Metagenome / Metatranscriptome Family F095054

Basic Information
Family ID	F095054
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	106 residues
Representative Sequence	MPYGYAGVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Number of Associated Samples	72
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (91.429 % of family members)
Environment Ontology (ENVO)	Unclassified (91.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.048 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.67% β-sheet: 7.50% Coil/Unstructured: 40.83%
Feature Viewer

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Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00589	Phage_integrase	49.52
PF11335	DUF3137	0.95
PF12804	NTP_transf_3	0.95
PF06945	DUF1289	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.95

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.05%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	91.43%
Coastal	Environmental → Aquatic → Marine → Coastal	4.76%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.86%
River	Environmental → Aquatic → Freshwater → River	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	91.43%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	91.43%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	2.86%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.86%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.95%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300016731	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016732	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101403AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016745	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041411BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016751	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020053	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041401AS metaG (spades assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020184	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022907	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023176	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG	Environmental	Open in IMG/M
3300023178	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300028115	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501CT (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066825_102216701	3300005510	Marine	MPYGYAGVLTKMLLRLTNTLVATIWMLICSAALANEQNKSTSELYNGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERASVLPVFSDSMLIAMGKKWIVDNGYTDR
Ga0078893_104227052	3300005837	Marine Surface Water	MSKTKAPQSYTNSLLPKEQSALCAVSAMMIEPKDEAMSELHLKDFRERANVLPIFSDGMLIAMGKKWIVDNGYTDRIPDVYVICKG*
Ga0066377_102048811	3300005934	Marine	VATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG*
Ga0075479_104283872	3300006870	Aqueous	ICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG*
Ga0182094_11443751	3300016731	Salt Marsh	MPYGYAGVLNKMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0182057_14056421	3300016732	Salt Marsh	TKMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGILIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0182093_12792571	3300016745	Salt Marsh	KMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0182078_108945992	3300016747	Salt Marsh	MPYGYAGVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPIFSDGMLIAMGKKWIVDNGYTDRIPEVYAICKG
Ga0182062_10040541	3300016751	Salt Marsh	MPYDYAGVLTKMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0182095_14441142	3300016791	Salt Marsh	GLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYDDRVYDVYAI
Ga0182095_15494682	3300016791	Salt Marsh	VATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181565_102796922	3300017818	Salt Marsh	MPYCYAGVLTNMPSRLTNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDELMSKLHLKEFRERANVLPVFSDGILIATGKKWIVDNGYTDRIPDVYAICKG
Ga0181565_102851161	3300017818	Salt Marsh	ANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181565_106860411	3300017818	Salt Marsh	MPYCLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGK
Ga0181565_108234162	3300017818	Salt Marsh	LYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181552_100742201	3300017824	Salt Marsh	MPYGYAGVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181552_105916321	3300017824	Salt Marsh	MPYGLAGVLTKMMLRLTNTLVAAILVLICSVALANGEDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLKHFREKAKVLPIFSDGMLIAMGKK
Ga0181584_103277572	3300017949	Salt Marsh	MLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181584_103598462	3300017949	Salt Marsh	LPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLSVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181584_106154941	3300017949	Salt Marsh	MPYCYAGVLTNMPSRLTNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181607_106368492	3300017950	Salt Marsh	MPYGYAGVLTIMLLRLTNTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181607_107508571	3300017950	Salt Marsh	MPYGYAGVLTKMLLRLTHTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDN
Ga0181577_102533012	3300017951	Salt Marsh	MPYCLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181577_102820291	3300017951	Salt Marsh	EQDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLQHFREKANVLPIFSDGILIAMGEKWIVDNAYDDRVYDVYAICKG
Ga0181583_102711721	3300017952	Salt Marsh	MPCGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVENGYKDRVYDIYAICKS
Ga0181583_103325371	3300017952	Salt Marsh	LMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLSVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181583_107822091	3300017952	Salt Marsh	EMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181580_103484891	3300017956	Salt Marsh	MPSRLTNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181580_104696102	3300017956	Salt Marsh	MPYGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181580_107757742	3300017956	Salt Marsh	MPYGYAGVLTKMLLRLTNTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181571_103036631	3300017957	Salt Marsh	MPYGLAGVLTKMMLRLTNTLVAAILVLICSVALANEEDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLKHFREKAKVLPIFSDGMLIAMGKKWIVDNGYTDRISDVYAICKG
Ga0181571_108813582	3300017957	Salt Marsh	AALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLSVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181582_106180351	3300017958	Salt Marsh	MPYCYAGVLTNMPSRLTNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSVLCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181581_105397461	3300017962	Salt Marsh	MPYCLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIV
Ga0181589_104584621	3300017964	Salt Marsh	MPCGLAGVLTNMFLKMTKTLIATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLQHFREKANVLPIFSDGILIAMGKKWIVDNGYDDRVYDVYAICKG
Ga0181589_110127161	3300017964	Salt Marsh	MPHSLAGVLTIMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181590_102375632	3300017967	Salt Marsh	MPYGLVGVLTNMLSRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181587_105977772	3300017968	Salt Marsh	ATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181587_107502992	3300017968	Salt Marsh	LLPKEQSALCAVSAIMVEPKDEPMSKLHLQHFREKANVLPIFSDGILIAMGKKWIVDNGYDDRVYDVYAICKG
Ga0181585_101958092	3300017969	Salt Marsh	MPCGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181576_106835282	3300017985	Salt Marsh	MPYGLAGVLTKMMLRLTNTLVAAILVLICSVALANEEDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYA
Ga0181569_101786312	3300017986	Salt Marsh	MLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181569_109164921	3300017986	Salt Marsh	MPYGYTGVLTKMMLRLTNTLVAAILVLICSVALANEEDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLKHFREKAKVLPIFSDGMLIAMGKKWIVDNGYTDRISDVYAICKG
Ga0181600_101980081	3300018036	Salt Marsh	MLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181600_102708162	3300018036	Salt Marsh	MPYGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181579_102191342	3300018039	Salt Marsh	MPYGYAGVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181579_102287621	3300018039	Salt Marsh	MPCGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181579_104554272	3300018039	Salt Marsh	MPYGYAGVLTKMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181579_106342251	3300018039	Salt Marsh	NLIAMPYCYAGVLTKMLSRLTNTFVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181601_102024442	3300018041	Salt Marsh	MPYGLAGVLTNMLLRPTTSLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181606_107206681	3300018048	Salt Marsh	MPYGYAGVLNKMLLRLTNTLVATILMLICSAALANEQDKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDR
Ga0181561_101179602	3300018410	Salt Marsh	TSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181560_105029512	3300018413	Salt Marsh	MLLRPTTSLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181553_101549412	3300018416	Salt Marsh	MPYGCAGVLNIMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181553_106318351	3300018416	Salt Marsh	MPYGLAGVLTNMLLRPTTSLVATILLSIYSAVQANEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKDFREKANVLPIFSDGILIAMGKKWIVDNGY
Ga0181558_102741091	3300018417	Salt Marsh	MPYGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQYALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0181567_101860201	3300018418	Salt Marsh	HSVNIFVMPYGYTGVLTKMMLRLTNTLVAAILVLICSVALANEEDKSTSELYNGLLPKEQSALCAVSAIMIEPKDEPMSKLHLKHFREKAKVLPIFSDGMLIAMGKKWIVDNGYTDRISDVYAICKG
Ga0181567_102807461	3300018418	Salt Marsh	EQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181591_103222702	3300018424	Salt Marsh	MPCGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYENRVYDVYAICKG
Ga0181591_106161811	3300018424	Salt Marsh	MPYGYAGVLTIMLLRLTNTLVATILMLICSAALANEQDKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAI
Ga0181566_106019661	3300018426	Salt Marsh	MPYCYAGVLTNMPSRLTNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGILIATGKKWIVDNGYTDRIPDVYAICKG
Ga0181566_109267971	3300018426	Salt Marsh	MPYGYAGVLTIMLLRLTNTLVVTILMLICSAALANEQDKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDAMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181568_103988203	3300018428	Salt Marsh	TSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181568_109255892	3300018428	Salt Marsh	MPYGYAGVLTKMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181568_114572222	3300018428	Salt Marsh	TNTLVATILVLSCTTALANEQSKSTSEMYHNLLPKEQSALCAVSALMVEPKDEMMSKLHLKEFRERANVLPVFSDGMLIAMGKKWIVDNGYIDRIPDVYAICKG
Ga0181564_104814172	3300018876	Salt Marsh	MPYGLAGVLTNMLLRPTTSLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0182058_15418741	3300019283	Salt Marsh	MPYGYAGVLTNMLLRMTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPEVYAICKG
Ga0194023_11032132	3300019756	Freshwater	LANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181595_100813671	3300020053	Salt Marsh	AGVLTKMLLRLTHTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181575_101348211	3300020055	Salt Marsh	TNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181575_101688222	3300020055	Salt Marsh	LIVMPYGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181574_102176691	3300020056	Salt Marsh	SELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181596_100840492	3300020177	Salt Marsh	MPYGYAGVLTKMLLRLTHTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181573_101572611	3300020184	Salt Marsh	RPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0181578_101977472	3300020189	Salt Marsh	STALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181578_104305031	3300020189	Salt Marsh	NLIAMPYGYAGVLTKMLLRLTNTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181604_101360642	3300020191	Salt Marsh	GVLNIMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181570_100511266	3300020207	Salt Marsh	LANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181557_10895751	3300020601	Salt Marsh	SELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0181557_11211371	3300020601	Salt Marsh	GVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0213867_11237582	3300021335	Seawater	ANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0213860_102943351	3300021368	Seawater	MPYGLVGVLTNMLSRPTTTLVATILLSIYSAVQADEQNKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0213865_102423061	3300021373	Seawater	SVNLIAMPYGYAGVLTNMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255756_10821561	3300022905	Salt Marsh	GYAGVLTNMLLRMTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255775_11766822	3300022907	Salt Marsh	ILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255753_10206845	3300022926	Salt Marsh	MPYGYAGVLTIMLLRLTNTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTD
Ga0255769_100266962	3300022927	Salt Marsh	MPYGYAGVLTKMLLRLTHTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255781_100148383	3300022934	Salt Marsh	MLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255780_103002331	3300022935	Salt Marsh	MPHSLAGVLTIMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYEDRVYDVYAICKG
Ga0255774_103432822	3300023087	Salt Marsh	EQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255774_104399791	3300023087	Salt Marsh	ANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLSVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255751_105466611	3300023116	Salt Marsh	VMPCGLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICK
Ga0255757_103989112	3300023117	Salt Marsh	QHSVNLIAMPYCLAGVLTNMLLRPTTTLVATILLSIYSAVQADEQDKSTSELYNGLLPKEQSALCAVSAIMVEPKDEPMSKLHLKHFREKANVLPIFSDGILIAMGKKWIVDNGYKDRVYDVYAICKG
Ga0255761_100894141	3300023170	Salt Marsh	NEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255761_104668681	3300023170	Salt Marsh	ELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255766_101218731	3300023172	Salt Marsh	MPYGYAGVLTIMLLRLTNTLVATILMLICSTALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255776_103980411	3300023173	Salt Marsh	MPYGYAGVLTKMLLRLTNTLVATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDAMLIA
Ga0255777_100545665	3300023175	Salt Marsh	MPYGYAGVLTNMLLRMTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255772_101451941	3300023176	Salt Marsh	NEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255759_101950042	3300023178	Salt Marsh	ICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0255768_101109154	3300023180	Salt Marsh	KSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0233451_100520261	3300024301	Salt Marsh	TLVATILMIVCSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0233451_103275051	3300024301	Salt Marsh	MPYGCAGVLNIMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPEVYAICKG
Ga0208880_11050331	3300026085	Marine	VATILMLICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKFHLKEFRKRAKVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG
Ga0233450_103696831	3300028115	Salt Marsh	AGVLNIMLLRLTNTLVATILMIICSAALANEQNKSTSELYDGLLPKEQSALCAVSAMMIEPKDETMSKLHLKDFRERANVLPVFSDGMLIAMGKKWIVDNGYTDRIPDVYAICKG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F095054

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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