Metagenome Family F095193

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095193
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	72 residues
Representative Sequence	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL
Number of Associated Samples	83
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.81 %
% of genes near scaffold ends (potentially truncated)	31.43 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.429 % of family members)
Environment Ontology (ENVO)	Unclassified (32.381 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.78% β-sheet: 0.00% Coil/Unstructured: 39.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF09586	YfhO	2.86
PF13191	AAA_16	1.90
PF12802	MarR_2	1.90
PF13401	AAA_22	1.90
PF01326	PPDK_N	0.95
PF02627	CMD	0.95
PF06445	GyrI-like	0.95
PF00196	GerE	0.95
PF00355	Rieske	0.95
PF01654	Cyt_bd_oxida_I	0.95
PF11937	DUF3455	0.95
PF05729	NACHT	0.95
PF00753	Lactamase_B	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	0.95
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.95
COG1271	Cytochrome bd-type quinol oxidase, subunit 1	Energy production and conversion [C]	0.95
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.14 %
Unclassified	root	N/A	2.86 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.67 %
Unclassified	root	N/A	2.86 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.95 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	78.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.71 %
Unclassified	root	N/A	2.86 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.95 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	77.14 %
Unclassified	root	N/A	2.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.90 %
Candidatus Handelsmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria	0.95 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.95 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	77.14 %
Unclassified	root	N/A	2.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	77.14 %
Unclassified	root	N/A	2.86 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	77.14 %
Unclassified	root	N/A	2.86 %
Actinocrispum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinocrispum	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	77.14 %
Unclassified	root	N/A	2.86 %
Actinocrispum wychmicini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinocrispum → Actinocrispum wychmicini	0.95 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.95 %
Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	0.95 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005167\|Ga0066672_10594386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300005176\|Ga0066679_10091076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1838	Open in IMG/M
3300005177\|Ga0066690_10091002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1946	Open in IMG/M
3300005179\|Ga0066684_10058794	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300005181\|Ga0066678_10556635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	762	Open in IMG/M
3300005184\|Ga0066671_10724790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300005187\|Ga0066675_11030441	Not Available	617	Open in IMG/M
3300005332\|Ga0066388_102784986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	893	Open in IMG/M
3300005435\|Ga0070714_101068411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300005436\|Ga0070713_100668227	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005436\|Ga0070713_101788468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300005445\|Ga0070708_101054455	All Organisms → cellular organisms → Bacteria → Terrabacteria group	762	Open in IMG/M
3300005467\|Ga0070706_100381189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1313	Open in IMG/M
3300005468\|Ga0070707_100730060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	954	Open in IMG/M
3300005471\|Ga0070698_101117363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	737	Open in IMG/M
3300005537\|Ga0070730_10045787	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300005537\|Ga0070730_10219201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1264	Open in IMG/M
3300005537\|Ga0070730_10939033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300005542\|Ga0070732_10484070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	749	Open in IMG/M
3300005552\|Ga0066701_10011563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4064	Open in IMG/M
3300005559\|Ga0066700_10882574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300005561\|Ga0066699_10065576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2290	Open in IMG/M
3300005569\|Ga0066705_10177920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1322	Open in IMG/M
3300005569\|Ga0066705_10529931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300005574\|Ga0066694_10606071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300005598\|Ga0066706_10388439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1110	Open in IMG/M
3300005764\|Ga0066903_101292686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1362	Open in IMG/M
3300005764\|Ga0066903_102027763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1106	Open in IMG/M
3300005764\|Ga0066903_102778088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	950	Open in IMG/M
3300006797\|Ga0066659_11164736	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006797\|Ga0066659_11317916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300006800\|Ga0066660_11082291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	637	Open in IMG/M
3300006800\|Ga0066660_11374082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300006806\|Ga0079220_11181192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	629	Open in IMG/M
3300009012\|Ga0066710_101120901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1217	Open in IMG/M
3300009038\|Ga0099829_10950764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	713	Open in IMG/M
3300009038\|Ga0099829_11142056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	646	Open in IMG/M
3300009038\|Ga0099829_11399283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300009038\|Ga0099829_11514940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300009088\|Ga0099830_10100304	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2160	Open in IMG/M
3300009089\|Ga0099828_10998511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300009089\|Ga0099828_11100247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	706	Open in IMG/M
3300009090\|Ga0099827_10803484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	814	Open in IMG/M
3300009090\|Ga0099827_10858128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	786	Open in IMG/M
3300009143\|Ga0099792_10980042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300010046\|Ga0126384_10496119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1052	Open in IMG/M
3300010046\|Ga0126384_11890844	Not Available	569	Open in IMG/M
3300010321\|Ga0134067_10195124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300010358\|Ga0126370_10910685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	795	Open in IMG/M
3300010358\|Ga0126370_12351230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300010359\|Ga0126376_11695946	Not Available	667	Open in IMG/M
3300010359\|Ga0126376_12801776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300010360\|Ga0126372_10899413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	888	Open in IMG/M
3300010366\|Ga0126379_11329193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300010376\|Ga0126381_102779888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300010376\|Ga0126381_103415685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300011119\|Ga0105246_10497250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1035	Open in IMG/M
3300011269\|Ga0137392_10159440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1826	Open in IMG/M
3300011270\|Ga0137391_10095452	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300011271\|Ga0137393_10144627	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300011998\|Ga0120114_1119048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	504	Open in IMG/M
3300012014\|Ga0120159_1055139	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Handelsmanbacteria → Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10	1239	Open in IMG/M
3300012096\|Ga0137389_10997461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	718	Open in IMG/M
3300012189\|Ga0137388_10901153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300012199\|Ga0137383_10525805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300012201\|Ga0137365_10182499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1572	Open in IMG/M
3300012204\|Ga0137374_10032532	All Organisms → cellular organisms → Bacteria	5676	Open in IMG/M
3300012205\|Ga0137362_11123540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300012206\|Ga0137380_10582695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	979	Open in IMG/M
3300012207\|Ga0137381_10642748	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300012208\|Ga0137376_10928442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	747	Open in IMG/M
3300012210\|Ga0137378_10702712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	922	Open in IMG/M
3300012350\|Ga0137372_10944096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300012356\|Ga0137371_10783754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300012357\|Ga0137384_10944103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	694	Open in IMG/M
3300012359\|Ga0137385_10207396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1709	Open in IMG/M
3300012359\|Ga0137385_10659967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	875	Open in IMG/M
3300012362\|Ga0137361_11192484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	684	Open in IMG/M
3300012363\|Ga0137390_11934159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300012923\|Ga0137359_11006467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	715	Open in IMG/M
3300013770\|Ga0120123_1163613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300013772\|Ga0120158_10192530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1075	Open in IMG/M
3300014056\|Ga0120125_1047495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	941	Open in IMG/M
3300014497\|Ga0182008_10076832	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300015356\|Ga0134073_10031243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1340	Open in IMG/M
3300015356\|Ga0134073_10146848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	742	Open in IMG/M
3300015371\|Ga0132258_13008763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1168	Open in IMG/M
3300018433\|Ga0066667_10609060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	911	Open in IMG/M
3300018482\|Ga0066669_10738431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	868	Open in IMG/M
3300021362\|Ga0213882_10068276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinocrispum → Actinocrispum wychmicini	1419	Open in IMG/M
3300021384\|Ga0213876_10122781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1379	Open in IMG/M
3300025898\|Ga0207692_10801305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300025910\|Ga0207684_10329288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1316	Open in IMG/M
3300025910\|Ga0207684_10580302	All Organisms → cellular organisms → Bacteria → Terrabacteria group	958	Open in IMG/M
3300025928\|Ga0207700_10570132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300025928\|Ga0207700_11448835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	610	Open in IMG/M
3300026532\|Ga0209160_1118554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1306	Open in IMG/M
3300026550\|Ga0209474_10629768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300027842\|Ga0209580_10135183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1208	Open in IMG/M
3300027857\|Ga0209166_10146163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1292	Open in IMG/M
3300027857\|Ga0209166_10150746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300027874\|Ga0209465_10548210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300027875\|Ga0209283_10781757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300027882\|Ga0209590_10762763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300028828\|Ga0307312_10280587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1083	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.19%
Host-Associated	Host-Associated	3.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.19%
Plants	Host-Associated → Plants	3.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.24%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.95%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.05%
Loam	Environmental → Terrestrial → Soil → Loam	16.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.67%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.95%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.95%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066672_105943862	3300005167	Soil	VDPHDHPSEYEQLVALASRVDQLAREVETWLHLRERGAATAGARDSQRDWRRRRLAILRHSQALLTALLGDVEL*
Ga0066679_100910762	3300005176	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066690_100910021	3300005177	Soil	LASRVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066684_100587941	3300005179	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRH
Ga0066678_105566351	3300005181	Soil	VALASRVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066671_107247902	3300005184	Soil	LASRVDELLRELETWLRTRERSASTAGSRDLQNDWRRRRLTILRHSKALLAALLRDVEL*
Ga0066675_110304411	3300005187	Soil	VAESRSYAASKVEPLHGASDYEQLVGLASRVDQLLQELESWLHARERAASTSGARDRQHDWRRRRLTTVRHSQALLTALLRDVEL*
Ga0066388_1027849862	3300005332	Tropical Forest Soil	METPNQPTEYEQLVALASRVDQLLRELERWLHVRERVAAKGGTRIVEMTWRRRRLAIVRHSQALMAALLRDVEL*
Ga0070714_1010684111	3300005435	Agricultural Soil	MVVPPEQPTEYEQLVALASRVDQLLRELEAWLHVRERTAAVGGERGPEQTWRRRRLAIARQTEALMAALLRNVEL*
Ga0070713_1006682271	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVVPPEQPTEYEQLVALASRVDQLLRELEAWLHVRERTAAVGGERGPEQTWRRRRLAIARQTEALMAALLRDVEL*
Ga0070713_1017884681	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AQIQTDDGRVVTQVEHFDHASEYEQLVALASRVDQLLRELETWLHTRERGASTAGVREQERQWRRRRLAIVRHSQALLGALLRDIEL
Ga0070708_1010544552	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKPFEQATEYEQLVALASRVDELLRELETWLHMRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0070706_1003811892	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRELHIQIQSRRVISECVEPLPGASDYEQLIGLASRVDQVLRELETWLHARERAASTAGTRDRQHDWRRRRLTILRHSQALLAALLRDVEL*
Ga0070707_1007300602	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKPLEQATEYEQLVALASRVDELLRELETWLHARERTASTAGSRDRQSDWRRRRLTILRHSQALLAALLRDVEL*
Ga0070698_1011173632	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VKPLEQATEYEQLVALASRVDELLRELETWLHARERSASTAGTRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0070730_100457872	3300005537	Surface Soil	MEPLRGASDYEQLIGLASRVDQLLRELEAWLHARERAASTSGAHDRQHDWRRRRMATLRHSQALLAALLRDVEL*
Ga0070730_102192012	3300005537	Surface Soil	VKPFEQATEYEQLVALASRVDEVLRELETWLHTRERSASTAGSRDRQSDWRRRRLAILRHSQALLAALLRDVEL*
Ga0070730_109390331	3300005537	Surface Soil	VEPIENATEYEQLVALASRVDQVLRELETWLHARERTAATAAGRETEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0070732_104840701	3300005542	Surface Soil	VSECVEPLRSASDYEQLIGLASRVEQLLGELETWLHARERAASTVGARDRQHDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066701_100115633	3300005552	Soil	VDPHAHPSEYEQLVALASRVDQLAREVETWLHLRERGAATRGARDRQRDWRRRRLAILRHSRALLSALLRDVEL*
Ga0066700_108825742	3300005559	Soil	VKPLEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066699_100655761	3300005561	Soil	LASRVDELLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066705_101779202	3300005569	Soil	YEQLVALASRVDELLRELETWLHTRERSASPAGSRDRQTDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066705_105299312	3300005569	Soil	VKPFEQATEYEQLVALASRVDALLHELETWLHARERSASAAGIRDLQYDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066694_106060711	3300005574	Soil	VKPLEQATEYEQLVALASRVDELLRELETWLHARERSASAAGTRDRQNDWRRRRLTILRHSQALLAALLRDVEL
Ga0066706_103884392	3300005598	Soil	MEPLDHATEYEQLVALAGRVDQLLCELEAWLHARERRASTAGGREMEYNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0066903_1012926861	3300005764	Tropical Forest Soil	MELPDQPTEYEQLVALASRVDQLLGELEGWLHVRERHAAKGGARAMEKVWRSRRLAIVRHFQAILAALLRDVEL*
Ga0066903_1020277631	3300005764	Tropical Forest Soil	DYEQLVALATRVDQLLRELERWLHVRERLAAKGGARIVETTWRRRRLAIVRHSQALMAALLRDVEL*
Ga0066903_1027780883	3300005764	Tropical Forest Soil	MAPRDKPTDYEQLVALATRVDQLLRELERWLHVRERLAAKGGARIVETTWRRRRLAIVRHSQALMAALLRDVEL*
Ga0066659_111647361	3300006797	Soil	MEPLDHATEYEQLVALASRVDEVLRELETWLHARERSAATAAGRTTEHNWRRRRLAIVRHSQALLGALL
Ga0066659_113179161	3300006797	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLRTRERTASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066660_110822912	3300006800	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDLQNDRRRRRLTILRHSQALLAALLRDVEL*
Ga0066660_113740822	3300006800	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLRTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0079220_111811921	3300006806	Agricultural Soil	VEPQDHATEYEQLVGLASRVDQILCEVETWLHTRERIASTAGGRELQLRWRRRRLAILRHSQALLAALLRDVEL*
Ga0066710_1011209012	3300009012	Grasslands Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHARERNASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL
Ga0099829_109507642	3300009038	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0099829_111420561	3300009038	Vadose Zone Soil	LLRELETWLHTRERSASTAGSRDRQSDWRRRRLTILRHSQALLAALLRDVEL*
Ga0099829_113992832	3300009038	Vadose Zone Soil	VEPVDRATEYEELVALASRVDQLLRELETWLRVRERGASTGGSPEGQRDWRRRRLTILRHSQALLAALLRDVEL*
Ga0099829_115149401	3300009038	Vadose Zone Soil	VEPLDHASEYEQLVALASRVDQVLRELETWLHARERSAATAAGRETEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0099830_101003043	3300009088	Vadose Zone Soil	VKPLEHATEYEQLVALASRVDALLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALL
Ga0099828_109985112	3300009089	Vadose Zone Soil	VKPFAQATEYEQLVALASRVDELLRELETWLHTRERSASTAGTRDRQNDWRRRRRTILRHSQALLAALL
Ga0099828_111002472	3300009089	Vadose Zone Soil	RVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0099827_108034842	3300009090	Vadose Zone Soil	GATDHEQLVGLASHVDQLFRELETWLRARERAATTVGARDRQHDWRRRRLATLRHSQALLAALLRDVEL*
Ga0099827_108581283	3300009090	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGGRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0099792_109800422	3300009143	Vadose Zone Soil	VEPLDHATEYEQLVALASRVDQVLRELETWLHARERGAAISAGREMEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0126384_104961192	3300010046	Tropical Forest Soil	MEPRDKPTEYEQLVALASRVDQLLRELERWLHVRERIAAKGGARIVETSWRRRRLAIVRHSQALMAALLRGVEL*
Ga0126384_118908442	3300010046	Tropical Forest Soil	MSMKQPDQPTEYEQLVALASRVDQLLGELEGWLHVRERHAAKGGARAMEKVWRRRRLAIVRYSQAILAALLRDVEL*
Ga0134067_101951241	3300010321	Grasslands Soil	KPFEQATEYEQLVALASRVDELLRELETCLHTRERSASTAGSRDRQTDWRRRRLTILRHSQALLAALLRDVEL*
Ga0126370_109106852	3300010358	Tropical Forest Soil	SRVDQLLGELEGWLHVRERHAAKGGARALEKVWRSRRLAIVRYSQAILAALLRDVEL*
Ga0126370_123512301	3300010358	Tropical Forest Soil	MAPRDKPTDYEQLVALATRVDQLLRELERWLHVRERLAAKGGARIVETTWRRRRLAIVRHSQALMAALLRDIEL*
Ga0126376_116959462	3300010359	Tropical Forest Soil	MSMKQPDQPTEYEQLVALASRVDQLLGELEGWLHVRERHAAKGGARAMEKVWRSRRLAIVRYSQAILAALLRDVEL*
Ga0126376_128017761	3300010359	Tropical Forest Soil	MEPRDKPTEYEQLVALASRVDQLLRELERWLHVRERIAAKGGARIVETSWRRRRLAIVRHSQALMAALLRDVEL*
Ga0126372_108994132	3300010360	Tropical Forest Soil	MAPRDKPTDYEQLVALATRVDQLLRELERWLHVRERLAAKGGARIVETTWRRRRLAISRHSQALMAALLRDVEL*
Ga0126379_113291931	3300010366	Tropical Forest Soil	VVTPEQPTEYEELIALASRVEQLLRELDAWLHVRERTAAVGGERGPEQTWRRRRLAIARHTQALMLALLRDVEL*
Ga0126381_1027798881	3300010376	Tropical Forest Soil	MELPDQPTEYEQLVALASRVDQLLGELEGWLHVRERHAAKGGARAMEKVWRSRRLAIVRHSQAILAALLRDVEL*
Ga0126381_1034156852	3300010376	Tropical Forest Soil	MKPRDKPTEYEQLVALASRVDQLLRELERWLHVRERIAAKGGARIVETSWRRRRLAIVRHSQALMAALLRDVEL*
Ga0105246_104972503	3300011119	Miscanthus Rhizosphere	VKPFEHATEYEQLVALASRVDALLHELDTWLHARERSASMAGMRDLQYDWRRRRLTILRHSQALLAALLRDVEL
Ga0137392_101594402	3300011269	Vadose Zone Soil	VKPLEHATEYEQLVALASRVDELLRELETWLHARERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137391_100954521	3300011270	Vadose Zone Soil	VKPLEHATEYEQLVALASRVDELLRELETWLHARERSASTAGSRDRQNDWRRRRLTILRHSQALLA
Ga0137393_101446271	3300011271	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELENWLHTRERSASTAGSRDSQHDWRRRRLTILRHSQALLAALLRDVEL*
Ga0120114_11190481	3300011998	Permafrost	VEHHDHATEYEQLVALASRVDQLLRELETWLHARERCASTAGGRELEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0120159_10551391	3300012014	Permafrost	ASRVDQLLRELETWLHARERGASTAGGREQEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0137389_109974612	3300012096	Vadose Zone Soil	EYEQLVALASRVDAVLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137388_109011531	3300012189	Vadose Zone Soil	VKPLEHATEYEQLVALASRVDELLRELETWLHARERSASTAGTRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137383_105258052	3300012199	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDALLHELETWLHARERSASTAGIRDLQYDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137365_101824992	3300012201	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDALLRELETWLHARERSASTAGIRDLQYDWRHRRLTILRHSQALLAALLRDVEL*
Ga0137374_100325325	3300012204	Vadose Zone Soil	VEPLDHATQYEQLVALASRVDQLLGELETWLHARERGASTARDRDVELGWRRRRLMIVKQSQALLAALLCDVEL*
Ga0137362_111235401	3300012205	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHARERSATTVGTRDRHNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137380_105826951	3300012206	Vadose Zone Soil	VKPLEQATEYEQLVALASRVDELLRELETWQHARERNASTAGTRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137381_106427481	3300012207	Vadose Zone Soil	LETWLRTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137376_109284421	3300012208	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDALLHELETWLHARERSASTAGVRDLQYDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137378_107027121	3300012210	Vadose Zone Soil	LRELETWLHARERGASTAAGNGSGNGNRQHDWRRRRLAILRYSRALLDALLRDVEL*
Ga0137372_109440962	3300012350	Vadose Zone Soil	VEPLDHATQYEQLVALASRVDQLLGELETWLHARERGAAAARDRDVELGWRRRRLMIVKQAQALLAALLCDVEL*
Ga0137371_107837541	3300012356	Vadose Zone Soil	ALLHELETWLHARERSASTAGIRDLQYDWRHRRLTILRHSQALLAALLRDVEL*
Ga0137384_109441032	3300012357	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELEAWLRTRERTASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137385_102073962	3300012359	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDALLHELETWLHARERSASTAGIRNLQYDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137385_106599672	3300012359	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERNASTAGSRDLRNDWGRRRLTILRHSQALLAALLREVEL*
Ga0137361_111924842	3300012362	Vadose Zone Soil	RVDELLRELETWLRTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137390_119341591	3300012363	Vadose Zone Soil	LASRVDELLRELETWLHTRERSASNAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL*
Ga0137359_110064672	3300012923	Vadose Zone Soil	ELLRELETWLHTRERSASTAGSRDLQNDWRGRRLTILRHSQALLAALLRDVEL*
Ga0120123_11636131	3300013770	Permafrost	VEPLDHATEYEQLVALASRVDQLLRELETWLHARERGASTAGGREQEHNWRRRRLAIVRHSQALLGALLKL*
Ga0120158_101925302	3300013772	Permafrost	VEHLDHATEYEQLVALASRVDQLLRELETWLHARERGTSAAAGREAEYNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0120125_10474952	3300014056	Permafrost	MEPLDHATEYEQLVALASRVDQVLRELETWLHARERGAATAAGREMEHNWRRRRLAIVRHSQALLGALLRDVEL*
Ga0182008_100768322	3300014497	Rhizosphere	VEPQPGPSEYEQLVALASRVEQVLRELESWLHVRERAAVKMGARNREDDWRRRRLTILRHSQALLAALLRDVEL*
Ga0134073_100312432	3300015356	Grasslands Soil	VEPLDHATEYEQLVVLASRVDELLRELETWLHARERGASTDGAGDRQHDWRRRRLAILRHSQALLAALLRDVEL*
Ga0134073_101468482	3300015356	Grasslands Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDRQTDWRRRRLTILRHSQALLAALLRDVEL*
Ga0132258_130087631	3300015371	Arabidopsis Rhizosphere	PLHGASDYEQLVGLASRVDQLLRELESWLHARERAASTVGARDRQHDWRRRRLTILRHSQALLAALLRDVEL*
Ga0066667_106090602	3300018433	Grasslands Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDLQNDWRRRRLTILRHSQALLAALLRDVEL
Ga0066669_107384312	3300018482	Grasslands Soil	VKPFEQATEYEQLVALASRVDALLHELETWLHARERSASTAGIRDLQYDWRRRRLTILRHSQALLAALLRDVEL
Ga0213882_100682761	3300021362	Exposed Rock	VLPHEASSEYEQLVALASRVDQLLRELEVWLHARERVAARAGPRARQDDWRRRRLAILRHSQALMAALLRDIDV
Ga0213876_101227812	3300021384	Plant Roots	ASSEYEQLVALASRVDQLLRELEVWLHARERVAARAGPRARQDDWRRRRLAILRHSQALMAALLRDIDV
Ga0207692_108013051	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VEPSDRGSDYEQLIGLASRVDQLLRELETWLRARERAALITGARDRQHDWRRRRMTILRHSQALLAALLRDVEL
Ga0207684_103292882	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRELHIQIQSRRVISECVEPLPGASDYEQLIGLASRVDQVLRELETWLHARERAASTAGTRDRQHDWRRRRLTILRHSQALLAALLRDVEL
Ga0207684_105803022	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKPFEQATEYEQLVALASRVDELLRELETWLHMRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL
Ga0207700_105701322	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VVPPEQPTEYEQLVALASRVDQLLRELEAWLHVRERTAAVGGERGPEQTWRRRRLAIARQTEALMAALLRDVEL
Ga0207700_114488351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEHFDHASEYEQLVALASRVDQLLRELETWLHTRERGASTAGVREQERQWRRRRLAIVRHSQALLGALLRDIEL
Ga0209160_11185542	3300026532	Soil	DPHDHPSEYEQLVALASRVDQLAREVETWLHLRERGAATAGARDSQRDWRRRRLAILRHSQALLTALLGDVEL
Ga0209474_106297681	3300026550	Soil	VKPFEQATEYEQLVALASRVDELLRELETWLRTRERSASTAGSRDRQTDWRRRRLTILRHSQALLAALLRDVEL
Ga0209580_101351831	3300027842	Surface Soil	VSECVEPLRSASDYEQLIGLASRVEQLLGELETWLHARERAASTVGARDRQHDWRRRRLTILRHSQALLAALLRDVEL
Ga0209166_101461632	3300027857	Surface Soil	MEPLRGASDYEQLIGLASRVDQLLRELEAWLHARERAASTSGAHDRQHDWRRRRMATLRHSQALLAALLRDVEL
Ga0209166_101507462	3300027857	Surface Soil	VKPFEQATEYEQLVALASRVDEVLRELETWLHTRERSASTAGSRDRQSDWRRRRLAILRHSQALLAALLRDVEL
Ga0209465_105482102	3300027874	Tropical Forest Soil	NVGKPEWSRRLQPTEYEELIALASRVEQLLRELDAWLHVRERTAAVGGERGPEQTWRRRRLAIARHTQALMLALLRDVEL
Ga0209283_107817572	3300027875	Vadose Zone Soil	ALASRVDELLRELETWLHARERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDVEL
Ga0209590_107627633	3300027882	Vadose Zone Soil	VKPFEQATEYEQLVALASRVDELLRELETWLHTRERSASTAGSRDRQNDWRRRRLTILRHSQALLAALLRDV
Ga0307312_102805872	3300028828	Soil	VKPEQATEYEQLVALASRVDALLHELETWLHARERSASTAGIRDLQYDWRRRRLTILRHSQALLAALLRDVEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F095193

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences