NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095214

Metagenome Family F095214

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095214
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 56 residues
Representative Sequence GALISVALTAQASQCSVKLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAA
Number of Associated Samples 84
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 94.29 %
% of genes from short scaffolds (< 2000 bps) 80.95 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (90.476 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(47.619 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(59.048 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 23.53%    β-sheet: 18.82%    Coil/Unstructured: 57.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF00857Isochorismatase 4.76
PF00583Acetyltransf_1 3.81
PF00072Response_reg 2.86
PF13011LZ_Tnp_IS481 2.86
PF04542Sigma70_r2 2.86
PF05694SBP56 2.86
PF03729DUF308 1.90
PF08530PepX_C 1.90
PF02201SWIB 1.90
PF07681DoxX 1.90
PF00903Glyoxalase 1.90
PF00561Abhydrolase_1 0.95
PF13596PAS_10 0.95
PF11396PepSY_like 0.95
PF08592Anthrone_oxy 0.95
PF13673Acetyltransf_10 0.95
PF06475Glycolipid_bind 0.95
PF01894UPF0047 0.95
PF13192Thioredoxin_3 0.95
PF00313CSD 0.95
PF01740STAS 0.95
PF01588tRNA_bind 0.95
PF12732YtxH 0.95
PF13483Lactamase_B_3 0.95
PF07228SpoIIE 0.95
PF11752DUF3309 0.95
PF00196GerE 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 4.76
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 4.76
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 2.86
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 2.86
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 2.86
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 2.86
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 1.90
COG2936Predicted acyl esteraseGeneral function prediction only [R] 1.90
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 1.90
COG4270Uncharacterized membrane proteinFunction unknown [S] 1.90
COG5531DNA-binding SWIB/MDM2 domainChromatin structure and dynamics [B] 1.90
COG0073tRNA-binding EMAP/Myf domainTranslation, ribosomal structure and biogenesis [J] 0.95
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 0.95
COG2517Predicted RNA-binding protein, contains C-terminal EMAP domainGeneral function prediction only [R] 0.95
COG3554Uncharacterized conserved proteinFunction unknown [S] 0.95

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.48 %
UnclassifiedrootN/A9.52 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100685656Not Available903Open in IMG/M
3300002245|JGIcombinedJ26739_101725485All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300005186|Ga0066676_10019362All Organisms → cellular organisms → Bacteria3528Open in IMG/M
3300005187|Ga0066675_11295430Not Available537Open in IMG/M
3300005450|Ga0066682_10308271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300005454|Ga0066687_10689030All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005467|Ga0070706_100042030All Organisms → cellular organisms → Bacteria4222Open in IMG/M
3300005467|Ga0070706_100576236All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300005471|Ga0070698_101022952All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005536|Ga0070697_101722024All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300005540|Ga0066697_10103291All Organisms → cellular organisms → Bacteria1663Open in IMG/M
3300005540|Ga0066697_10497668All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium692Open in IMG/M
3300005556|Ga0066707_10283192All Organisms → cellular organisms → Bacteria → Acidobacteria1084Open in IMG/M
3300005557|Ga0066704_10352378All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300005557|Ga0066704_10597380All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300005559|Ga0066700_11049337All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005560|Ga0066670_10123624All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300005586|Ga0066691_10513398All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006032|Ga0066696_10058961All Organisms → cellular organisms → Bacteria2185Open in IMG/M
3300006050|Ga0075028_100341301All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300006050|Ga0075028_100986795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300006102|Ga0075015_100333032All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300006796|Ga0066665_10602721All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300006796|Ga0066665_10840456All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium719Open in IMG/M
3300007258|Ga0099793_10030794All Organisms → cellular organisms → Bacteria → Acidobacteria2278Open in IMG/M
3300009012|Ga0066710_103056452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300009012|Ga0066710_104201278All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009038|Ga0099829_10204843All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300009137|Ga0066709_101849648All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300009137|Ga0066709_104557962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300010301|Ga0134070_10097838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1021Open in IMG/M
3300010303|Ga0134082_10320378All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300010304|Ga0134088_10249227All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium854Open in IMG/M
3300010304|Ga0134088_10566144All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300010333|Ga0134080_10039720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1820Open in IMG/M
3300010333|Ga0134080_10208559All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300010336|Ga0134071_10434662All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300010379|Ga0136449_101619768All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium982Open in IMG/M
3300011269|Ga0137392_11505283All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300011271|Ga0137393_10277158All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1426Open in IMG/M
3300012198|Ga0137364_10212979All Organisms → cellular organisms → Bacteria1419Open in IMG/M
3300012198|Ga0137364_10426351Not Available994Open in IMG/M
3300012199|Ga0137383_10054040All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2876Open in IMG/M
3300012200|Ga0137382_10256740All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300012205|Ga0137362_10614669All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium937Open in IMG/M
3300012206|Ga0137380_10134073All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2260Open in IMG/M
3300012207|Ga0137381_10120218All Organisms → cellular organisms → Bacteria2242Open in IMG/M
3300012207|Ga0137381_10260642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1507Open in IMG/M
3300012208|Ga0137376_10085682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2650Open in IMG/M
3300012209|Ga0137379_10049612All Organisms → cellular organisms → Bacteria4047Open in IMG/M
3300012210|Ga0137378_11074338All Organisms → cellular organisms → Bacteria → Acidobacteria719Open in IMG/M
3300012211|Ga0137377_11214078All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300012351|Ga0137386_10428190All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300012356|Ga0137371_11333367All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300012357|Ga0137384_10481692All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1020Open in IMG/M
3300012359|Ga0137385_10218289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1660Open in IMG/M
3300012359|Ga0137385_10243909All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300012361|Ga0137360_11125974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium678Open in IMG/M
3300012361|Ga0137360_11221184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium650Open in IMG/M
3300012363|Ga0137390_10069296All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300012582|Ga0137358_10633900All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum716Open in IMG/M
3300012917|Ga0137395_11155818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium545Open in IMG/M
3300012930|Ga0137407_12142855Not Available534Open in IMG/M
3300012976|Ga0134076_10341130All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300014150|Ga0134081_10156961Not Available751Open in IMG/M
3300014154|Ga0134075_10516896All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300014157|Ga0134078_10001541All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5789Open in IMG/M
3300015264|Ga0137403_10034243All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5347Open in IMG/M
3300015264|Ga0137403_10547711All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300015356|Ga0134073_10059522All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300015356|Ga0134073_10159468Not Available720Open in IMG/M
3300015372|Ga0132256_102586709All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300018012|Ga0187810_10216093All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300018431|Ga0066655_10682791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300018433|Ga0066667_10008846All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4708Open in IMG/M
3300018433|Ga0066667_11006785All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300018482|Ga0066669_11612344All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300021170|Ga0210400_11370624All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300025910|Ga0207684_10046493All Organisms → cellular organisms → Bacteria3682Open in IMG/M
3300025910|Ga0207684_10500239All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1042Open in IMG/M
3300026277|Ga0209350_1152031All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300026295|Ga0209234_1309559All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300026315|Ga0209686_1096974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1028Open in IMG/M
3300026315|Ga0209686_1191746All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300026317|Ga0209154_1181864Not Available837Open in IMG/M
3300026327|Ga0209266_1097803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1290Open in IMG/M
3300026327|Ga0209266_1253598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300026333|Ga0209158_1323974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300026523|Ga0209808_1065586All Organisms → cellular organisms → Bacteria1602Open in IMG/M
3300026528|Ga0209378_1186343All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300026529|Ga0209806_1029139All Organisms → cellular organisms → Bacteria2754Open in IMG/M
3300026537|Ga0209157_1025399All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3545Open in IMG/M
3300026538|Ga0209056_10089402All Organisms → cellular organisms → Bacteria2558Open in IMG/M
3300026550|Ga0209474_10020165All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5170Open in IMG/M
3300027565|Ga0209219_1077974Not Available822Open in IMG/M
3300027748|Ga0209689_1167296Not Available1020Open in IMG/M
3300027748|Ga0209689_1268589All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300027875|Ga0209283_10691249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300027908|Ga0209006_10642713All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium873Open in IMG/M
3300028047|Ga0209526_10003729All Organisms → cellular organisms → Bacteria10384Open in IMG/M
3300028828|Ga0307312_10896686All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300028906|Ga0308309_10831140Not Available802Open in IMG/M
3300031708|Ga0310686_109150786All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3442Open in IMG/M
3300031754|Ga0307475_10980524All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300031820|Ga0307473_11329797All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil25.71%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil12.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil9.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.71%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.95%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.95%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.95%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10068565623300002245Forest SoilGCSIILAAPCDFIRQLLELTNLTSAFEVHPTLEAASVALHGRAA*
JGIcombinedJ26739_10172548523300002245Forest SoilDAAGLGALISVALTAQAGQCWVKLAAPGNFIRQLLELTRLTSVFEIHPTLDAATVASRGQAA*
Ga0066676_1001936213300005186SoilVELIDAAGLGALISVALTAQASQCSIKLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0066675_1129543013300005187SoilAGLGALISVALTAQANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDAATVAFREQAA
Ga0066682_1030827123300005450SoilVELIDAAGLGALISVALTAQASQCSVKLAAPGNLIRELLDLTKLTSVFELYPTLDAATVASRGQAA*
Ga0066687_1068903013300005454SoilQCSVTLAAPGNLILELLELTKLTSVFELYRTLDVAVVVELG*
Ga0070706_10004203043300005467Corn, Switchgrass And Miscanthus RhizosphereMIDAAGLGALISIALTAQASQCSVKLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAARPTGVTTLLRR*
Ga0070706_10057623613300005467Corn, Switchgrass And Miscanthus RhizosphereALISVALRAQASQCSVKLAAPGNLIRQLLELTQLTSVFEVYPTLDAATVASRGQAA*
Ga0070698_10102295223300005471Corn, Switchgrass And Miscanthus RhizosphereTLISVALTAQASQCSVTLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0070697_10172202423300005536Corn, Switchgrass And Miscanthus RhizosphereASQCSVKLAAPGNLIRQLLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0066697_1010329133300005540SoilLGALISVALTAQASQYSVKLAAPGNLILELLEITKLTSVFEVHPTLDAATVAFREQAA*
Ga0066697_1049766823300005540SoilIDAAGLGALISVALTAQASQCSVKLAAPGYLIRQLLELTKLTSVFEVHSTLDAATVSSRGQAA*
Ga0066707_1028319223300005556SoilMIDAAGLGALISVALTAQASQYSVKLAAPGNLILELLEITKLTSVFEVHPTLDAATVAFREQAA*
Ga0066704_1035237823300005557SoilGALISVALTAQANQCSVTLAATANLIRELLELTKLTSIFEVHPTLDTATVAFREQVA*
Ga0066704_1059738023300005557SoilLGALISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG*
Ga0066700_1104933713300005559SoilTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG*
Ga0066670_1012362413300005560SoilMIDAAVLGALISVALTAQANQCSVTLATPGNLIRELLELTKLTSVFEVHP
Ga0066691_1051339813300005586SoilLISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYRTLDVAVVVELG*
Ga0066696_1005896113300006032SoilAGLGALISGVLTAQASQCSVELAAPGNLILELLELTKLISVFELYPTLDAATVASREQAA
Ga0075028_10034130113300006050WatershedsIRQLLELTKLTSVFEIHPTLDAATIAFSGPAARQTRFSSRR*
Ga0075028_10098679523300006050WatershedsSIKLAAPSNRIRQLLELTKLASVFELYPTLDAATVTSRGQAA*
Ga0075015_10033303223300006102WatershedsAAGLGALISVAMTARAGRYSVKLAAPCNRVRQLLELTKLTTIFELSPTVEAATVMSRAQGA*
Ga0066665_1060272113300006796SoilANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0066665_1084045623300006796SoilSVALTAQASQCSIKLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0099793_1003079443300007258Vadose Zone SoilAAGLGALISVALTAQARQCSVKLAAPRNLIRRLLELTKLTSVFEVYSTLDAATVASRGQAA*
Ga0066710_10305645223300009012Grasslands SoilIDAAGLGALISVALTAQASQCSVTLAAPGNLIRQLLELTKLTSVFELHPTLDAATVASRGQAA
Ga0066710_10420127813300009012Grasslands SoilANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDAATVASRGQAA
Ga0099829_1020484313300009038Vadose Zone SoilQASQCSVKLAAPGNLIRQLLELTKLTSVFEIHPTLDAATVVSRGQAA*
Ga0066709_10184964823300009137Grasslands SoilIDAAGLGALISVALTAQASQCSVTLAAPGNLIRQLLELTKLTSVFELHPTLDAATVASRGQAA*
Ga0066709_10455796213300009137Grasslands SoilGALISVALTAQANQCSVTLATPGNLIRELLELTKLTSVFEVHPTLDAATVAFREQAA*
Ga0134070_1009783813300010301Grasslands SoilAAGLGALISGVLTAQASQCSVELAAPGNLIRQLLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0134082_1032037813300010303Grasslands SoilIDAAGLGALISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG
Ga0134088_1024922723300010304Grasslands SoilAGLGALISVALTAQASQCSIKLAAPGNLILELLELTKLTSVFEVHPTLDAPTVASREQAA
Ga0134088_1056614423300010304Grasslands SoilVEMIDAAGLGALISVALTAQASQCSVKLAAPGYLIRQLLELTKLTSVFEVHSTLDAATVSSRGQAA*
Ga0134080_1003972023300010333Grasslands SoilAGLGALISVALTAQASQCSIKLAAPGNLIRQLLELTKLTSVFEVHSTLDAATVASRGQAA
Ga0134080_1020855923300010333Grasslands SoilAQASQCSVKLAAPGNLILELLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0134071_1043466223300010336Grasslands SoilAAGLGALISVALAAQASQCSVKLAAPGNLILELLELTKLTSVFEVHPTLDAATVAFRQSQRQEQAPACKF*
Ga0136449_10161976823300010379Peatlands SoilALTAQASQYTIKLAAPGNLIRQLLELTKLTSVFEIHPTLDAATVASRGQAA*
Ga0137392_1150528323300011269Vadose Zone SoilMIDAAGLGALISVALAAQASQCSVELAAPGNLIRQLLELTKLTSVFELYPTLDAATVASRGQAA*
Ga0137393_1027715833300011271Vadose Zone SoilGALISVALIAEASQCSVKLAAPGNLIRQLLELTNLTSVFEVHPTLDAATLAFRGQAA*
Ga0137364_1021297933300012198Vadose Zone SoilGALISVALTAQASQCSVKLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0137364_1042635113300012198Vadose Zone SoilASLCSVTLAAPANLIRELLELTKLTSVFEVHPTLDAATVAFREQAA*
Ga0137383_1005404063300012199Vadose Zone SoilSQCSVKLAAPGNLIRELLDLTKLTSVFELYPTLDAATVASRGQAA*
Ga0137382_1025674013300012200Vadose Zone SoilSSVEMIDAAGLGALICVALTAQASQCSVTLAAPGNLIRELLELTMLTSVFEVHPTLDAATVASRGQAA*
Ga0137362_1061466923300012205Vadose Zone SoilLGALISAALTAQASQCSVKLAAPGYLILELLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0137380_1013407313300012206Vadose Zone SoilISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0137381_1012021873300012207Vadose Zone SoilALTAQASQCSVTLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0137381_1026064213300012207Vadose Zone SoilMIDAAGLGALISGVLTAQASQCSVELAAPGNLILELLELTKLTSVFEVHSTLDAAT
Ga0137376_1008568283300012208Vadose Zone SoilQCSVTVAAPGNLILELLELTKLTSVFEVHPTLDAATVASRGQVA*
Ga0137379_1004961213300012209Vadose Zone SoilLGALISVALTAQASQCSVTLAAPGNLIRKLLELTKLTSVFEVHPTLDAATVASRGQAAA*
Ga0137378_1107433823300012210Vadose Zone SoilAGLGALISVALTAQASQCSVTLAAPGNLIRQLLELTKLTSVFEVHPTLDAATVASREQAA
Ga0137377_1121407813300012211Vadose Zone SoilASQCSVTLAAPGNLIRQLLELTKLTSVFEVHPTLDAATVASREQAA*
Ga0137386_1042819023300012351Vadose Zone SoilMAQESQCSVTLAAPGNFIRQLLELTKLTFVFEVHPTLDAATVASRGQAA*
Ga0137371_1133336713300012356Vadose Zone SoilAVLGALISVALTAQANQCSVTLATPGNLIRELLELTKLTSVFEVHPTLDAATVAFREQAA
Ga0137384_1048169223300012357Vadose Zone SoilALTAQASQCSVELAAPGNLILELLELTKLISVFELYPTLDAATVASREQAA*
Ga0137385_1021828913300012359Vadose Zone SoilAGLGALISGALTAQASQCSVELAAPGNLILELLELTKLISVFELYPTLDAATVASREQAA
Ga0137385_1024390933300012359Vadose Zone SoilKQCQSNLRTANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0137360_1112597423300012361Vadose Zone SoilVEMIDAAGLGGLISVALAAQASQCWVTLAAPSNLIRQLLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0137360_1122118413300012361Vadose Zone SoilISIALTAQASQCSVKLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAA*
Ga0137390_1006929653300012363Vadose Zone SoilLGALISVALRAQASQCSVKLAAPGNLIRQLLELTQLTSVFEVYSTLDAATVASRGQAA*
Ga0137358_1063390013300012582Vadose Zone SoilVEMIDAAGLGELVSVAVAAQGSGCSITLAAPGHFIRQLLELTKLTSVLELYPTLDAAILGFNGQAAEVASAEF*
Ga0137395_1115581813300012917Vadose Zone SoilMIDAAGLGALISVALRAQASQCSVKLAAPGNLIRQLLELTQLTSVFEVYSTLDAATVASRGQAA*
Ga0137407_1214285513300012930Vadose Zone SoilAQASQCSVKLAAPGNLIRQLLELTKLTSVFEVYTSLDAATVASRGQAV*
Ga0134076_1034113023300012976Grasslands SoilMIDAAVLGALISVALTAQANQCSVTLATPGNLIRELLELTKLTSVFEVHPTLDAATVAFRQSQRQEQAPACKF*
Ga0134081_1015696123300014150Grasslands SoilGLGALISVALTAQASQCSIKLAAPGNLIRQLLELTKLTSVFEVHSTLDAATVASREQAA*
Ga0134075_1051689613300014154Grasslands SoilAGLGALISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG*
Ga0134078_1000154113300014157Grasslands SoilAAGLGALISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG*
Ga0137403_1003424343300015264Vadose Zone SoilVELIDAAGLGALISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYPTLDVAVVVELG*
Ga0137403_1054771133300015264Vadose Zone SoilVELIDAAGLGALISVALTAQASQCSIKLAAPGNLIRKLLKLTKLTSVFEVHSTLDAATVASREQAA*
Ga0134073_1005952233300015356Grasslands SoilAQASQSSVKLAAPGNLIRELLDLTKLTSVFELYPTLDAATVASRGQAA*
Ga0134073_1015946823300015356Grasslands SoilGVEMIDAAGLGALISVALTAQASLCSVTLAAPANLIRELLELTKLTSVFEVHPTLDAATVAFREQAA*
Ga0132256_10258670923300015372Arabidopsis RhizosphereGALISVALTAQASQCSVKLAAPSNFIRQLLQLTTLTSVFEVHPTLEAATVASRGQAA*
Ga0187810_1021609313300018012Freshwater SedimentGLGALISVALRAQASQCSVKLSAPRKFIRQLLELTKLTSVFELYPTLEAATVASRGQAA
Ga0066655_1068279113300018431Grasslands SoilIDAAGLGALISVALTAQASQCSVKLAAPGYLIRQLLELTKLTSVFEVHPTLDAATVASRGQAA
Ga0066667_10008846103300018433Grasslands SoilSVALTAQASQCSIKLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA
Ga0066667_1100678523300018433Grasslands SoilMIDAAGLGALISVALTAQASQYSVKLAAPGNLILELLEITKLTSVFEVHPTLDAATVAFREQAA
Ga0066669_1161234413300018482Grasslands SoilQASQCSVTLAAPGNFIRQLLELTKLTSVFEVHPTLDAATVASRGQAA
Ga0210400_1137062423300021170SoilSIKLAAPGNLIRQLLELTELTSVFEVHPTLDAATVASRGQAASPTRLVSR
Ga0207684_1004649313300025910Corn, Switchgrass And Miscanthus RhizosphereLRAQASQCSVKLAAPGNLIRQLLELTQLTSVFEVHPTLHAATMAFRGHAA
Ga0207684_1050023913300025910Corn, Switchgrass And Miscanthus RhizosphereALISVALRAQASQCSVKLAAPGNLIRQLLELTQLTSVFEVYPTLDAATVASRGQAA
Ga0209350_115203113300026277Grasslands SoilIDAAGLGALISVALTAQANQCSVTLAATANLIRELLELTKLTSIFEVHPTLDTATVAFREQVA
Ga0209234_130955933300026295Grasslands SoilTAQASQCSIKLAAPGNLILELLELTKLTSVFEVHSTLDAATVASREQAA
Ga0209686_109697423300026315SoilTAQASQCSVKLAAPGYLIRQLLELTKLTSVFELYPTLDAATVASRGQAA
Ga0209686_119174613300026315SoilTAQASQCSVTLAAPGNLILELLELTKLTSVFELYRTLDVAVVVELG
Ga0209154_118186413300026317SoilQANQCSVTLATPGNLIRELLELTKLTSVFEVHPTLDAATVAFREQAA
Ga0209266_109780313300026327SoilCGVEMIDAAGLGALISVALTAEANQCSVKLAAPGYLIRQLLELTKLTSVFEVHPTLDAAAGAFRQSQRQEQAPACKF
Ga0209266_125359813300026327SoilIDAAGLGALISVALTAQASQCSIKLAAPGNLIRQLLELTKLTSVFEVHSTLDAATVASRGQAA
Ga0209158_132397413300026333SoilASLCSVTLAAPGNLILELLELTKLTSVFEVHPTLDAATVASRGQAA
Ga0209808_106558633300026523SoilALTAQANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDTATVAFREQVA
Ga0209378_118634323300026528SoilLGALISVALTAQANQCSVTLAATANLIRELLELTKLTSVFELYRTLDVAVIVELG
Ga0209806_102913953300026529SoilEMIDAAGLGALISVALTAQASQYSVKLAAPGNLILELLEITKLTSVFEVHPTLDAATVAFREQAA
Ga0209157_102539933300026537SoilQASQCSVELAAPGNLIRQLLELTKLTSVFEVHSTLDAATVASREQAA
Ga0209056_1008940253300026538SoilAQANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDAATVASRGQAA
Ga0209474_1002016513300026550SoilQCSIKLAAPGNLILELLELTKLTSVFEVHPTLDAPTVASREQAA
Ga0209219_107797423300027565Forest SoilPGNLIRQLLELTQLTSVLEVHPTLDAATLAFHAQMAQRNSTRVASR
Ga0209689_116729613300027748SoilANQCSVTLAATANLIRELLELTKLTSVFEVHPTLDTATVAFREQVA
Ga0209689_126858923300027748SoilLISVALTAQASQCSVTLAAPGNLILELLELTKLTSVFELYRTLDVAVVVELG
Ga0209283_1069124923300027875Vadose Zone SoilEMIDGAGLGELVSVAVTAQASQCSVKLAAPSDLIRQLLELTNLTSVFEVHPTLDAATLAFRGQAA
Ga0209006_1064271313300027908Forest SoilASGCSITLAAPDDFIRQLLELTNLTSVFEVHPTLEAASVASRGQAA
Ga0209526_1000372913300028047Forest SoilTAQACQCSIKLAAPGNLIRHLLELTKLTSVFEVYPTLDAATLAFHAQAA
Ga0307312_1089668613300028828SoilGLGELVSVAVAAQGSGCSITLAAPGHFIRQLLELTKLTSVLELCPTLDAAILGFNGQAAEVASAEF
Ga0308309_1083114023300028906SoilAVAAQSSGCSIILAAPCDFIRQLLELTNLTSVFEVHPTLEAASVALHGRAA
Ga0310686_10915078633300031708SoilLTAQASQCSVKLAAPGNLIRQLQELTKLTSIFELYPTLDTATIASRGQAA
Ga0307475_1098052413300031754Hardwood Forest SoilASGCSITIAAPGDFIRHLLELTKLTSVVEVYPTLDAAILALNEQAATVASAEF
Ga0307473_1132979713300031820Hardwood Forest SoilLTAQASQCSVKLAAPGNLIRQLLELTKLTSVFEVHPTLDAATVASRGQAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.