NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F095155

Metagenome Family F095155

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F095155
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 48 residues
Representative Sequence MESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK
Number of Associated Samples 48
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 53.40 %
% of genes near scaffold ends (potentially truncated) 50.48 %
% of genes from short scaffolds (< 2000 bps) 80.00 %
Associated GOLD sequencing projects 31
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (49.524 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(57.143 % of family members)
Environment Ontology (ENVO) Unclassified
(98.095 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.429 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 90.20%    β-sheet: 0.00%    Coil/Unstructured: 9.80%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13884Peptidase_S74 37.14
PF05106Phage_holin_3_1 3.81
PF11753DUF3310 1.90
PF07460NUMOD3 0.95
PF01555N6_N4_Mtase 0.95
PF13539Peptidase_M15_4 0.95
PF05133Phage_prot_Gp6 0.95
PF05551zf-His_Me_endon 0.95
PF00692dUTPase 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 0.95
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 0.95
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.95
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.95
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.48 %
UnclassifiedrootN/A49.52 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10022669All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium2935Open in IMG/M
3300000115|DelMOSum2011_c10052220Not Available1603Open in IMG/M
3300000115|DelMOSum2011_c10053732All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1568Open in IMG/M
3300000115|DelMOSum2011_c10089348Not Available1043Open in IMG/M
3300000115|DelMOSum2011_c10204969All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes547Open in IMG/M
3300001348|JGI20154J14316_10061175Not Available1484Open in IMG/M
3300006029|Ga0075466_1000045Not Available35610Open in IMG/M
3300006029|Ga0075466_1021858Not Available2063Open in IMG/M
3300006029|Ga0075466_1024308All Organisms → Viruses → Predicted Viral1934Open in IMG/M
3300006029|Ga0075466_1029176All Organisms → cellular organisms → Bacteria → Proteobacteria1733Open in IMG/M
3300006029|Ga0075466_1124101Not Available682Open in IMG/M
3300006029|Ga0075466_1165952Not Available561Open in IMG/M
3300006029|Ga0075466_1173317Not Available545Open in IMG/M
3300006029|Ga0075466_1176206All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium539Open in IMG/M
3300006029|Ga0075466_1186395Not Available519Open in IMG/M
3300006802|Ga0070749_10495034All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300006803|Ga0075467_10004997All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Stenotrophomonas → Stenotrophomonas maltophilia group9645Open in IMG/M
3300006803|Ga0075467_10173807All Organisms → Viruses → Predicted Viral1218Open in IMG/M
3300006803|Ga0075467_10401253Not Available714Open in IMG/M
3300006803|Ga0075467_10430665All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5684Open in IMG/M
3300006803|Ga0075467_10591852Not Available567Open in IMG/M
3300006920|Ga0070748_1363521All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5509Open in IMG/M
3300007231|Ga0075469_10192588Not Available546Open in IMG/M
3300007231|Ga0075469_10203668All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5528Open in IMG/M
3300007276|Ga0070747_1092267Not Available1122Open in IMG/M
3300007276|Ga0070747_1348197All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes506Open in IMG/M
3300007538|Ga0099851_1152970Not Available858Open in IMG/M
3300007540|Ga0099847_1159585All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5668Open in IMG/M
3300007542|Ga0099846_1057237All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1471Open in IMG/M
3300009074|Ga0115549_1033958Not Available1907Open in IMG/M
3300009074|Ga0115549_1132125All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes819Open in IMG/M
3300009074|Ga0115549_1258441Not Available551Open in IMG/M
3300009074|Ga0115549_1263424Not Available545Open in IMG/M
3300009423|Ga0115548_1057528All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300009423|Ga0115548_1177231Not Available665Open in IMG/M
3300009426|Ga0115547_1093381All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes997Open in IMG/M
3300009435|Ga0115546_1066187Not Available1360Open in IMG/M
3300009435|Ga0115546_1084649All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium1167Open in IMG/M
3300009435|Ga0115546_1169968All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage762Open in IMG/M
3300009788|Ga0114923_10512951All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Pseudoalteromonas phage H105/1894Open in IMG/M
3300010316|Ga0136655_1042145All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas1446Open in IMG/M
3300010316|Ga0136655_1210419Not Available579Open in IMG/M
3300010316|Ga0136655_1267086Not Available509Open in IMG/M
3300013010|Ga0129327_10091057All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-51503Open in IMG/M
3300013010|Ga0129327_10509866Not Available653Open in IMG/M
3300013010|Ga0129327_10563984All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5624Open in IMG/M
3300017697|Ga0180120_10076360All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1480Open in IMG/M
3300017697|Ga0180120_10453883Not Available500Open in IMG/M
3300020166|Ga0206128_1026475Not Available3165Open in IMG/M
3300020182|Ga0206129_10029467All Organisms → Viruses → Predicted Viral3941Open in IMG/M
3300020182|Ga0206129_10308533All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage634Open in IMG/M
3300021085|Ga0206677_10012442Not Available5702Open in IMG/M
3300021185|Ga0206682_10015748All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5035Open in IMG/M
3300021185|Ga0206682_10044606All Organisms → Viruses → Predicted Viral2475Open in IMG/M
3300022053|Ga0212030_1002126Not Available1933Open in IMG/M
3300022053|Ga0212030_1022268Not Available858Open in IMG/M
3300022061|Ga0212023_1000312Not Available3871Open in IMG/M
3300022061|Ga0212023_1000751All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-52893Open in IMG/M
3300022061|Ga0212023_1000876All Organisms → Viruses2751Open in IMG/M
3300022061|Ga0212023_1001400Not Available2367Open in IMG/M
3300022061|Ga0212023_1008500All Organisms → Viruses → Predicted Viral1286Open in IMG/M
3300022061|Ga0212023_1029959Not Available752Open in IMG/M
3300022061|Ga0212023_1041581Not Available639Open in IMG/M
3300022061|Ga0212023_1042986Not Available628Open in IMG/M
3300022061|Ga0212023_1046203All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes606Open in IMG/M
3300022061|Ga0212023_1058238Not Available536Open in IMG/M
3300022063|Ga0212029_1007596All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1266Open in IMG/M
3300022072|Ga0196889_1013842All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.1737Open in IMG/M
3300022072|Ga0196889_1015809Not Available1608Open in IMG/M
3300022164|Ga0212022_1008229Not Available1421Open in IMG/M
3300022164|Ga0212022_1029936Not Available833Open in IMG/M
3300022164|Ga0212022_1063583All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5569Open in IMG/M
3300022169|Ga0196903_1028953Not Available657Open in IMG/M
3300022200|Ga0196901_1040754Not Available1770Open in IMG/M
3300022200|Ga0196901_1048262Not Available1598Open in IMG/M
3300022200|Ga0196901_1048807All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1587Open in IMG/M
3300025508|Ga0208148_1011272All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-52723Open in IMG/M
3300025508|Ga0208148_1058288Not Available930Open in IMG/M
3300025508|Ga0208148_1077757Not Available755Open in IMG/M
3300025543|Ga0208303_1048889All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300025543|Ga0208303_1056829Not Available930Open in IMG/M
3300025543|Ga0208303_1057789Not Available919Open in IMG/M
3300025543|Ga0208303_1102650All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5602Open in IMG/M
3300025577|Ga0209304_1010542All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3419Open in IMG/M
3300025577|Ga0209304_1020965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-52081Open in IMG/M
3300025594|Ga0209094_1076701All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes799Open in IMG/M
3300025632|Ga0209194_1037135Not Available1487Open in IMG/M
3300025645|Ga0208643_1020074All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes2352Open in IMG/M
3300025645|Ga0208643_1154485Not Available578Open in IMG/M
3300025647|Ga0208160_1031779All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1595Open in IMG/M
3300025806|Ga0208545_1073184All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes952Open in IMG/M
3300025874|Ga0209533_1188350All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes882Open in IMG/M
3300025887|Ga0208544_10032853Not Available2642Open in IMG/M
3300025887|Ga0208544_10326186Not Available591Open in IMG/M
3300027672|Ga0209383_1202855Not Available576Open in IMG/M
(restricted) 3300027861|Ga0233415_10007804All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4262Open in IMG/M
3300028123|Ga0256372_1020341All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Shewanella phage SppYZU01759Open in IMG/M
3300031167|Ga0308023_1074946Not Available633Open in IMG/M
3300031599|Ga0308007_10188215Not Available722Open in IMG/M
3300031599|Ga0308007_10247456All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes606Open in IMG/M
3300031658|Ga0307984_1084965All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Zobellviridae → Cobavirinae → Veravirus → Roseobacter phage CRP-5936Open in IMG/M
3300031658|Ga0307984_1159846All Organisms → cellular organisms → Bacteria → Proteobacteria627Open in IMG/M
3300031659|Ga0307986_10207490All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes872Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous57.14%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine13.33%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient7.62%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine5.71%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine4.76%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater2.86%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.86%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.90%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.95%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.95%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.95%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.95%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNAEnvironmentalOpen in IMG/M
3300006920Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12EnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007276Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009426Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009788Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaGEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300021085Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 30m 12015EnvironmentalOpen in IMG/M
3300021185Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022164Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025594Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)EnvironmentalOpen in IMG/M
3300025632Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025874Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)EnvironmentalOpen in IMG/M
3300025887Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027672Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028123Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SI3LEnvironmentalOpen in IMG/M
3300031167Marine microbial communities from water near the shore, Antarctic Ocean - #418EnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031659Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1002266943300000115MarineVESVSLLELIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
DelMOSum2011_1005222043300000115MarineVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
DelMOSum2011_1005373223300000115MarineMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
DelMOSum2011_1008934833300000115MarineMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
DelMOSum2011_1020496923300000115MarineMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYN
JGI20154J14316_1006117553300001348Pelagic MarineRALMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_1000045453300006029AqueousMTDYKFIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNRRDN*
Ga0075466_102185823300006029AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_102430833300006029AqueousVSLLEVIPAIWPVAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_102917643300006029AqueousMGDVSILEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDKK*
Ga0075466_112410123300006029AqueousVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_116595213300006029AqueousMNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDL
Ga0075466_117331723300006029AqueousVESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_117620623300006029AqueousMTSASFLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075466_118639523300006029AqueousVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0070749_1049503423300006802AqueousMGDVSILEIIPAIWPIAVGFVDLIFWLAKSYADIETLKEKVKVLYDLYNKDKK*
Ga0075467_10004997133300006803AqueousMTDYKFIELIAALWPLIVAFVGLIFWLAKSYADTETLKEKVKVLYDLYNRRDN*
Ga0075467_1017380713300006803AqueousMESVSLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075467_1040125333300006803AqueousMNLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075467_1043066523300006803AqueousMKSVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0075467_1059185213300006803AqueousMNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLY
Ga0070748_136352113300006920AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIET
Ga0075469_1019258833300007231AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKV
Ga0075469_1020366823300007231AqueousMESASLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV
Ga0070747_109226713300007276AqueousMNILEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK
Ga0070747_134819723300007276AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK
Ga0099851_115297023300007538AqueousMTDNFSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKRDN*
Ga0099847_114715413300007540AqueousMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEK
Ga0099847_115958533300007540AqueousMNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLY
Ga0099846_105723713300007542AqueousVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLY
Ga0115549_103395823300009074Pelagic MarineMNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0115549_113212513300009074Pelagic MarineMESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETL
Ga0115549_125844113300009074Pelagic MarineMPWLDIISALWPVAVGFATLIFWLDKSYADSEVLKDKVRVLYELHNNKDNS*
Ga0115549_126342433300009074Pelagic MarineLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0115548_105752813300009423Pelagic MarineMNDYNVIELIAGLLPLIVAFVGLIFWLAKSYADIETLKEKVKVLY
Ga0115548_117723133300009423Pelagic MarineMKSVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0115547_109338123300009426Pelagic MarineMESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0115546_106618723300009435Pelagic MarineMEYVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0115546_108464943300009435Pelagic MarineMPWLDIISALWPLAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNNKDNS*
Ga0115546_116996833300009435Pelagic MarineMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYN
Ga0114923_1051295133300009788Deep SubsurfaceMEILEVISALWPILIGIIGLIFWLAKSYADIETLKDKVKTLY
Ga0136655_104214513300010316Freshwater To Marine Saline GradientVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYD
Ga0136655_121041913300010316Freshwater To Marine Saline GradientIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN*
Ga0136655_126708613300010316Freshwater To Marine Saline GradientMKSVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDL
Ga0129327_1009105713300013010Freshwater To Marine Saline GradientMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDL
Ga0129327_1050986623300013010Freshwater To Marine Saline GradientMQTLLDLWPIIVAVIGLVFWLSKSHADIETLKEKVKVLFEMANRK*
Ga0129327_1056398413300013010Freshwater To Marine Saline GradientMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDL
Ga0180120_1007636033300017697Freshwater To Marine Saline GradientVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKV
Ga0180120_1045388313300017697Freshwater To Marine Saline GradientMESVSLLEIIPALWPMIVGFVGLIFWLAKSYADIETLKEKVKVLYDL
Ga0206128_102647543300020166SeawaterMPWLDIISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNDKDNS
Ga0206129_1002946773300020182SeawaterMPWLDIISALWPVAVGFAALIFWLAKSYADIEMLKDKVRVLYELHNDKDNN
Ga0206129_1030853313300020182SeawaterMDWLDIISALWPVAVGFAALIFWLAKSYADIEVLKDKVRV
Ga0206677_1001244273300021085SeawaterMAWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSKDNN
Ga0206682_1001574833300021185SeawaterMDWTISIMPWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSKDNN
Ga0206682_1004460613300021185SeawaterMAWLEVISALWPVAVGFAALIFWLAKSYADIEVLKD
Ga0212030_100212633300022053AqueousMGDVSILEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDKK
Ga0212030_102226823300022053AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYV
Ga0212023_100031273300022061AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_100075133300022061AqueousMESASLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_100087633300022061AqueousVSLLEVIPAIWPVAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_100140023300022061AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_100850023300022061AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIDTLKEKVKVLYDLYNSKN
Ga0212023_102995933300022061AqueousMTDYKFIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNRRDN
Ga0212023_104158133300022061AqueousMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_104298623300022061AqueousMNLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212023_104620323300022061AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKV
Ga0212023_105823813300022061AqueousVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212029_100759613300022063AqueousMESVSLLEIIPALWPIVVGFVGLIFWLVKSYADIETLKEKVKVL
Ga0196889_101384233300022072AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKV
Ga0196889_101580923300022072AqueousVESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212022_100822913300022164AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADID
Ga0212022_102993623300022164AqueousMESVSLLEIIPALWPIIVGFVSLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0212022_106358323300022164AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVK
Ga0196903_102895333300022169AqueousSMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0196887_102375513300022178AqueousMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIE
Ga0196901_104075433300022200AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLY
Ga0196901_104826223300022200AqueousMTDNFSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKRDN
Ga0196901_104880733300022200AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIET
Ga0208148_101127243300025508AqueousMNDYNVIELIAALWPLIVAFVGLIFWLAKSYADIETLKEKVKVLYDLYNS
Ga0208148_105828843300025508AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNS
Ga0208148_107775733300025508AqueousESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0208303_104888933300025543AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEK
Ga0208303_105682923300025543AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKE
Ga0208303_105778933300025543AqueousSVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0208303_110265023300025543AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLK
Ga0209304_101054233300025577Pelagic MarineMKSVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0209304_102096533300025577Pelagic MarineMNLLELIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0209094_107670123300025594Pelagic MarineMESVSLIEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV
Ga0209194_103713523300025632Pelagic MarineMEYVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0208643_102007423300025645AqueousMEPVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0208643_115448513300025645AqueousMNLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0208160_103177943300025647AqueousMESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLY
Ga0208545_107318423300025806AqueousMTSASFLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYD
Ga0209533_118835013300025874Pelagic MarineMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKV
Ga0208544_1003285333300025887AqueousMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVL
Ga0208544_1032618613300025887AqueousVESVSLLEIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVK
Ga0209383_120285523300027672MarineESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
(restricted) Ga0233415_1000780493300027861SeawaterMPWLEVISALWPVAVGFAALIFWLAKSYADIEVLKDKVRVLYELHNSREKD
Ga0256372_102034113300028123Sea-Ice BrineMTDNPSLLQIIPALWPIVVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNKDQ
Ga0308023_107494613300031167MarineMDGYSFIELVSALWPILAGFVGLIFWLAKSYADIETLKEKVRV
Ga0308007_1018821513300031599MarineLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSKN
Ga0308007_1024745613300031599MarineMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLY
Ga0307984_108496513300031658MarineMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNSK
Ga0307984_115984623300031658MarineMGGVSLLEIIPAIWPIAVGFVGLIFWLAKSYADIETLKEKVKVLYDLYNNRDK
Ga0307986_1020749013300031659MarineMESVSLLEIIPALWPIIVGFVGLIFWLAKSYADIETLKE


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