Metagenome / Metatranscriptome Family F095108

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095108
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	77 residues
Representative Sequence	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Number of Associated Samples	95
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.10 %
% of genes near scaffold ends (potentially truncated)	55.24 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.476 % of family members)
Environment Ontology (ENVO)	Unclassified (39.048 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 41.98% Coil/Unstructured: 58.02%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04828	GFA	21.90
PF03781	FGE-sulfatase	11.43
PF00487	FA_desaturase	2.86
PF00486	Trans_reg_C	2.86
PF01068	DNA_ligase_A_M	2.86
PF01872	RibD_C	2.86
PF13354	Beta-lactamase2	1.90
PF03965	Penicillinase_R	0.95
PF13620	CarboxypepD_reg	0.95
PF02635	DrsE	0.95
PF13432	TPR_16	0.95
PF14559	TPR_19	0.95
PF07719	TPR_2	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	21.90
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	11.43
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.86
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.86
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.86
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.86
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.86
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.48 %
Unclassified	root	N/A	29.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.43 %
Unclassified	root	N/A	29.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	20.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.76 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.81 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.95 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	20.00 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.86 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	1.90 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	20.00 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	1.90 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	20.00 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.90 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.52 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	20.00 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3.81 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.90 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8968891	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
2162886011\|MRS1b_contig_8790093	All Organisms → cellular organisms → Bacteria → Proteobacteria	4033	Open in IMG/M
2162886012\|MBSR1b_contig_10034958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	907	Open in IMG/M
3300000890\|JGI11643J12802_10228332	Not Available	505	Open in IMG/M
3300003267\|soilL1_10012676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	2168	Open in IMG/M
3300004114\|Ga0062593_100118920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1919	Open in IMG/M
3300004114\|Ga0062593_101027470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	848	Open in IMG/M
3300004153\|Ga0063455_100685299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300004156\|Ga0062589_100062255	All Organisms → cellular organisms → Bacteria → Proteobacteria	2165	Open in IMG/M
3300004479\|Ga0062595_101074351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	700	Open in IMG/M
3300004480\|Ga0062592_100020473	All Organisms → cellular organisms → Bacteria → Proteobacteria	3002	Open in IMG/M
3300005093\|Ga0062594_103236541	Not Available	511	Open in IMG/M
3300005290\|Ga0065712_10077702	All Organisms → cellular organisms → Bacteria → Proteobacteria	3454	Open in IMG/M
3300005293\|Ga0065715_10395260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	889	Open in IMG/M
3300005328\|Ga0070676_10105157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1750	Open in IMG/M
3300005330\|Ga0070690_100130158	All Organisms → cellular organisms → Bacteria → Acidobacteria	1699	Open in IMG/M
3300005330\|Ga0070690_101527090	Not Available	540	Open in IMG/M
3300005331\|Ga0070670_100088269	All Organisms → cellular organisms → Bacteria	2666	Open in IMG/M
3300005332\|Ga0066388_104826107	Not Available	686	Open in IMG/M
3300005333\|Ga0070677_10263162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	861	Open in IMG/M
3300005334\|Ga0068869_100003319	All Organisms → cellular organisms → Bacteria → Proteobacteria	9831	Open in IMG/M
3300005337\|Ga0070682_100661528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	833	Open in IMG/M
3300005354\|Ga0070675_101584851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300005356\|Ga0070674_100256702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1375	Open in IMG/M
3300005466\|Ga0070685_10033525	All Organisms → cellular organisms → Bacteria → Proteobacteria	2886	Open in IMG/M
3300005467\|Ga0070706_101282466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	672	Open in IMG/M
3300005535\|Ga0070684_100001093	All Organisms → cellular organisms → Bacteria → Proteobacteria	19440	Open in IMG/M
3300005563\|Ga0068855_101965623	Not Available	591	Open in IMG/M
3300005578\|Ga0068854_100303027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1293	Open in IMG/M
3300005615\|Ga0070702_100118931	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300005842\|Ga0068858_101198875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300006049\|Ga0075417_10143324	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300006844\|Ga0075428_100149114	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300006844\|Ga0075428_100717816	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300006846\|Ga0075430_100039185	All Organisms → cellular organisms → Bacteria → Proteobacteria	4013	Open in IMG/M
3300006846\|Ga0075430_100131271	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300006847\|Ga0075431_100702890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	989	Open in IMG/M
3300006852\|Ga0075433_11354276	Not Available	616	Open in IMG/M
3300006853\|Ga0075420_100768375	Not Available	830	Open in IMG/M
3300006854\|Ga0075425_100755658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300009101\|Ga0105247_10841662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	703	Open in IMG/M
3300009176\|Ga0105242_11203898	Not Available	777	Open in IMG/M
3300009177\|Ga0105248_10004412	All Organisms → cellular organisms → Bacteria → Proteobacteria	15572	Open in IMG/M
3300010375\|Ga0105239_13652735	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300012469\|Ga0150984_100313695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1224	Open in IMG/M
3300012469\|Ga0150984_121137875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	822	Open in IMG/M
3300012907\|Ga0157283_10083121	Not Available	820	Open in IMG/M
3300012910\|Ga0157308_10035316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1221	Open in IMG/M
3300013296\|Ga0157374_10471488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1258	Open in IMG/M
3300013297\|Ga0157378_10115290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2469	Open in IMG/M
3300013308\|Ga0157375_11620843	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	765	Open in IMG/M
3300014745\|Ga0157377_10010156	All Organisms → cellular organisms → Bacteria → Proteobacteria	4646	Open in IMG/M
3300015200\|Ga0173480_11228635	Not Available	508	Open in IMG/M
3300015371\|Ga0132258_10706625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	2538	Open in IMG/M
3300015371\|Ga0132258_12224443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1376	Open in IMG/M
3300015372\|Ga0132256_103160179	Not Available	554	Open in IMG/M
3300015373\|Ga0132257_102046721	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	739	Open in IMG/M
3300015373\|Ga0132257_104639152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	500	Open in IMG/M
3300017792\|Ga0163161_10156752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1734	Open in IMG/M
3300018422\|Ga0190265_12126998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	665	Open in IMG/M
3300019356\|Ga0173481_10486098	Not Available	625	Open in IMG/M
3300019360\|Ga0187894_10024471	All Organisms → cellular organisms → Bacteria → Proteobacteria	4099	Open in IMG/M
3300019361\|Ga0173482_10043548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1424	Open in IMG/M
3300023071\|Ga0247752_1053850	Not Available	634	Open in IMG/M
3300025893\|Ga0207682_10216569	Not Available	885	Open in IMG/M
3300025899\|Ga0207642_11130108	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300025900\|Ga0207710_10401850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	703	Open in IMG/M
3300025901\|Ga0207688_10872796	Not Available	570	Open in IMG/M
3300025907\|Ga0207645_10335802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1010	Open in IMG/M
3300025912\|Ga0207707_10077059	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300025917\|Ga0207660_11397024	Not Available	567	Open in IMG/M
3300025921\|Ga0207652_11606211	Not Available	554	Open in IMG/M
3300025926\|Ga0207659_10743026	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300025935\|Ga0207709_11392401	Not Available	581	Open in IMG/M
3300025938\|Ga0207704_10671534	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300025942\|Ga0207689_11159852	Not Available	651	Open in IMG/M
3300025961\|Ga0207712_10437386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1107	Open in IMG/M
3300025972\|Ga0207668_11300866	Not Available	654	Open in IMG/M
3300025981\|Ga0207640_10259223	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300026089\|Ga0207648_11555214	Not Available	622	Open in IMG/M
3300027880\|Ga0209481_10001985	All Organisms → cellular organisms → Bacteria → Proteobacteria	8345	Open in IMG/M
3300027907\|Ga0207428_10119980	All Organisms → cellular organisms → Bacteria → Acidobacteria	2017	Open in IMG/M
3300028597\|Ga0247820_11088576	Not Available	573	Open in IMG/M
3300028809\|Ga0247824_10846436	Not Available	568	Open in IMG/M
3300031184\|Ga0307499_10187495	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300031538\|Ga0310888_10792806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	586	Open in IMG/M
3300031547\|Ga0310887_10282072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	939	Open in IMG/M
3300031548\|Ga0307408_100166552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1756	Open in IMG/M
3300031548\|Ga0307408_100521792	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300031548\|Ga0307408_101379043	Not Available	663	Open in IMG/M
3300031731\|Ga0307405_11309752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031740\|Ga0307468_102101656	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300031854\|Ga0310904_10046294	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300031943\|Ga0310885_10150930	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300031944\|Ga0310884_10076197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1583	Open in IMG/M
3300032002\|Ga0307416_103081192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	558	Open in IMG/M
3300032005\|Ga0307411_12065735	Not Available	533	Open in IMG/M
3300032013\|Ga0310906_10016321	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300032017\|Ga0310899_10641291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	535	Open in IMG/M
3300033412\|Ga0310810_10861551	Not Available	804	Open in IMG/M
3300034663\|Ga0314784_130515	Not Available	552	Open in IMG/M
3300034819\|Ga0373958_0120533	Not Available	633	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.10%
Environmental	Environmental	41.90%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.10%
Terrestrial	Environmental → Terrestrial	41.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.05%
Cave	Environmental → Terrestrial → Cave	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.67%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.43%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.48%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	3.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.95%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.95%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2162886011	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01362400	2088090015	Soil	MDTPICRTCAKPQRGVVEFRWSEGAVVYECKECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR
MRS1b_0274.00001090	2162886011	Miscanthus Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
MBSR1b_0835.00000310	2162886012	Miscanthus Rhizosphere	AKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
JGI11643J12802_102283321	3300000890	Soil	MDTPICRTCAKPQRGVVEFRWSEGAVVYECKECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR*
soilL1_100126763	3300003267	Sugarcane Root And Bulk Soil	RWSDGDVVYECKDCGAFNVVSEIARPVTARPSHRHHLRVTREFEAPVFGAIVRASSQDEHAR*
Ga0062593_1001189204	3300004114	Soil	FLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0062593_1010274702	3300004114	Soil	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0063455_1006852992	3300004153	Soil	TGRDGADMDTPVCRTCAKLQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLSVTREFEAPLFGAIARVNSKEERAR*
Ga0062589_1000622551	3300004156	Soil	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0063356_1006260681	3300004463	Arabidopsis Thaliana Rhizosphere	GAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0062595_1010743512	3300004479	Soil	DGASLRLPRRFFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0062592_1000204735	3300004480	Soil	GETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0062594_1032365412	3300005093	Soil	CAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0065712_100777023	3300005290	Miscanthus Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0065715_103952601	3300005293	Miscanthus Rhizosphere	RGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0070676_101051574	3300005328	Miscanthus Rhizosphere	RGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0070690_1001301581	3300005330	Switchgrass Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVS
Ga0070690_1015270901	3300005330	Switchgrass Rhizosphere	WSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0070670_1000882694	3300005331	Switchgrass Rhizosphere	ICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEAPVFGAIPRSSSRQEKHAR*
Ga0066388_1048261072	3300005332	Tropical Forest Soil	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREFQAPVFGAIVRVSGKEERAR*
Ga0070677_102631623	3300005333	Miscanthus Rhizosphere	AKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0068869_1000033194	3300005334	Miscanthus Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0070682_1006615281	3300005337	Corn Rhizosphere	PPPIFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0070675_1015848512	3300005354	Miscanthus Rhizosphere	DVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR*
Ga0070674_1002567021	3300005356	Miscanthus Rhizosphere	MDTPVCRTFAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0070685_100335251	3300005466	Switchgrass Rhizosphere	SDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
Ga0070706_1012824662	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0070684_10000109318	3300005535	Corn Rhizosphere	VEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0070695_1012443602	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0068855_1019656231	3300005563	Corn Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEER
Ga0068854_1003030273	3300005578	Corn Rhizosphere	RWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0070702_1001189312	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDTPICRTCAQPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR*
Ga0068858_1011988752	3300005842	Switchgrass Rhizosphere	GDVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR*
Ga0075417_101433242	3300006049	Populus Rhizosphere	MDTPICRTCAKPQRGVVEFRWSEGAVVYECGECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR*
Ga0075428_1001491141	3300006844	Populus Rhizosphere	MDTPICRSCAKPQRGVVEFRWSDGDVVYECKDCGAFNVVSEIIRPATTRLSPRHHLRVTRTHEPPV
Ga0075428_1007178162	3300006844	Populus Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEAPVFGAIPRSSSRQEKHAR*
Ga0075430_1000391853	3300006846	Populus Rhizosphere	MDTPICRSCAKPQRGVVEFRWSDGDVVYECKDCGAFNVVSEIIRPATTRLSPRHHLRVTRTHEPPVFAAIPRSNKQEEHAR*
Ga0075430_1001312713	3300006846	Populus Rhizosphere	MDTPICRTCGKSQRGVVEFRWSDGDVVYECKDCGVFNVVSEIIRPASARPSHRHHLRVTREYETPVFGAMPRSKKQEEHAR*
Ga0075431_1007028902	3300006847	Populus Rhizosphere	MDTPICRTCGKSQRGVVEFRWSDGDVVYECKDCGVFNVVSEITRPASARLSHRHHLRVTREYETPVFGAMPRSKKQEEHAR*
Ga0075433_113542762	3300006852	Populus Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAVVRVGSKEEHAR*
Ga0075420_1007683752	3300006853	Populus Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREYETPVFGAMPRSKKQEEHAR*
Ga0075425_1007556582	3300006854	Populus Rhizosphere	AQPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR*
Ga0105247_108416622	3300009101	Switchgrass Rhizosphere	VVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0105242_112038982	3300009176	Miscanthus Rhizosphere	VEFRWSDGDVVFEWKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0105248_100044127	3300009177	Switchgrass Rhizosphere	VEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0105239_136527351	3300010375	Corn Rhizosphere	DGDVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR*
Ga0150984_1003136951	3300012469	Avena Fatua Rhizosphere	LSRDETEPIMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVVREFEAPVFGAIVRVSSKEEHVR*
Ga0150984_1211378751	3300012469	Avena Fatua Rhizosphere	MDTPVCRTCAKLQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLSVTREFEAPLFGAIARVNSKEERAR*
Ga0157283_100831212	3300012907	Soil	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0157308_100353162	3300012910	Soil	IFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0157374_104714882	3300013296	Miscanthus Rhizosphere	VEFRWSDRDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0157378_101152902	3300013297	Miscanthus Rhizosphere	VEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR*
Ga0157375_116208432	3300013308	Miscanthus Rhizosphere	AAMDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSRRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0157377_100101561	3300014745	Miscanthus Rhizosphere	VCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR*
Ga0173480_112286352	3300015200	Soil	APALQLTEAAMDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR*
Ga0132258_107066252	3300015371	Arabidopsis Rhizosphere	MDTPICRSCAQPQRGVVEFRWSDGEVVFECKDCGAFNVVSEIARPVRARPSHRHHLRVTREYEAPALGAIVRVSSKEEHVR*
Ga0132258_122244432	3300015371	Arabidopsis Rhizosphere	VEFRWSDGDVVFECKDCGAFNVVSEIARPASARPSHRHYLRVTREYDAPVLGAIVRVGSKDEHAR*
Ga0132256_1031601791	3300015372	Arabidopsis Rhizosphere	MHTPICRTCAQPQRGVVEFRWSDGEVVFECKDCGAFNVVSEIGRPVSARPSRRHHLRVTREYQAPVFGAIVRVSSKEEHAR*
Ga0132257_1020467212	3300015373	Arabidopsis Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGEVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQVPVF
Ga0132257_1046391522	3300015373	Arabidopsis Rhizosphere	RWSDGDVVFECKDCGVFNVVSEIARPASARPSHRHYLRVTREYDAPVLGAIVRVGSKDEHAR*
Ga0163161_101567521	3300017792	Switchgrass Rhizosphere	PQRGVVEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0190265_121269982	3300018422	Soil	RTSLPLPANTQHAGTELSLNTPICRTCARPQHGVVEFRWSEGAVVYECKDCGEFNEVSEIVRPARARPSRQHHLRVTLQHDLPMRGTLPSTPGQEHVR
Ga0173481_104860981	3300019356	Soil	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0187894_100244714	3300019360	Microbial Mat On Rocks	VDTPICSTCAKPQRGVVEFRWSEGAVVYECKDCGAFNEVSEIVRPVNARPSRQHHLRVTRTHDLPVFAVRSSTPTQEHAR
Ga0173482_100435481	3300019361	Soil	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0247752_10538501	3300023071	Soil	EPTMDTPVCRTCAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0207682_102165692	3300025893	Miscanthus Rhizosphere	MAANAYRLSGDCRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0207642_111301081	3300025899	Miscanthus Rhizosphere	FECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR
Ga0207710_104018502	3300025900	Switchgrass Rhizosphere	VVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0207688_108727962	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LTEAAMDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0207645_103358022	3300025907	Miscanthus Rhizosphere	CAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0207707_100770594	3300025912	Corn Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGA
Ga0207660_113970242	3300025917	Corn Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
Ga0207652_116062112	3300025921	Corn Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR
Ga0207659_107430261	3300025926	Miscanthus Rhizosphere	DVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR
Ga0207709_113924011	3300025935	Miscanthus Rhizosphere	PPIFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
Ga0207704_106715342	3300025938	Miscanthus Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGVFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0207689_111598522	3300025942	Miscanthus Rhizosphere	MDTPICRTCAQPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVTARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR
Ga0207712_104373863	3300025961	Switchgrass Rhizosphere	PIFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
Ga0207668_113008661	3300025972	Switchgrass Rhizosphere	PPSPPPIFLPGETEPTMDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAKEERAR
Ga0207640_102592232	3300025981	Corn Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0207648_115552142	3300026089	Miscanthus Rhizosphere	CAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0209481_100019859	3300027880	Populus Rhizosphere	MDTPICRTCAKPQRGVVEFRWSEGAVVYECGECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR
Ga0207428_101199803	3300027907	Populus Rhizosphere	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEK
Ga0247820_110885761	3300028597	Soil	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHA
Ga0247824_108464362	3300028809	Soil	PICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0307499_101874952	3300031184	Soil	SPKTIPRAKTELTMDTPICRTCAQPQRGVVEFRWSDGEVVFECKDCGAFNVVSEIGRPVRARPSHRHPLRVTREYEAPVFGAIVRVSSQEERAR
Ga0310888_107928062	3300031538	Soil	MDTPICRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVSARASHRHHLRVTREYDDAPVFGAIVRVGSK
Ga0310887_102820721	3300031547	Soil	ACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0307408_1001665522	3300031548	Rhizosphere	MDTPICPTCARPQRGVVEFRWSDGDVVFECKDCGAFNVVSEISRPISARPSHRHHLRVTREYQAPVFGAIARVGSQEEHTR
Ga0307408_1005217922	3300031548	Rhizosphere	MDTPICRTCAKPQRGVVEFRWSEGAVVYESKECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR
Ga0307408_1013790432	3300031548	Rhizosphere	MDTPICRTCGKSQRGVVEFRWSDGDVVYECKDCGVFNVVSEIIRPASARLSHRHHLRAAREYETPVFGAMPRSKKQEEHAR
Ga0307405_113097522	3300031731	Rhizosphere	MDTPICRTCAKPQRGVVEFRWSEGAVVYECKECGAFNEVSEITRPVSARPSRRQHLRVAREYDDTPVFGALSRVRNQEEHAR
Ga0307468_1021016562	3300031740	Hardwood Forest Soil	PQRGVVEFRWSDGDVVFECKECGAFNVVSEIGRPVRARPSHRHHLRVTREYEAPVFGAIVRVSSKEEHAR
Ga0310904_100462943	3300031854	Soil	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSAK
Ga0310904_102070541	3300031854	Soil	GAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR
Ga0310885_101509302	3300031943	Soil	MDTPICRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVSARASHRHHLRVTREYDDAPVFGAIVRVGSKEEHAR
Ga0310884_100761973	3300031944	Soil	EFRWSEGAVVYECGECGAFNEVSEITRPVSARPSRRQHLRVTREYDDTPVFGALSRVRNQEEHAR
Ga0307416_1030811922	3300032002	Rhizosphere	RTCSKPQKGVVEFLWSDGDVVYECKDCGAFNVVSEIIRPVSARPSHRHHLRVTREYEAPVFGVISGGSSKEEHAR
Ga0307411_120657351	3300032005	Rhizosphere	MDTPVCRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEISRPISARPSHRHHLRVTREYQAPVFGAIARVGSQEEHTR
Ga0310906_100163214	3300032013	Soil	MDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVSARPSHRHHLRVTREFEAPVFGAIPRSSSRQEKHAR
Ga0310899_106412911	3300032017	Soil	LPASFFPPGETEPTMDTPICRTCAKPQRGVVEFRWSDGDVVFECKDCGAFNVVSEIGRPVSARASHRHHLRVTREYDDAPVFGAIVRVGSKEEHAR
Ga0310810_108615512	3300033412	Soil	MDTPICRSCAQPQRGVVEFRWSDGEVVFECKDCGAFNVVSEITRPVRARPSHRHHLRVTREYEAPVFGAIVRVASKEE
Ga0314784_130515_291_551	3300034663	Soil	TEAAMDTPICRACAKPQRGVVEFRWSDGDVVYECKDCGVFNVVSEIGRPVNARPSHRHHLRVTREFEVPVFGAIPRSSSRQEKHAR
Ga0373958_0120533_109_306	3300034819	Rhizosphere Soil	VEFRWSDGDVVFECKDCGAFNVVSEIARPVSARPSHRHHLRVTREYQAPVFGAIVRVSGKEERAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences