NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F095145

Metagenome Family F095145

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F095145
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 93 residues
Representative Sequence MAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLTADEQYIVFSCNRSDFFHIPEDVTLPWSEGVCRFVVEGGP
Number of Associated Samples 90
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 44.76 %
% of genes near scaffold ends (potentially truncated) 97.14 %
% of genes from short scaffolds (< 2000 bps) 86.67 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.048 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(32.381 % of family members)
Environment Ontology (ENVO) Unclassified
(53.333 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.810 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.
1JGI25385J37094_100024271
2JGI25390J43892_100524141
3JGI25386J43895_100515141
4JGI25389J43894_10734132
5Ga0066674_104290062
6Ga0066672_106252692
7Ga0066677_106701352
8Ga0066683_105097231
9Ga0066680_100612464
10Ga0066679_103852381
11Ga0066675_105561663
12Ga0070709_109722482
13Ga0070694_1010518632
14Ga0070708_1010182542
15Ga0066689_101311601
16Ga0066687_100374501
17Ga0070699_1004198571
18Ga0070699_1007158212
19Ga0066697_100070531
20Ga0066695_100867141
21Ga0066692_101291671
22Ga0066704_104545462
23Ga0066704_107757721
24Ga0066698_109105531
25Ga0066706_101331124
26Ga0066903_1020971414
27Ga0066903_1027361992
28Ga0070717_118704741
29Ga0066651_103768012
30Ga0066696_100045427
31Ga0066656_108533071
32Ga0066656_108774812
33Ga0066656_108774822
34Ga0066652_1001360973
35Ga0079221_104554783
36Ga0079221_115783051
37Ga0079220_112040113
38Ga0075425_1025261252
39Ga0075425_1031519432
40Ga0075426_112366521
41Ga0075436_1002377812
42Ga0075435_1002371921
43Ga0075435_1019947691
44Ga0075435_1019947701
45Ga0099793_103797201
46Ga0099794_102717632
47Ga0099830_102778453
48Ga0099828_106406661
49Ga0075423_102013824
50Ga0134082_100784851
51Ga0134088_100372371
52Ga0134086_105010122
53Ga0134064_100817071
54Ga0134080_100856622
55Ga0134071_101060071
56Ga0134071_105067721
57Ga0126378_101590855
58Ga0126378_132014082
59Ga0126381_1039465332
60Ga0137392_108401781
61Ga0137391_104584031
62Ga0137393_108196531
63Ga0137389_100346651
64Ga0137364_104046612
65Ga0137382_102255712
66Ga0137365_113574271
67Ga0137399_106019982
68Ga0137380_111572952
69Ga0137377_100543241
70Ga0137387_112506612
71Ga0137386_104391851
72Ga0137390_115504651
73Ga0137390_117189821
74Ga0137410_114998852
75Ga0134077_103069202
76Ga0134087_100605612
77Ga0134081_100618001
78Ga0134078_100706423
79Ga0134079_106467642
80Ga0120170_10823131
81Ga0134072_103905492
82Ga0066655_101966191
83Ga0066667_100591224
84Ga0066662_108597882
85Ga0066662_112404161
86Ga0193747_10731061
87Ga0210404_100923994
88Ga0209469_11304322
89Ga0209055_12194702
90Ga0209055_12332402
91Ga0209647_12968181
92Ga0209266_11447832
93Ga0209802_10646401
94Ga0209158_11025691
95Ga0209808_10931581
96Ga0209690_13006801
97Ga0209160_11817082
98Ga0209805_11700421
99Ga0209156_100521534
100Ga0209161_100763495
101Ga0209474_107175762
102Ga0209283_104285612
103Ga0209283_108211011
104Ga0209590_104786351
105Ga0307469_114451881
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.19%    β-sheet: 0.00%    Coil/Unstructured: 72.81%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

1020304050607080MAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLTADEQYIVFSCNRSDFFHIPEDVTLPWSEGVCRFVVEGGPSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
99.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Vadose Zone Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Permafrost
Soil
Grasslands Soil
Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Rhizosphere
21.0%2.9%12.4%2.9%32.4%8.6%5.7%7.6%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1000242713300002558Grasslands SoilMTSDARRQSARDLLEDXARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKQFPSSS
JGI25390J43892_1005241413300002911Grasslands SoilMSWDVKSPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPNYTSE
JGI25386J43895_1005151413300002912Grasslands SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTT
JGI25389J43894_107341323300002916Grasslands SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLSSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDVTLP
Ga0066674_1042900623300005166SoilMTSDARRQSARDLLEDAARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSNVFHIPEDVTLPWSEGVCRFVV
Ga0066672_1062526923300005167SoilLRYTVLGMAPTARELIEQAAAQGSDLETVTRGVLERLADLTGLSSTYLAETRLTVDEQYIVFSCNRSEFFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKQFPSSAVARLLEIRTFISYPVFT
Ga0066677_1067013523300005171SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLSSTYLAETRLTADEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPNYTSDAQKQFPKSSVARLLEIRTFISYP
Ga0066683_1050972313300005172SoilMAPTARQLLDEAAARGSDLETVARGVLAMPAELTGLNSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPNYTSDAQKQFPKSSVARLLEIRTFIS
Ga0066680_1006124643300005174SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLSSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPNYTS
Ga0066679_1038523813300005176SoilLRYTVLGMAPTARELIEQAAAQGSDLETVTRGVLERLADLTGLSSTYLAETRLTVDEQYIVFSCNRSELFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKRFPSSAVARLLEI
Ga0066675_1055616633300005187SoilMAPTARELLEEAARHGSDLESVARGVLERLSELTGLSSTYLAETRLTADEQYIVFACNRSDVFHIPEDVTL
Ga0070709_1097224823300005434Corn, Switchgrass And Miscanthus RhizosphereMAPTARELLAEAAASGEDLESVARGLLARLAELTGLSSTYLAETRLNADEQFILIAHNTSDVFHIPEDISLP*
Ga0070694_10105186323300005444Corn, Switchgrass And Miscanthus RhizosphereMPMTEIRRPSARQLLEEAAQQGGDLESVARGVLARLAELTGLSSTYLAETRLMLDEQYIVFSCNRSTVFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQK
Ga0070708_10101825423300005445Corn, Switchgrass And Miscanthus RhizosphereMAPTARELLEEAARAGSDLESVARGVLERLSELTGLSSTYLAETRLTSDEQYIVFAVNRSDVFHIPEDVTLPWSEGVCRF
Ga0066689_1013116013300005447SoilLGVARHSEPTRLRINVDTVLRMAPSARELLEQAVVSGTDLETVARGVLARLADLTGLSSTYLAETRLIADEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSSVARLLEI
Ga0066687_1003745013300005454SoilMGSEIRRTSARQLLEEAASQGSDLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSELFHIPEDVTL
Ga0070699_10041985713300005518Corn, Switchgrass And Miscanthus RhizosphereVRYTVLGMAPSARQLLEQAAAQGGDLETVARGVLERLADLTGLSSTYLAETRLISDEQYIVFSCNRSELFHIPEDVTLPWSEGVCRFVVE
Ga0070699_10071582123300005518Corn, Switchgrass And Miscanthus RhizosphereMAPTARELLEEAAREGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVT
Ga0066697_1000705313300005540SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVV
Ga0066695_1008671413300005553SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYT
Ga0066692_1012916713300005555SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVF
Ga0066704_1045454623300005557SoilMGSDFRRTSARQLLEEAAAQGSDLETVARGVLARLAELTGLSSTYLAETRLTSDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTSNAQKQFPKSSV
Ga0066704_1077577213300005557SoilMAPDLRRPSATELLAEAAAQGADLETVARGVLARLSELTGLSSTYLAETRLTADEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSSVARLLEIRTFISYPVFT
Ga0066698_1091055313300005558SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVC
Ga0066706_1013311243300005598SoilLGVARHSEPTRLRINVDTVLRMAPSARELLEQAAAPGSDLETVARGVLSRLADLTGLSSTYLAETRLTVDEQYIVFSVNRSDQFHIPEDVTLPWSEGVCRFVVEGGPNFTTEAQKQFPSSSVARLLEIRTF
Ga0066903_10209714143300005764Tropical Forest SoilMLPNNLGPRYTVLKMAAPTARELLALAADTSTDLETVARAVLARLADLTGLSSTYLAETRLSADEQYIVYSENRSELFHIPEDV
Ga0066903_10273619923300005764Tropical Forest SoilVEPTARELLEEAAGKGGDLESVARGVLEKLSELTGLSSTYLAETRLVADEQYIVFACNRSELFHIPEDVTLPWSEGVCRFVVEGGSHYTSDTQKQFPSSSVA
Ga0070717_1187047413300006028Corn, Switchgrass And Miscanthus RhizosphereMAPSARQLLEQAAAQGSDLETVARGVLERLADLTGLSSTYLAETRLISDEQYIVFSCNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQ
Ga0066651_1037680123300006031SoilMAPTARELLEEAARNGSDLESLARGLPARLSDLTGLSSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGP
Ga0066696_1000454273300006032SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPN
Ga0066656_1085330713300006034SoilMTSEAGRQSARDLLEDAARQGSDLETVARGVLARLAELTGLSSTYLAETRLMADEQYIVFSFNRSDVFHIPEDVTLPWSEGVCR
Ga0066656_1087748123300006034SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVV
Ga0066656_1087748223300006034SoilMAPTARELLEEAARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVV
Ga0066652_10013609733300006046SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPW
Ga0079221_1045547833300006804Agricultural SoilVRYTVLGMAPSARQLLEQAAAQGSDLETVARGVLERLADLTGLSSTYLAETRLVSDEQYIVFSCNRSNLFHIPEDVTLPWSEGVCRFVVEG
Ga0079221_1157830513300006804Agricultural SoilMAPTARELLEAAAAQGGDLETVARGVLERLADLTGLSSTYLAETRLMSDEQYIVFAVNHSDQFHIPEDVTLPWSEGVCRFVVE
Ga0079220_1120401133300006806Agricultural SoilMAPSARQLLEQAAAQGSDLETVARGVLERLADLTGLSSTYLAETRLVSDEQYIVFSCNRSDLFHIPEDVTLPWSEGV
Ga0075425_10252612523300006854Populus RhizosphereMAPTARELLEEAAREGSDLETVARRMLERLSDLTGLSSTYLAETRLIEDEQYIVFAVNRSELFHIPEDVTLPWSEGVC
Ga0075425_10315194323300006854Populus RhizosphereMAPSARDLLAAAAAQGGDLETVARSVLERLAELTGLSSTYLAETRLIADEQYIVFSVNHSDLFHIPEDVTLPWSEGVCRFVVEGGPHYTKDAQKQFP
Ga0075426_1123665213300006903Populus RhizosphereMAPSARQLLEQAAAQGSDLETVARGVLERLADLTGLSSTYLAETRLISDEQYIVFSCNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSAVARLLEIRTFI
Ga0075436_10023778123300006914Populus RhizosphereMAPTARELLEDAARGGSDLETVARGVLGRLSELTGLSSTYLAETRLISDEQYIVFAVNRSEVFHIPEDVTLPWSEGVCRFVVEGGPHYTADAQKQFPS
Ga0075435_10023719213300007076Populus RhizosphereMAPTARELIEQAAAQGSDLETVARGVLERLAELTGLSSTYLAETRLITDEQYIVFACNRSTLFHIPEDVTLPWSEGVCRFVVEGGPNY
Ga0075435_10199476913300007076Populus RhizosphereMAPTARELLEEAAREGSDLETVARRVLERLSDLTGLSSTYLAETRLIEDEQYIVFAVNRSELFHIPEDVT
Ga0075435_10199477013300007076Populus RhizosphereMAPTARELLEEAAREGSDLETVARRMLERLSDLTGLSSTYLAETRLIEDEQYIVFAVNRSELFHIPEDVT
Ga0099793_1037972013300007258Vadose Zone SoilMGSDFRRTSARQLLEEAAAQGSDLETVARGVLARLAELTGLSSTYLAETRLTSDEQYIVFSCNRSDVFHIPEDVT
Ga0099794_1027176323300007265Vadose Zone SoilMAPSARELLEQAAGQGSDLETVARGVLERLADLTGLSSTYLAETRLTVDEQYIVFACNRSDVFHIPEDITLPWSEGVCRFVVEGGPSYTTDAQRQFPSSSVARLLEIRTFISYPVFTREGRFLARFAVRAKSRWRSRRRSWSSCANARD*
Ga0099830_1027784533300009088Vadose Zone SoilMAPTARELLAEAAAAGGEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQMILFSYNSSQIFHIPEGVTLPWSEAVCRFVVEGAPNYSKNVPKAFPRSSVARLLEIRT
Ga0099828_1064066613300009089Vadose Zone SoilMAPTARELLAEAAAGGEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQLILFAYNSSLIFHIPEGVTLPWSEAVCRFVVEGAPNYSKNVPKAFPKSSVARLLEIRTF
Ga0075423_1020138243300009162Populus RhizosphereMAPTARELLEEAAREGSDLETVARRVLERLSDLTGLSSTYLAETRLIEDEQYIVFAVNRSELFHIPEDVTLPWSEGVC
Ga0134082_1007848513300010303Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRF
Ga0134088_1003723713300010304Grasslands SoilMAPTARELLEEAARDGSDLETVARHMLERLSDLTGLSSTYLAETRLIRDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTAEAQKQFP
Ga0134086_1050101223300010323Grasslands SoilMTSDARRQSARDLLEDAARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSNVFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKQFPSSSVARLLEIRTFIS
Ga0134064_1008170713300010325Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGG
Ga0134080_1008566223300010333Grasslands SoilMAPTARELLEEAARDGSDLETVARRMLERLSDLTGLSSTYLAENRLTVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRIVVEGG
Ga0134071_1010600713300010336Grasslands SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTAEAQKQFPSSSVARLLEI
Ga0134071_1050677213300010336Grasslands SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKQFPSSSVARLLEIRTFISYPVFTAE
Ga0126378_1015908553300010361Tropical Forest SoilMHPPTARELLELAADPGRDLETVARAVLAGLADLTGLSSTYLAETRLSADEQYIVYSENRSELFHIPEDVTLPWSEGVFSFVVAGGPHYTDDAQKQFP
Ga0126378_1320140823300010361Tropical Forest SoilVEPTARELLEEAAGKGGDLESVARGVLEKLSELTGLSSTYLAETRLVADEQYIVFACNRSELFHIPEDVTLPWSEGVCRFVVEGGSHY
Ga0126381_10394653323300010376Tropical Forest SoilVEPTARELLEEAAGKGGDLESVARGVLEKLSELTGLSSTYLAETRLVADEQYIVFACNRSELFHIPEDVTLPWSEGVCRFVVEGGSHYTSDAQKQFPSSSVARL
Ga0137392_1084017813300011269Vadose Zone SoilMAPSARELFEQAAAQGSDLETVARRVLERLADLTGLSSTYLAETRLTVDEQYIVFSCNRSNLFHIPEDITLPWSEGV
Ga0137391_1045840313300011270Vadose Zone SoilMPPTARELLAEAAAAGEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQMILFSYNSSQIFHIPEGVTLPWSEAVCRF
Ga0137393_1081965313300011271Vadose Zone SoilMAPSARELFEQAAAQGSDLETVARRVLERLADLTGLSSTYLAETRLTVDEQYIVFSCNRSNLFHIPEDITLPWSEGVCRFVVEGGPNYTTDAQRQFPSSSVARLLEIRTFISYPVFTREGRFFGTLC
Ga0137389_1003466513300012096Vadose Zone SoilMAPTARELLEEAARAGSDLESVARGVLERLSELTGLSSTYLAETRLTSDEQYIVFAVNRSDIFHIPEDVTLPW
Ga0137364_1040466123300012198Vadose Zone SoilMTFEARRPTARDLLEQAARQGSDLETVARGVLARLAELTGLSSTYLAETRLMLDEQYIVFSCNRSELFHIPEDVTLPWSEG
Ga0137382_1022557123300012200Vadose Zone SoilMVSSARELLEAAAAPGGGDLETVARGVLERLAELTGLSSTYLAETRLIADEQYIVFSVNRSDQFHIPEDVTLPWSEGVCRFVI*
Ga0137365_1135742713300012201Vadose Zone SoilMAPSARELLEAAAAQGGDLESVARGVLERLAELTGLSSTYLAETRLIADEQYIVFSVNRSDLFHIPEDVTLPWSEGVCRFVVE
Ga0137399_1060199823300012203Vadose Zone SoilMGSDFRRTSARQLLEEAAAQGSDLETVARGVLARLAELTGLSSTYLAETRLTSDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNCTS
Ga0137380_1115729523300012206Vadose Zone SoilMGSEVGRTSARQLLEEAAAQGSDLETVARGVLARLAELTGLSSTYLAETRLTVDEQYIVFSCNRSDLFHIP
Ga0137377_1005432413300012211Vadose Zone SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTTDAQKQFPSSSVAR
Ga0137387_1125066123300012349Vadose Zone SoilMAPTARELLEDAARAGSDLESVARGMLERLSELTGLSSTYLAETRLISDEQYIVFAVNRSEVFHIPEDVTLPWSEGVCRFVVEGGPHYSDDAQKQF
Ga0137386_1043918513300012351Vadose Zone SoilMAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLIADEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSS
Ga0137390_1155046513300012363Vadose Zone SoilMAPTAKELLAEAAAAGEDLETVARGLLERLAQLTGLSSTYLAETRLRADEQYIVFSYNSSQIFHIPEGVTLPWSEAVCRFVVEGAPNYSK
Ga0137390_1171898213300012363Vadose Zone SoilMAPSARELLEQAAAQGSDLETVARGVLERLADLTGLSSTYLAETRLTLDEQYIVFSCNRSDLFHIPEDITLPWSEGVCRFVV
Ga0137410_1149988523300012944Vadose Zone SoilMAPTARQLLEEAAAQGSDLETVARGVLARLAELTGLSSTYLAETRLFVDEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPNYTSDAQKQFPKSSVARLLEI
Ga0134077_1030692023300012972Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPNYTSEAQKQFPKSSVARLLQ
Ga0134087_1006056123300012977Grasslands SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTAE
Ga0134081_1006180013300014150Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVT
Ga0134078_1007064233300014157Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPNYTSEA
Ga0134079_1064676423300014166Grasslands SoilMAPSARELLEAAAAQGGGDLETVARGVLERLAELTGLSSTYLAETRLIADEQYIVFAVNHSDLFHIPEDVTLPWSEGVCRFVVEGGPHYTNDAQKRFPSSSV
Ga0120170_108231313300014823PermafrostMAPTARELLAEAAAPSEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQMILFSYNSSQIFHIPEGVTLPIVETRQIRAAPAGES
Ga0134072_1039054923300015357Grasslands SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLSSTYLAETRLTADEQYIVFSCNRSDPFHIPEDVTLPWSEGVCRFVVEGGPNYTSDAQKQFPKSSVARLLEIRTFISYPVFTAE
Ga0066655_1019661913300018431Grasslands SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLNSTYLAETRLTADEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRF
Ga0066667_1005912243300018433Grasslands SoilMSWDVKRPSARELLAEAAADGADLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPNYTSEAQKQFPKSSV
Ga0066662_1085978823300018468Grasslands SoilMAPTARELIEQAAAQGSDLETVARGVLQRLAELTGLSSTYLAETRLITDEQYIVFSCNRSNLFHIPEDVTLPWSEGVC
Ga0066662_1124041613300018468Grasslands SoilMAPTAREMLADAAKKGSDLETVAREVLARLAELTGLSSTYLAETRLIQDEQYIVFACNRSDLFHIPEDVTLPWSEGVCRFVVEGGPHYSDDAQKQFPSSS
Ga0193747_107310613300019885SoilMSFDLRRTSARDLLAEAASQGADLETVTRGVLARLAELTGLSSTYLAETRLTADEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPN
Ga0210404_1009239943300021088SoilLARSARELLEQAATQGGDLETVARFVLETLADLTGLSSTYLAETRLVSDEQYIVFSCNRSDLFHIPEDVTLPWSEGVC
Ga0209469_113043223300026307SoilMTSEARRQSARALLEDAARQGSDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSEGVCRFVVEGGPNYTT
Ga0209055_121947023300026309SoilMAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLTADEQYIVFSCNRSDFFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSSVARLLEIRTFISYPVFTPGGRFFGTLC
Ga0209055_123324023300026309SoilMTSDARRQSARDLLEDVARQGNDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPW
Ga0209647_129681813300026319Grasslands SoilLVPDAAELLEQAAAEGNDLETVTRHLLVRLAELTGLSSTYLAETRLIDDVQYIVYAYNSSPEFHIPEDITLPWSEGVCRFV
Ga0209266_114478323300026327SoilMTSEARRQSARALLEDAARQGSDLETVARGVLARLAELTGLSSTYLAETRLMVDEQYIVFSCNRSDVFHIPEDVTLPWSE
Ga0209802_106464013300026328SoilVVSGTDLETVARGMLARLADLTGLSSTYLAETRLIADEQYIVFSCNRSDVFHIQEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSS
Ga0209158_110256913300026333SoilMAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLTADEQYIVFSCNRSDFFHIPEDVTLPWSEGVCRFVVEGGP
Ga0209808_109315813300026523SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLNSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDV
Ga0209690_130068013300026524SoilMTSEAGRQSARDLLEDAARQGSDLETVARGVLARLAELTGLSSTYLAETRLMADEQYIVFSFNRSDVFHI
Ga0209160_118170823300026532SoilMAPSARELLEQAAASGSDLETVARGVLARLADLTGLSSTYLAETRLTADEQYIVFSCNRSDFFHIPEDVTLPWSEGVCRFVVEGGPHYTTDAQKQFPSSSVARLLE
Ga0209805_117004213300026542SoilMSWDVKRPSARELLAEAAADGDLETVARGVLARLAELTGLSSTYLAETRLTMDEQYIVFSCNRSNFFHIPEDVTLPWSEGVCRFVVEGGPNYTSEAQKQFPKSSVARL
Ga0209156_1005215343300026547SoilMAPTARQLLEEAAARGSDLETVARGVLAMLAELTGLNSTYLAETRLTVDEQYIVFSCNRSDLFHIPEDVTLPWSEGVCRFVVEGGPNYTSDAQKQFPKSSVARLLEIRTFISYPVFT
Ga0209161_1007634953300026548SoilLGVARHSEPTRLRINVDTVLRMAPSARELLEQAAAPGSDLETVARGVLSRLADLTGLSSTYLAETRLTVDEQYIVFSVNRSDQFHIPEDVTLPWSEGVCRFVVEGGPNFTTEAQKQFPS
Ga0209474_1071757623300026550SoilMAPTARELLEEVARDGSDLETVARRMLERLSDLTGLSSTYLAETRLIQDEQYIVFAVNRSELFHIPEDVTLPWSEGVCRFVVEGGPHYTAEAQKLFPSSSVARVL
Ga0209283_1042856123300027875Vadose Zone SoilMPPTARELLAEAAAAGEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQMILFSYNSSQIFHIPEGVTLPWSEAVCRFVVEG
Ga0209283_1082110113300027875Vadose Zone SoilMAPTARELLAEAAAGGEDLETVARAVLERLAQLTGLSSTYLAETRLKEDEQLILFAYNSSLIFHIPEGVTLPWSEAVCRFVVEGAPNYSKNVPKAFPKSSVARLLEIRT
Ga0209590_1047863513300027882Vadose Zone SoilMAPTARELLAEVAAAGEDLETVARALLERLAQLTGLSSTYLAETRLKEDEQLIVFSYNASQIFHIPEGVTLPWSEAVCRFVVEGAPNYSKNVPKAFPKSSV
Ga0307469_1144518813300031720Hardwood Forest SoilMAPSARDLLAAAAAQGGDLETVARGVLERLSELTGLSSTYLAETRLTADEQYIVFAVNHSDLFHIPEDVTLPWSEGVCRF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.