NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095165

Metagenome Family F095165

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095165
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 50 residues
Representative Sequence MTSNYSPQNDFPDNDDWDYIFKLMILIALLIVALAVALIVLTPEIFNYLINL
Number of Associated Samples 57
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 35.24 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 40
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(61.905 % of family members)
Environment Ontology (ENVO) Unclassified
(77.143 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(74.286 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 63.46%    β-sheet: 0.00%    Coil/Unstructured: 36.54%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF08299Bac_DnaA_C 43.81
PF01555N6_N4_Mtase 8.57
PF13455MUG113 8.57
PF10544T5orf172 2.86
PF04098Rad52_Rad22 1.90
PF03837RecT 1.90
PF03819MazG 1.90
PF03869Arc 0.95
PF04851ResIII 0.95
PF00271Helicase_C 0.95
PF00303Thymidylat_synt 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 43.81
COG0863DNA modification methylaseReplication, recombination and repair [L] 8.57
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 8.57
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 8.57
COG3723Recombinational DNA repair protein RecTReplication, recombination and repair [L] 1.90
COG0207Thymidylate synthaseNucleotide transport and metabolism [F] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.67 %
All OrganismsrootAll Organisms33.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10022217All Organisms → Viruses → Predicted Viral3075Open in IMG/M
3300000116|DelMOSpr2010_c10069768All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1434Open in IMG/M
3300005346|Ga0074242_10460124Not Available1283Open in IMG/M
3300005613|Ga0074649_1036354Not Available2357Open in IMG/M
3300005613|Ga0074649_1063613All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1508Open in IMG/M
3300006025|Ga0075474_10002097All Organisms → Viruses8405Open in IMG/M
3300006027|Ga0075462_10145505Not Available725Open in IMG/M
3300006027|Ga0075462_10197054Not Available606Open in IMG/M
3300006029|Ga0075466_1155992Not Available585Open in IMG/M
3300006802|Ga0070749_10203069All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides fragilis1135Open in IMG/M
3300006802|Ga0070749_10246865Not Available1012Open in IMG/M
3300006802|Ga0070749_10334112Not Available844Open in IMG/M
3300006802|Ga0070749_10534323All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300006802|Ga0070749_10724782Not Available530Open in IMG/M
3300006810|Ga0070754_10135691Not Available1187Open in IMG/M
3300006810|Ga0070754_10225142Not Available865Open in IMG/M
3300006810|Ga0070754_10323039Not Available688Open in IMG/M
3300006810|Ga0070754_10521463Not Available510Open in IMG/M
3300006916|Ga0070750_10001729Not Available12172Open in IMG/M
3300006916|Ga0070750_10125892All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides fragilis1172Open in IMG/M
3300006916|Ga0070750_10263364Not Available745Open in IMG/M
3300006919|Ga0070746_10417827Not Available599Open in IMG/M
3300006920|Ga0070748_1119217Not Available995Open in IMG/M
3300007344|Ga0070745_1168441Not Available822Open in IMG/M
3300007346|Ga0070753_1021677Not Available2838Open in IMG/M
3300007346|Ga0070753_1289529Not Available587Open in IMG/M
3300007538|Ga0099851_1014307All Organisms → cellular organisms → Bacteria3235Open in IMG/M
3300007538|Ga0099851_1029409All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter psychrophilus2204Open in IMG/M
3300007538|Ga0099851_1032742Not Available2075Open in IMG/M
3300007538|Ga0099851_1087452All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1196Open in IMG/M
3300007538|Ga0099851_1157210Not Available844Open in IMG/M
3300007539|Ga0099849_1162251Not Available859Open in IMG/M
3300007540|Ga0099847_1069543All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1091Open in IMG/M
3300007540|Ga0099847_1078424All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1018Open in IMG/M
3300007542|Ga0099846_1050951Not Available1569Open in IMG/M
3300007542|Ga0099846_1097311Not Available1085Open in IMG/M
3300007542|Ga0099846_1163693Not Available796Open in IMG/M
3300007542|Ga0099846_1288518Not Available564Open in IMG/M
3300007640|Ga0070751_1063230Not Available1590Open in IMG/M
3300007640|Ga0070751_1223777Not Available723Open in IMG/M
3300007960|Ga0099850_1075642Not Available1408Open in IMG/M
3300007960|Ga0099850_1407204Not Available503Open in IMG/M
3300009079|Ga0102814_10796840Not Available522Open in IMG/M
3300009149|Ga0114918_10358790All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage802Open in IMG/M
3300009149|Ga0114918_10464031Not Available682Open in IMG/M
3300009149|Ga0114918_10719224All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum523Open in IMG/M
3300009495|Ga0115571_1101594All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1246Open in IMG/M
3300010316|Ga0136655_1245750Not Available533Open in IMG/M
3300010368|Ga0129324_10175822Not Available880Open in IMG/M
3300017697|Ga0180120_10178802All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage888Open in IMG/M
3300017697|Ga0180120_10186102All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage866Open in IMG/M
3300017697|Ga0180120_10205661Not Available814Open in IMG/M
3300017697|Ga0180120_10363070Not Available572Open in IMG/M
3300021378|Ga0213861_10025992All Organisms → cellular organisms → Bacteria4028Open in IMG/M
3300021378|Ga0213861_10505462Not Available572Open in IMG/M
3300021389|Ga0213868_10182079Not Available1274Open in IMG/M
3300022050|Ga0196883_1000013Not Available19228Open in IMG/M
3300022053|Ga0212030_1018988Not Available917Open in IMG/M
3300022053|Ga0212030_1025202Not Available814Open in IMG/M
3300022063|Ga0212029_1035478Not Available707Open in IMG/M
3300022065|Ga0212024_1009972All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides fragilis1403Open in IMG/M
3300022068|Ga0212021_1004873All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides → Bacteroides fragilis1994Open in IMG/M
3300022169|Ga0196903_1000388Not Available6786Open in IMG/M
3300022200|Ga0196901_1034101All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1973Open in IMG/M
3300022200|Ga0196901_1086607Not Available1109Open in IMG/M
3300022200|Ga0196901_1195175Not Available652Open in IMG/M
(restricted) 3300023210|Ga0233412_10151749Not Available993Open in IMG/M
(restricted) 3300024059|Ga0255040_10201122Not Available816Open in IMG/M
(restricted) 3300024062|Ga0255039_10027660All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2052Open in IMG/M
3300024262|Ga0210003_1063048All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1821Open in IMG/M
3300024262|Ga0210003_1102118Not Available1302Open in IMG/M
(restricted) 3300024519|Ga0255046_10283011Not Available771Open in IMG/M
3300025543|Ga0208303_1005265All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4439Open in IMG/M
3300025543|Ga0208303_1014177All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2383Open in IMG/M
3300025543|Ga0208303_1045258All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1094Open in IMG/M
3300025543|Ga0208303_1062949Not Available865Open in IMG/M
3300025543|Ga0208303_1073456Not Available773Open in IMG/M
3300025626|Ga0209716_1172891Not Available540Open in IMG/M
3300025647|Ga0208160_1010421All Organisms → cellular organisms → Bacteria3163Open in IMG/M
3300025647|Ga0208160_1021151All Organisms → Viruses → Predicted Viral2059Open in IMG/M
3300025647|Ga0208160_1024897Not Available1858Open in IMG/M
3300025655|Ga0208795_1021260All Organisms → cellular organisms → Bacteria2132Open in IMG/M
3300025759|Ga0208899_1001098Not Available19320Open in IMG/M
3300025759|Ga0208899_1042426All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2016Open in IMG/M
3300025759|Ga0208899_1207573Not Available617Open in IMG/M
3300025769|Ga0208767_1080767Not Available1369Open in IMG/M
3300025853|Ga0208645_1010045All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes5884Open in IMG/M
3300025853|Ga0208645_1167463Not Available815Open in IMG/M
3300025889|Ga0208644_1108775Not Available1347Open in IMG/M
3300027917|Ga0209536_100833125Not Available1142Open in IMG/M
(restricted) 3300027996|Ga0233413_10128374Not Available1039Open in IMG/M
3300029308|Ga0135226_1007606Not Available780Open in IMG/M
3300031539|Ga0307380_10496358Not Available1074Open in IMG/M
3300031539|Ga0307380_10641940All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage905Open in IMG/M
3300031539|Ga0307380_10852806Not Available745Open in IMG/M
3300031565|Ga0307379_10487807Not Available1156Open in IMG/M
3300031578|Ga0307376_10071657Not Available2476Open in IMG/M
3300031669|Ga0307375_10195449All Organisms → cellular organisms → Bacteria1363Open in IMG/M
3300031669|Ga0307375_10306165Not Available1017Open in IMG/M
3300031669|Ga0307375_10533789Not Available701Open in IMG/M
3300031673|Ga0307377_10178195All Organisms → cellular organisms → Bacteria1667Open in IMG/M
3300031673|Ga0307377_10495566Not Available890Open in IMG/M
3300031673|Ga0307377_10534493All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Tenacibaculum848Open in IMG/M
3300034375|Ga0348336_151129Not Available690Open in IMG/M
3300034418|Ga0348337_136162Not Available722Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous61.90%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil10.48%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient5.71%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface4.76%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.86%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.86%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment2.86%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.90%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine1.90%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.90%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.95%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.95%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300005346Saline sediment microbial community from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024062 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024519 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300027996 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_6_MGEnvironmentalOpen in IMG/M
3300029308Marine harbor viral communities from the Indian Ocean - SRB2EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1002221733300000116MarineMASNYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLINL*
DelMOSpr2010_1006976833300000116MarineMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL*
Ga0074242_1046012423300005346Saline Water And SedimentMITNYSPENNFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITL*
Ga0074649_103635433300005613Saline Water And SedimentMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0074649_106361323300005613Saline Water And SedimentMITNYSPENNFPNNDDWDYIFKLMIVIAVLITLLAFALIFLTPEIFNYLITL*
Ga0075474_1000209783300006025AqueousMTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL*
Ga0075462_1014550523300006027AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0075462_1019705423300006027AqueousMTSNYSPQNDFPNNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL*
Ga0075466_115599223300006029AqueousMTSNYSPQNDFPDNDDWDYIFKLMITISILIVALAVALIVLTPEIFNYLITL*
Ga0070749_1020306933300006802AqueousQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR*
Ga0070749_1024686533300006802AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL*
Ga0070749_1033411233300006802AqueousMASNYSPQNDFPDNDDWDYIFKLMITILLLIVALTVALIATPEIFNYLITL*
Ga0070749_1053432323300006802AqueousMTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL*
Ga0070749_1072478223300006802AqueousQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0070754_1013569123300006810AqueousMTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIGLTPEIFNYLINL*
Ga0070754_1022514233300006810AqueousMITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL*
Ga0070754_1032303923300006810AqueousMTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL*
Ga0070754_1052146313300006810AqueousFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0070750_10001729183300006916AqueousMISNYSPQNDFPNNDDWDYLFKLMILIALLITLFAVAIILLTPEIFNYLITL*
Ga0070750_1012589233300006916AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR*
Ga0070750_1026336413300006916AqueousDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLITL*
Ga0070746_1041782723300006919AqueousMITNYSTQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0070748_111921733300006920AqueousMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALIVLTPEIFNYLINL*
Ga0070745_116844123300007344AqueousMITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0070753_102167713300007346AqueousISMTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL*
Ga0070753_128952913300007346AqueousNISMTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL*
Ga0099851_101430723300007538AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALILLTPEIFNYLITL*
Ga0099851_102940953300007538AqueousPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL*
Ga0099851_103274233300007538AqueousMITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL*
Ga0099851_108745243300007538AqueousDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN*
Ga0099851_115721033300007538AqueousMTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL*
Ga0099849_116225123300007539AqueousMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL*
Ga0099847_106954333300007540AqueousPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN*
Ga0099847_107842413300007540AqueousFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLITLKIN*
Ga0099846_105095113300007542AqueousKMITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL*
Ga0099846_109731113300007542AqueousPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL*
Ga0099846_116369333300007542AqueousMITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFN
Ga0099846_128851823300007542AqueousMTSNYSPQKDFPDNDDWDYIFKLMILIALLITALAVALILLTPEIFNYLINL*
Ga0070751_106323043300007640AqueousMTSNYSPQNDFPDNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL*
Ga0070751_122377713300007640AqueousMITNYSTQNDFPNNDDWDYIFKLMITISLLIVSLAVALIVLTPEIFNYLINL*
Ga0099850_107564233300007960AqueousMTSNYSPQNDFPDNNDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL*
Ga0099850_140720423300007960AqueousLKNYKMITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL*
Ga0102814_1079684023300009079EstuarineMINNYSTENDFPNNDDWDYIFKLMITILLLIVALSVALIVLTPEIFNYLITL*
Ga0114918_1035879013300009149Deep SubsurfaceNDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN*
Ga0114918_1046403123300009149Deep SubsurfaceMISNYSPENDFPNNDDWDFVFKLLILLAILIAALAFATIILTPEIFNYLINL*
Ga0114918_1071922413300009149Deep SubsurfacePENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITLKL*
Ga0115571_110159423300009495Pelagic MarineMINNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL*
Ga0136655_124575023300010316Freshwater To Marine Saline GradientILINILMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALILLTPEIFNYLINL*
Ga0129324_1017582223300010368Freshwater To Marine Saline GradientMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAFALILLTPEIFNYLINL*
Ga0180120_1017880213300017697Freshwater To Marine Saline GradientMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAV
Ga0180120_1018610213300017697Freshwater To Marine Saline GradientPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN
Ga0180120_1020566133300017697Freshwater To Marine Saline GradientMTSNYSPQKDFPNNEDWDYIFKLMILIALLITALAVALILLTPEIFNYLINL
Ga0180120_1036307033300017697Freshwater To Marine Saline GradientPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
Ga0213861_1002599273300021378SeawaterMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLINL
Ga0213861_1050546223300021378SeawaterMTSNYSPQNDFPNNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLITLKIN
Ga0213868_1018207943300021389SeawaterMTSNYSPQNDFPDNDDWDYIFKLMILIALLIVALAVALIVLTPEIFNYLINL
Ga0196883_1000013103300022050AqueousMTSNYSPQNDFPNNEDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL
Ga0212030_101898833300022053AqueousMITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL
Ga0212030_102520223300022053AqueousMTSNYSPQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL
Ga0212029_103547823300022063AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
Ga0212024_100997243300022065AqueousSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR
Ga0212021_100487333300022068AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYIKNLILR
Ga0196903_1000388163300022169AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALILLTPEIFNYLITL
Ga0196901_103410163300022200AqueousMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN
Ga0196901_108660733300022200AqueousMTSNYSPQKDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL
Ga0196901_119517533300022200AqueousSNYSPQNDFPDNNDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
(restricted) Ga0233412_1015174933300023210SeawaterMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
(restricted) Ga0255040_1020112233300024059SeawaterMTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL
(restricted) Ga0255039_1002766033300024062SeawaterMTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL
Ga0210003_106304833300024262Deep SubsurfaceMISNYTPENDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN
Ga0210003_110211823300024262Deep SubsurfaceMISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL
(restricted) Ga0255046_1028301123300024519SeawaterMISNYSPQNDFPNNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL
Ga0208303_100526553300025543AqueousMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN
Ga0208303_101417733300025543AqueousMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
Ga0208303_104525813300025543AqueousNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLITLKIN
Ga0208303_106294913300025543AqueousNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL
Ga0208303_107345633300025543AqueousMTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLI
Ga0209716_117289123300025626Pelagic MarineMINNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL
Ga0208160_101042163300025647AqueousKLLTILINISMTSKYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN
Ga0208160_102115143300025647AqueousMTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAIALIVLTPEIFNYLINL
Ga0208160_102489753300025647AqueousITNYSTQNDFPDNDDWDYIFKLMITISLLIVALTVALIATPEIFNYLITL
Ga0208795_102126023300025655AqueousMTSNYSPQKDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLITLKIN
Ga0208899_1001098273300025759AqueousMISNYSPQNDFPNNDDWDYLFKLMILIALLITLFAVAIILLTPEIFNYLITL
Ga0208899_104242653300025759AqueousDYIFKLMITISLLIVALAVALIVLTPEIFNYLITL
Ga0208899_120757323300025759AqueousMTSNYSPQNDFPDNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLINL
Ga0208767_108076733300025769AqueousMITNYSTQNDFPNNDDWDYIFKLMILIALLITSLAVALIVLTPEIFNYLINL
Ga0208645_101004543300025853AqueousMTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLITL
Ga0208645_116746333300025853AqueousMTSNYSPQNDFPDNDDWDYIFKLMILIALLITALAVALIVLTPEIFNYLINL
Ga0208644_110877523300025889AqueousMASNYSPQNDFPDNDDWDYIFKLMITILLLIVALTVALIATPEIFNYLITL
Ga0209536_10083312513300027917Marine SedimentNISMTSNYSPQNDFPDNDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL
(restricted) Ga0233413_1012837413300027996SeawaterDDWDFAFKLLILLAILIAALAFATIILTPEIFNYLINL
Ga0135226_100760633300029308Marine HarborMTSNYSPQNDFPNNDDWDFAFKLLILLAILIAALGFATIILTPEIFNYLITL
Ga0307380_1049635833300031539SoilQNDFPNNDDWDYIFKLMILIAILITLLSFALIFLTPEIFNYLINL
Ga0307380_1064194033300031539SoilMISNYSPQNDFPNNDDWDYIFKLMILIAFLITALAFALVFFSPEIYTYILTLITN
Ga0307380_1085280613300031539SoilISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPKIFNYLINL
Ga0307379_1048780733300031565SoilMISNYSPQNDFPNNDDWDYIFKLMILIAILITLLSFALIFLTPEIFNYLINL
Ga0307376_1007165743300031578SoilMISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLINL
Ga0307375_1019544913300031669SoilMISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLTP
Ga0307375_1030616533300031669SoilMISNYSPQNDFPNNDDWDFVFKLLILLAILIATLAFATIILTPEIFNYLINL
Ga0307375_1053378913300031669SoilSNYSPENDFPNNDDWDYIFKLMILISILITLLAFALIFLTPEIFNYLINL
Ga0307377_1017819543300031673SoilMISNYSPQNDFPNNDDWDYIFKLMILIAILITLLAFALIFLT
Ga0307377_1049556633300031673SoilMISNYSPENDFPNNDDWDYIFKLMILISILITLLAFALIFLTPEIFNYLINL
Ga0307377_1053449333300031673SoilMISNYSPENDFPNNDDWDYIFKLMILIAILITLLAFALIFLTPEIFNYLITLKL
Ga0348336_151129_538_6903300034375AqueousMITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVALIVLTPEIFNYLIN
Ga0348337_136162_610_7203300034418AqueousMITNYSTQNDFPNNDDWDYIFKLMITISLLIVALAVA


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