RhizosphereMTQSTDEFRRETRVAIDAVTRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR
Ga0209235_112150633300026296Grasslands SoilMTESGRPFRPETVVAIEAVNRALTIAQHGVGAGEVTAKGGRDLVTVADVAVEDAVRSMVADA
Ga0209238_101092713300026301Grasslands SoilVATDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALGT
Ga0257162_101722513300026340SoilMTSSAAELRPVTLVAIGAVERALELARRRVGAADITAKEGRDLVTATDVAV
Ga0209057_107431713300026342SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPG
Ga0257170_100405913300026351SoilMPQSADEFRPETLVAVNAVKRALTIARGSVESGDITVKDGRDLVTVRDVAVEDAI
Ga0257180_100400523300026354SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRG
Ga0257173_100282713300026360SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGEERGGEA
Ga0257167_103038113300026376SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGFSVVGE
Ga0257178_103171223300026446SoilMTSSGAGFRSVTLVAIGAAERGLELARRRVGAADITAKEG
Ga0257181_100001113300026499SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDAIRGMVADALGF
Ga0209807_129449923300026530SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITTKGGRDLVTVTDVAIEDAVRGIVAEALGTECAPSDH
Ga0209058_104970953300026536SoilMTQSTDQFRLETLVVIDAVKRAVTIARRGVGAEDITAKGGRDLVTVTDVAVEDAVRGIVAEALVTECAPSRRSPGAALHQTRL
Ga0209056_1008349743300026538SoilMTDPAAQFRPETLVAIEAVTRALTIAQPGVSSEDITAKGGRDLVTVVDVAVE
Ga0209180_1005908333300027846Vadose Zone SoilMTRSAEFRPETLVAIDAVERALELARRRVGAADITAKDGRDLVTATDVAVEDAVR
Ga0209180_1058656813300027846Vadose Zone SoilMTSSAAELRPVTLVAIGAVERALELARRRVGAADITAKEGRDLVTAT
Ga0209283_1022633023300027875Vadose Zone SoilMPQSADEFRPETLVAVNAVKRALTIARRSVESGDITVKDGRDLVTVRDVAVEDA
Ga0209283_1082136323300027875Vadose Zone SoilMMRSADEFRPVTLVAIGAVEQALELARRRVGAADITAKGGRDLVTAT
Ga0209853_117616913300027961Groundwater SandLTESTDEFRPETLVAIEAVKRAFTIARRGIAAEDVTAKGARDLVTATDVAVEDAVRGVVADAL
Ga0268264_1204879923300028381Switchgrass RhizosphereMTQPPDEFRPETVVAIDAVTRALAIARRRIGAEDITAKGGRDLVTVTDVALEDAVLGIAA
Ga0268264_1252800313300028381Switchgrass RhizosphereMTQSTDEFRRETRVAIDAVKRALAIARRGIGAGDITAKGGRDLVTVTDVAVEDAVEALRPMRWASR
(restricted) Ga0255310_1001921213300031197Sandy SoilMTRSDEFRSQTLVAIDAVERALELARRRVGAADITAKGGRDLVTATDVAVEDAVRAI
Ga0307469_1107922213300031720Hardwood Forest SoilMTPSTDEFRPETLVAIDAVKRGLAIARRRIGAEDVTSKGGRDLVTVTDVAVEDAVRGAVADALGFSVIGEE
Ga0214473_1169589613300031949SoilMTGSADFRPETLVALDAVTRALAIARRGVGAEDVTAKDGRDIVTVADFAVEDAVRSSVADALGF
Ga0315275_1273925423300032401SedimentMTQSTDGFRPETLVAIDAVERALDVARRRVGAEDITSKDARDVVTATDVAVEDAVR
Ga0335085_1114190523300032770SoilVGDEPAVPPTHEFRSETVAASEAVERGLDLARSRAGAADITTKGDRDLVTATDVAVED


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.