Basic Information | |
---|---|
Family ID | F095155 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 48 residues |
Representative Sequence | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK |
Number of Associated Samples | 48 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 53.40 % |
% of genes near scaffold ends (potentially truncated) | 50.48 % |
% of genes from short scaffolds (< 2000 bps) | 80.00 % |
Associated GOLD sequencing projects | 31 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Unclassified (49.524 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (57.143 % of family members) |
Environment Ontology (ENVO) | Unclassified (98.095 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (91.429 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 90.20% β-sheet: 0.00% Coil/Unstructured: 9.80% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 105 Family Scaffolds |
---|---|---|
PF13884 | Peptidase_S74 | 37.14 |
PF05106 | Phage_holin_3_1 | 3.81 |
PF11753 | DUF3310 | 1.90 |
PF07460 | NUMOD3 | 0.95 |
PF01555 | N6_N4_Mtase | 0.95 |
PF13539 | Peptidase_M15_4 | 0.95 |
PF05133 | Phage_prot_Gp6 | 0.95 |
PF05551 | zf-His_Me_endon | 0.95 |
PF00692 | dUTPase | 0.95 |
COG ID | Name | Functional Category | % Frequency in 105 Family Scaffolds |
---|---|---|---|
COG0717 | dCTP deaminase | Nucleotide transport and metabolism [F] | 0.95 |
COG0756 | dUTP pyrophosphatase (dUTPase) | Defense mechanisms [V] | 0.95 |
COG0863 | DNA modification methylase | Replication, recombination and repair [L] | 0.95 |
COG1041 | tRNA G10 N-methylase Trm11 | Translation, ribosomal structure and biogenesis [J] | 0.95 |
COG2189 | Adenine specific DNA methylase Mod | Replication, recombination and repair [L] | 0.95 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 50.48 % |
Unclassified | root | N/A | 49.52 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300000115|DelMOSum2011_c10022669 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium | 2935 | Open in IMG/M |
3300000115|DelMOSum2011_c10052220 | Not Available | 1603 | Open in IMG/M |
3300000115|DelMOSum2011_c10053732 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 1568 | Open in IMG/M |
3300000115|DelMOSum2011_c10089348 | Not Available | 1043 | Open in IMG/M |
3300000115|DelMOSum2011_c10204969 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 547 | Open in IMG/M |
3300001348|JGI20154J14316_10061175 | Not Available | 1484 | Open in IMG/M |
3300006029|Ga0075466_1000045 | Not Available | 35610 | Open in IMG/M |
3300006029|Ga0075466_1021858 | Not Available | 2063 | Open in IMG/M |
3300006029|Ga0075466_1024308 | All Organisms → Viruses → Predicted Viral | 1934 | Open in IMG/M |
3300006029|Ga0075466_1029176 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1733 | Open in IMG/M |
3300006029|Ga0075466_1124101 | Not Available | 682 | Open in IMG/M |
3300006029|Ga0075466_1165952 | Not Available | 561 | Open in IMG/M |
3300006029|Ga0075466_1173317 | Not Available | 545 | Open in IMG/M |
3300006029|Ga0075466_1176206 | All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium | 539 | Open in IMG/M |
3300006029|Ga0075466_1186395 | Not Available | 519 | Open in IMG/M |
3300006802|Ga0070749_10495034 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 666 | Open in IMG/M |
3300006803|Ga0075467_10004997 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group | 9645 | Open in IMG/M |
3300006803|Ga0075467_10173807 | All Organisms → Viruses → Predicted Viral | 1218 | Open in IMG/M |
3300006803|Ga0075467_10401253 | Not Available | 714 | Open in IMG/M |
3300006803|Ga0075467_10430665 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 684 | Open in IMG/M |
3300006803|Ga0075467_10591852 | Not Available | 567 | Open in IMG/M |
3300006920|Ga0070748_1363521 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 509 | Open in IMG/M |
3300007231|Ga0075469_10192588 | Not Available | 546 | Open in IMG/M |
3300007231|Ga0075469_10203668 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 528 | Open in IMG/M |
3300007276|Ga0070747_1092267 | Not Available | 1122 | Open in IMG/M |
3300007276|Ga0070747_1348197 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 506 | Open in IMG/M |
3300007538|Ga0099851_1152970 | Not Available | 858 | Open in IMG/M |
3300007540|Ga0099847_1159585 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 668 | Open in IMG/M |
3300007542|Ga0099846_1057237 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1471 | Open in IMG/M |
3300009074|Ga0115549_1033958 | Not Available | 1907 | Open in IMG/M |
3300009074|Ga0115549_1132125 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 819 | Open in IMG/M |
3300009074|Ga0115549_1258441 | Not Available | 551 | Open in IMG/M |
3300009074|Ga0115549_1263424 | Not Available | 545 | Open in IMG/M |
3300009423|Ga0115548_1057528 | All Organisms → cellular organisms → Bacteria | 1361 | Open in IMG/M |
3300009423|Ga0115548_1177231 | Not Available | 665 | Open in IMG/M |
3300009426|Ga0115547_1093381 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 997 | Open in IMG/M |
3300009435|Ga0115546_1066187 | Not Available | 1360 | Open in IMG/M |
3300009435|Ga0115546_1084649 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium | 1167 | Open in IMG/M |
3300009435|Ga0115546_1169968 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 762 | Open in IMG/M |
3300009788|Ga0114923_10512951 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pseudoalteromonas phage H105/1 | 894 | Open in IMG/M |
3300010316|Ga0136655_1042145 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas | 1446 | Open in IMG/M |
3300010316|Ga0136655_1210419 | Not Available | 579 | Open in IMG/M |
3300010316|Ga0136655_1267086 | Not Available | 509 | Open in IMG/M |
3300013010|Ga0129327_10091057 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 1503 | Open in IMG/M |
3300013010|Ga0129327_10509866 | Not Available | 653 | Open in IMG/M |
3300013010|Ga0129327_10563984 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 624 | Open in IMG/M |
3300017697|Ga0180120_10076360 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1480 | Open in IMG/M |
3300017697|Ga0180120_10453883 | Not Available | 500 | Open in IMG/M |
3300020166|Ga0206128_1026475 | Not Available | 3165 | Open in IMG/M |
3300020182|Ga0206129_10029467 | All Organisms → Viruses → Predicted Viral | 3941 | Open in IMG/M |
3300020182|Ga0206129_10308533 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 634 | Open in IMG/M |
3300021085|Ga0206677_10012442 | Not Available | 5702 | Open in IMG/M |
3300021185|Ga0206682_10015748 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 5035 | Open in IMG/M |
3300021185|Ga0206682_10044606 | All Organisms → Viruses → Predicted Viral | 2475 | Open in IMG/M |
3300022053|Ga0212030_1002126 | Not Available | 1933 | Open in IMG/M |
3300022053|Ga0212030_1022268 | Not Available | 858 | Open in IMG/M |
3300022061|Ga0212023_1000312 | Not Available | 3871 | Open in IMG/M |
3300022061|Ga0212023_1000751 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 2893 | Open in IMG/M |
3300022061|Ga0212023_1000876 | All Organisms → Viruses | 2751 | Open in IMG/M |
3300022061|Ga0212023_1001400 | Not Available | 2367 | Open in IMG/M |
3300022061|Ga0212023_1008500 | All Organisms → Viruses → Predicted Viral | 1286 | Open in IMG/M |
3300022061|Ga0212023_1029959 | Not Available | 752 | Open in IMG/M |
3300022061|Ga0212023_1041581 | Not Available | 639 | Open in IMG/M |
3300022061|Ga0212023_1042986 | Not Available | 628 | Open in IMG/M |
3300022061|Ga0212023_1046203 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 606 | Open in IMG/M |
3300022061|Ga0212023_1058238 | Not Available | 536 | Open in IMG/M |
3300022063|Ga0212029_1007596 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | 1266 | Open in IMG/M |
3300022072|Ga0196889_1013842 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | 1737 | Open in IMG/M |
3300022072|Ga0196889_1015809 | Not Available | 1608 | Open in IMG/M |
3300022164|Ga0212022_1008229 | Not Available | 1421 | Open in IMG/M |
3300022164|Ga0212022_1029936 | Not Available | 833 | Open in IMG/M |
3300022164|Ga0212022_1063583 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 569 | Open in IMG/M |
3300022169|Ga0196903_1028953 | Not Available | 657 | Open in IMG/M |
3300022200|Ga0196901_1040754 | Not Available | 1770 | Open in IMG/M |
3300022200|Ga0196901_1048262 | Not Available | 1598 | Open in IMG/M |
3300022200|Ga0196901_1048807 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1587 | Open in IMG/M |
3300025508|Ga0208148_1011272 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 2723 | Open in IMG/M |
3300025508|Ga0208148_1058288 | Not Available | 930 | Open in IMG/M |
3300025508|Ga0208148_1077757 | Not Available | 755 | Open in IMG/M |
3300025543|Ga0208303_1048889 | All Organisms → cellular organisms → Bacteria | 1036 | Open in IMG/M |
3300025543|Ga0208303_1056829 | Not Available | 930 | Open in IMG/M |
3300025543|Ga0208303_1057789 | Not Available | 919 | Open in IMG/M |
3300025543|Ga0208303_1102650 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 602 | Open in IMG/M |
3300025577|Ga0209304_1010542 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 3419 | Open in IMG/M |
3300025577|Ga0209304_1020965 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 2081 | Open in IMG/M |
3300025594|Ga0209094_1076701 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 799 | Open in IMG/M |
3300025632|Ga0209194_1037135 | Not Available | 1487 | Open in IMG/M |
3300025645|Ga0208643_1020074 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 2352 | Open in IMG/M |
3300025645|Ga0208643_1154485 | Not Available | 578 | Open in IMG/M |
3300025647|Ga0208160_1031779 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 1595 | Open in IMG/M |
3300025806|Ga0208545_1073184 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 952 | Open in IMG/M |
3300025874|Ga0209533_1188350 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 882 | Open in IMG/M |
3300025887|Ga0208544_10032853 | Not Available | 2642 | Open in IMG/M |
3300025887|Ga0208544_10326186 | Not Available | 591 | Open in IMG/M |
3300027672|Ga0209383_1202855 | Not Available | 576 | Open in IMG/M |
(restricted) 3300027861|Ga0233415_10007804 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | 4262 | Open in IMG/M |
3300028123|Ga0256372_1020341 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Shewanella phage SppYZU01 | 759 | Open in IMG/M |
3300031167|Ga0308023_1074946 | Not Available | 633 | Open in IMG/M |
3300031599|Ga0308007_10188215 | Not Available | 722 | Open in IMG/M |
3300031599|Ga0308007_10247456 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 606 | Open in IMG/M |
3300031658|Ga0307984_1084965 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5 | 936 | Open in IMG/M |
3300031658|Ga0307984_1159846 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 627 | Open in IMG/M |
3300031659|Ga0307986_10207490 | All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes | 872 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 57.14% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 13.33% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 7.62% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 5.71% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 4.76% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 2.86% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 2.86% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 1.90% |
Deep Subsurface | Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface | 0.95% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.95% |
Sea-Ice Brine | Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine | 0.95% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.95% |
Visualization |
---|
Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000115 | Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011 | Environmental | Open in IMG/M |
3300001348 | Pelagic Microbial community sample from North Sea - COGITO 998_met_04 | Environmental | Open in IMG/M |
3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
3300006803 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300007231 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNA | Environmental | Open in IMG/M |
3300007276 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 | Environmental | Open in IMG/M |
3300007538 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG | Environmental | Open in IMG/M |
3300007540 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG | Environmental | Open in IMG/M |
3300007542 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG | Environmental | Open in IMG/M |
3300009074 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 | Environmental | Open in IMG/M |
3300009423 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 | Environmental | Open in IMG/M |
3300009426 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 | Environmental | Open in IMG/M |
3300009435 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 | Environmental | Open in IMG/M |
3300009788 | Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG | Environmental | Open in IMG/M |
3300010316 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA | Environmental | Open in IMG/M |
3300013010 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA | Environmental | Open in IMG/M |
3300017697 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2) | Environmental | Open in IMG/M |
3300020166 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1 | Environmental | Open in IMG/M |
3300020182 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2 | Environmental | Open in IMG/M |
3300021085 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015 | Environmental | Open in IMG/M |
3300021185 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 | Environmental | Open in IMG/M |
3300022053 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2) | Environmental | Open in IMG/M |
3300022061 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2) | Environmental | Open in IMG/M |
3300022063 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2) | Environmental | Open in IMG/M |
3300022072 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3) | Environmental | Open in IMG/M |
3300022164 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2) | Environmental | Open in IMG/M |
3300022169 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3) | Environmental | Open in IMG/M |
3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
3300022200 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3) | Environmental | Open in IMG/M |
3300025508 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025543 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025577 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes) | Environmental | Open in IMG/M |
3300025594 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes) | Environmental | Open in IMG/M |
3300025632 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes) | Environmental | Open in IMG/M |
3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
3300025647 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025806 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025874 | Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes) | Environmental | Open in IMG/M |
3300025887 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300027672 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes) | Environmental | Open in IMG/M |
3300027861 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG | Environmental | Open in IMG/M |
3300028123 | Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SI3L | Environmental | Open in IMG/M |
3300031167 | Marine microbial communities from water near the shore, Antarctic Ocean - #418 | Environmental | Open in IMG/M |
3300031599 | Marine microbial communities from water near the shore, Antarctic Ocean - #71 | Environmental | Open in IMG/M |
3300031658 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78 | Environmental | Open in IMG/M |
3300031659 | Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82 | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2011_100226694 | 3300000115 | Marine | VESVSLLELIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
DelMOSum2011_100522204 | 3300000115 | Marine | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
DelMOSum2011_100537322 | 3300000115 | Marine | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
DelMOSum2011_100893483 | 3300000115 | Marine | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
DelMOSum2011_102049692 | 3300000115 | Marine | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYN |
JGI20154J14316_100611755 | 3300001348 | Pelagic Marine | RALMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_100004545 | 3300006029 | Aqueous | MTDYKFIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNRRDN* |
Ga0075466_10218582 | 3300006029 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_10243083 | 3300006029 | Aqueous | VSLLEVIPAIWPVAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_10291764 | 3300006029 | Aqueous | MGDVSILEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDKK* |
Ga0075466_11241012 | 3300006029 | Aqueous | VSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_11659521 | 3300006029 | Aqueous | MNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDL |
Ga0075466_11733172 | 3300006029 | Aqueous | VESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_11762062 | 3300006029 | Aqueous | MTSASFLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075466_11863952 | 3300006029 | Aqueous | VSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0070749_104950342 | 3300006802 | Aqueous | MGDVSILEIIPAIWPIAVGFVDLIFWLAKSYADIETLKEKVKVLYDLYNKDKK* |
Ga0075467_1000499713 | 3300006803 | Aqueous | MTDYKFIELIAALWPLIVAFVGLIFWLAKSYADTETLKEKVKVLYDLYNRRDN* |
Ga0075467_101738071 | 3300006803 | Aqueous | MESVSLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075467_104012533 | 3300006803 | Aqueous | MNLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075467_104306652 | 3300006803 | Aqueous | MKSVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0075467_105918521 | 3300006803 | Aqueous | MNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLY |
Ga0070748_13635211 | 3300006920 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIET |
Ga0075469_101925883 | 3300007231 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKV |
Ga0075469_102036682 | 3300007231 | Aqueous | MESASLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV |
Ga0070747_10922671 | 3300007276 | Aqueous | MNILEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK |
Ga0070747_13481972 | 3300007276 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK |
Ga0099851_11529702 | 3300007538 | Aqueous | MTDNFSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKRDN* |
Ga0099847_11471541 | 3300007540 | Aqueous | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEK |
Ga0099847_11595853 | 3300007540 | Aqueous | MNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLY |
Ga0099846_10572371 | 3300007542 | Aqueous | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLY |
Ga0115549_10339582 | 3300009074 | Pelagic Marine | MNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0115549_11321251 | 3300009074 | Pelagic Marine | MESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETL |
Ga0115549_12584411 | 3300009074 | Pelagic Marine | MPWLDIISALWPVAVGFATLIFWLDKSYADSEVLKDKVRVLYELHNNKDNS* |
Ga0115549_12634243 | 3300009074 | Pelagic Marine | LEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0115548_10575281 | 3300009423 | Pelagic Marine | MNDYNVIELIAGLLPLIVAFVGLIFWLAKSYADIETLKEKVKVLY |
Ga0115548_11772313 | 3300009423 | Pelagic Marine | MKSVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0115547_10933812 | 3300009426 | Pelagic Marine | MESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0115546_10661872 | 3300009435 | Pelagic Marine | MEYVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0115546_10846494 | 3300009435 | Pelagic Marine | MPWLDIISALWPLAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNNKDNS* |
Ga0115546_11699683 | 3300009435 | Pelagic Marine | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYN |
Ga0114923_105129513 | 3300009788 | Deep Subsurface | MEILEVISALWPILIGIIGLIFWLAKSYADIETLKDKVKTLY |
Ga0136655_10421451 | 3300010316 | Freshwater To Marine Saline Gradient | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYD |
Ga0136655_12104191 | 3300010316 | Freshwater To Marine Saline Gradient | IPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN* |
Ga0136655_12670861 | 3300010316 | Freshwater To Marine Saline Gradient | MKSVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDL |
Ga0129327_100910571 | 3300013010 | Freshwater To Marine Saline Gradient | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDL |
Ga0129327_105098662 | 3300013010 | Freshwater To Marine Saline Gradient | MQTLLDLWPIIVAVIGLVFWLSKSHADIETLKEKVKVLFEMANRK* |
Ga0129327_105639841 | 3300013010 | Freshwater To Marine Saline Gradient | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDL |
Ga0180120_100763603 | 3300017697 | Freshwater To Marine Saline Gradient | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKV |
Ga0180120_104538831 | 3300017697 | Freshwater To Marine Saline Gradient | MESVSLLEIIPALWPMIVGFVGLIFWLAKSYADIETLKEKVKVLYDL |
Ga0206128_10264754 | 3300020166 | Seawater | MPWLDIISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNDKDNS |
Ga0206129_100294677 | 3300020182 | Seawater | MPWLDIISALWPVAVGFAALIFWLAKSYADIEMLKDKVRVLYELHNDKDNN |
Ga0206129_103085331 | 3300020182 | Seawater | MDWLDIISALWPVAVGFAALIFWLAKSYADIEVLKDKVRV |
Ga0206677_100124427 | 3300021085 | Seawater | MAWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSKDNN |
Ga0206682_100157483 | 3300021185 | Seawater | MDWTISIMPWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSKDNN |
Ga0206682_100446061 | 3300021185 | Seawater | MAWLEVISALWPVAVGFAALIFWLAKSYADIEVLKD |
Ga0212030_10021263 | 3300022053 | Aqueous | MGDVSILEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDKK |
Ga0212030_10222682 | 3300022053 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYV |
Ga0212023_10003127 | 3300022061 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10007513 | 3300022061 | Aqueous | MESASLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10008763 | 3300022061 | Aqueous | VSLLEVIPAIWPVAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10014002 | 3300022061 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10085002 | 3300022061 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIDTLKEKVKVLYDLYNSKN |
Ga0212023_10299593 | 3300022061 | Aqueous | MTDYKFIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNRRDN |
Ga0212023_10415813 | 3300022061 | Aqueous | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10429862 | 3300022061 | Aqueous | MNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212023_10462032 | 3300022061 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKV |
Ga0212023_10582381 | 3300022061 | Aqueous | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212029_10075961 | 3300022063 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLVKSYADIETLKEKVKVL |
Ga0196889_10138423 | 3300022072 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKV |
Ga0196889_10158092 | 3300022072 | Aqueous | VESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212022_10082291 | 3300022164 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADID |
Ga0212022_10299362 | 3300022164 | Aqueous | MESVSLLEIIPALWPIIVGFVSLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0212022_10635832 | 3300022164 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVK |
Ga0196903_10289533 | 3300022169 | Aqueous | SMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0196887_10237551 | 3300022178 | Aqueous | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIE |
Ga0196901_10407543 | 3300022200 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLY |
Ga0196901_10482622 | 3300022200 | Aqueous | MTDNFSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKRDN |
Ga0196901_10488073 | 3300022200 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIET |
Ga0208148_10112724 | 3300025508 | Aqueous | MNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNS |
Ga0208148_10582884 | 3300025508 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNS |
Ga0208148_10777573 | 3300025508 | Aqueous | ESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0208303_10488893 | 3300025543 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEK |
Ga0208303_10568292 | 3300025543 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKE |
Ga0208303_10577893 | 3300025543 | Aqueous | SVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0208303_11026502 | 3300025543 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLK |
Ga0209304_10105423 | 3300025577 | Pelagic Marine | MKSVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0209304_10209653 | 3300025577 | Pelagic Marine | MNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0209094_10767012 | 3300025594 | Pelagic Marine | MESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV |
Ga0209194_10371352 | 3300025632 | Pelagic Marine | MEYVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0208643_10200742 | 3300025645 | Aqueous | MEPVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0208643_11544851 | 3300025645 | Aqueous | MNLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0208160_10317794 | 3300025647 | Aqueous | MESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLY |
Ga0208545_10731842 | 3300025806 | Aqueous | MTSASFLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYD |
Ga0209533_11883501 | 3300025874 | Pelagic Marine | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV |
Ga0208544_100328533 | 3300025887 | Aqueous | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVL |
Ga0208544_103261861 | 3300025887 | Aqueous | VESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVK |
Ga0209383_12028552 | 3300027672 | Marine | ESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
(restricted) Ga0233415_100078049 | 3300027861 | Seawater | MPWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSREKD |
Ga0256372_10203411 | 3300028123 | Sea-Ice Brine | MTDNPSLLQIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDQ |
Ga0308023_10749461 | 3300031167 | Marine | MDGYSFIELVSALWPILAGFVGLIFWLAKSYADIETLKEKVRV |
Ga0308007_101882151 | 3300031599 | Marine | LLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN |
Ga0308007_102474561 | 3300031599 | Marine | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLY |
Ga0307984_10849651 | 3300031658 | Marine | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK |
Ga0307984_11598462 | 3300031658 | Marine | MGGVSLLEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNNRDK |
Ga0307986_102074901 | 3300031659 | Marine | MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKE |
⦗Top⦘ |