Metagenome / Metatranscriptome Family F094986

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094986
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	91 residues
Representative Sequence	MGAIIVYFHAPHGATKDEALHLRPDFKKVFGILVESLSAERTSYPGDDLRANSSSRVHHPENPKLLGAIGTPGDELIGHEALSFSDIR
Number of Associated Samples	73
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	10.48 %
% of genes near scaffold ends (potentially truncated)	47.62 %
% of genes from short scaffolds (< 2000 bps)	77.14 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.381 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (63.809 % of family members)
Environment Ontology (ENVO)	Unclassified (57.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.714 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.45% β-sheet: 12.07% Coil/Unstructured: 84.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13545	HTH_Crp_2	2.86
PF00072	Response_reg	1.90
PF13620	CarboxypepD_reg	1.90
PF07238	PilZ	1.90
PF00881	Nitroreductase	1.90
PF13817	DDE_Tnp_IS66_C	0.95
PF06439	3keto-disac_hyd	0.95
PF07366	SnoaL	0.95
PF04185	Phosphoesterase	0.95
PF11867	DUF3387	0.95
PF02518	HATPase_c	0.95
PF02321	OEP	0.95
PF00076	RRM_1	0.95
PF08308	PEGA	0.95
PF03853	YjeF_N	0.95
PF00903	Glyoxalase	0.95
PF13519	VWA_2	0.95
PF04471	Mrr_cat	0.95
PF01152	Bac_globin	0.95
PF04041	Glyco_hydro_130	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0062	NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate epimerase domain	Nucleotide transport and metabolism [F]	0.95
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.95
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.95
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
All Organisms	root	All Organisms	47.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
cellular organisms	root	All Organisms → cellular organisms	46.67 %
Viruses	superkingdom	All Organisms → Viruses	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.33 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.81 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.81 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2.86 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.48 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.81 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.95 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10177630	Not Available	863	Open in IMG/M
3300002907\|JGI25613J43889_10063404	Not Available	1012	Open in IMG/M
3300002914\|JGI25617J43924_10043917	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M
3300002917\|JGI25616J43925_10046171	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300002917\|JGI25616J43925_10170638	Not Available	858	Open in IMG/M
3300002917\|JGI25616J43925_10210176	Not Available	747	Open in IMG/M
3300004080\|Ga0062385_10001994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5616	Open in IMG/M
3300004082\|Ga0062384_100476533	Not Available	822	Open in IMG/M
3300004635\|Ga0062388_100082759	Not Available	2236	Open in IMG/M
3300004635\|Ga0062388_100150696	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005468\|Ga0070707_100621542	Not Available	1043	Open in IMG/M
3300005471\|Ga0070698_100235092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1765	Open in IMG/M
3300005552\|Ga0066701_10143948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1431	Open in IMG/M
3300007255\|Ga0099791_10038633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2114	Open in IMG/M
3300007255\|Ga0099791_10240640	Not Available	857	Open in IMG/M
3300007258\|Ga0099793_10620871	Not Available	542	Open in IMG/M
3300007265\|Ga0099794_10455049	Not Available	671	Open in IMG/M
3300009038\|Ga0099829_10007329	All Organisms → cellular organisms → Bacteria	6897	Open in IMG/M
3300009038\|Ga0099829_10455641	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300009038\|Ga0099829_10757383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	807	Open in IMG/M
3300009038\|Ga0099829_11063838	Not Available	671	Open in IMG/M
3300009038\|Ga0099829_11651503	Not Available	528	Open in IMG/M
3300009038\|Ga0099829_11690936	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300009088\|Ga0099830_10458862	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300009090\|Ga0099827_10351350	Not Available	1254	Open in IMG/M
3300009143\|Ga0099792_10240829	All Organisms → cellular organisms → Bacteria → Acidobacteria	1049	Open in IMG/M
3300009522\|Ga0116218_1517911	Not Available	531	Open in IMG/M
3300010379\|Ga0136449_100425147	All Organisms → Viruses → Predicted Viral	2344	Open in IMG/M
3300011089\|Ga0138573_1281762	Not Available	565	Open in IMG/M
3300011120\|Ga0150983_10804530	Not Available	523	Open in IMG/M
3300011120\|Ga0150983_15778493	Not Available	708	Open in IMG/M
3300011269\|Ga0137392_10163216	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300011269\|Ga0137392_10694000	Not Available	843	Open in IMG/M
3300011270\|Ga0137391_10370092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300011271\|Ga0137393_10001086	All Organisms → cellular organisms → Bacteria → Acidobacteria	17094	Open in IMG/M
3300011271\|Ga0137393_10379927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300011271\|Ga0137393_11771690	Not Available	506	Open in IMG/M
3300012096\|Ga0137389_10026386	All Organisms → cellular organisms → Bacteria	4159	Open in IMG/M
3300012096\|Ga0137389_10604870	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300012189\|Ga0137388_10237131	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300012189\|Ga0137388_11050391	Not Available	751	Open in IMG/M
3300012189\|Ga0137388_11605114	Not Available	586	Open in IMG/M
3300012199\|Ga0137383_10047675	All Organisms → cellular organisms → Bacteria → Acidobacteria	3055	Open in IMG/M
3300012200\|Ga0137382_10000020	All Organisms → cellular organisms → Bacteria	61613	Open in IMG/M
3300012200\|Ga0137382_10004248	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6899	Open in IMG/M
3300012202\|Ga0137363_10013591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5284	Open in IMG/M
3300012202\|Ga0137363_10121856	All Organisms → cellular organisms → Bacteria → Acidobacteria	2013	Open in IMG/M
3300012202\|Ga0137363_11037111	Not Available	697	Open in IMG/M
3300012202\|Ga0137363_11063635	Not Available	688	Open in IMG/M
3300012202\|Ga0137363_11730320	Not Available	518	Open in IMG/M
3300012203\|Ga0137399_10231070	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300012205\|Ga0137362_10555564	Not Available	991	Open in IMG/M
3300012205\|Ga0137362_11538453	Not Available	552	Open in IMG/M
3300012205\|Ga0137362_11710847	Not Available	516	Open in IMG/M
3300012207\|Ga0137381_10076460	All Organisms → cellular organisms → Bacteria → Acidobacteria	2807	Open in IMG/M
3300012209\|Ga0137379_10018760	All Organisms → cellular organisms → Bacteria	6641	Open in IMG/M
3300012210\|Ga0137378_11169886	Not Available	685	Open in IMG/M
3300012211\|Ga0137377_10022320	All Organisms → cellular organisms → Bacteria	5617	Open in IMG/M
3300012361\|Ga0137360_10022548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4231	Open in IMG/M
3300012362\|Ga0137361_10147029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2103	Open in IMG/M
3300012362\|Ga0137361_10443420	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300012362\|Ga0137361_10899626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300012362\|Ga0137361_11646462	Not Available	562	Open in IMG/M
3300012363\|Ga0137390_10329394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300012363\|Ga0137390_11081014	Not Available	752	Open in IMG/M
3300012683\|Ga0137398_10673879	Not Available	718	Open in IMG/M
3300012685\|Ga0137397_10031507	All Organisms → cellular organisms → Bacteria	3778	Open in IMG/M
3300012917\|Ga0137395_10102034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1907	Open in IMG/M
3300012917\|Ga0137395_10396798	Not Available	987	Open in IMG/M
3300012922\|Ga0137394_10431054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300012923\|Ga0137359_10169627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1948	Open in IMG/M
3300012923\|Ga0137359_11056701	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300012924\|Ga0137413_11224974	Not Available	599	Open in IMG/M
3300012925\|Ga0137419_10722336	Not Available	810	Open in IMG/M
3300015242\|Ga0137412_10105425	All Organisms → cellular organisms → Bacteria	2290	Open in IMG/M
3300015264\|Ga0137403_10336001	Not Available	1400	Open in IMG/M
3300017933\|Ga0187801_10465267	Not Available	532	Open in IMG/M
3300020199\|Ga0179592_10371260	Not Available	627	Open in IMG/M
3300021086\|Ga0179596_10047768	Not Available	1759	Open in IMG/M
3300021475\|Ga0210392_10744350	Not Available	731	Open in IMG/M
3300026319\|Ga0209647_1195005	Not Available	720	Open in IMG/M
3300026320\|Ga0209131_1022978	All Organisms → cellular organisms → Bacteria	3725	Open in IMG/M
3300026467\|Ga0257154_1023594	Not Available	904	Open in IMG/M
3300026494\|Ga0257159_1039833	Not Available	791	Open in IMG/M
3300026494\|Ga0257159_1056416	Not Available	670	Open in IMG/M
3300026515\|Ga0257158_1093537	Not Available	589	Open in IMG/M
3300026551\|Ga0209648_10120124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	2122	Open in IMG/M
3300026551\|Ga0209648_10604876	Not Available	603	Open in IMG/M
3300026557\|Ga0179587_10657274	Not Available	690	Open in IMG/M
3300027643\|Ga0209076_1002550	All Organisms → cellular organisms → Bacteria → Acidobacteria	3972	Open in IMG/M
3300027655\|Ga0209388_1038112	Not Available	1384	Open in IMG/M
3300027671\|Ga0209588_1034608	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300027829\|Ga0209773_10303083	Not Available	667	Open in IMG/M
3300027846\|Ga0209180_10280670	Not Available	956	Open in IMG/M
3300027846\|Ga0209180_10356903	Not Available	833	Open in IMG/M
3300027875\|Ga0209283_10013462	All Organisms → cellular organisms → Bacteria → Acidobacteria	4889	Open in IMG/M
3300030854\|Ga0075385_10568365	Not Available	527	Open in IMG/M
3300031231\|Ga0170824_101943691	Not Available	640	Open in IMG/M
3300031708\|Ga0310686_107029919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	1418	Open in IMG/M
3300031754\|Ga0307475_10231251	Not Available	1480	Open in IMG/M
3300031820\|Ga0307473_10647721	Not Available	735	Open in IMG/M
3300031823\|Ga0307478_10113931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2110	Open in IMG/M
3300031962\|Ga0307479_10921264	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300032205\|Ga0307472_101006400	Not Available	781	Open in IMG/M
3300032515\|Ga0348332_13847362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.29%
Aquatic	Environmental → Aquatic	5.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.33%
Freshwater	Environmental → Aquatic → Freshwater	5.71%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.71%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	67.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	63.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101776301	3300001867	Forest Soil	TLRAIVVHFHTAHRTTNEEVLYLSPDWKKVFGILVESFSAEWTGYPGHSLRANSSRVHHPENSEFLGAIDTLGDKLIGHETLSFSDFP*
JGI25613J43889_100634042	3300002907	Grasslands Soil	MGTIIVYFHAPHGMTKDEVLNLRPGFKKVFGILVESLSAERTSYPGDRLRVNSSSRVYHPDNPELLGAXRTGGDKLIGHEALPFPDFR*
JGI25617J43924_100439172	3300002914	Grasslands Soil	MFTRQKQFIPRQVRVQKRYQDSTVATIGAIIVYFHAPHGPTKDEVLHLGPELKKVFGILVESVTAERTSYSGDARSANSSSRVHHPENPELLGAMSTRGDKSIGHEALSFPDFR*
JGI25616J43925_100461714	3300002917	Grasslands Soil	MGTIIVYFHAPHGMTKDEVLNLRPGFKKVFGILVESLSAERTSYPGERLRVNSSSRVYHPDNPELLGAMRTGGDKLIGHEALPFPDFR*
JGI25616J43925_101706381	3300002917	Grasslands Soil	MGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
JGI25616J43925_102101761	3300002917	Grasslands Soil	MTKDELLCLRPDFKKAFGILVESLSAERTSDPGHGLMVHSSGRVHHPENPKLLGAIAAAGNKLI
Ga0062385_100019943	3300004080	Bog Forest Soil	VQKRYQDSTVATIGAIIVYFHGPHGTPNDEVVYLRPDFKKVFGILVESLFAERTSYPGDRFAANTQSRVHHPDNPELLGAIGTLGDKLIGHEAVPFPDFR*
Ga0062384_1004765331	3300004082	Bog Forest Soil	MRAIVVHFHTLHGTTNEEVLYLRPDWKKVFGILVEFLSAERTGYPRNTLRANSSRVHHPENSEFLGAIDTLGDELIGHEALFPPNFR*
Ga0062388_1000827594	3300004635	Bog Forest Soil	MVSTIGAIIVYFHAPHGTPNDQVLYLRPDFKKVFGILVESLFAERTSYPGDRPMPNAPSRVHHPDQPELLGAIGTPGDKLIGHEAIPFPDFR*
Ga0062388_1001506962	3300004635	Bog Forest Soil	MGTIIIYFHVPHGTTNDEELYLRPDFTKVLGILVESRSAEWTSYLGDSLKANSSSRVHHPDNPELLGAIGTLGDKLIGHEALSFLRCR*
Ga0070707_1006215421	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIIVDFHAPHGTTKDEVLYLRLDWKKVFGILVESLSAERTSNSGDGLRANSSSPVPHPENPEFLGAIGTPADKLIGHEVLSFLGSR*
Ga0070698_1002350921	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	TPRQVCVQKRYQDSTVATIGAIIVHFHTPHGMTKDEVLNLRPGFKKVLGILVESLSAERTSYPGDRLRVNSSSRVHHPDNPELLGAIGARGDKLIGHEAVSLPDFR*
Ga0066701_101439482	3300005552	Soil	MFHRNRQLIPRQIRVQQRNQDSAIATIGTIIIYFHGPHGTTKDKALHLRPDFKKVFGILAEPLSAERTSYVGDGLKANSSSRVHHPENTELFGAIGTPGDKSIRHEALFSRLFL*
Ga0099791_100386331	3300007255	Vadose Zone Soil	TPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELFGAIGASGDKPIGHEALSSSDFR*
Ga0099791_102406401	3300007255	Vadose Zone Soil	TPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
Ga0099793_106208711	3300007258	Vadose Zone Soil	MFLRQFTPRQICVQKRYQDSTVATTGAIIVYFHAPHGTTNDEVLYLRSDLKKVFGILVESRSAERTSYPGDGLKANPSSRVHHPENPKLLGAIGTPGDKL
Ga0099794_104550491	3300007265	Vadose Zone Soil	KRHQDSTVAARRAIVVYFHAPHGMTKDELLCLRPDFKKAFGILVESLSAERTSDPGHGLRVHSSGRVHHPENPKLLGAIAAAGDKLIGHEAVSFPDFR*
Ga0099829_100073291	3300009038	Vadose Zone Soil	MGAIVVYFHAAHGTTNDEVLYLRPDWKKVLCILVESLSAERTSYLGDGLRAKSSSRVHHPENPEFLGAISTSGNELIGHEALPSPDFPWRWKSDGSSPKKRWLA*
Ga0099829_104556412	3300009038	Vadose Zone Soil	YFEKAFGILVESLSAERTSYPRDDLRASSSSRVHHPENPKLLAAMGTSADKLIGHEAVSFPDFR*
Ga0099829_107573831	3300009038	Vadose Zone Soil	QDSAVATTGAIIVYFHAPHGTTKDEILYLRADFKKVSGILVESVFAERTSNPGDGLRAKSSNRVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
Ga0099829_110638381	3300009038	Vadose Zone Soil	ICVQKRYQDSTVATIGAIIVYFHAPHGTTNDEVLYLSLDWKEVFGILVESLSAERTSYLGDGRRANSSSRVHRPENPELLGTIGTPGDKLIGHEALSFPDFR*
Ga0099829_116515031	3300009038	Vadose Zone Soil	MTKDELLCLRPDFKQVFGILVESLSAERTSYPGDGFRVNSSSRVHHPENPELLGAIGTPGDKLMG
Ga0099829_116909361	3300009038	Vadose Zone Soil	MGAIIVDFHAPQGATKDEALHLRPDFKKVFGLLVESLFAERASDPGDGLRVNASSRVHHPENPELLGAIGAGGEKLIGHEAVSL
Ga0099830_104588621	3300009088	Vadose Zone Soil	MVATIGAIIIYFHAPYGTTKDEVLRPDLKKVLGILVESLSAERTGYLGEGLRAGSSSRVHHPENPELLGAIGTRGDKSIGHGDSLPGLP*
Ga0099827_103513501	3300009090	Vadose Zone Soil	LQPDFKKVFSILVESLSAERTSYPGDGLRVSSSGRVHHPENPELLGAIGATGDKLIGHEAISFP
Ga0099792_102408292	3300009143	Vadose Zone Soil	LWTKAINTDSGLHMFLRQFTPRHICVQKRYQDSTVATTGAIIVYFHAPHGTTNDEVLYLSLDWKEVFGILVESLSAERTSYPGDGLRDLSSRVHCPDNPELLGAMSTPGDKLIGHEAVSFQDFR*
Ga0116218_15179111	3300009522	Peatlands Soil	MVVTMGAIIVYFHVPHGTTNDEVLYLRPDLMKVLGILVESRSAEWTSYPSDVLRASLSSRVHHPENPELLGAIDTLGDKLIGHEALSFPDFR*
Ga0136449_1004251474	3300010379	Peatlands Soil	MVVTMGAIIVYFHVPHGTTNDEVLYLRPDLTKVFGILVESRCAERTSYPSDVLRASLSSRVHHPENPELLGAIDTLGDKLIGHEALSFPDFR*
Ga0138573_12817621	3300011089	Peatlands Soil	MVVTMGAIIVYFHVPHGTTNDEVLYLRPDLMKVLGILVESRSAEWTSYPSDVLRASLSSRVHHPENPELLGAIGTLGDKLIGHEALSF
Ga0150983_108045301	3300011120	Forest Soil	MTKDEVLNLRPGFKKVLGILVESLSAERASDPGDGLRVNSSSRVHHPDNPELLLTIGARGDKLIGHEALPFPDFR*
Ga0150983_157784931	3300011120	Forest Soil	MQKGHQDSTLATIGAIIVYFHASHRTSNDEVLNLRPDWKKVSGMLVEALPAQRTGYPCDALRASASRIHHPDNTELLGAIGTLGDKLISHEALSSSDFC*
Ga0137392_101632165	3300011269	Vadose Zone Soil	LVESLSAERTSYLGDDLRASSLSRVHHPENPELLGALSTPGDKSIGHEALSLPDFR*
Ga0137392_106940001	3300011269	Vadose Zone Soil	MTKDELLCLRPDFKQVFGILVESLSAERTSYPGDGFRVNSSSRVHHPENPELLGAIGTPGDKLMGHEA
Ga0137391_103700921	3300011270	Vadose Zone Soil	MRAIIVYFHAPHGTTKDEVLTPDLKKVFGILVESLSAERTSYLGDGLRANSSSRVYHPENPELLGANGTSGDKSIGHEALSFPDFR*
Ga0137393_1000108622	3300011271	Vadose Zone Soil	MRAIIVYFHIPHGTTKDEALHLRPDLKKVFGILVESVSAERASYPGNGLSANSSSRVHHPENPELLGAIGTPGDKSIGHEALSFPDFR*
Ga0137393_103799271	3300011271	Vadose Zone Soil	MRAIIVYFHAPHGTTKDEVLTPDLKKVFGILVESLSAERTSYLGDGLRASSSSRVHHPENPELLGAIGTRGDKSIGHE
Ga0137393_117716901	3300011271	Vadose Zone Soil	KEVFGILVESLSAERTSYPGDGLRDLSSRVHCPDNPELLGAMSTPGDKLIGHEAVSFQDFR*
Ga0137389_100263861	3300012096	Vadose Zone Soil	MTKDELLCLRPDFKQVFGILVESLSAERTSYPGDGFRVNSSSRVHHPENPELLGAIGTPGDKLMGHEAVSFPDFR*
Ga0137389_106048701	3300012096	Vadose Zone Soil	LRLDFQKVFGIQVESLSAERTSYPGDRLRVSSSGRVHHPENPELLGAIGDKLIGHEAISFPDFR*
Ga0137388_102371311	3300012189	Vadose Zone Soil	VQKRYEDSSLAATGAIIVYFHGPHGATKDEALHLRLDFKKVFGILVEFLSAERTSYLGDDLRANSSSRVHHPENPELVGAIGTPGDKLIGHEAVSFPDFR*
Ga0137388_110503911	3300012189	Vadose Zone Soil	TIVTDSGLHIFLKQLTPRQIGVKKRYQDSTVATGGAIIVYFDAPHGTTKDEVLNLRPGFNEVFGILVESLSTDRTSYPGDTLRDLSSRVHCPDNPELLGAMSTPGDKLIGHEAVSFQDFR
Ga0137388_116051141	3300012189	Vadose Zone Soil	MGAIVVYFHAAHGTTNDEVLYLRPDWKKVLCILVESLSAERTSYLGDGLRAKSSSRVHHPENPEFLGAISTSGNELIGHEALPSLDFPWRWKSDGSSPKKRWLA*
Ga0137383_100476753	3300012199	Vadose Zone Soil	MGAIIVYFHAPHGATKDEALHLRPDFKKVFGILVESLSAERTSYPGDDLRANSSSRVHHPENPKLLGAIGTPGDELIGHEALSFSDIR*
Ga0137382_1000002031	3300012200	Vadose Zone Soil	VQKRYQDSPVATIEAIIVYFHAPHGTTNEEVLHLRPDFKKVFGIQVESLSAERTSYFGDGLKVNSSSRIHHPENPELLGAIGAPSDKLIGHEAFSFPDFRGR*
Ga0137382_100042486	3300012200	Vadose Zone Soil	MGAIIAYFHAPHGATKDEALHLRPDFKKVFGILVESLSAERTSYPGDDLRANSSSRVHHPENPKLLGAIGTPGDELICHEALSFSDFR*
Ga0137363_100135915	3300012202	Vadose Zone Soil	MGAIIVYFHAPHGATKDEALHLRLDFKKVFGILIESLFAERASYPGDGLGTNSSSRVHHPENPELLGAIGTPGDKLIGHEAVPFLDFR*
Ga0137363_101218562	3300012202	Vadose Zone Soil	MTKDEVLNLRPGFKKVLGILVESLSAERTSDPGDGLRVNSSSRVHHPDNPELLLAIGARGDKLIGHEAVSLPGFR*
Ga0137363_110371112	3300012202	Vadose Zone Soil	VQKRYQDSTLATIGAIIVYFHAPHGTTNDEVLYLRADWKKVLGILAESPSAERTSYPGDGLKAKSGQVHHPDNAKLFGANGTLGDKLIGHEALSFQTSADLEVERQPP
Ga0137363_110636351	3300012202	Vadose Zone Soil	VQKRYQDSTVATMGTIIVDFHTPHGPTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELLGAIGASGDKPIGHEALSSSDFR*
Ga0137363_117303201	3300012202	Vadose Zone Soil	ATMGAIIVYFHAPHGATKDEALHLRLDFKKFFGILVESLPAERTSYPGDGLRVNSSSRVHHPENPELLGAMSTHGDELIGHEAQPFRDFR*
Ga0137399_102310702	3300012203	Vadose Zone Soil	ERTSYPGDGLKANPSSRVHHPENPKLLGAIGTPGDELIGHEALSFSDFR*
Ga0137362_105555641	3300012205	Vadose Zone Soil	MGAIIVDFHTPHGTTKDEALYLRPDFKKVFGVLVESLSAERTSYPREGLSANSSSGVHHPENPELLGAIGASGDKPIGHEALSSSDFR*
Ga0137362_115384531	3300012205	Vadose Zone Soil	YQDSAVATIGAIIVYFHAPHGTTKGEVLYLRLDWKKVFGILVESLSAERTSYPGDGLRVNASSRVHHPENPELLGAIGTPGDKLIGHEALSFPNFR*
Ga0137362_117108472	3300012205	Vadose Zone Soil	PHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELFGAIGASGDKPIGHEALSSSDFR*
Ga0137381_100764601	3300012207	Vadose Zone Soil	MFAAMGTIIIYFHVPHGATNDEELYLRPDFKKVLGILVESRSAERTSYLGDSLMDSASRVHRPNNPELLGAIGTPSDKLIGHEALPFPDFR*
Ga0137379_100187601	3300012209	Vadose Zone Soil	LGAKAIITDGSLEIFLRQRQFSPRQICVQKQYQDSMFAAMGTIIIYFHVPHGATNDEELYLRPDFKKVLGILVESRSAERTSYLGDSLMDSASRVHRPNNPELLGAIGTPSDKLIGHEALPFPDFR*
Ga0137378_111698862	3300012210	Vadose Zone Soil	MQKRHQDATVATTGAIVIYFHASHRTTKEEVLYLRRDGKKVFGILVESLSAERTSYPGDGLRANSSSRVHRPDDPELLGAIGACGDKSIGH
Ga0137377_100223202	3300012211	Vadose Zone Soil	MGAIIAYFHAPHGATKDEALHLRPDFKKVFGILVESLSAERTSYPGDDLRANSSSRVHHPENPKLLGAIGTPGDELIGHEALSFSDIR*
Ga0137360_100225482	3300012361	Vadose Zone Soil	MGAIIVYFHAPHGATKDEALHLRLDFKKVFGILVESLFAERASYPGDGLGTNSSSRVHHPENPELLGAIGTPGDKLIGHEAVPFLDFR*
Ga0137361_101470291	3300012362	Vadose Zone Soil	TIVTDSGLHIFLKQLTPRQIGVKKRYQDSTVATGGAIIVYFDAPHGTTKDEVLNLRPGFNEVFGILVESLSADRTSYPGDTLRDLSSRVHCPDNPELLGAMSTPSDKLIGHEAVPLQDFR
Ga0137361_104434203	3300012362	Vadose Zone Soil	VQKRYQDSAVATIGAIIVYFHAPHGTTKGEVLYLRLDWKKVFGILVESLSAERTSYPGDGLRVNASSRVHHPENPELLGAIGTPGDKLIGHEALSFPNFR*
Ga0137361_108996261	3300012362	Vadose Zone Soil	TIEAIIIYFHAPHGTPNNEVLHLRPDFKKVFGILVESLSAERTSYFGDGLRVNSSSRIHHPENPELLGAIGAPSDKLIGHEAFSFPDFRGR*
Ga0137361_116464621	3300012362	Vadose Zone Soil	IITDGALLMFLRQFTPRQICVQKRYQDSTVATMGTIIVDFHTPHGPTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELLGAIGASGDKPIGHEALSSSDFR
Ga0137390_103293941	3300012363	Vadose Zone Soil	MRAIIVYFHAPHGTTKDEVLTPDLKKVFGILVESLSAERTSYLGDGLRANSSSRVYHPENPELLGAIGTRGDKSIGHEALSFPDFR*
Ga0137390_110810141	3300012363	Vadose Zone Soil	RYQDSTVATGGAIIVYFHAPHGTTKDEVLNLRPGFSEVFGILVESLSTDRTSYPGDTLRDLSSRVHCPDNPELLGAMSTPGDKLIGQEAVFFQDFR*
Ga0137398_106738792	3300012683	Vadose Zone Soil	AIIIYFHAPHGTTKDEVLTPDLKKVFGILVESVSAERASYPGNGLSANSSSRVHHPENPELLGAIGTPGDKSIGHEALSFPDFR*
Ga0137397_100315072	3300012685	Vadose Zone Soil	MGAIIVYFHAPHGATKDEALHLRLDFKKFFGILVESLPAERTSYPGDGLRVNSSSRVHHPENPELLGAMSTHSDELIGHEAQPFLDFR*
Ga0137395_101020342	3300012917	Vadose Zone Soil	MRAIIVYFHVPHGTTKDEALHLRPDLKKVFGILVESVSAERASYPGNGLSANSSSRVHHPENPELLGAIGTPGDKSIGHEALSFPDFR*
Ga0137395_103967981	3300012917	Vadose Zone Soil	TPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVDHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
Ga0137394_104310541	3300012922	Vadose Zone Soil	MTKDEVLTPGLKKVFGILVESVSAERASYPGNGLSANSSSRVHHPENPELLGAIGTSGDKSIG
Ga0137359_101696271	3300012923	Vadose Zone Soil	SPLWTKAIFTDSGLYMFRRQIQFIPRQICVQKRYQDSPVATIEAIIVYFHAPHGTTNEEVLHLRPDFKKVFGILVESLSAERTSYFGDGLRVNSSSRIHHPENPELLGAIGAPSDKLIGHEAFSFPDFRGR*
Ga0137359_110567012	3300012923	Vadose Zone Soil	MEKRYQDSTVATVGAIIIYFHAPHGTTKDEVLRPDLKKVLGILVESLSAERTSYLGEGLRASSSSRVHHPKNPELLGTIGTRGDKSIGHEDSLPGLP*
Ga0137413_112249741	3300012924	Vadose Zone Soil	MFLRQFTPRHICVQKRYQDSTVATTGAIIVYFHAPHGTTKDEALHPRPDFKKVFGILVESRSTERTSYPGDGLKANSSSRVHHPENPELLGAIGTPGDKLIGHDALSS
Ga0137419_107223362	3300012925	Vadose Zone Soil	PHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
Ga0137412_101054252	3300015242	Vadose Zone Soil	MGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELFGAIGASGDKPIGHEALSSSDFR*
Ga0137403_103360013	3300015264	Vadose Zone Soil	EALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR*
Ga0187801_104652671	3300017933	Freshwater Sediment	TGNGLNIFSRQFIPRQFCVQKRCQDSRVATTGAVILDFYTPHGTTKYEVLCVRLDWNKVFGILVESLSAERTGYPGDVLRATANQVHHPENSELLAAIGTAGDKLIGHEALNFLDFR
Ga0179592_103712602	3300020199	Vadose Zone Soil	MQKRYQDSTVATTGAIIIYFYAPHWTTKDEVLRPDLKKVSGILVESLSAERTSYLGDGLRASSSSRVHHPQNPELLGAIGTRGDKSIG
Ga0179596_100477681	3300021086	Vadose Zone Soil	MGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR
Ga0210392_107443501	3300021475	Soil	MQKGHQDSTLATIGAIIVYFHASHRTTNDEVLNLRPDWKKVSGMLVEALPAQRTGYPCDALRASASRIHHPDNTELLGAMGALGDKLISHEALSSSDFC
Ga0209647_11950051	3300026319	Grasslands Soil	MGTIIVYFHAPHGMTKDEVLNLRPGFKKVFGILVESLSAERTSYPGERLRVNSSSRVYHPDNPELLGAMRTGGDKLIGHEALPFPDFR
Ga0209131_10229786	3300026320	Grasslands Soil	MGTIIVYFHAPHGMTKDEVLNLRPGFKKVFGILVESLSAERTSYPGDRLRVNSSSRVYHPDNPELLGAMRTGGDKLIGHEALPFPDFR
Ga0257154_10235941	3300026467	Soil	MRAIIVHLHTPHGTTNEEALYLKPDWKKVFGILIESLSTEWTGYPGNGLGANSSRVHHPENSELLGAIDTPGDKLIGHEALFPPNFR
Ga0257159_10398332	3300026494	Soil	MVSTIGAVIVYFHAPHGTPNDEVLYLRPDFKKVFGILVESLFAERTSYPGDRPTPNAPSQVHHPDQPEWLGAIGTPGDKLIGHEAIPFPDFR
Ga0257159_10564161	3300026494	Soil	MGAIIVYFHAPHGATKDEALHLRLDFKKVFGILVESLFAERTSYPGDGLGTNSSSRVHHPENPELLGAIGTPGDKLIGHEAVPFLDFR
Ga0257158_10935372	3300026515	Soil	VQKRYQDSTVATTGAIIVYFHAPHGTTKDEILYLRADFKKVSGILVESVFAERTSNPGDGLRTKSSNRVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR
Ga0209648_101201243	3300026551	Grasslands Soil	MFTRQKQFIPRQVRVQKRYQDSTVATIGAIIVYFHAPHGPTKDEVLHLGPELKKVFGILVESVTAERTSYSGDARSANSSSRVHHPENPELLGAMSTRGDKSIGHEALSFPDFR
Ga0209648_106048761	3300026551	Grasslands Soil	LWTKAIVADCGLHMFLGQFTPRQISVQKRYQDSTVATMGAIIVYFHAPHGATKDEALHLRLDFKKVFGILVESLFAERTSYPGDGLGTNSSSRVHRPENPELLGAIGTPGDKLIGHEAVPFLDFR
Ga0179587_106572741	3300026557	Vadose Zone Soil	MGAIIAYFHAPHGATKDEALHLRPDFKKVFGILVESLSAERTSYPGDDLRASSSSKVHHPENPKLLGAIGTPGDELICHEALSFSDFR
Ga0209076_10025508	3300027643	Vadose Zone Soil	MGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLSANSSSGVHHPENPELFGAIGASGDKPIGHEALSSSDFR
Ga0209388_10381122	3300027655	Vadose Zone Soil	MFLRQFTPRQICVQKRYQDSTVATMGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR
Ga0209588_10346081	3300027671	Vadose Zone Soil	MGAIIVDFHTPHGTTKGEALYLRPDFKKVFGILVESLSAERTSYPREGLTADSSSGVHHPENPELLGAIGAPGDK
Ga0209773_103030831	3300027829	Bog Forest Soil	QRYQDSTFETMGTIIIYFHVPHGTTNDEELYLRPDFTKVLGILVESRSAEWTSYLGDSLKANSSSRVHHPDNPELLGAIGTLGDKLIGHEALSFLRCR
Ga0209180_102806701	3300027846	Vadose Zone Soil	QDSAVATTGAIIVYFHAPHGTTKDEILYLRADFKKVSGILVESVFAERTSNPGDGLRAKSSNRVHHPENPELLGAIGAPGDKLIGHEAVSFPDFR
Ga0209180_103569031	3300027846	Vadose Zone Soil	MFVRQLTLRQICVQERYQDSAVATIGAIIVYFHAPHGMTKDELLCLRPDFKQVFGILVESLSAERTSYPGDGFRVNSSSRVHHPENPELLGAIGTPGDKLMGHEAVSFPDFR
Ga0209283_100134624	3300027875	Vadose Zone Soil	MGAIVVYFHAAHGTTNDEVLYLRPDWKKVLCILVESLSAERTSYLGDGLRAKSSSRVHHPENPEFLGAISTSGNELIGHEALPSPDFPWRWKSDGSSPKKRWLA
Ga0075385_105683651	3300030854	Soil	MQKGHQDSTLATIGAIIVNFHAPHGATNDEVLNLRPDWKKVSGMLVEALPAQRTGYPCEALRASASRIHHPDNTELLGAMGTLGDKLISHEALSFSDFC
Ga0170824_1019436911	3300031231	Forest Soil	QKVFGILVESLSAERTSDPGHSLRVNSSSRVHYPDNSELLLAIGARGDKLIGHEAVSLPDFR
Ga0310686_1070299191	3300031708	Soil	KRYQDSTIGTTGAIIVYFHAPHGTTKDEVLYLRPDLKKVFGILVESLSAERTSYPGDGLRANSSSRVHHPENPELLGAMSTRGDKLIGHEALSFPDFP
Ga0307475_102312511	3300031754	Hardwood Forest Soil	MTKDEVRNLRPGFKKVFGILVESLSAERASDPGDGLRVNSSGRVHHPDNPELLLAIGARGDKLIGHEGVSFADFR
Ga0307473_106477212	3300031820	Hardwood Forest Soil	STPATVRAIVVHFHAPHGTTNDEVLYLRPDRNKVFGVLVESLSAVRTSYSGDDLRANLSSPIPHPDNPEFLGAIGTPANKLIGHEALPFPDFR
Ga0307478_101139313	3300031823	Hardwood Forest Soil	VQKRYRDCLIAALRAIVVHFYTAYGTTNEEVLYLRPDWKKVFGILVESLSAKWTGYPGNSLRANSSRVHHPENSEFLGAIDTLGDKLIGHETLSFSDFP
Ga0307479_109212641	3300031962	Hardwood Forest Soil	MFLRQLTPWQICEEKRYQHSSVATARAIVVHFHAPHRTTKGEVLCLSPDLKVFGILIESLSAERTDYPGDGLSAPASSRVHHPENPKLLAAMETAT
Ga0307472_1010064001	3300032205	Hardwood Forest Soil	EVLYLRPDRNKVFGVLVESLSAERTSYSSDDLRANLSSPIPHPDNPEFLGAIGTPANKLIGHEALPFPDFR
Ga0348332_138473621	3300032515	Plant Litter	MFLRQFIPRQVCVQKRYQDSTVATIGAIIVYFHAPHGTTNDEVLYLRPDFEKVFGILVESLFAEWTSYPGDGLGTNSSSRVHHPENPEFLGAIGTPGDKLIGHEAVPFRDFR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094986

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences