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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F095218 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 105 |
| Average Sequence Length | 67 residues |
| Representative Sequence | MRFRTSLCLATLFLVCFTIAAWSTPLPAQPAADSLQPTPDNQSLSGQIASVGDAEFSVQVTKDKDVNTVQFL |
| Number of Associated Samples | 80 |
| Number of Associated Scaffolds | 105 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 3.81 % |
| % of genes from short scaffolds (< 2000 bps) | 3.81 % |
| Associated GOLD sequencing projects | 69 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.31 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (95.238 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (44.762 % of family members) |
| Environment Ontology (ENVO) | Unclassified (38.095 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (47.619 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 21.00% β-sheet: 21.00% Coil/Unstructured: 58.00% | Feature Viewer |
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| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.31 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 105 Family Scaffolds |
|---|---|---|
| PF02620 | YceD | 11.43 |
| PF06271 | RDD | 10.48 |
| PF13432 | TPR_16 | 2.86 |
| PF03747 | ADP_ribosyl_GH | 2.86 |
| PF13620 | CarboxypepD_reg | 1.90 |
| PF13248 | zf-ribbon_3 | 1.90 |
| PF01522 | Polysacc_deac_1 | 0.95 |
| PF00106 | adh_short | 0.95 |
| PF14294 | DUF4372 | 0.95 |
| PF03544 | TonB_C | 0.95 |
| PF00982 | Glyco_transf_20 | 0.95 |
| PF08281 | Sigma70_r4_2 | 0.95 |
| PF01566 | Nramp | 0.95 |
| PF13424 | TPR_12 | 0.95 |
| PF02469 | Fasciclin | 0.95 |
| COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
|---|---|---|---|
| COG1399 | 23S rRNA accumulation protein YceD (essential in plants, uncharacterized in bacteria) | Translation, ribosomal structure and biogenesis [J] | 11.43 |
| COG1714 | Uncharacterized membrane protein YckC, RDD family | Function unknown [S] | 10.48 |
| COG1397 | ADP-ribosylglycohydrolase | Posttranslational modification, protein turnover, chaperones [O] | 2.86 |
| COG0380 | Trehalose-6-phosphate synthase, GT20 family | Carbohydrate transport and metabolism [G] | 0.95 |
| COG0726 | Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family | Cell wall/membrane/envelope biogenesis [M] | 0.95 |
| COG0810 | Periplasmic protein TonB, links inner and outer membranes | Cell wall/membrane/envelope biogenesis [M] | 0.95 |
| COG1914 | Mn2+ or Fe2+ transporter, NRAMP family | Inorganic ion transport and metabolism [P] | 0.95 |
| COG2335 | Uncaracterized surface protein containing fasciclin (FAS1) repeats | General function prediction only [R] | 0.95 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 95.24 % |
| All Organisms | root | All Organisms | 4.76 % |
| Visualization |
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| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300007265|Ga0099794_10399202 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 718 | Open in IMG/M |
| 3300009089|Ga0099828_10199713 | All Organisms → cellular organisms → Bacteria | 1784 | Open in IMG/M |
| 3300012923|Ga0137359_10206279 | Not Available | 1755 | Open in IMG/M |
| 3300020583|Ga0210401_10079053 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3095 | Open in IMG/M |
| 3300026538|Ga0209056_10278579 | All Organisms → cellular organisms → Bacteria | 1170 | Open in IMG/M |
| 3300026551|Ga0209648_10081540 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2699 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 44.76% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 19.05% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 10.48% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.52% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 7.62% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 4.76% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 3.81% |
| Visualization |
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300000789 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300002558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm | Environmental | Open in IMG/M |
| 3300002911 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm | Environmental | Open in IMG/M |
| 3300002914 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm | Environmental | Open in IMG/M |
| 3300002916 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm | Environmental | Open in IMG/M |
| 3300005172 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 | Environmental | Open in IMG/M |
| 3300005177 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 | Environmental | Open in IMG/M |
| 3300005561 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 | Environmental | Open in IMG/M |
| 3300005568 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 | Environmental | Open in IMG/M |
| 3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
| 3300006797 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108 | Environmental | Open in IMG/M |
| 3300007255 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 | Environmental | Open in IMG/M |
| 3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300010303 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015 | Environmental | Open in IMG/M |
| 3300010320 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015 | Environmental | Open in IMG/M |
| 3300010325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG | Environmental | Open in IMG/M |
| 3300010364 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015 | Environmental | Open in IMG/M |
| 3300012096 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG | Environmental | Open in IMG/M |
| 3300012189 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG | Environmental | Open in IMG/M |
| 3300012199 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012200 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
| 3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012210 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
| 3300012356 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012363 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG | Environmental | Open in IMG/M |
| 3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
| 3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012977 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300018431 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104 | Environmental | Open in IMG/M |
| 3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300019789 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300020583 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M | Environmental | Open in IMG/M |
| 3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
| 3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
| 3300021479 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M | Environmental | Open in IMG/M |
| 3300021559 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M | Environmental | Open in IMG/M |
| 3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
| 3300024330 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
| 3300026300 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026301 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes) | Environmental | Open in IMG/M |
| 3300026318 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes) | Environmental | Open in IMG/M |
| 3300026335 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes) | Environmental | Open in IMG/M |
| 3300026377 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B | Environmental | Open in IMG/M |
| 3300026529 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes) | Environmental | Open in IMG/M |
| 3300026538 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes) | Environmental | Open in IMG/M |
| 3300026551 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes) | Environmental | Open in IMG/M |
| 3300027587 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes) | Environmental | Open in IMG/M |
| 3300027645 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027655 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027667 | Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027684 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes) | Environmental | Open in IMG/M |
| 3300027862 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031720 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515 | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
| 3300031754 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| INPhiseqgaiiFebDRAFT_1015460561 | 3300000364 | Soil | MRFRTSMVLATLFVACFTIAAWSTPPTVRPSPRPLLPTPDTQSLSGKIASVGDAEFSVQVTKGQDVNTVQFLVDDKTKVEGKLAVGAQA |
| INPhiseqgaiiFebDRAFT_1015463531 | 3300000364 | Soil | MRFRTSMFLITMFVACCTIAAWSTPLTADTQSLSGRIATIGDGEFSVQVTKDQDVKTVQFLVDDKTKVEGKLAVGA |
| JGI1027J11758_128956331 | 3300000789 | Soil | MRFRTSMVLATLFVACFTIAAWSTPPTVRPSPRPLLPTPDTQSLSGKIASVGDAEFSVQVTKGQDVNTVQFLVDDKTKVEGKLAVG |
| JGI25385J37094_101671671 | 3300002558 | Grasslands Soil | MRFRTSMCLATLFLFCFTIAAWSAPHLILAAGHTEPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVKFMVDDKT |
| JGI25390J43892_100331142 | 3300002911 | Grasslands Soil | MRFRTSLCLATLFLVCFTIAAWSTALPAQPAADNLQPTPDNQSLSGQIASVGDAEFSVQVTKDKNVNTVQFLVDGKTKVEGKLAVGAE |
| JGI25617J43924_103129701 | 3300002914 | Grasslands Soil | MCLTTLFLVCFTIAAWSTPPPAQPAAGHPQSTPDNQSLSGQITSVGDAEFSLQVAKNKEASTVHFQVDDKTKVXGKLAVGAQASV |
| JGI25389J43894_10802611 | 3300002916 | Grasslands Soil | MRFRTSLXLATLVLVSFTMGAWCTPLPAHSAAINLQPTPDKQSLSRQMAPGRSRILRTVRKDQGVNTVQFLVGGKTKIQGK |
| Ga0066683_108833801 | 3300005172 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFLVDGKT |
| Ga0066690_104468021 | 3300005177 | Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQIASVGD |
| Ga0066699_101198271 | 3300005561 | Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQIASVGDREFSVQVKKDQGVNTVPFLVD |
| Ga0066703_102287312 | 3300005568 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQF |
| Ga0066703_105642701 | 3300005568 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQF |
| Ga0066705_101521842 | 3300005569 | Soil | MRFRASLCLATLFLVCFTIAAWSTPPAAHPAAGPLEPTPDNQSLSGQITSVGDAEFSVQVAK |
| Ga0066705_105134371 | 3300005569 | Soil | MRFRTSLRLATLFVVCFTMAAWYTPLPVHSAAVNLQPIPHKQSLSRQ |
| Ga0066696_102236032 | 3300006032 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSGPIASV |
| Ga0066696_104296952 | 3300006032 | Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQIASVGDREFSVQVKK |
| Ga0066665_104567431 | 3300006796 | Soil | MRFRTWLCRATLFLVCFTIAAWSAPLPAQPAADSRQPALDNQALPGQIASVGGAEFSVPVKRTKM* |
| Ga0066659_101279861 | 3300006797 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIA |
| Ga0066659_101359871 | 3300006797 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFL |
| Ga0099791_101194671 | 3300007255 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPHPILAAGHAQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVRFMVDDKTKVEGKLAVGAQATVEYR |
| Ga0099791_105771552 | 3300007255 | Vadose Zone Soil | VFVVCFTIAAWSAPLPSVPEADHLSPTPDNQSVSGTVAAIGDAEFSLQVTKNQEVNTVQFLVDDKTKVEGKLAVG |
| Ga0099791_105887461 | 3300007255 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPLPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTV |
| Ga0099793_101522332 | 3300007258 | Vadose Zone Soil | MRFRNSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSV |
| Ga0099793_104114142 | 3300007258 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPLPALPVADHGSPGPDNQSLSG |
| Ga0099794_101091851 | 3300007265 | Vadose Zone Soil | MLFLFFFTITAWSTPHPILAAGCSEPTPDNQSLSGQITSVGDAEFSVQVAKNKDSS |
| Ga0099794_103098042 | 3300007265 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPHPILAAGHAQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTV |
| Ga0099794_103992021 | 3300007265 | Vadose Zone Soil | MCLATLFLCCLTIAAWSTPLPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQFM |
| Ga0099828_101997131 | 3300009089 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTEADSLQPAPDNQSLSGPIAS |
| Ga0066709_1045264201 | 3300009137 | Grasslands Soil | MRFRAPLCLATLFLVCFTIAAWSTPPAAHPAAGPLEPTPDNQSLSGQITSVGDAEFSVQVAKNKDASTVQFL |
| Ga0134082_101991732 | 3300010303 | Grasslands Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSGPIASVGDAEFS |
| Ga0134109_102244062 | 3300010320 | Grasslands Soil | MRFRGSLCLATLFLVCFTIAAWSTPPAAHSAAGPLKPTPDNQSLSGQITSIG |
| Ga0134064_100936823 | 3300010325 | Grasslands Soil | MRFRTSLCLATLFLVCFTMAAWSTPLPDQQSLWGQIASVGDREFS |
| Ga0134066_100494471 | 3300010364 | Grasslands Soil | MRFRTSLCLATLFLVCFTMAAWCTPLPAHSAAVNLQPTPDKQSLSRQMASVGDREFSVQVRKDQGVNTVQ |
| Ga0137389_100531701 | 3300012096 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTVADSLQPTPDNQSLSGP |
| Ga0137388_104940682 | 3300012189 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPLPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQFMVDDKTKVEGKLAVG |
| Ga0137383_109239441 | 3300012199 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFL |
| Ga0137382_102689512 | 3300012200 | Vadose Zone Soil | MRFRASLCLATLFFVCFTIAAWSTPPAAQPAAGRLDPTPDNQSLSGQITSIGDAEFSVQVAKNKDASTVQFLV |
| Ga0137363_110179292 | 3300012202 | Vadose Zone Soil | MCLVTLFVVCFTIAAWSTPLRALPPAGYARPTPDSQSLSGTIASVGDAEFSVQAAKDKDA |
| Ga0137363_110443841 | 3300012202 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPHPILAAGHAQPIPDNQSLSGQITSVGDAEFSVQVAKNKDISTVRFMVD |
| Ga0137363_112543991 | 3300012202 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPHPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQ |
| Ga0137363_117427181 | 3300012202 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPLPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQFMVDDK |
| Ga0137399_103403141 | 3300012203 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPPPALPGADHLSPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQFM |
| Ga0137399_110124031 | 3300012203 | Vadose Zone Soil | MRFRTSLCLATLFLFCFTIAAWSAPHLILAAGHTEPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTV |
| Ga0137362_106014612 | 3300012205 | Vadose Zone Soil | MCLATLFLFCLTIAAWSTPHPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTV |
| Ga0137378_111308131 | 3300012210 | Vadose Zone Soil | MRFRASLCLATLFLVCFTIASWSTPPAAQPAAGPLEPTPDNHSLSGQIASVGDAEFSVQVAKNKDASTVQFLVDDKT |
| Ga0137377_110556132 | 3300012211 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTMAAWSTPLPAETAADSLQPAPDNQSLSGPIASVG |
| Ga0137377_118960122 | 3300012211 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSG |
| Ga0137370_101337871 | 3300012285 | Vadose Zone Soil | MRFRASLCLATLFLVCFTIAAWSTPPAAQPAAGPLEPRPDNQSLSGQITSIGDAEFSVQVAKNKDA |
| Ga0137371_111303952 | 3300012356 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAGRSTPLLAETAADSLQPAPDNQSLSGPIASVGDAEFSVQV |
| Ga0137360_110271731 | 3300012361 | Vadose Zone Soil | MFLATLFLVCFTIAAWSTPPTVQPAAGPLLPTPDTQSLSGKIASVGDAEFSVQMTKDQDVNTVQFLVDDKTKVEGKLAVGAQATV |
| Ga0137390_105218381 | 3300012363 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPPPALPGADHLSPTPDNQSLSGQITSVGDAEFS |
| Ga0137397_104817391 | 3300012685 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPHPILAAGHSEPTPDNQSLSGQITAVGDAEFSVQVAKNKDISTVQFMVDDQTKVEGKL |
| Ga0137396_105004352 | 3300012918 | Vadose Zone Soil | MRFRASLVLATLFVVCFTIAAWSAPYPILAAGHSEPTPDNQSLSGQITSVGDA |
| Ga0137394_101283083 | 3300012922 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPHPILAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKD |
| Ga0137394_106351492 | 3300012922 | Vadose Zone Soil | VFVVCFTIAAWSAPLPALPVVDHVSPGPDNQSLSGTVASVGDAEFSLQVAKNQDVNTVQFMVDDKTKVEGKLAVGAQATVEYR |
| Ga0137394_107682632 | 3300012922 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPHPILAAGHSQPTPDNQSLSGQITSV |
| Ga0137359_102062791 | 3300012923 | Vadose Zone Soil | MRFRTSMCLATLFLFCLMIAAWSTPLPTLAAGHSQPTPDNQSLSGQITSVG |
| Ga0137359_112907301 | 3300012923 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSAPLPAQTAADSLQPAPDNQSLSGPIASV |
| Ga0137416_105616322 | 3300012927 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPLPALPVADHGSPGPDNQSLSGTVASVGDAEFSLQVAKNQDVNTVQFMVD |
| Ga0137416_116812021 | 3300012927 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQPAADSLQPTPDNQSLSGQIASVGDAEFSVQVTKDKDVNTVQFL |
| Ga0137416_121750911 | 3300012927 | Vadose Zone Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFLVD |
| Ga0137404_119208571 | 3300012929 | Vadose Zone Soil | MCLATLFLFCFTIAAWSAPHLILAAGHTEPTPDNQSLSGQITSVGDAEFSVQVTKNKDISTVQFMVD |
| Ga0134087_101803852 | 3300012977 | Grasslands Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQ |
| Ga0137409_101708853 | 3300015245 | Vadose Zone Soil | MRFRTSMCLATLFLFCFTIAAWSTPHPILAAGHAQPTPDNQSLSGQITSVGDAEFSVQV |
| Ga0137409_103624102 | 3300015245 | Vadose Zone Soil | MRFRTSLCLATLFLFCLTIAAWSKPYPTLAAGHSQPTPDNQSLSGQITSVGDAEFSVQV |
| Ga0137403_104396562 | 3300015264 | Vadose Zone Soil | MRFRTSMCLATLFLFCLTIAAWSTPLPTLAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKD |
| Ga0066655_113982281 | 3300018431 | Grasslands Soil | MRFRASLCLATLFLVCFTIAAWSTPPAAHPAAGPLEPTPDNQSLSGQITSVGDAEFSVQVAKNKDASTVQFLA |
| Ga0066667_121573591 | 3300018433 | Grasslands Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQV |
| Ga0066669_115572142 | 3300018482 | Grasslands Soil | MRFRTSLCLATLFVVCFTIAAWCTPLPAQSAAVNLQPTPDKQSLSRQMASVGDREFSVQVRKDQGVNTVQFLVDGQTK |
| Ga0137408_14390957 | 3300019789 | Vadose Zone Soil | MCLAPLFLFIFTIGAWSTPHPTLAAGHSQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVQFMVMTRRKSKGKLAVGAQATGRVPFERKAKTSPFTSS |
| Ga0210407_105522572 | 3300020579 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTVADSLQPTPDNQSLSGPIASVGDAEFSVQVKKDKDVNTV |
| Ga0210399_104097892 | 3300020581 | Soil | MRFRTSLCLATLFLAFFTIAAWSTPLPARPAADRLQPAPDNQSLSGQILSVGDAEFSLQVKKNQDVNTVQFLVDDKTTVEGKLSVGARATV |
| Ga0210401_100790531 | 3300020583 | Soil | MRFRASMFLATLFVACFTIAAWSTPLPAQPAAGDPQPIPDNQSLSGTIAAIGDAEFSVQVAKDK |
| Ga0210404_102905371 | 3300021088 | Soil | MRFRTSLCLATLFLAFFTIAAWSTPLPARPAADRLQPAPDNQSLSGQILSVGDA |
| Ga0210400_111621931 | 3300021170 | Soil | MRFRTSLCLATLFLAFFTIAAWSTPLPARPAADRLQPAPDNQSLSGQILSVGDAEFSLQVKKNQDVNTVQFLVDDKTTVEGKLSVGARATVE |
| Ga0210410_114306962 | 3300021479 | Soil | MRFRTSLCLATLFLAFFTIAAWSTPLTARPAADRLQPAPDNQSLSGQILSVGDAEFSLQVKKNQDVNTV |
| Ga0210409_113053352 | 3300021559 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTVADSLQPTPDNQSLSGPIASVGDAEFSVQVKKDKDVNTVQ |
| Ga0242665_102859911 | 3300022724 | Soil | IAAWSTPLRALPAAGDARATPDSQSSSGTIASVGDAEFSVQVAKNKDESAVQFVVDDKTKVEGKLTVGARATVE |
| Ga0137417_11076712 | 3300024330 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPPPALPGADHLSPTPDNQSLSGQI |
| Ga0209027_12116152 | 3300026300 | Grasslands Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFLVDGK |
| Ga0209238_11643731 | 3300026301 | Grasslands Soil | MRFRGSLCLATLFLVCFTIAAWSTPPAAHSAAGPLKPTPDNPSLSGQITSIGDAEFSVQVAKNKDASTVQF |
| Ga0209471_10914631 | 3300026318 | Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAETAADSLQPAPDNQSLSGPIASVGDAEFSVQVTKDKDVNTVQFLVDGKTKVEGKLAVGAQ |
| Ga0209804_12160711 | 3300026335 | Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQIASVGDRE |
| Ga0257171_10170951 | 3300026377 | Soil | MRFRTSMCLATLFLFCLTIAAWSTPHPILAAGHAQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVKFMVDDKTKVEGKL |
| Ga0209806_11800661 | 3300026529 | Soil | MRFRTSMCLATLFLFCFTIAAWSAPHLILAAGHTEPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVKFMVDDKTKVE |
| Ga0209056_100281531 | 3300026538 | Soil | MRFRTSLCLATLFLVCFTMAAWSTLLPAPSAAINEQPTPDQQSLWGQIASVGDREFSVQVKKDQGVNTVPFLVDGQTKVE |
| Ga0209056_102785792 | 3300026538 | Soil | MRFRTWLCRATLFLVCFTIAAWSAPLPAQPAADSRQPALDNQALPGQIASVGGAEFSVPVKRTKM |
| Ga0209648_100815404 | 3300026551 | Grasslands Soil | VRFRTPMCLTTLFLVCFTIAAWSTPPPAQPAAGHPQSTPDNQSLSGQITSVGDAEFSLQVAKNKEASTVHFQVDDKTKV |
| Ga0209220_11887941 | 3300027587 | Forest Soil | MRFRASLLVILFLFCITTAAWSAPLPIQAVNHSQPTPDNQSLSGQITAVSAAQFSVQVAKNKDASIVQFV |
| Ga0209117_11817191 | 3300027645 | Forest Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTAADSLQPAPDNQSLSGPIASVGDAEFSVRV |
| Ga0209388_10432541 | 3300027655 | Vadose Zone Soil | MRFRTSMCLATLFLFCLTIAAWSTPHPILAAGHAQPTPDNQSLSGQITSVGDAEFSVQVAKNKDISTVR |
| Ga0209009_10310401 | 3300027667 | Forest Soil | MRFRISLCLATLFLVCFTVAAWSTPLPARTVADSLQPTPDNQSLSGPIASVADAEFSIQVTKDKDVNTVQFLVDGILKSIHAHGESI |
| Ga0209588_12283431 | 3300027671 | Vadose Zone Soil | MRFRTSLCLATLFLFCFTIAAWSTPYPILAAGHSLPTAENQSLSGQITSVGDAEFSVQV |
| Ga0209626_11836111 | 3300027684 | Forest Soil | MRFRTSLCLATLFLVCFTIAAWSTPLPAQTVADSLQPTPDNQSLSGPIASVG |
| Ga0209701_100642071 | 3300027862 | Vadose Zone Soil | MRFRTSLCLATLFLFFFTITAWSTPHPILAAGYSEPTPDNQSLSGQITSVGDAEFSVQVA |
| Ga0137415_108331291 | 3300028536 | Vadose Zone Soil | MRFRTSLVLATLFVVCFTIAAWSAPPPALPGADHLSPTPDNQSLSGQITSVGDAEFSV |
| Ga0222749_105004861 | 3300029636 | Soil | MRFRASMFLATLFVACFTIAAWSTPLPAQPVAGDPQPIPDNQSLSGTIAAIGDAEFSVQVAKDKDVSTVQFLVDDKTKVEGKLTVGAQAT |
| Ga0307469_105903352 | 3300031720 | Hardwood Forest Soil | SLCLATLFLVCFTMAAWSTPLPAQSAAVNLQPTPDKQSLWGPIASAGDREFSVPIALGVFVTLE |
| Ga0307469_106434672 | 3300031720 | Hardwood Forest Soil | MRFWASLLVTLFLFCITTAAWSAPLPILAMSHSQPTPDNQSLSGQITAVSAAQFSVQVAKNKDASIVQF |
| Ga0307468_1014612122 | 3300031740 | Hardwood Forest Soil | MRFRTSLFLATAFLFCFTIAAWSTPLPILAAGPSQPTPDNQSLSGQIISVGDAEFSVQVAKNKDVSTVQFMVD |
| Ga0307477_110006212 | 3300031753 | Hardwood Forest Soil | MRFLASMLLVTLFVACFTIAAWSTSLTAQLATGALQPTADNQSLSGQITSIGDAEFSVQVAKNKDVN |
| Ga0307475_104895362 | 3300031754 | Hardwood Forest Soil | MRFRTALCLATLFLVCFTVAAWSTPRSAQLLDYPRPTPDNQSLSGKIASVGDATFSVEVTKNQEVSTIEFLIDGDT |
| Ga0307471_1000584511 | 3300032180 | Hardwood Forest Soil | MRFRTSLRLATLFLVCFTMAAWSTPLPAQSAAVNLQPTPDKQSLWGPIASAGDREFSVPIALGVFVTLE |
| Ga0307471_1027123862 | 3300032180 | Hardwood Forest Soil | MRFRASLCLATLFLVCFTIAAWSTPPAAHPAAGPLEPTPDNQSLSGQITSVGDAEFSVQ |
| Ga0307471_1027280481 | 3300032180 | Hardwood Forest Soil | MRFRTSLCLATLFLFCLTIAAWSTPHPILAAGHSQPTPDNQSLSGQITSV |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |