Metagenome / Metatranscriptome Family F095135

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095135
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	50 residues
Representative Sequence	MAQMKKPVVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.27 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (42.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (68.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (73.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.48% β-sheet: 0.00% Coil/Unstructured: 80.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13506	Glyco_transf_21	1.90
PF00145	DNA_methylase	1.90
PF13578	Methyltransf_24	0.95
PF04545	Sigma70_r4	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.14 %
Unclassified	root	N/A	22.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	42.86 %
Viruses	superkingdom	All Organisms → Viruses	34.29 %
Unclassified	root	N/A	22.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.86 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	29.52 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	41.90 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	29.52 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.90 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	29.52 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	41.90 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	29.52 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	40.95 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	24.76 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.81 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.95 %

Name	Rank	Taxonomy	Distribution
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	40.95 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	24.76 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.95 %

Name	Rank	Taxonomy	Distribution
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	40.95 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	24.76 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.81 %
Herbidospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora	0.95 %

Name	Rank	Taxonomy	Distribution
actinobacterium acIB-AMD-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	40.95 %
Caudoviricetes sp.	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	24.76 %
Unclassified	root	N/A	22.86 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.76 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3.81 %
Herbidospora cretacea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora cretacea	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002835\|B570J40625_101347935	Not Available	591	Open in IMG/M
3300003277\|JGI25908J49247_10088784	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	754	Open in IMG/M
3300003490\|JGI25926J51410_1021760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1242	Open in IMG/M
3300003860\|Ga0031658_1029492	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005527\|Ga0068876_10196296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1172	Open in IMG/M
3300005581\|Ga0049081_10149468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	855	Open in IMG/M
3300005581\|Ga0049081_10169211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	793	Open in IMG/M
3300005582\|Ga0049080_10032604	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1817	Open in IMG/M
3300005582\|Ga0049080_10213418	Not Available	636	Open in IMG/M
3300005805\|Ga0079957_1341718	Not Available	660	Open in IMG/M
3300006805\|Ga0075464_10279473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1002	Open in IMG/M
3300006805\|Ga0075464_10600843	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	677	Open in IMG/M
3300006805\|Ga0075464_11073916	Not Available	507	Open in IMG/M
3300006875\|Ga0075473_10066353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1408	Open in IMG/M
3300007622\|Ga0102863_1065649	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1063	Open in IMG/M
3300007974\|Ga0105747_1315958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	531	Open in IMG/M
3300008113\|Ga0114346_1134539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1080	Open in IMG/M
3300008113\|Ga0114346_1234428	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	699	Open in IMG/M
3300008448\|Ga0114876_1206040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	658	Open in IMG/M
3300008962\|Ga0104242_1005904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2227	Open in IMG/M
3300009068\|Ga0114973_10092892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1721	Open in IMG/M
3300009155\|Ga0114968_10211480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1119	Open in IMG/M
3300009160\|Ga0114981_10613304	Not Available	578	Open in IMG/M
3300009181\|Ga0114969_10553190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	637	Open in IMG/M
3300009183\|Ga0114974_10163421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1384	Open in IMG/M
3300009183\|Ga0114974_10685520	Not Available	558	Open in IMG/M
3300010160\|Ga0114967_10363976	Not Available	728	Open in IMG/M
3300010965\|Ga0138308_156383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1546	Open in IMG/M
3300011114\|Ga0151515_10205	Not Available	27109	Open in IMG/M
3300011334\|Ga0153697_1392	Not Available	13876	Open in IMG/M
3300012000\|Ga0119951_1052082	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1163	Open in IMG/M
3300012665\|Ga0157210_1001679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	6539	Open in IMG/M
3300013014\|Ga0164295_10665332	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	803	Open in IMG/M
3300013014\|Ga0164295_11423150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	538	Open in IMG/M
3300013295\|Ga0170791_15675874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	782	Open in IMG/M
3300014050\|Ga0119952_1042878	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1279	Open in IMG/M
3300017716\|Ga0181350_1108786	Not Available	675	Open in IMG/M
3300017722\|Ga0181347_1116338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	751	Open in IMG/M
3300017722\|Ga0181347_1164693	Not Available	599	Open in IMG/M
3300017761\|Ga0181356_1172061	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	658	Open in IMG/M
3300017761\|Ga0181356_1191308	Not Available	611	Open in IMG/M
3300017766\|Ga0181343_1171185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	601	Open in IMG/M
3300017774\|Ga0181358_1147027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	807	Open in IMG/M
3300017774\|Ga0181358_1149662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	798	Open in IMG/M
3300017777\|Ga0181357_1208153	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	695	Open in IMG/M
3300017777\|Ga0181357_1218323	Not Available	674	Open in IMG/M
3300017778\|Ga0181349_1099747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1088	Open in IMG/M
3300017778\|Ga0181349_1163501	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	792	Open in IMG/M
3300017778\|Ga0181349_1165233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	786	Open in IMG/M
3300017778\|Ga0181349_1262107	Not Available	573	Open in IMG/M
3300017784\|Ga0181348_1287863	Not Available	554	Open in IMG/M
3300017785\|Ga0181355_1235915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	706	Open in IMG/M
3300019784\|Ga0181359_1139678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	844	Open in IMG/M
3300019784\|Ga0181359_1161300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	759	Open in IMG/M
3300019784\|Ga0181359_1237752	Not Available	561	Open in IMG/M
3300020160\|Ga0211733_10213765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2124	Open in IMG/M
3300020161\|Ga0211726_10458117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	5140	Open in IMG/M
3300020162\|Ga0211735_10241142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1119	Open in IMG/M
3300020172\|Ga0211729_10571072	Not Available	563	Open in IMG/M
3300020172\|Ga0211729_10589790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	780	Open in IMG/M
3300020205\|Ga0211731_11017161	Not Available	533	Open in IMG/M
3300021961\|Ga0222714_10260997	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	967	Open in IMG/M
3300021963\|Ga0222712_10574929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	655	Open in IMG/M
3300022553\|Ga0212124_10065752	All Organisms → Viruses → Predicted Viral	2097	Open in IMG/M
3300022752\|Ga0214917_10034186	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	3739	Open in IMG/M
3300022752\|Ga0214917_10073424	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	2134	Open in IMG/M
3300022752\|Ga0214917_10091352	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1813	Open in IMG/M
3300022752\|Ga0214917_10217109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	924	Open in IMG/M
3300022752\|Ga0214917_10251140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	824	Open in IMG/M
3300023174\|Ga0214921_10128638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1793	Open in IMG/M
3300023184\|Ga0214919_10003611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	23235	Open in IMG/M
3300023184\|Ga0214919_10008050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	14049	Open in IMG/M
3300025896\|Ga0208916_10330324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	665	Open in IMG/M
3300027140\|Ga0255080_1052806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	628	Open in IMG/M
3300027578\|Ga0255075_1020057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1303	Open in IMG/M
3300027608\|Ga0208974_1058748	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1088	Open in IMG/M
3300027754\|Ga0209596_1008980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	6836	Open in IMG/M
3300027754\|Ga0209596_1144397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1066	Open in IMG/M
3300027759\|Ga0209296_1118296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1237	Open in IMG/M
3300027759\|Ga0209296_1172684	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	950	Open in IMG/M
3300027760\|Ga0209598_10036818	All Organisms → Viruses → Predicted Viral	2641	Open in IMG/M
3300027763\|Ga0209088_10254084	Not Available	728	Open in IMG/M
3300027769\|Ga0209770_10335158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	570	Open in IMG/M
3300027797\|Ga0209107_10528501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	520	Open in IMG/M
3300027797\|Ga0209107_10537872	Not Available	514	Open in IMG/M
3300027816\|Ga0209990_10044050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2308	Open in IMG/M
3300027892\|Ga0209550_10816760	Not Available	521	Open in IMG/M
3300027899\|Ga0209668_10027699	All Organisms → Viruses → Predicted Viral	2871	Open in IMG/M
3300027899\|Ga0209668_10835429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	620	Open in IMG/M
3300028394\|Ga0304730_1299320	Not Available	555	Open in IMG/M
3300031707\|Ga0315291_11170740	Not Available	631	Open in IMG/M
3300031787\|Ga0315900_10262256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1465	Open in IMG/M
3300031787\|Ga0315900_10856846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	617	Open in IMG/M
3300031857\|Ga0315909_10220411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1484	Open in IMG/M
3300031885\|Ga0315285_10416307	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	955	Open in IMG/M
3300031963\|Ga0315901_10165459	All Organisms → Viruses → Predicted Viral	1953	Open in IMG/M
3300032092\|Ga0315905_11029904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Herbidospora → Herbidospora cretacea	689	Open in IMG/M
3300032093\|Ga0315902_10317794	All Organisms → Viruses → Predicted Viral	1461	Open in IMG/M
3300033979\|Ga0334978_0139145	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1215	Open in IMG/M
3300033996\|Ga0334979_0364570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	806	Open in IMG/M
3300034062\|Ga0334995_0483160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	750	Open in IMG/M
3300034093\|Ga0335012_0271337	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	871	Open in IMG/M
3300034106\|Ga0335036_0430174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	840	Open in IMG/M
3300034116\|Ga0335068_0068155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2045	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	91.43%
Marine	Environmental → Aquatic → Marine	8.57%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	46.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic	34.29%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	6.67%
Coastal	Environmental → Aquatic → Marine → Coastal	5.71%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.90%
River	Environmental → Aquatic → Freshwater → River	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.76%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.57%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.86%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.90%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.95%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.95%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	23.81%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	16.19%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	10.48%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	6.67%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	4.76%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.76%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.86%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.90%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.90%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.90%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.95%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.95%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.95%
Lake Chemocline	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Chemocline	0.95%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.95%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003490	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010965	Microbial communities from Lake Cadagno chemocline, Switzerland. Combined Assembly of Gp0156211, Gp0156621	Environmental	Open in IMG/M
3300011114	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016Feb	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300012000	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007A	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027140	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Atlam_RepC_8h	Environmental	Open in IMG/M
3300027578	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033979	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034093	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J40625_1013479351	3300002835	Freshwater	MAGKKPTPKATKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG*
JGI25908J49247_100887842	3300003277	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
JGI25926J51410_10217601	3300003490	Freshwater Lake	IQPKGPAKPKTTVKAPVKKKVTVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0031658_10294922	3300003860	Freshwater Lake Sediment	MAQIKRMVGKSKTTTKAPAKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0068876_101962962	3300005527	Freshwater Lake	MAQMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG*
Ga0049081_101494682	3300005581	Freshwater Lentic	MAQMKKPVVKATVKPKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0049081_101692113	3300005581	Freshwater Lentic	MAQITKPAPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0049080_100326042	3300005582	Freshwater Lentic	MATKKPTPKPTVKAPVKKKVLVMPDKINPSKMTPAQKAKYLKNPERYDK*
Ga0049080_102134182	3300005582	Freshwater Lentic	MATKKPTPKPTVKAPVKKKVLVMPDKISPSKMTPAQKAKYLKNPERYDQ*
Ga0079957_13417182	3300005805	Lake	MAQMKKPVVKVTAKPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0075464_102794732	3300006805	Aqueous	MAVAPKKPTPKATKAPVKKKVLVMPDKISPSKMTPAQKARYLQNPGRYDG*
Ga0075464_106008433	3300006805	Aqueous	MAQIKKPAPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0075464_110739162	3300006805	Aqueous	MAQMKRMVGKSKTTTKAPAKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDY*
Ga0075473_100663532	3300006875	Aqueous	MAQIKKPVAKATTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG*
Ga0102863_10656494	3300007622	Estuarine	MATKKPTPKATTKAPVKKKVVVMPSNINPFKMTPAQKAEYLKNPERYNK*
Ga0105747_13159582	3300007974	Estuary Water	MAQMKKPVVKATTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG*
Ga0114346_11345392	3300008113	Freshwater, Plankton	MPAEKKPAVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0114346_12344282	3300008113	Freshwater, Plankton	MAQMKKPVVKKTVTKAPAKTPVKKKVVQMPSNISPSKMTPAQKAKYLQNPERYDK*
Ga0114876_12060401	3300008448	Freshwater Lake	MAAPKKPTPKPKTPAKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0104242_10059043	3300008962	Freshwater	MAQMKKPVVKVTTKPKAPTKKKVVQMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0114973_100928923	3300009068	Freshwater Lake	MAQMKKPVVKKTVTKAPAKAPVKKKVVQMPSKISPSKMTPAQKAKYLANPERYDG*
Ga0114968_102114802	3300009155	Freshwater Lake	MAQIKKPTPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0114981_106133041	3300009160	Freshwater Lake	MAQIKKPVVKATVKPKTPVKKKVVQMPSKISPSKMTPAQKAKYLQNPERYDG*
Ga0114969_105531901	3300009181	Freshwater Lake	TATKAPAKPTVKAPVKKKVTVMPDKISPSKMTPAQKARYLKNPERYDG*
Ga0114974_101634213	3300009183	Freshwater Lake	MAQMKKPVVKVTVKPKAPVKKKVVQMPSKISPSKMTPAQKAKYLQNPERYDK*
Ga0114974_106855203	3300009183	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVTVMPDKISPSKM
Ga0114967_103639762	3300010160	Freshwater Lake	MAQMKKPAVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0138308_1563832	3300010965	Lake Chemocline	MAQIKKPTPKKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG*
Ga0151515_1020528	3300011114	Freshwater	MAQMKKPTPTPKKTPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0153697_139235	3300011334	Freshwater	MAQMKKPVVKATTKPKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0119951_10520822	3300012000	Freshwater	MAQMKKPVVKKTVTKAPAKAPAKKKVVQMPSKISPSKMTPAQKAKYLANPERYDY*
Ga0157210_10016793	3300012665	Freshwater	MAIKKAAVKKTTTKKKAPAKKVVQMPSKISPFKMTPAQKAEYLKNPDRYNG*
Ga0164295_106653322	3300013014	Freshwater	MAQMKKPVVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG*
Ga0164295_114231501	3300013014	Freshwater	MAQMKRMVGKSKTTTKAPAKKKVVQMPSKISPFKMTPAQKAEYLKNPDRYNG*
Ga0170791_156758743	3300013295	Freshwater	KKTVTKAPSKAPAKKKVVQMPSKISPSKMTPAQKAKYLANPERYDG*
Ga0119952_10428783	3300014050	Freshwater	MAQMKKPVVKKTVTKAPSKAPAKKKVVQMPSKISPSKMTPAQKAKYLANPERYDY*
Ga0181350_11087861	3300017716	Freshwater Lake	MAQMKKPVVKTTKAPVKKKILVMPDKISPSKMTPAQKARFLKNPERYNG
Ga0181347_11163381	3300017722	Freshwater Lake	PKGPANPKTTVKAPFKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0181347_11646931	3300017722	Freshwater Lake	MAQIKKPVIKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPE
Ga0181356_11720613	3300017761	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVLVMPNKISPSKMTPAQKARYL
Ga0181356_11913081	3300017761	Freshwater Lake	MAQIKKPAPKKTPVKKKVLVMPDKISPSKMTPAQKARYL
Ga0181343_11711853	3300017766	Freshwater Lake	MAQMKKSVVKTTKAPVKKKVLVMPSKISPSKMTPAQKAR
Ga0181358_11470273	3300017774	Freshwater Lake	PSEIIKDKPKAKTTKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0181358_11496621	3300017774	Freshwater Lake	MVNERTTRKPVVKKTAKPATKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0181357_12081531	3300017777	Freshwater Lake	MAQIKKPAPKKTPVKKKVLVMPNKISPSKMTPAQKSRYLNNPERYDG
Ga0181357_12183232	3300017777	Freshwater Lake	VKMVNERTTRKPVVKKTAKPATKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0181349_10997473	3300017778	Freshwater Lake	QPKGPAKPKTTVKAPVKKKVQVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0181349_11635011	3300017778	Freshwater Lake	MAQMKKPVVKTTKAPVKKKVLVMPSKIDPLKMTPAQKARYS
Ga0181349_11652331	3300017778	Freshwater Lake	KMVNERTTRKPVVKKTAKPATKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDS
Ga0181349_12621072	3300017778	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKN
Ga0181348_12878632	3300017784	Freshwater Lake	MAAKKPTPKATKAPVKKKVLVMPDKISPSKMTPAQKARYLK
Ga0181355_12359151	3300017785	Freshwater Lake	MAQIKKPVIKTTKAPVKKKVLVMPSKISPSKMTPAQKAR
Ga0181359_11396783	3300019784	Freshwater Lake	MAQMKKPVVKATVKPKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0181359_11613002	3300019784	Freshwater Lake	TRKPVVKKTAKPATKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDS
Ga0181359_12377521	3300019784	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0211733_102137653	3300020160	Freshwater	MAQIKKPTPKKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG
Ga0211726_104581171	3300020161	Freshwater	WRRSSRLSKQVGDTMAQMKKPTPTPKKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG
Ga0211735_102411422	3300020162	Freshwater	WRRSSRLSKQVGDTMAQMKKPTPTPKKTPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0211729_105710722	3300020172	Freshwater	MAQMKKPVVKVTKAPAKKKVLVMPSKISPSKMTPAQKARYLKNPERYDY
Ga0211729_105897902	3300020172	Freshwater	MAQIKKPTPKKTPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0211731_110171613	3300020205	Freshwater	MAQMKKPTPTPKKTPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0222714_102609973	3300021961	Estuarine Water	MATKKPTPKPTVKAPVKKKVVVMPDTINPFKMTPAQKAEYLKNAKRYDK
Ga0222712_105749292	3300021963	Estuarine Water	MAQMKKPVVKTIKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0212124_100657524	3300022553	Freshwater	MATKKPTPKPTVKAPVKKKVLVMPDKINPSKMTPAQKVRYLKDPERYNS
Ga0214917_100341862	3300022752	Freshwater	MAQMKKPVVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0214917_100734242	3300022752	Freshwater	MAQMKKPVVKATTKPKAPVKKKVLIMPDKISPSKMTPAQKARYLKNPERYDG
Ga0214917_100913523	3300022752	Freshwater	MAQMKKPVVKVTTKPKAPTKKKVVQMPSKISPSKMTPAQKARYLKNPERYDG
Ga0214917_102171093	3300022752	Freshwater	MAQMKKPVVKTTKVPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0214917_102511402	3300022752	Freshwater	MAQMKKPVVKKTVTKAPSKAPAKKKVVQMPSKISPSKMTPAQKAQYLKNPERYDG
Ga0214921_101286383	3300023174	Freshwater	MAQIKKPTPAPKKTPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0214919_1000361141	3300023184	Freshwater	MATKKPTPKATVKAPVKKKVQVMPDKISPSKMTPAQKARYLKNPERYDY
Ga0214919_100080504	3300023184	Freshwater	MAQMKKPVVKATTKPKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYNG
Ga0208916_103303242	3300025896	Aqueous	MAQIKKPAPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0255080_10528063	3300027140	Freshwater	MAQMKKPVVKVTAKPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPE
Ga0255075_10200572	3300027578	Freshwater	MAQMKKPVVKATTKPKAPVKKKVTVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0208974_10587482	3300027608	Freshwater Lentic	MATKKPTPKPTVKAPVKKKVLVMPDKINPSKMTPAQKAKYLKNPERYDK
Ga0209596_10089801	3300027754	Freshwater Lake	MAQIKKPTPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0209596_11443974	3300027754	Freshwater Lake	MAQMKKPVVKVTVKATPPAKKKVLVMPDKISPSKMTPAQKARYLKNPERYNG
Ga0209296_11182962	3300027759	Freshwater Lake	MAQMKKPVVKVTVKPKAPVKKKVVQMPSKISPSKMTPAQKAKYLQNPERYDK
Ga0209296_11726842	3300027759	Freshwater Lake	MAQMKKPVVKKTVTKAPSKAPAKKKVVQMPSKISPSKMTPAQKAKYLANPERYDG
Ga0209598_100368182	3300027760	Freshwater Lake	MAQMKKPVVKKTVTKAPAKAPVKKKVVQMPSKISPSKMTPAQKAKYLANPERYDG
Ga0209088_102540842	3300027763	Freshwater Lake	MAQIKKPVVKATVKPKTPVKKKVVQMPSKISPSKMTPAQKAKYLQNPERYDG
Ga0209770_103351582	3300027769	Freshwater Lake	MAQMKKSVVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0209107_105285011	3300027797	Freshwater And Sediment	KQITKPVAKKTAKTPAKKKVVQMPSKISPSKMTPAQKAKYLQNPERYDK
Ga0209107_105378721	3300027797	Freshwater And Sediment	MAQMKRMIGKSKTTTKAPAKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0209990_100440502	3300027816	Freshwater Lake	MKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0209550_108167601	3300027892	Freshwater Lake	MAQMKKPVVKATTKPKAPVKKKVLVMPNKISPSKMTPVQ
Ga0209668_100276992	3300027899	Freshwater Lake Sediment	MVGKSKTTTKAPAKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0209668_108354292	3300027899	Freshwater Lake Sediment	MAPKKPTPKKTPVKKKVLVMPDKISSSKMTPAQKARYLKNPERYDK
Ga0304730_12993202	3300028394	Freshwater Lake	MAQMKKPAVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0315291_111707401	3300031707	Sediment	MAAKKPTPKATKAPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0315899_115946801	3300031784	Freshwater	MNCSQRKTARSSKEITMAQMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0315900_102622562	3300031787	Freshwater	MAQMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0315900_108568462	3300031787	Freshwater	AQMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0315909_102204111	3300031857	Freshwater	MAQMKKPVVKKTVTKAPAKTPVKKKVVQMPSNISPSKMTPAQKAKYLQNPERYDK
Ga0315285_104163072	3300031885	Sediment	MAQMKKPVVKATKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0315901_101654591	3300031963	Freshwater	ARSSKEITMAQMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0315905_110299042	3300032092	Freshwater	MPAEKKPAVKTTKAPVKKKVLVMPSKISPSKMTPAQKARYLKNPERYDG
Ga0315902_103177942	3300032093	Freshwater	QMKKPVVKTTTKPKAPVKKKVLVMPNKISPSKMTPAQKARYLKNPERYDG
Ga0334978_0139145_1069_1215	3300033979	Freshwater	MPQIKKPVVKVTAKPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPE
Ga0334979_0364570_239_385	3300033996	Freshwater	MAGKKPTPKATKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG
Ga0334995_0483160_2_175	3300034062	Freshwater	KGRSKEDEVMAGKKPTPKATKTPVKKKVLVMPGKISPSKMTPAQKARYLKNPERYDG
Ga0335012_0271337_16_177	3300034093	Freshwater	MAQMKKPVVKVTAKPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG
Ga0335036_0430174_412_549	3300034106	Freshwater	MPAMPKTKTVGNRKKVLIMPDKISPSKMTPAQKARYLKNPERYDG
Ga0335068_0068155_1496_1657	3300034116	Freshwater	MPQIKKPVVKVTAKPKKTPVKKKVLVMPDKISPSKMTPAQKARYLKNPERYDG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095135

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences