Metagenome / Metatranscriptome Family F094983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094983
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	64 residues
Representative Sequence	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGLRES
Number of Associated Samples	68
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.00 %
% of genes near scaffold ends (potentially truncated)	81.90 %
% of genes from short scaffolds (< 2000 bps)	79.05 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (66.667 % of family members)
Environment Ontology (ENVO)	Unclassified (58.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.23% β-sheet: 31.82% Coil/Unstructured: 57.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07238	PilZ	29.52
PF13030	DUF3891	2.86
PF01103	Omp85	1.90
PF03743	TrbI	1.90
PF01555	N6_N4_Mtase	1.90
PF01734	Patatin	1.90
PF13031	DUF3892	1.90
PF00375	SDF	0.95
PF00578	AhpC-TSA	0.95
PF03793	PASTA	0.95
PF11799	IMS_C	0.95
PF01087	GalP_UDP_transf	0.95
PF04014	MazE_antitoxin	0.95
PF14437	MafB19-deam	0.95
PF11752	DUF3309	0.95
PF01381	HTH_3	0.95
PF12844	HTH_19	0.95
PF09107	SelB-wing_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.90
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.90
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.90
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.90
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	1.90
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.90
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.05 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	27.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.90 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.90 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.90 %
Unclassified	root	N/A	1.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10027269	All Organisms → cellular organisms → Bacteria → Acidobacteria	2025	Open in IMG/M
3300002560\|JGI25383J37093_10156120	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300002908\|JGI25382J43887_10333081	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300002910\|JGI25615J43890_1100674	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300005167\|Ga0066672_10047471	All Organisms → cellular organisms → Bacteria → Acidobacteria	2446	Open in IMG/M
3300005175\|Ga0066673_10814735	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005180\|Ga0066685_10015587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4423	Open in IMG/M
3300005181\|Ga0066678_10919613	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005445\|Ga0070708_100536639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300005468\|Ga0070707_100277468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1629	Open in IMG/M
3300005518\|Ga0070699_101417620	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300005555\|Ga0066692_10497966	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300006031\|Ga0066651_10096375	All Organisms → cellular organisms → Bacteria → Acidobacteria	1483	Open in IMG/M
3300007255\|Ga0099791_10372865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300007255\|Ga0099791_10390038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300007258\|Ga0099793_10176043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1020	Open in IMG/M
3300007258\|Ga0099793_10443590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300007258\|Ga0099793_10660961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300007265\|Ga0099794_10179488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300007265\|Ga0099794_10276595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300009012\|Ga0066710_100079464	All Organisms → cellular organisms → Bacteria	4266	Open in IMG/M
3300009038\|Ga0099829_11027685	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009088\|Ga0099830_10073949	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300009088\|Ga0099830_10611457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300009088\|Ga0099830_10648115	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300009089\|Ga0099828_11256279	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300009137\|Ga0066709_100097989	All Organisms → cellular organisms → Bacteria → Acidobacteria	3579	Open in IMG/M
3300010071\|Ga0127477_160460	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300011269\|Ga0137392_10215631	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300011270\|Ga0137391_10161745	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300011270\|Ga0137391_10467085	All Organisms → cellular organisms → Bacteria → Acidobacteria	1072	Open in IMG/M
3300011271\|Ga0137393_10224091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1591	Open in IMG/M
3300012203\|Ga0137399_10229824	All Organisms → cellular organisms → Bacteria → Acidobacteria	1516	Open in IMG/M
3300012203\|Ga0137399_10629049	All Organisms → cellular organisms → Bacteria → Acidobacteria	903	Open in IMG/M
3300012205\|Ga0137362_10227903	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300012205\|Ga0137362_10703056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300012205\|Ga0137362_10775473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300012205\|Ga0137362_10930318	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300012205\|Ga0137362_11209942	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300012211\|Ga0137377_10332483	All Organisms → cellular organisms → Bacteria → Acidobacteria	1455	Open in IMG/M
3300012211\|Ga0137377_10862001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300012351\|Ga0137386_10370405	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300012361\|Ga0137360_10113475	All Organisms → cellular organisms → Bacteria → Acidobacteria	2095	Open in IMG/M
3300012361\|Ga0137360_10505373	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300012361\|Ga0137360_11517068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012362\|Ga0137361_10025289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4605	Open in IMG/M
3300012362\|Ga0137361_11567389	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300012393\|Ga0134052_1209957	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300012582\|Ga0137358_10015953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4769	Open in IMG/M
3300012582\|Ga0137358_10294241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300012582\|Ga0137358_10705548	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300012683\|Ga0137398_10515252	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300012922\|Ga0137394_10196624	All Organisms → cellular organisms → Bacteria → Acidobacteria	1721	Open in IMG/M
3300012922\|Ga0137394_10209482	All Organisms → cellular organisms → Bacteria → Acidobacteria	1666	Open in IMG/M
3300012922\|Ga0137394_11434182	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300012923\|Ga0137359_10003834	All Organisms → cellular organisms → Bacteria	12248	Open in IMG/M
3300012923\|Ga0137359_10209841	All Organisms → cellular organisms → Bacteria → Acidobacteria	1740	Open in IMG/M
3300012923\|Ga0137359_10900369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300012923\|Ga0137359_10934685	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012925\|Ga0137419_10026198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3502	Open in IMG/M
3300012925\|Ga0137419_11947246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012927\|Ga0137416_10602247	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300012929\|Ga0137404_10620615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300012929\|Ga0137404_10680939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300012929\|Ga0137404_11041670	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300012929\|Ga0137404_11581324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300012930\|Ga0137407_11426164	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300012944\|Ga0137410_11171657	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012944\|Ga0137410_11233882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300015054\|Ga0137420_1222010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1747	Open in IMG/M
3300015241\|Ga0137418_10551726	Not Available	912	Open in IMG/M
3300015241\|Ga0137418_10911515	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300020170\|Ga0179594_10232670	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300020199\|Ga0179592_10465052	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300021170\|Ga0210400_10991244	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300021180\|Ga0210396_10000763	All Organisms → cellular organisms → Bacteria	38200	Open in IMG/M
3300021478\|Ga0210402_11818677	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300024330\|Ga0137417_1365988	All Organisms → cellular organisms → Bacteria → Acidobacteria	4299	Open in IMG/M
3300025922\|Ga0207646_10235415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300026328\|Ga0209802_1127180	All Organisms → cellular organisms → Bacteria → Acidobacteria	1110	Open in IMG/M
3300026333\|Ga0209158_1061039	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M
3300026524\|Ga0209690_1019787	All Organisms → cellular organisms → Bacteria → Acidobacteria	3416	Open in IMG/M
3300026532\|Ga0209160_1047387	All Organisms → cellular organisms → Bacteria → Acidobacteria	2521	Open in IMG/M
3300026555\|Ga0179593_1018897	All Organisms → cellular organisms → Bacteria → Acidobacteria	2246	Open in IMG/M
3300026557\|Ga0179587_10783556	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300027643\|Ga0209076_1008234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2603	Open in IMG/M
3300027643\|Ga0209076_1161655	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300027846\|Ga0209180_10467019	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300027846\|Ga0209180_10553053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300027846\|Ga0209180_10602799	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300027846\|Ga0209180_10726469	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300027862\|Ga0209701_10617371	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300027903\|Ga0209488_11099414	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300028536\|Ga0137415_10823355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300029636\|Ga0222749_10727702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300031740\|Ga0307468_100702684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300031754\|Ga0307475_10009402	All Organisms → cellular organisms → Bacteria	6441	Open in IMG/M
3300031754\|Ga0307475_10272224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358	Open in IMG/M
3300031754\|Ga0307475_10725235	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300031810\|Ga0316044_127332	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031820\|Ga0307473_10029813	All Organisms → cellular organisms → Bacteria → Acidobacteria	2361	Open in IMG/M
3300031962\|Ga0307479_10019041	All Organisms → cellular organisms → Bacteria	6474	Open in IMG/M
3300031962\|Ga0307479_10182097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2066	Open in IMG/M
3300032180\|Ga0307471_102753612	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.24%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	69.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.95%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	66.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010071	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031810	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100272691	3300002558	Grasslands Soil	NVSRFGVQVVTQEFWKPAERVLVSSPPGFCAQGSVVYCKKLPSDDYSVGIRLDAAVEHWMEGSDSESPDEP*
JGI25383J37093_101561202	3300002560	Grasslands Soil	LVSSPLGFCVQGSVVYCMKLPSNDYLLGIWLDAPVEHWTKALRFGES*
JGI25382J43887_103330811	3300002908	Grasslands Soil	EPAEKVLVSSPPGFCLQGSVVYCRKLPSDDYLLGIRLNAPVEDWIEALGLMAS*
JGI25615J43890_11006741	3300002910	Grasslands Soil	KMVTQKLWESAELVLVSSPPGFLVQGSVVYCKKLPSDDYIVGIRLDAPVKHWIEALGLGEA*
Ga0066672_100474713	3300005167	Soil	MKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0066673_108147351	3300005175	Soil	WEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0066685_100155871	3300005180	Soil	VVPTENVSRFGIQMVTQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0066678_109196132	3300005181	Soil	KFWEPDEMVLVSSPPGFFVQGSVVYCKKLPSDNHLLGIRLDAPVDHWSETLGPAAS*
Ga0070708_1005366391	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	NVSRFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVAYCNKLPSDDYILGIRLDAPVEHWIEALGFRGS*
Ga0070707_1002774683	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ENISRAGIQMLTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEPWSETLAPAAS*
Ga0070699_1014176201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVAYCNKLPSDDYILGIRLDAPVEHWIEALGFRGS*
Ga0066692_104979663	3300005555	Soil	VPTENISRTGIRLVTREFWEPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLLLDAPVEDWTEACGGFRGSWRALT*
Ga0066651_100963754	3300006031	Soil	TQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0099791_103728651	3300007255	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEKWM
Ga0099791_103900382	3300007255	Vadose Zone Soil	PTENISRVGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCKKLPSDDHLLGIRFDAPIEHWSETLGPGVS*
Ga0099793_101760431	3300007258	Vadose Zone Soil	PADLVLVSSPPGFCVQGSVVYCKNLPSEDYILGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0099793_104435901	3300007258	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGE
Ga0099793_106609611	3300007258	Vadose Zone Soil	MVTQKFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGSRES
Ga0099794_101794881	3300007265	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLG
Ga0099794_102765951	3300007265	Vadose Zone Soil	MVTQEFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLG
Ga0066710_1000794645	3300009012	Grasslands Soil	EVVPVENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0099829_110276851	3300009038	Vadose Zone Soil	MQMVTQTFWEPAERVLVSSPPGFWLEGSVVYCKKLPSEDYLLGIWLDAPVEHWTEALGCEES*
Ga0099830_100739494	3300009088	Vadose Zone Soil	MQMVTQTFREPAERVLVSSPPGFWLEGSVVYCKKLPSEDYLLGIWLDAPVEHWTEALGCEES*
Ga0099830_106114572	3300009088	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0099830_106481152	3300009088	Vadose Zone Soil	VPTKNVSRFGIQMVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA*
Ga0099828_112562791	3300009089	Vadose Zone Soil	PDELVLVSSPPGFCVQGSVVYCKKLPSDDHVLGIRLDAPVEHWNETLGFGES*
Ga0066709_1000979892	3300009137	Grasslands Soil	VENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES*
Ga0127477_1604602	3300010071	Grasslands Soil	GIQMVTQKFWEPTELVLVSSPPEFCAQGSVVYCKKLPSDDYIVGIRLEAPVEHWNEALGLGSPDKP*
Ga0137392_102156311	3300011269	Vadose Zone Soil	MIAQRFWEPSELVLVSSPPGFFVQGSIVYCKKLPSDDHVLGIRLDTAVENWMETLGFQDS
Ga0137391_101617451	3300011270	Vadose Zone Soil	MVTQKSWEPAELVLVSFPPGFYLQGLVIYCKKLPSEDYLLGIRLHAPVEDWSETLGLRVSW*
Ga0137391_104670854	3300011270	Vadose Zone Soil	GIRLVTREFWEPAEPVLVSSPPGFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEAMRDSGA*
Ga0137393_102240911	3300011271	Vadose Zone Soil	NVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0137399_102298242	3300012203	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYVLGISLDAPVEDWTETLGFGES*
Ga0137399_106290491	3300012203	Vadose Zone Soil	KNVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCNKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRP*
Ga0137362_102279031	3300012205	Vadose Zone Soil	KFWEPAELVLVSSPPGFCVQGSVVYCKKLPSEDHILGIRLGTPVEHWIEALGLGES*
Ga0137362_107030561	3300012205	Vadose Zone Soil	MVAQEFWEPADTVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137362_107754731	3300012205	Vadose Zone Soil	MVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGL
Ga0137362_109303181	3300012205	Vadose Zone Soil	LVTREFWEPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWIEKLGLRCPDES*
Ga0137362_112099421	3300012205	Vadose Zone Soil	QEFWKPDEQVLVSSPPGFCVQGSVVYCNKLPSDDYVVGLSFNGPVEDWTETLACGES*
Ga0137377_103324834	3300012211	Vadose Zone Soil	EVVPTKNVSRFGIQIVAQEFWEPADLVLVSSPPGFCVQGSVVYCNKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRP*
Ga0137377_108620013	3300012211	Vadose Zone Soil	EVVPTKNVSRFGIQIVAQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGSPFRPEPKAGG*
Ga0137386_103704051	3300012351	Vadose Zone Soil	IVSTENVSSLGIQTIAQKFWEPSEFVLVSSPPGFFVQGSIVYCKKLPSDDHVLGIRFDSAVEHWTEILGLRD*
Ga0137360_101134751	3300012361	Vadose Zone Soil	IQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCRKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137360_105053731	3300012361	Vadose Zone Soil	WEPAELVLVSCPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEELGLAESCGTLT*
Ga0137360_115170682	3300012361	Vadose Zone Soil	QMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA*
Ga0137361_100252891	3300012362	Vadose Zone Soil	MVTREFWKPAELVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWTEACGIRGA
Ga0137361_108842171	3300012362	Vadose Zone Soil	SPPGFCVQGSVVYCKKLPSDDYMLGIRLDASVEHWIEALGFGASG*
Ga0137361_115673891	3300012362	Vadose Zone Soil	SRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0134052_12099571	3300012393	Grasslands Soil	SRFGIQMVTQEFWEPAELVLVSSPPGFCVQGSVVYCKKLPSDDYILGIRLDASVEHWMEALRLGEA*
Ga0137358_100159531	3300012582	Vadose Zone Soil	NISRTGIRLVTREFWEPAEPVLVSSPPEFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEACGIRGA*
Ga0137358_102942411	3300012582	Vadose Zone Soil	MVSQKFWEPDELVLVSSPPRFFVQGSVVYCKKLPSDDHLLGVRFDASVEHWIETLGLREARVPQPSV*
Ga0137358_107055481	3300012582	Vadose Zone Soil	AGIQMLTQKFWEPDEMVLVSSPPGFFVRGSVVYCKKLPSDNHLLGIRLDAPVDHWSETLGPAAS*
Ga0137398_105152522	3300012683	Vadose Zone Soil	MVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKRPSEDYVLGIRLDAPVEEWMEQLGLGESCQTLA*
Ga0137394_101966241	3300012922	Vadose Zone Soil	KNVSRLGIQMVTQEFWKPADLVLVSSPPGFCVQGSVVYCMKLPSEDYILGIRLDAPLGEWMEQLGLGSPFRPEPKAGG*
Ga0137394_102094824	3300012922	Vadose Zone Soil	LVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESSQTLA*
Ga0137394_114341821	3300012922	Vadose Zone Soil	NISGAGMQMVTQGFWKPDELVLVSSPPGFCVQGSVVYCKKLPSDDHVLGIRLDAPVEHWNETLGFGES*
Ga0137359_100038347	3300012923	Vadose Zone Soil	MVTQKLWESAELVLVSSPPGFLVQGSVVYCKKLPSDDYIVGIRLDAPVKHWIEALGLGEA
Ga0137359_102098415	3300012923	Vadose Zone Soil	EPAEPVLVSSPPGFCVQGSVVYCRKLPSDDYVLGLSLDAPVEDWIEKLGLRCPDES*
Ga0137359_109003691	3300012923	Vadose Zone Soil	PTENVSRAGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWIETLGPGVS*
Ga0137359_109346852	3300012923	Vadose Zone Soil	EIVPTENISKAGIQMVSQKFWEPDELVLVSSPPRFFVQGSVVYCKKLPSDDHLLGVRFDASVEHWIETLGLREARVPQPSV*
Ga0137419_100261986	3300012925	Vadose Zone Soil	MVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDYIVGIRLDAPVEHWTEALGLRES
Ga0137419_119472461	3300012925	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEEWM
Ga0137416_106022471	3300012927	Vadose Zone Soil	KNVSRFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESFQTLA*
Ga0137404_106206152	3300012929	Vadose Zone Soil	KPAVFEIVPTENISRVGIQMVTQKFWEPDETVLVSSPPGFFVHGSVVYCKKLPSDDHLLGIRFDASVEHWIDALRPSAS*
Ga0137404_106809392	3300012929	Vadose Zone Soil	MVAQEFWEPADLVLVSSPPGFCIQGSVVYCKKLPSEDYILGIRLDAPVEKWMEQLGLGESFQT
Ga0137404_110416701	3300012929	Vadose Zone Soil	MVTQEFWKPDEQVLVSSPPGFCVQGSVVYCKKLPSNDYVLGISLDAPVEDWTETLGFGES
Ga0137404_115813241	3300012929	Vadose Zone Soil	KPAVFEIVPTENISRVGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDTPIEHWSETLGPSVS*
Ga0137407_114261641	3300012930	Vadose Zone Soil	QEFWEPADLVLVSSPPGICVRGSVVYCRKLPSEDYILGIRLDAPVKHWIETPGLAEF*
Ga0137410_111716571	3300012944	Vadose Zone Soil	MLTQRFWDPAEMVLVSSPPGFCLQGSVVYCNKLPSDDYVLGIRLNAPVEHWMDTLGLGES
Ga0137410_112338821	3300012944	Vadose Zone Soil	GIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWIETLGPGVS*
Ga0137420_12220103	3300015054	Vadose Zone Soil	MKMVTQEFWKPDELVLVSSPPGFCAQGSVVYCKKLPSDDYVLGISLDAPVE
Ga0137418_105517263	3300015241	Vadose Zone Soil	PTENVSRFGIQMVTQEFWEAAELVLVSSPPGFCVQGSVVYCKKLPSDDYMLGIRLDASVEHWIEALGFGASC*
Ga0137418_109115151	3300015241	Vadose Zone Soil	MVSQKFWEPDELVLVSSPPGFFVQGAVVYCKKLPSDDHLLGIRFDASVEHWIETLGLRESRLPPPV*
Ga0179594_102326703	3300020170	Vadose Zone Soil	NISRSGMQMVTQEFWKPDEQVLVSSPPGFCVQGSVVYCKKLPSDDYFLGISLDAPVENWTDTLGLGD
Ga0179592_104650522	3300020199	Vadose Zone Soil	RFGIQMVTQEFWEPADLVLVSSPPGFCVQGSVVYCKKLPSDDHIVGIRLDAPVEHWIEALGLRES
Ga0210400_109912441	3300021170	Soil	EPAELVLVSSPPGFCVQGSAVYCKKLPSEDYILGIRLDAPVEHWRIEALGFGES
Ga0210396_1000076322	3300021180	Soil	MKIVTREFWEPEEPVLLSSPPGFCIHGSVVYCKKLPSDNYFVGISLDAPLEDWTETLGLVES
Ga0210402_118186771	3300021478	Soil	MQMVTQELWKPDEQVLVSSPPGFCVQGSVVYCKKLPSDNYFLGISLDAPLELGLVDWDSGND
Ga0137417_13659885	3300024330	Vadose Zone Soil	MVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA
Ga0207646_102354153	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TENISRAGIQMLTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEPWSETLAPAAS
Ga0209802_11271801	3300026328	Soil	LEVVPTENISRNGIQMVTREFWKPAELVLVSSPPGFCVQGSVVYCKKFPSDDYILGIRLDAPVEHGIEALGFRGS
Ga0209158_10610393	3300026333	Soil	NVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0209690_10197873	3300026524	Soil	VENVSRSGMKIVTQEFWEPAEMVLLSSPPGFCVQGSVVYCKKLPSDDFVLGISLDVPIENWAETLAFGES
Ga0209160_10473874	3300026532	Soil	TREFWKPAELVLVSSPPGFCVQGSVVYCKKFPSDDYILGIRLDAPVEHGIEALGFRGS
Ga0179593_10188974	3300026555	Vadose Zone Soil	STKNVSRFGIQMVTQEFWEPTDLVLVSSPPGFCVQGSVVYCKKLPSEDYILGIRLDAPVEEWMEQLGLGESCQTLA
Ga0179587_107835561	3300026557	Vadose Zone Soil	ENISRTGIRLVTREFWEPAEPVLVSSPPEFCVHGSVVYCKKLPSDDYVLGLSLDAPVEHWTEACGDSGA
Ga0209076_10082342	3300027643	Vadose Zone Soil	MVCRRFWERAEMVLVSSPPGFYVQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGES
Ga0209076_11616551	3300027643	Vadose Zone Soil	PTENISRTGIRLVTREFWEPAEPVLVSSPPEFCVQGSVVYCKKLPSDDYVLGLSLDAPVEDWTEAMRDSGA
Ga0209180_104670191	3300027846	Vadose Zone Soil	VTRKSWEPAELVLVSFPPGFYLQGLVIYCKKLPSEDYLLGIRLHAPVEDWSETLGLRVSW
Ga0209180_105530531	3300027846	Vadose Zone Soil	VGIQMVTQKFWGPDELVLVSSPPGFFVQGSVVYCRKLPSDDYLLGIRLDAPVEHWSETFGLGEPRVPQPSV
Ga0209180_106027992	3300027846	Vadose Zone Soil	AGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA
Ga0209180_107264691	3300027846	Vadose Zone Soil	WDRAEMVLVSSPPGFCVQGSVVYCKKLPSDDYVLGIRLDAPVEHWIEALGLVES
Ga0209701_106173711	3300027862	Vadose Zone Soil	VPTKNVSRFGIQMVTQEFWEPAGLVLVSSPPGFCVQGSVVYCKKLPSEDYIVGIRLDAPVEEWMEQRGLGESCQTLA
Ga0209488_110994141	3300027903	Vadose Zone Soil	VSRFGIQMVSRRFWERAEMVLVSSPPGFYVQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGES
Ga0137415_108233551	3300028536	Vadose Zone Soil	PAELVLVSCPPGFCVQGSVVYCKKLPSEDYMLGIRLDAPVEEWIEELGLAESCGTLT
Ga0222749_107277022	3300029636	Soil	KNVSRQGIKMVAQKLWEPAELVLVSSPPGFLVQGSVVYCKKLPSDDYILGIRLDAPVKHWIEALGLGEA
Ga0307468_1007026842	3300031740	Hardwood Forest Soil	ISRAGIQMVTQKFWEPDELVLVSSPPGFFVQGSVVYCRKLPSDDHLLGIRLDAPVEHWSETLGPGES
Ga0307475_100094021	3300031754	Hardwood Forest Soil	RSGMQMLTRELWKPDELVLVSSPPGFCVQGSVIYCKKLPSDDYFVGISLDAPVEDWTETLGFGEP
Ga0307475_102722241	3300031754	Hardwood Forest Soil	MVLVSSPPGFYAQGSVVYCKKLPSEDYILGIRLDAPVEHWIEVLGLGESSEP
Ga0307475_107252352	3300031754	Hardwood Forest Soil	GMQIVTQEFWEPGELVLVSSPPGFCVQGSVAYCKKLPSDDYVLGIRLNAPVDDWIKAIGVEESRRI
Ga0316044_1273321	3300031810	Soil	AETVLVSSPLGLCVQGSVVYCNKLPSDDHIVGIRLDAPIERWMEALEFRES
Ga0307473_100298131	3300031820	Hardwood Forest Soil	QELWEPAEVVLVSCPPGFCVQGSVVYCKKLPSDDYVLGISLEAPVADWTEVLGFEES
Ga0307479_100190418	3300031962	Hardwood Forest Soil	PGVFEVVPTENVSRLGIRLVTQNCWEPAETVLVSSPPGLCVQGSVVYCKKLPSDDHILGIRLDAPVEQWSETLGLVDS
Ga0307479_101820972	3300031962	Hardwood Forest Soil	MVLVSSPPEFYVQGSVVYCKKLPSEDYILGVRLDAPVEHWIEVLGLGES
Ga0307471_1027536121	3300032180	Hardwood Forest Soil	TLGIRLVTRQFWESAETVLISSPPGLCVQGSVVYCKKLPSDDHLLGIRLDAPIERWIEALEDRES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094983

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences