Metagenome / Metatranscriptome Family F095064

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F095064
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	88 residues
Representative Sequence	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVRITDAGRQALDRPKARR
Number of Associated Samples	70
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.29 %
% of genes near scaffold ends (potentially truncated)	61.90 %
% of genes from short scaffolds (< 2000 bps)	91.43 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.190 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.762 % of family members)
Environment Ontology (ENVO)	Unclassified (68.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.82% β-sheet: 0.00% Coil/Unstructured: 43.18%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04343	DUF488	12.38
PF00313	CSD	11.43
PF01979	Amidohydro_1	3.81
PF07859	Abhydrolase_3	3.81
PF02518	HATPase_c	1.90
PF00550	PP-binding	0.95
PF04392	ABC_sub_bind	0.95
PF04430	DUF498	0.95
PF00589	Phage_integrase	0.95
PF00144	Beta-lactamase	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	12.38
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	3.81
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.95
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.95
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.95
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.95
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.19 %
Unclassified	root	N/A	23.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.57 %
Unclassified	root	N/A	23.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.76 %
Unclassified	root	N/A	23.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	35.24 %
Unclassified	root	N/A	23.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.33 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.24 %
Unclassified	root	N/A	23.81 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	10.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.90 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.24 %
Unclassified	root	N/A	23.81 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	10.48 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.24 %
Unclassified	root	N/A	23.81 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	10.48 %
Geobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Geobacillus	1.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	35.24 %
Unclassified	root	N/A	23.81 %
Mesorhizobium sp. 131-2-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	10.48 %
Geobacillus thermodenitrificans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Geobacillus → Geobacillus thermodenitrificans	1.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100389682	Not Available	602	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10116807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300000956\|JGI10216J12902_116650601	Not Available	552	Open in IMG/M
3300000956\|JGI10216J12902_119591088	Not Available	552	Open in IMG/M
3300005332\|Ga0066388_100492825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1862	Open in IMG/M
3300005332\|Ga0066388_102067648	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300005332\|Ga0066388_103520651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300005332\|Ga0066388_103967120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Geobacillus → Geobacillus thermodenitrificans	755	Open in IMG/M
3300005332\|Ga0066388_105641188	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005363\|Ga0008090_10219423	Not Available	641	Open in IMG/M
3300005363\|Ga0008090_15880467	Not Available	1035	Open in IMG/M
3300005468\|Ga0070707_101364385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300005471\|Ga0070698_101508461	Not Available	624	Open in IMG/M
3300005518\|Ga0070699_100043834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3872	Open in IMG/M
3300005713\|Ga0066905_100171187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1590	Open in IMG/M
3300005764\|Ga0066903_101441045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1296	Open in IMG/M
3300005764\|Ga0066903_104193600	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005764\|Ga0066903_104343374	Not Available	757	Open in IMG/M
3300005764\|Ga0066903_105595784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300005764\|Ga0066903_107627334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Geobacillus → Geobacillus thermodenitrificans	557	Open in IMG/M
3300006854\|Ga0075425_101593631	Not Available	736	Open in IMG/M
3300009792\|Ga0126374_11147837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300010043\|Ga0126380_10093132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1785	Open in IMG/M
3300010046\|Ga0126384_10932505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300010046\|Ga0126384_11646796	Not Available	605	Open in IMG/M
3300010361\|Ga0126378_12991083	Not Available	539	Open in IMG/M
3300010362\|Ga0126377_12615162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300010362\|Ga0126377_12641388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300010376\|Ga0126381_103677012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300010398\|Ga0126383_10749365	Not Available	1057	Open in IMG/M
3300010398\|Ga0126383_11300395	Not Available	817	Open in IMG/M
3300010868\|Ga0124844_1043535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1534	Open in IMG/M
3300016270\|Ga0182036_10344983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	1146	Open in IMG/M
3300016270\|Ga0182036_10946174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300016294\|Ga0182041_10031213	All Organisms → cellular organisms → Bacteria → Proteobacteria	3413	Open in IMG/M
3300016319\|Ga0182033_10598322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	958	Open in IMG/M
3300016319\|Ga0182033_10905333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	781	Open in IMG/M
3300016319\|Ga0182033_11144638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300016319\|Ga0182033_11525018	Not Available	603	Open in IMG/M
3300016341\|Ga0182035_11529963	Not Available	601	Open in IMG/M
3300016357\|Ga0182032_11358804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300016371\|Ga0182034_10833707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	790	Open in IMG/M
3300016387\|Ga0182040_11598449	Not Available	555	Open in IMG/M
3300016404\|Ga0182037_10752571	Not Available	837	Open in IMG/M
3300016422\|Ga0182039_11670242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300016445\|Ga0182038_11050286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300021560\|Ga0126371_10789937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1096	Open in IMG/M
3300031543\|Ga0318516_10574514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031545\|Ga0318541_10076627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1763	Open in IMG/M
3300031545\|Ga0318541_10187320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	1143	Open in IMG/M
3300031561\|Ga0318528_10130616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	1331	Open in IMG/M
3300031561\|Ga0318528_10675074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300031564\|Ga0318573_10371864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	768	Open in IMG/M
3300031572\|Ga0318515_10275313	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031572\|Ga0318515_10424937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300031573\|Ga0310915_10578340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	796	Open in IMG/M
3300031573\|Ga0310915_11246107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300031679\|Ga0318561_10439066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300031681\|Ga0318572_10639701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300031719\|Ga0306917_10052454	All Organisms → cellular organisms → Bacteria → Proteobacteria	2750	Open in IMG/M
3300031744\|Ga0306918_10435591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	1023	Open in IMG/M
3300031744\|Ga0306918_10661966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300031770\|Ga0318521_10715462	Not Available	608	Open in IMG/M
3300031777\|Ga0318543_10447783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300031781\|Ga0318547_10306853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	964	Open in IMG/M
3300031781\|Ga0318547_10874000	Not Available	561	Open in IMG/M
3300031782\|Ga0318552_10388324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300031796\|Ga0318576_10168094	Not Available	1027	Open in IMG/M
3300031798\|Ga0318523_10521575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031821\|Ga0318567_10078834	All Organisms → cellular organisms → Bacteria → Proteobacteria	1752	Open in IMG/M
3300031821\|Ga0318567_10521155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300031833\|Ga0310917_10027320	All Organisms → cellular organisms → Bacteria	3343	Open in IMG/M
3300031879\|Ga0306919_10118925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1888	Open in IMG/M
3300031879\|Ga0306919_11394680	Not Available	529	Open in IMG/M
3300031890\|Ga0306925_10247490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1921	Open in IMG/M
3300031890\|Ga0306925_10642423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300031890\|Ga0306925_12171552	Not Available	517	Open in IMG/M
3300031894\|Ga0318522_10176188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	808	Open in IMG/M
3300031896\|Ga0318551_10842783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300031897\|Ga0318520_10363200	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300031910\|Ga0306923_10086497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3520	Open in IMG/M
3300031910\|Ga0306923_10181174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2406	Open in IMG/M
3300031912\|Ga0306921_10124926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3000	Open in IMG/M
3300031942\|Ga0310916_11141601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300031942\|Ga0310916_11739442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300031945\|Ga0310913_10039654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3035	Open in IMG/M
3300031945\|Ga0310913_10188291	Not Available	1438	Open in IMG/M
3300031947\|Ga0310909_10809542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-1	773	Open in IMG/M
3300032035\|Ga0310911_10201706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1131	Open in IMG/M
3300032039\|Ga0318559_10356961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300032039\|Ga0318559_10414129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300032041\|Ga0318549_10128137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1121	Open in IMG/M
3300032044\|Ga0318558_10137361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300032055\|Ga0318575_10314853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300032063\|Ga0318504_10290911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300032063\|Ga0318504_10439113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300032063\|Ga0318504_10567937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300032065\|Ga0318513_10036869	All Organisms → cellular organisms → Bacteria	2140	Open in IMG/M
3300032068\|Ga0318553_10372085	Not Available	748	Open in IMG/M
3300032090\|Ga0318518_10371567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300032091\|Ga0318577_10189664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300032091\|Ga0318577_10344618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300033289\|Ga0310914_10822173	Not Available	827	Open in IMG/M
3300033290\|Ga0318519_10279167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300033290\|Ga0318519_10939918	Not Available	535	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.05%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.76%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	69.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003896821	3300000364	Soil	MAEDPRRSAERRRALELLAASPDGCTAAILMAHGFKSDVLVELINGGHASVTTERVTAGDREMEVTRVQITNAGRHALEQPKARR*
AF_2010_repII_A001DRAFT_101168072	3300000793	Forest Soil	LADLVSRAYIQCMAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR*
JGI10216J12902_1166506011	3300000956	Soil	LTLASRPARPPARLADLVNRAYIQRTTEMAEDPRRSAERRRALELLAASPDGCTAAILMAHGFKSDVLVELINGGHASVTTERVTAGDREMEVTRVQITNAGRHALEQPKARR*
JGI10216J12902_1195910881	3300000956	Soil	MAEDPRRSAERWRALESLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTARVIADDRAMEVTRVRITDAGTQ
Ga0066388_1004928253	3300005332	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR*
Ga0066388_1020676483	3300005332	Tropical Forest Soil	MADMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGR
Ga0066388_1035206513	3300005332	Tropical Forest Soil	MAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR*
Ga0066388_1039671201	3300005332	Tropical Forest Soil	MADMAEDPRCSAERRRALELLAASADGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLDRPKAQR*
Ga0066388_1056411882	3300005332	Tropical Forest Soil	MAEMAEDPRRSAERQRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDR
Ga0008090_102194232	3300005363	Tropical Rainforest Soil	MAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQI
Ga0008090_158804671	3300005363	Tropical Rainforest Soil	LARLADLVSRAYIQCMAEMAEDPRRSAEGRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR*
Ga0070707_1013643852	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPPHACLAAALPFLPRLADLVSRAYIQGMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDQPKARR*
Ga0070698_1015084611	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	RRRALELLAASPDGCTAAILMAHGFKSDVLVELINGGHASVTTERVTAGDREMEVTRVQITNAGRHTLEQPKARR*
Ga0070699_1000438343	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDQPKARR*
Ga0066905_1001711871	3300005713	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVRITDAGRQALDRPKARR*
Ga0066903_1014410453	3300005764	Tropical Forest Soil	MAEDPRRSAERRRALELLAASPHGCTAAILLAHGFKSDQLVELINAGLASVTTERVIAGDRAMQVTRARITDAGRQVLDRPKAQR*
Ga0066903_1041936002	3300005764	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQ
Ga0066903_1043433742	3300005764	Tropical Forest Soil	LARLADRVSRAYIQCMADMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGR
Ga0066903_1055957841	3300005764	Tropical Forest Soil	MAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERGVADDRAMQVTRVRITDAG
Ga0066903_1076273341	3300005764	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGR
Ga0075425_1015936312	3300006854	Populus Rhizosphere	MAEMAEDPRRSARRWRALELLAAWPDGCTAAILLAHGFTSDPLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDRPKARR*
Ga0126374_111478371	3300009792	Tropical Forest Soil	MAEMAEDPRRSAERWRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDRPKARR*
Ga0126380_100931321	3300010043	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDRPKARR*
Ga0126384_109325051	3300010046	Tropical Forest Soil	MAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVRITDAGRQALDRPKARR*
Ga0126384_116467961	3300010046	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIADDRAIQVTRVQITDAGRQALDRPKARR*
Ga0126378_129910831	3300010361	Tropical Forest Soil	MAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRV
Ga0126377_126151622	3300010362	Tropical Forest Soil	DPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVRITDAGRQALDRPKARR*
Ga0126377_126413882	3300010362	Tropical Forest Soil	RRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDRPKARR*
Ga0126381_1036770121	3300010376	Tropical Forest Soil	ALELLAASPDGCTAAILLAHGFKSDRLVELINVGLASVTTERVIADDRAIQVTRVQITDAGRQALDRPKARR*
Ga0126383_107493652	3300010398	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMKVTRVRITDAGRQA
Ga0126383_113003951	3300010398	Tropical Forest Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINVGLASVTTERVIADDRAIQVTRVQITDAGRQALDRPKARR*
Ga0124844_10435351	3300010868	Tropical Forest Soil	TSNAWRKWQRARAATPKRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR*
Ga0182036_103449832	3300016270	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDWAIQVTRVQITDAGRQALDRPKARR
Ga0182036_109461741	3300016270	Soil	LLLCRRYRAAVGFEGNAMRKRRVASIWARAYIQCMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0182041_100312134	3300016294	Soil	MAEMAEDPRLSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0182033_105983221	3300016319	Soil	QRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0182033_109053331	3300016319	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGR
Ga0182033_111446382	3300016319	Soil	YIQCMAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDWAIQVTRVQITDAGRQALDRPKARR
Ga0182033_115250181	3300016319	Soil	MPMPACLAAARFRALARLADLVSRAYIQCMAEMAEDPRRSAERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQA
Ga0182035_115299631	3300016341	Soil	MAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0182032_113588041	3300016357	Soil	LARLADLVSRAYIQCMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0182034_108337071	3300016371	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKAR
Ga0182040_115984492	3300016387	Soil	RPPLHTGHADVSLARLADLVSRAYIQCMAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0182037_107525711	3300016404	Soil	RRSVERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0182039_116702422	3300016422	Soil	MAEIAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0182038_110502862	3300016445	Soil	MAEDPRRSAERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0126371_107899373	3300021560	Tropical Forest Soil	MAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318516_105745142	3300031543	Soil	MAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318541_100766274	3300031545	Soil	AEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318541_101873203	3300031545	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318528_101306163	3300031561	Soil	MAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDWAIQVTRVQITDAGRQALDRPKARR
Ga0318528_106750741	3300031561	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMQVTRVRITDGG
Ga0318573_103718641	3300031564	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALD
Ga0318515_102753133	3300031572	Soil	AYIQCMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0318515_104249372	3300031572	Soil	MAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0310915_105783401	3300031573	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALD
Ga0310915_112461072	3300031573	Soil	RRSPERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318561_104390661	3300031679	Soil	CGKQFERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318572_106397011	3300031681	Soil	RIPGSTRRSRKQSLHPMLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0306917_100524542	3300031719	Soil	MAEIAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0306918_104355913	3300031744	Soil	MAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0306918_106619661	3300031744	Soil	ACLAAGALPFLARLADLVSRAYIQCMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0318521_107154621	3300031770	Soil	PGSTRRSRKQSLHPMLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318543_104477832	3300031777	Soil	LVSRASRAYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318547_103068533	3300031781	Soil	MAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318547_108740001	3300031781	Soil	MAEMAEDPPRSVERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALD
Ga0318552_103883241	3300031782	Soil	AYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318576_101680942	3300031796	Soil	RRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0318523_105215751	3300031798	Soil	YIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318567_100788341	3300031821	Soil	PGHSKPAGPHRLRVADLVSRAYIQCMAEIAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0318567_105211551	3300031821	Soil	RRGEGAISSRLADLVSRASRAYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0310917_100273204	3300031833	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0306919_101189253	3300031879	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0306919_113946802	3300031879	Soil	SRTLPPLARLADLVSRAYIQCMAEMAEDPPRSVERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0306925_102474903	3300031890	Soil	MPMPACLAAARFRALARLADLVSRAYIQCMAEMAEDPRRSAERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0306925_106424233	3300031890	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0306925_121715522	3300031890	Soil	ERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0318522_101761881	3300031894	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318551_108427832	3300031896	Soil	MAEMAEDPQRRRALELLAASRDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318520_103632002	3300031897	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPNARR
Ga0306923_100864978	3300031910	Soil	MAEMAEDPRRSAERRRALELLAASPAGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR
Ga0306923_101811745	3300031910	Soil	RRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0306921_101249261	3300031912	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRLKARR
Ga0310916_111416012	3300031942	Soil	MAEIAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLDRPKAQR
Ga0310916_117394421	3300031942	Soil	AEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRITDAGRQALDRLKARR
Ga0310913_100396548	3300031945	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMQVTRVRITDGGRQALDRPKARR
Ga0310913_101882913	3300031945	Soil	MPMPACLAAARFRALARLADLVSRAYIQCMAEMAEDPRRSAERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPK
Ga0310909_108095421	3300031947	Soil	MAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDWAIQVTRVQIT
Ga0310911_102017063	3300032035	Soil	ASRAYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318559_103569613	3300032039	Soil	IQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318559_104141292	3300032039	Soil	IQCMAKMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318549_101281373	3300032041	Soil	QCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318558_101373613	3300032044	Soil	MAKMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318575_103148531	3300032055	Soil	AGAPRRGEGAISSRLADLVSRASRAYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318504_102909111	3300032063	Soil	HADVSLARLADLVSRAYIQCMAEMAEGPRRNAERRRALELLAASSDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318504_104391131	3300032063	Soil	MAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKA
Ga0318504_105679371	3300032063	Soil	AEDPRRSAERRRLAASPDGCTAAILLAHGFKSDRLVELINAVIAGDRAIQVTRVQITDAGRQALDRPKARR
Ga0318513_100368695	3300032065	Soil	MLAEMAEGPRRNAERRRALELLAASPDGCTAAILLAHGFKSYRLVELINAGLASVTTERVIAGDWAIQVTRVQITDAGRQALDRPKARR
Ga0318553_103720852	3300032068	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMEVTRVRI
Ga0318518_103715672	3300032090	Soil	MAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLDRPKAQR
Ga0318577_101896643	3300032091	Soil	ADLVSRASRAYIQCMAEMAEDPQRRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318577_103446182	3300032091	Soil	MAEMAEDPRRSAERRRALELLAASPHGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQALDRPKAQR
Ga0310914_108221733	3300033289	Soil	HSKPAGPHRLRLADLVSRAYIQCMAEIAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVIAGDRAMQVTRVRITDAGRQVLERPKAQR
Ga0318519_102791673	3300033290	Soil	DPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVSTERVVADDRAMQVTRVRITDAGRQALARPKAWR
Ga0318519_109399181	3300033290	Soil	AYIQCMAEMAEDPRRSAERRRALELLAASPDGCTAAILLAHGFKSDRLVELINAGLASVTTERVVAGDRAMEVTRVRITDAGRQALDRPKARR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095064

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences