Metagenome / Metatranscriptome Family F095237

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095237
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	45 residues
Representative Sequence	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKT
Number of Associated Samples	90
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	44.76 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (100.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (37.143 % of family members)
Environment Ontology (ENVO)	Unclassified (74.286 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.190 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 34.88% Coil/Unstructured: 65.12%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07681	DoxX	13.33
PF00355	Rieske	6.67
PF01154	HMG_CoA_synt_N	1.90
PF01656	CbiA	0.95
PF01253	SUI1	0.95
PF03952	Enolase_N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	13.33
COG4270	Uncharacterized membrane protein	Function unknown [S]	13.33
COG3425	3-hydroxy-3-methylglutaryl CoA synthase	Lipid transport and metabolism [I]	1.90
COG0023	Translation initiation factor 1 (eIF-1/SUI1)	Translation, ribosomal structure and biogenesis [J]	0.95
COG0148	Enolase	Carbohydrate transport and metabolism [G]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	33.33 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	7.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	24.76 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	8.57 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	7.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	24.76 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	8.57 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	7.62 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	24.76 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	8.57 %
archaeon 13_1_20CM_2_51_12	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	7.62 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1085558	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300002560\|JGI25383J37093_10090504	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	910	Open in IMG/M
3300002561\|JGI25384J37096_10054181	All Organisms → cellular organisms → Archaea	1515	Open in IMG/M
3300002908\|JGI25382J43887_10229256	All Organisms → cellular organisms → Archaea	870	Open in IMG/M
3300002912\|JGI25386J43895_10115135	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	668	Open in IMG/M
3300005167\|Ga0066672_10176996	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1350	Open in IMG/M
3300005174\|Ga0066680_10181959	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1324	Open in IMG/M
3300005176\|Ga0066679_10110213	All Organisms → cellular organisms → Archaea	1684	Open in IMG/M
3300005176\|Ga0066679_10241575	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1161	Open in IMG/M
3300005176\|Ga0066679_10691269	All Organisms → cellular organisms → Archaea	662	Open in IMG/M
3300005187\|Ga0066675_10341075	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1094	Open in IMG/M
3300005187\|Ga0066675_10938657	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	652	Open in IMG/M
3300005445\|Ga0070708_101398266	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	653	Open in IMG/M
3300005446\|Ga0066686_10090034	All Organisms → cellular organisms → Archaea	1959	Open in IMG/M
3300005447\|Ga0066689_10993718	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300005451\|Ga0066681_10011825	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4268	Open in IMG/M
3300005468\|Ga0070707_100666167	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1003	Open in IMG/M
3300005540\|Ga0066697_10265843	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1014	Open in IMG/M
3300005552\|Ga0066701_10096460	All Organisms → cellular organisms → Archaea	1720	Open in IMG/M
3300005556\|Ga0066707_10409527	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	882	Open in IMG/M
3300005557\|Ga0066704_10142617	All Organisms → cellular organisms → Archaea	1602	Open in IMG/M
3300005568\|Ga0066703_10191353	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1239	Open in IMG/M
3300006031\|Ga0066651_10002141	All Organisms → cellular organisms → Archaea	7016	Open in IMG/M
3300006794\|Ga0066658_10511287	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	654	Open in IMG/M
3300006796\|Ga0066665_10611558	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	874	Open in IMG/M
3300006797\|Ga0066659_10143792	All Organisms → cellular organisms → Archaea	1687	Open in IMG/M
3300006804\|Ga0079221_11617242	All Organisms → cellular organisms → Archaea	525	Open in IMG/M
3300009012\|Ga0066710_102314777	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	781	Open in IMG/M
3300009012\|Ga0066710_102503355	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	746	Open in IMG/M
3300009089\|Ga0099828_10507107	All Organisms → cellular organisms → Archaea	1088	Open in IMG/M
3300009090\|Ga0099827_10179100	All Organisms → cellular organisms → Archaea	1752	Open in IMG/M
3300009090\|Ga0099827_11157687	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	672	Open in IMG/M
3300009137\|Ga0066709_101402639	All Organisms → cellular organisms → Archaea	1016	Open in IMG/M
3300010075\|Ga0127434_162705	All Organisms → cellular organisms → Archaea	1408	Open in IMG/M
3300010083\|Ga0127478_1004481	All Organisms → cellular organisms → Archaea	753	Open in IMG/M
3300010091\|Ga0127485_1004504	All Organisms → cellular organisms → Archaea	608	Open in IMG/M
3300010101\|Ga0127481_1098636	All Organisms → cellular organisms → Archaea	827	Open in IMG/M
3300010103\|Ga0127500_1016519	All Organisms → cellular organisms → Archaea	528	Open in IMG/M
3300010104\|Ga0127446_1065783	All Organisms → cellular organisms → Archaea	724	Open in IMG/M
3300010107\|Ga0127494_1139563	All Organisms → cellular organisms → Archaea	582	Open in IMG/M
3300010109\|Ga0127497_1098023	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300010114\|Ga0127460_1112270	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	669	Open in IMG/M
3300010117\|Ga0127449_1110448	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300010120\|Ga0127451_1151860	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300010122\|Ga0127488_1145999	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300010125\|Ga0127443_1037666	All Organisms → cellular organisms → Archaea	622	Open in IMG/M
3300010133\|Ga0127459_1039348	All Organisms → cellular organisms → Archaea	859	Open in IMG/M
3300010134\|Ga0127484_1156681	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	885	Open in IMG/M
3300010136\|Ga0127447_1156691	All Organisms → cellular organisms → Archaea	1391	Open in IMG/M
3300010140\|Ga0127456_1225152	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300010142\|Ga0127483_1074453	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	784	Open in IMG/M
3300010304\|Ga0134088_10229174	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	892	Open in IMG/M
3300010304\|Ga0134088_10247277	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	858	Open in IMG/M
3300010326\|Ga0134065_10143094	All Organisms → cellular organisms → Archaea	829	Open in IMG/M
3300010336\|Ga0134071_10296499	All Organisms → cellular organisms → Archaea	811	Open in IMG/M
3300010366\|Ga0126379_10102947	All Organisms → cellular organisms → Archaea	2546	Open in IMG/M
3300012189\|Ga0137388_11551171	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	599	Open in IMG/M
3300012199\|Ga0137383_11149709	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	560	Open in IMG/M
3300012199\|Ga0137383_11197324	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300012206\|Ga0137380_10139396	All Organisms → cellular organisms → Archaea	2212	Open in IMG/M
3300012206\|Ga0137380_10485979	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1089	Open in IMG/M
3300012208\|Ga0137376_10584622	All Organisms → cellular organisms → Archaea	967	Open in IMG/M
3300012209\|Ga0137379_11361184	All Organisms → cellular organisms → Archaea	614	Open in IMG/M
3300012224\|Ga0134028_1271571	All Organisms → cellular organisms → Archaea	881	Open in IMG/M
3300012349\|Ga0137387_10150581	All Organisms → cellular organisms → Archaea	1656	Open in IMG/M
3300012349\|Ga0137387_10171466	All Organisms → cellular organisms → Archaea	1552	Open in IMG/M
3300012351\|Ga0137386_10042163	All Organisms → cellular organisms → Archaea	3134	Open in IMG/M
3300012351\|Ga0137386_10701748	All Organisms → cellular organisms → Archaea	727	Open in IMG/M
3300012351\|Ga0137386_11215163	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	527	Open in IMG/M
3300012357\|Ga0137384_10841802	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	741	Open in IMG/M
3300012361\|Ga0137360_11220239	All Organisms → cellular organisms → Archaea	650	Open in IMG/M
3300012362\|Ga0137361_10968055	All Organisms → cellular organisms → Archaea	770	Open in IMG/M
3300012373\|Ga0134042_1110721	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	754	Open in IMG/M
3300012379\|Ga0134058_1172954	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	947	Open in IMG/M
3300012392\|Ga0134043_1080876	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	631	Open in IMG/M
3300012397\|Ga0134056_1353625	All Organisms → cellular organisms → Archaea	1370	Open in IMG/M
3300012397\|Ga0134056_1355239	All Organisms → cellular organisms → Archaea	700	Open in IMG/M
3300012398\|Ga0134051_1223458	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1137	Open in IMG/M
3300012401\|Ga0134055_1050647	All Organisms → cellular organisms → Archaea	731	Open in IMG/M
3300012401\|Ga0134055_1321475	All Organisms → cellular organisms → Archaea	1322	Open in IMG/M
3300012409\|Ga0134045_1066269	All Organisms → cellular organisms → Archaea	1297	Open in IMG/M
3300012410\|Ga0134060_1168145	All Organisms → cellular organisms → Archaea	624	Open in IMG/M
3300012532\|Ga0137373_10335674	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	1191	Open in IMG/M
3300012972\|Ga0134077_10219161	All Organisms → cellular organisms → Archaea	780	Open in IMG/M
3300012972\|Ga0134077_10541446	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	520	Open in IMG/M
3300012976\|Ga0134076_10302924	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	693	Open in IMG/M
3300014157\|Ga0134078_10376737	All Organisms → cellular organisms → Archaea	631	Open in IMG/M
3300015358\|Ga0134089_10478528	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	543	Open in IMG/M
3300015359\|Ga0134085_10451305	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300018433\|Ga0066667_10515591	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	987	Open in IMG/M
3300018468\|Ga0066662_10092682	All Organisms → cellular organisms → Archaea	2110	Open in IMG/M
3300026298\|Ga0209236_1240512	All Organisms → cellular organisms → Archaea	606	Open in IMG/M
3300026306\|Ga0209468_1169646	All Organisms → cellular organisms → Archaea	554	Open in IMG/M
3300026317\|Ga0209154_1161560	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	919	Open in IMG/M
3300026334\|Ga0209377_1209909	All Organisms → cellular organisms → Archaea	646	Open in IMG/M
3300026342\|Ga0209057_1035214	All Organisms → cellular organisms → Archaea	2565	Open in IMG/M
3300026523\|Ga0209808_1284011	All Organisms → cellular organisms → Archaea	531	Open in IMG/M
3300026536\|Ga0209058_1275931	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	580	Open in IMG/M
3300026538\|Ga0209056_10160594	All Organisms → cellular organisms → Archaea	1704	Open in IMG/M
3300026548\|Ga0209161_10491133	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300026551\|Ga0209648_10654204	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	575	Open in IMG/M
3300027875\|Ga0209283_10740633	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	610	Open in IMG/M
3300027882\|Ga0209590_10138094	All Organisms → cellular organisms → Archaea	1499	Open in IMG/M
3300027882\|Ga0209590_10709527	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	643	Open in IMG/M
3300031720\|Ga0307469_10647496	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon 13_1_20CM_2_51_12	951	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	98.10%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	59.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.95%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	37.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010075	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010083	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010091	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010101	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010103	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10855582	3300002557	Grasslands Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPK
JGI25383J37093_100905041	3300002560	Grasslands Soil	MSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEV
JGI25384J37096_100541811	3300002561	Grasslands Soil	MSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHKLKE
JGI25382J43887_102292562	3300002908	Grasslands Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIV
JGI25386J43895_101151352	3300002912	Grasslands Soil	VTGLSEGFDFDSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLAEVAHKLKE
Ga0066672_101769961	3300005167	Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKT
Ga0066680_101819593	3300005174	Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPV
Ga0066679_101102131	3300005176	Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTG
Ga0066679_102415752	3300005176	Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTILQGLPKTGRSLDEVAHRL
Ga0066679_106912692	3300005176	Soil	LTESLSEDFDFDAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKT
Ga0066675_103410751	3300005187	Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTG
Ga0066675_109386571	3300005187	Soil	MTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLAEV
Ga0070708_1013982661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQG
Ga0066686_100900344	3300005446	Soil	MTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQ
Ga0066689_109937181	3300005447	Soil	VQHLTENLSEDFDFNAALKELDKSEPHLVVRVEFRRWGKPVTIVQGLPK
Ga0066681_100118251	3300005451	Soil	VQHLTENLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLP
Ga0070707_1006661672	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LIESLSDDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGL
Ga0066697_102658431	3300005540	Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVT
Ga0066701_100964601	3300005552	Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRS
Ga0066707_104095272	3300005556	Soil	MTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTG
Ga0066704_101426171	3300005557	Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWG
Ga0066703_101913533	3300005568	Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPV
Ga0066651_100021411	3300006031	Soil	LTENLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGL
Ga0066658_105112872	3300006794	Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLP
Ga0066665_106115582	3300006796	Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVT
Ga0066659_101437921	3300006797	Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIV
Ga0079221_116172422	3300006804	Agricultural Soil	MSLTENLSGDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIV
Ga0066710_1023147771	3300009012	Grasslands Soil	VTGLSEGFDFDSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLA
Ga0066710_1025033551	3300009012	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLA
Ga0099828_105071073	3300009089	Vadose Zone Soil	MSEGFNLDTALKELDKSETHLVVRMELRKWGKPMTVIQGLPKTGKSIDEIAHK
Ga0099827_101791001	3300009090	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVKVEFRRWGKPVTVVQGLPKTGRS
Ga0099827_111576871	3300009090	Vadose Zone Soil	VTELSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVT
Ga0066709_1014026392	3300009137	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGL
Ga0127434_1627053	3300010075	Grasslands Soil	MESLSGDFDFDAALKELDKSETHLVVRVELRRWGKPMTIIQGLPETGRSLDEVAHR
Ga0127478_10044812	3300010083	Grasslands Soil	MESLSEDFDFDAALKELDKSETHLVVRVELRRWGK
Ga0127485_10045041	3300010091	Grasslands Soil	MESLSGDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQGL
Ga0127481_10986362	3300010101	Grasslands Soil	MESLSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMT
Ga0127500_10165192	3300010103	Grasslands Soil	MESLSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPETGRSLDE
Ga0127446_10657832	3300010104	Grasslands Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLD
Ga0127494_11395631	3300010107	Grasslands Soil	MESLSGDFDFDAALKELDKSETHLVVRVELRRWGKPMT
Ga0127497_10980232	3300010109	Grasslands Soil	MESLSEDFDFDAALKELDKSETHLVVRVELRRWGKPMTIIQGLP
Ga0127460_11122701	3300010114	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVARKLKER
Ga0127449_11104482	3300010117	Grasslands Soil	MAPPVKHLTESLSEDFDFNAALKELDKSETHLVVRVEFR
Ga0127451_11518602	3300010120	Grasslands Soil	MESLSGDFDFDAALKELDKSETHLVVRVELRRWGKPMTIIQGLPE
Ga0127488_11459991	3300010122	Grasslands Soil	MESLSGDFDFDAALKELDKSETHLVVRVELRRWGKPMTIIQ
Ga0127443_10376661	3300010125	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRS
Ga0127459_10393482	3300010133	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVELRRWGKPMTIIQGLPKTGRSLDEI
Ga0127484_11566812	3300010134	Grasslands Soil	VEHLIENLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLDEVAHR
Ga0127447_11566913	3300010136	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPK
Ga0127456_12251522	3300010140	Grasslands Soil	LSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTII
Ga0127483_10744531	3300010142	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPK
Ga0134088_102291741	3300010304	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLAEVAHKLKERLAT
Ga0134088_102472771	3300010304	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQG
Ga0134065_101430942	3300010326	Grasslands Soil	LTENLSEDFDFNAALKELDKSETHLIVRVEFRRWGKPVTIVQGL
Ga0134071_102964991	3300010336	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVELRRWGKPMTIIQGLPK
Ga0126379_101029471	3300010366	Tropical Forest Soil	LSGDFDFNAALKELDKTETHLVVRVEFRRWGKPMTIIQG
Ga0137388_115511711	3300012189	Vadose Zone Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQ
Ga0137383_111497092	3300012199	Vadose Zone Soil	VTVLSEGFDFNSALKELDKSETHLTVRVEFRRWGK
Ga0137383_111973242	3300012199	Vadose Zone Soil	LSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPETGRSL
Ga0137380_101393961	3300012206	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHKLKE
Ga0137380_104859791	3300012206	Vadose Zone Soil	VSRVAGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHK
Ga0137376_105846223	3300012208	Vadose Zone Soil	LSEDFDFNAALKELDKSETHLVVRVEFLRWGKPVTIVQGLPKTGRSLDEVAHR
Ga0137379_113611841	3300012209	Vadose Zone Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLDE
Ga0134028_12715711	3300012224	Grasslands Soil	MESLSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQ
Ga0137387_101505811	3300012349	Vadose Zone Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQG
Ga0137387_101714663	3300012349	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVV
Ga0137386_100421631	3300012351	Vadose Zone Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLDEV
Ga0137386_107017481	3300012351	Vadose Zone Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLDEVAH
Ga0137386_112151631	3300012351	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVT
Ga0137384_108418022	3300012357	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPK
Ga0137360_112202392	3300012361	Vadose Zone Soil	LIESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGL
Ga0137361_109680552	3300012362	Vadose Zone Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPKTGRSLD
Ga0134042_11107212	3300012373	Grasslands Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPK
Ga0134058_11729541	3300012379	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKP
Ga0134043_10808761	3300012392	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHKLKERLAT
Ga0134056_13536251	3300012397	Grasslands Soil	LSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQGL
Ga0134056_13552392	3300012397	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPKTGRSLDEIA
Ga0134051_12234581	3300012398	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGL
Ga0134055_10506472	3300012401	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPKT
Ga0134055_13214751	3300012401	Grasslands Soil	LIESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPKTGR
Ga0134045_10662691	3300012409	Grasslands Soil	LSEGFDLNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTG
Ga0134060_11681452	3300012410	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQ
Ga0137373_103356741	3300012532	Vadose Zone Soil	VSRVAGLSEGFDFNSALKELDKSETHLTVRVEFRR
Ga0134077_102191612	3300012972	Grasslands Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRR
Ga0134077_105414462	3300012972	Grasslands Soil	VSEGFDFNGALKDVDKSEAHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHKLKERLA
Ga0134076_103029241	3300012976	Grasslands Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGNP
Ga0134078_103767371	3300014157	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTI
Ga0134089_104785281	3300015358	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLDEVAHR
Ga0134085_104513052	3300015359	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKT
Ga0066667_105155912	3300018433	Grasslands Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGR
Ga0066662_100926821	3300018468	Grasslands Soil	MSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKT
Ga0209236_12405121	3300026298	Grasslands Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPKTG
Ga0209468_11696462	3300026306	Soil	LTENLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSL
Ga0209154_11615601	3300026317	Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTILQGLPKTGRSLDEVAHRLKA
Ga0209377_12099092	3300026334	Soil	LSEDFDFDAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPK
Ga0209057_10352147	3300026342	Soil	LTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLD
Ga0209808_12840111	3300026523	Soil	LSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGLPKTGRSLD
Ga0209058_12759312	3300026536	Soil	LSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVLQGLPKTGRSLA
Ga0209056_101605944	3300026538	Soil	VQHLTESLSEDFDFNAALKELDKSETHLVVRVEFRRWGKPVTIVQGL
Ga0209161_104911332	3300026548	Soil	MESLSEDFDFDAALKELDKSETHLVVRVEFRRWGKPMTIIQGLPETGRSLD
Ga0209648_106542041	3300026551	Grasslands Soil	VTVLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTG
Ga0209283_107406332	3300027875	Vadose Zone Soil	LSEGFDFNSALKELDKSETHLTIRVEFRRWGKPVTVVQGLPKTGRSL
Ga0209590_101380943	3300027882	Vadose Zone Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTGRSLAEVAHKL
Ga0209590_107095271	3300027882	Vadose Zone Soil	VTELSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTV
Ga0307469_106474962	3300031720	Hardwood Forest Soil	VTGLSEGFDFNSALKELDKSETHLTVRVEFRRWGKPVTVVQGLPKTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095237

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences