Metagenome / Metatranscriptome Family F094980

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094980
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	74 residues
Representative Sequence	AEGNLKKSIDAFPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Number of Associated Samples	96
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.67 %
% of genes near scaffold ends (potentially truncated)	94.29 %
% of genes from short scaffolds (< 2000 bps)	86.67 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.333 % of family members)
Environment Ontology (ENVO)	Unclassified (24.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.381 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.43% β-sheet: 0.00% Coil/Unstructured: 48.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF14622	Ribonucleas_3_3	74.29
PF00717	Peptidase_S24	2.86
PF00035	dsrm	0.95
PF00072	Response_reg	0.95
PF05170	AsmA	0.95
PF00579	tRNA-synt_1b	0.95
PF10502	Peptidase_S26	0.95
PF07969	Amidohydro_3	0.95
PF02597	ThiS	0.95
PF00005	ABC_tran	0.95
PF00080	Sod_Cu	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.95
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.95
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.95
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.95
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.95
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.19 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	19.05 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	14.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.33 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10591691	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300002917\|JGI25616J43925_10117711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1083	Open in IMG/M
3300003368\|JGI26340J50214_10151549	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300004080\|Ga0062385_10265752	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300004091\|Ga0062387_101607463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	525	Open in IMG/M
3300005434\|Ga0070709_11329770	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005610\|Ga0070763_10004847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5148	Open in IMG/M
3300005640\|Ga0075035_1348320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	581	Open in IMG/M
3300007265\|Ga0099794_10170455	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300009012\|Ga0066710_100966291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1313	Open in IMG/M
3300009525\|Ga0116220_10088495	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300009635\|Ga0116117_1163043	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009646\|Ga0116132_1257219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300009665\|Ga0116135_1056332	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300009759\|Ga0116101_1047838	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300009764\|Ga0116134_1022048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2589	Open in IMG/M
3300010361\|Ga0126378_10651589	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300011120\|Ga0150983_11531328	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300011120\|Ga0150983_13541632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300011270\|Ga0137391_10336630	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300012582\|Ga0137358_10450525	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300012927\|Ga0137416_10562897	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300014164\|Ga0181532_10725979	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300014657\|Ga0181522_10015136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4161	Open in IMG/M
3300014838\|Ga0182030_11568680	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300017940\|Ga0187853_10227366	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300017943\|Ga0187819_10235052	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300017946\|Ga0187879_10750261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300017946\|Ga0187879_10849322	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300018020\|Ga0187861_10213989	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300018025\|Ga0187885_10428503	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300018026\|Ga0187857_10190865	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300018033\|Ga0187867_10000597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	32033	Open in IMG/M
3300018038\|Ga0187855_10734961	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300018040\|Ga0187862_10512783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300018047\|Ga0187859_10066588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1897	Open in IMG/M
3300018047\|Ga0187859_10566704	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300018086\|Ga0187769_10812171	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300018468\|Ga0066662_12382625	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300019177\|Ga0184592_123702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300019258\|Ga0181504_1415472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300019278\|Ga0187800_1047494	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2132	Open in IMG/M
3300019284\|Ga0187797_1208666	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300019786\|Ga0182025_1172713	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2399	Open in IMG/M
3300020580\|Ga0210403_10887605	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300021180\|Ga0210396_10304209	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300021180\|Ga0210396_10430598	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300021402\|Ga0210385_11519630	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021404\|Ga0210389_10158056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1759	Open in IMG/M
3300021406\|Ga0210386_10478171	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300021406\|Ga0210386_10812813	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300021407\|Ga0210383_10742244	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300021432\|Ga0210384_11260833	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300021474\|Ga0210390_11049667	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300021474\|Ga0210390_11166496	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300022522\|Ga0242659_1125495	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300022730\|Ga0224570_114108	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300022733\|Ga0224562_1018104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300023019\|Ga0224560_101050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1959	Open in IMG/M
3300023030\|Ga0224561_1009680	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300024049\|Ga0233359_1046154	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300024176\|Ga0224565_1030963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300025500\|Ga0208686_1073243	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300025506\|Ga0208937_1003496	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4709	Open in IMG/M
3300027590\|Ga0209116_1021278	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300027591\|Ga0209733_1130476	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300027633\|Ga0208988_1010979	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2269	Open in IMG/M
3300027671\|Ga0209588_1174375	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300027729\|Ga0209248_10047416	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300027855\|Ga0209693_10189426	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300027889\|Ga0209380_10834328	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027895\|Ga0209624_10781896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027903\|Ga0209488_10537736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300028047\|Ga0209526_10817375	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300028536\|Ga0137415_10546283	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300028747\|Ga0302219_10316131	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300028813\|Ga0302157_10227371	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300028813\|Ga0302157_10723927	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300028866\|Ga0302278_10134720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1311	Open in IMG/M
3300028906\|Ga0308309_11247705	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300029915\|Ga0311358_11132408	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300029943\|Ga0311340_10078481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3737	Open in IMG/M
3300029993\|Ga0302304_10264104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300030007\|Ga0311338_10699204	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300030043\|Ga0302306_10271067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300030053\|Ga0302177_10554605	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300030058\|Ga0302179_10001797	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	12737	Open in IMG/M
3300030399\|Ga0311353_10117129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2574	Open in IMG/M
3300030509\|Ga0302183_10056264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1560	Open in IMG/M
3300030518\|Ga0302275_10568362	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300030580\|Ga0311355_10310724	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1580	Open in IMG/M
3300030740\|Ga0265460_10797835	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300030760\|Ga0265762_1080112	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300030879\|Ga0265765_1060619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300030940\|Ga0265740_1020766	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031028\|Ga0302180_10000022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	175191	Open in IMG/M
3300031525\|Ga0302326_11889572	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300031708\|Ga0310686_110415626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	37130	Open in IMG/M
3300031708\|Ga0310686_111938946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300031715\|Ga0307476_10006269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7220	Open in IMG/M
3300031718\|Ga0307474_10319229	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300031754\|Ga0307475_11038063	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031823\|Ga0307478_11391085	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031823\|Ga0307478_11434764	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300034282\|Ga0370492_0100720	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.29%
Aquatic	Environmental → Aquatic	24.76%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.14%
Freshwater	Environmental → Aquatic → Freshwater	24.76%
Peat	Environmental → Terrestrial → Peat	16.19%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.19%
Loam	Environmental → Terrestrial → Soil → Loam	12.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.67%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	17.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.95%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.76%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.95%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.95%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.95%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.95%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005640	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_052 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019177	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZI1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022730	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2	Host-Associated	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300023030	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030940	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_105916911	3300001593	Forest Soil	EGNLRKSIDAFPKEPDPIAIFRLSVALDMQNKYPEALKYANQAVSLTKEGTNAGDAARKEKDRLTQLSSGGAPPKN*
JGI25616J43925_101177112	3300002917	Grasslands Soil	AMPPPVDAVTVLRLSLALDQQGKYPEALKYANQVVDLTKEGTNAGDAARKEKDRLTQLLGSAPPAKN*
JGI26340J50214_101515492	3300003368	Bog Forest Soil	AKAWASAEENLKKSIDADPQEPDPIAVFRLSVALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0062385_102657522	3300004080	Bog Forest Soil	VDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTDAGDAARKEKDRLTQLTGSGAPPVK*
Ga0062387_1016074631	3300004091	Bog Forest Soil	DPIAVFRLSVALDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLIGGSSTPAPAPPKN*
Ga0070709_113297701	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	QVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLNGGGAPPAKN*
Ga0070763_100048471	3300005610	Soil	RKSIDAFPQQVDPVAVFRLSVALDMQNKYPEALKYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK*
Ga0075035_13483201	3300005640	Permafrost Soil	EKDLRKSIDAYPQQVDPIAVFRLSVALDMQNKYPEAMKYANQAVDLTKEGTPAGTAARQEKDRLTKLSSGSAPATPKN*
Ga0099794_101704551	3300007265	Vadose Zone Soil	TNLRKSIEAFPQQPDPIAVFRLAVALDMENKYPEAMKYANQAVDLTKEDTAAGKAARAEKDRLTKLSVGAAPAQNPAPPK*
Ga0066710_1009662911	3300009012	Grasslands Soil	DAEGDLRKSIDVFPQQVDPIAVLRLSIALENQKRYPEALKYASQAVELTKEGTNAGAAARAEKDRLTKLNSGTEPTPSSAPPKN
Ga0116220_100884953	3300009525	Peatlands Soil	PEQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGSAPPAKN*
Ga0116117_11630432	3300009635	Peatland	NLRKSIEAYPQEVDSIAVFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK*
Ga0116132_12572192	3300009646	Peatland	AEQNLKKSIDAFPQQPDPIAIFRLSVALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0116135_10563323	3300009665	Peatland	FPQQPDPIAVFRLSVALDMQNKYPDAMKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0116101_10478382	3300009759	Peatland	DALPEQADPIAVFRLSVALDMQNKYPDALKVANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAK*
Ga0116134_10220481	3300009764	Peatland	PIAIFRLSVALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISAPPAK*
Ga0126378_106515893	3300010361	Tropical Forest Soil	SAETNLRKSIDALPQNPDPIAVFRLSVALDMQNKYPEALKYANQAVDMTKEDTAAGKAARAEKDRLMKLTAGTSPAPVPTSPK*
Ga0150983_115313282	3300011120	Forest Soil	AAEVNLKKSIDAFPQQPDPIAVFRLSVALDMQNKYPDAMKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK*
Ga0150983_135416321	3300011120	Forest Soil	LAFTAKNWPDAEAGLRKSIDALPQQPDPIAVFRLSVALDMQGKYPEGLKFANQAVDLTKDRPDSAAGKAAREEKDRLTRLNMG
Ga0137391_103366301	3300011270	Vadose Zone Soil	KSAWADAEGNLRKSIDAFPQQVDPVAVFRLSVALDMQNRYPEALKFADQAVGLTKEGTSAGDAARKEKDRLTQLLMVSAPPAK*
Ga0137358_104505252	3300012582	Vadose Zone Soil	EGNLRKSIDAFPQQVDPVAVFRLSVALDMQNKYAEGLKFANQAVDLTKEGTNAGDAARKEKDRLTQLLSGTTPPPK*
Ga0137416_105628972	3300012927	Vadose Zone Soil	AEAEAGLRKSIDAFPQQIDPIAVFRLAVALDMQNKIPEALKYANQAVDLTKEETAAGKAARAEKDRLTKLNVGAGPAQTPGPPK*
Ga0181532_107259792	3300014164	Bog	NAKAWASAEENLKKSIEALPQQPDPIAVFRLSVALDMQNKYPDALKYADQAVALTKAGTNAGDAARKEKDRLVQLIGGISEPPAK*
Ga0181522_100151365	3300014657	Bog	WTDAEADLRKSIDAFPQQVDPVAVLRLSLALDQQNKYAEALKYANQAVDLTKDGTPAGKAARDEKDRLTRLNSGTAPGQNPAPK*
Ga0182030_115686802	3300014838	Bog	QEVDSIAVFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK*
Ga0187853_102273661	3300017940	Peatland	AEGNLRKSIDALPEQPDPIAVFRLSVALDMQNKYPDALKVANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAK
Ga0187819_102350521	3300017943	Freshwater Sediment	ETNLKKSIDAYPQQVDPVAVFRLSVALDMQKKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0187879_107502611	3300017946	Peatland	SIDAFPQQPDPIAVFRMSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187879_108493221	3300017946	Peatland	QIDPVAVLRLSLTLDQENKYPEALKYANQAADMTKEGTATGDAARKEKDRLTQLTGGAPAVK
Ga0187861_102139891	3300018020	Peatland	QNLKKSIDAFPQQPDPIAIFRLSVALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0187885_104285031	3300018025	Peatland	IDAFPQQVDPIAVFRLSVALDMQSKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTSGTPPAK
Ga0187857_101908651	3300018026	Peatland	EGNLRKSIEAYPQEVDSIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK
Ga0187867_100005973	3300018033	Peatland	VFRLSVALDMQNKYPDALKYADQAVALTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187855_107349611	3300018038	Peatland	NAKAWTDAEADLRKSIDAFPQQVDPVAVLRLSLALDQQTKYAEALKYANQAVDLTKEGTAAGKAARDEKDRLTRLNSGTAPGQTPAPK
Ga0187862_105127832	3300018040	Peatland	WPSAEDNLKKSIDAFPQQPDPIAIFRLSVALDMQNKYPDALKYANQAVDLTKEGTNAGDAARKEKDRLIQLIGGIK
Ga0187859_100665883	3300018047	Peatland	FNAKAWADAESDLKKSIDAFPQQPDAIAIFRLSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKTGWCS
Ga0187859_105667041	3300018047	Peatland	LDFNNKQWTAAETDLKKSIDAFPQQPDPIAVFRLSVALDMQNKYPDAMKYADQAVDLTKPGTSAGDAARKEKDRLVQLIGGISEPPAK
Ga0187769_108121712	3300018086	Tropical Peatland	LTIHPIEAFPDQVDPIAVLRLAVALDMQSKIPEALKYANQAVELTKEGTNAGDAARKEKDRLTQLNGSSAPPAKN
Ga0066662_123826252	3300018468	Grasslands Soil	AEENLRKSIDALPQQIDPVTVFRLSVALDMQNKYPEALKYANQAVELTKEGTNAGDAARKEKDRLTELTKGSTPQAK
Ga0184592_1237021	3300019177	Soil	ANAEGNLRKSIDAFPQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0181504_14154722	3300019258	Peatland	DFNAKDWASAEVNLKKSIDAFPQQPDPVAVFRLSVAMDMQNKYPDALKYANQAVDLTKPGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0187800_10474942	3300019278	Peatland	LKKSIDAYPQQPDPIAVFRLSVALDYQNKYPDALKYANQAVELTKAGTNAGDAARKEKDRLIQLIGGISEPPAK
Ga0187797_12086662	3300019284	Peatland	SIDAYPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTVAGKAARDEKDRLTQLTSGAPPTKN
Ga0182025_11727132	3300019786	Permafrost	MRKEILRKSIDAFPQQVDPIAVFRLSVALDMQNKYPEALKFANQAVDLTKPGTAAGDAARKEKDRLSS
Ga0210403_108876052	3300020580	Soil	KSIDAFPQQIDPVAVLRLSLTLDQENKYPEALKYANQAVDLTKEGTASGDAARKEKDRLTQLTGGAPPAK
Ga0210396_103042093	3300021180	Soil	GNLRKSIDAYPQEVDPIAVFRLSVALDMQGKYPEAMKYANQAVGLTKEGTAAGKAARDEKDRLTQLTGGGSSPAPTPPKN
Ga0210396_104305981	3300021180	Soil	DAEGKLRKSIDAFPQQVDPIAVFRLSVSLDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGAAAPVKN
Ga0210385_115196302	3300021402	Soil	DLRKSIDAFPQQPDPVAIFRLSVSLDMQSKYPEALKYADQAVSLTKEGTGAGDAARKEKDRLTQLTGGAAPPAK
Ga0210389_101580561	3300021404	Soil	RKSIDAFPQQVDPIAVFRLSVSLDMQNKYPEALKYANQAVDLTKEGTGAGDAARKEKDRLTQLTGGAAAPVKN
Ga0210386_104781711	3300021406	Soil	EANLRKSIDAFPQQLDPVGVLRLSLTLDQENKYPEALKYASQAVDLTKEGTASGDAARKERDRLTQLTGGAAPAKN
Ga0210386_108128131	3300021406	Soil	FPQQVDPVAVLRLSLALDQQNKYPEALKYANQAVDMTKEGTATGDAARKEKDRLTQLTGGAPAVK
Ga0210383_107422442	3300021407	Soil	AYPQEVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTAAGKAARDEKDRLTQLTGGSSSPAPAPPKN
Ga0210384_112608332	3300021432	Soil	DAFPQQPDPVAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKERDRLIQLIGGVPAIK
Ga0210390_110496672	3300021474	Soil	NQKNWTNAEADLRKSIDAFPQQPDPVAIFRLSVSLDMQSKYPEALKYADQAVSLTKEGTGAGDAARKEKDRLTQLTGGAAPPAK
Ga0210390_111664962	3300021474	Soil	AFPQQPDAIAIFRLSVALDMQNKYPDALKYANQAVDLTKEGTNAGDAARKEKDRLIQLIGGIK
Ga0242659_11254952	3300022522	Soil	IDAFPQEPDPIAVFRLSVALDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLTGGSSTPAPAPPKN
Ga0224570_1141082	3300022730	Rhizosphere	PDPIAIFRLSVALDMQNKYPEALKFANQAVDLTKEGTAAGKAARDEKDRLTQLTGGAAPAKN
Ga0224562_10181042	3300022733	Soil	SIDAFPQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0224560_1010503	3300023019	Soil	FTQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0224561_10096802	3300023030	Soil	NLRKSIEAFPQQPDPIAIFRLSVALDMQNKYPEALKFANQAVDLTKEGTAAGKAARDEKDRLTQLTGGAAPAKN
Ga0233359_10461542	3300024049	Soil	GNLRKSIDAFPKEPDPIAVFRLSVALDMQNKYPEALKYANQAVGMTKEGTNAGDAARKEKDRLTQLSSGGAPPAKN
Ga0224565_10309631	3300024176	Plant Litter	LRKSIDAFPQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0208686_10732432	3300025500	Peatland	DPIAIFRLSVALDMQNKYPDALKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0208937_10034965	3300025506	Peatland	KAWAAAEENLKKSIDVFPQQPDPIAVFRLSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0209116_10212782	3300027590	Forest Soil	EENLKKSIDVFPQQPDPIAVFRLSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLVQLIGGISEPPAK
Ga0209733_11304762	3300027591	Forest Soil	KEPDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLSSGGAPPAKN
Ga0208988_10109791	3300027633	Forest Soil	WPDAEADLRKSIDAFPQQVDPIAVFRLAVALDMQNKIPEALKYANQAVDMTKEETAAGKAARAEKDRLTKLNVGTAPAQASGPPK
Ga0209588_11743751	3300027671	Vadose Zone Soil	TNLRKSIEAFPQQPDPIAVFRLAVALDMENKYPEAMKYANQAVDLTKEDTAAGKAARAEKDRLTKLSVGAAPAQNPAPPK
Ga0209248_100474162	3300027729	Bog Forest Soil	EPDPIAVFRLSVALDMQSKYPEAMKYANQAVSMTKEGTPAGKAARDEKDRLTQLIGGGGTPAPAPPKN
Ga0209693_101894261	3300027855	Soil	RKSIDAFPQQVDPVAVFRLSVALDMQNKYPEALKYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK
Ga0209380_108343282	3300027889	Soil	VALEPGPALVVFAQQIDPVAVLRLSLTLDQENKYPEALKYANQAVDLTKEGTASGDAARKEKDRLTQLTGGAPSAK
Ga0209624_107818962	3300027895	Forest Soil	WADAEGNLRKSIDAFPQQVDPVAVFRLSVALDMQNKYPEALRYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK
Ga0209488_105377362	3300027903	Vadose Zone Soil	DFNAKAWPDAETNLRKSIEAFPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTSAGDAARKEKDRLTQLSSGGAPPVKN
Ga0209526_108173752	3300028047	Forest Soil	ALPQQVDPVTVFRLSVALDMQNKYPEAMKYANQAVDLTKEGTNAGDAARKEKDRLTQLSSGGAPPAKK
Ga0137415_105462832	3300028536	Vadose Zone Soil	RKSIDAFPQQVDPIAVFRLAVALDMQNKIPEALKYANQAVDLTKEETAAGKAARAEKDRLTKLNVGAGPAQTPGPPK
Ga0302219_103161312	3300028747	Palsa	AEGNLKKSIDAFPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Ga0302157_102273712	3300028813	Bog	KAWGDAEANLKQSIEAYPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGSGAPPAK
Ga0302157_107239272	3300028813	Bog	EINLRKSIDAFPQQVDAVAVLRLSLSLDQQNKYPEALKYANQAVDLTKQGSNVGDAARTEKDRLTQLTSGGAPPAK
Ga0302278_101347203	3300028866	Bog	AAAEGNLRKSIEAYPQEVDSIAVFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK
Ga0308309_112477051	3300028906	Soil	AYPQQVDPVAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNIGDQARKERDRLTQLTGGSAPPAKN
Ga0311358_111324082	3300029915	Bog	NAKAWAAAEGNLRKSIEAYPQEVDSIAVFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDAPAK
Ga0311340_100784815	3300029943	Palsa	DAEGNLRKSIDAFPQQVDAIAVFRLSVALDMQSKYPEALKFANQAVDLTKEGTAAGDAARKERDRLTQLTGGGTPAPAPPKN
Ga0302304_102641042	3300029993	Palsa	NAKAYADAEGNLRKSIDAFPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Ga0311338_106992041	3300030007	Palsa	NLRKSIDAFPQQVDPIAVFRLSVALDMQSKYPEALKYANQAVDLTKEGTAAGDAARKERDRLTQLTGGGTPAPAPPKN
Ga0302306_102710671	3300030043	Palsa	WGDAETNLKKSIEAYPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDSTKEGTPAGDAARKEKDRLTQLTGSGAPPAK
Ga0302177_105546051	3300030053	Palsa	YPQEVDPIAVFRLSVALDMQNKYPDALKYANQAVDLTKAGTNAGDAARKEKDRLIQLVGGIPDTPKN
Ga0302179_1000179712	3300030058	Palsa	RKSIDAFPQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTGAGDAARKEKDRLIQLIGGISEPPKN
Ga0311353_101171294	3300030399	Palsa	ADLRKSIDAFPQQVDPVAVLRLSLALDQQTKYAEALKYANQAVDLTKEGTAAGKAARDEKDRLTRLNSGTAPGQNPAPK
Ga0302183_100562643	3300030509	Palsa	GNLRKSIEAYPQEVDPIAVFRLSVALDMQGKYPEALKFANQAVDLTKPGTGAGDAARKEKDRLIQLIGGISEPPAK
Ga0302275_105683621	3300030518	Bog	PQQVDAVAVLRLSLSLDQQNKYPEALKYANQAVDLTKQGSNVGDAARTEKDRLTQLTSGGAPPAK
Ga0311355_103107243	3300030580	Palsa	FNAKAYADAEGNLRKSIDAFPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDLTKEGTNAGDAARKEKDRLTQLTGNGAPPAK
Ga0265460_107978352	3300030740	Soil	AEANLRKSIDAFPQQVDPIAVFRLSVALDMQNRYPEALKFANQAVDLTKEGTGAGDAARKEKDRLTQLTSGSAPPAK
Ga0265762_10801121	3300030760	Soil	QQPDPIAVFRLSVALDMQNKYPDAMKYADQAVDLTKAGTGAGDAARKEKDRLVQLIGGISEPPAK
Ga0265765_10606192	3300030879	Soil	AFPQQIDPVAVLRLSLALDQQNKYPEALKYANQAVDMTKEGTATGDAARKEKDRLTQLTGGAPAVK
Ga0265740_10207662	3300030940	Soil	ANLRKSIEAFPQQIDPVAVLRLSLALDQQNKYPEALKYANQAVDMTKEGTATGDAARKEKDRLTQLTGGAPAVK
Ga0302180_10000022155	3300031028	Palsa	LDYNAKAWGDAETNLKKSIEAYPQQVDPIAVFRLSVALDMQNKYPEALKYANQAVDSTKEGTPAGDAARKEKDRLTQLTGSGAPPAK
Ga0302326_118895722	3300031525	Palsa	KSIDAYPQQLDPVALIRLSVALDMQSKYPDALKFANQAVDLTKEGTNVGDQARKERDRLTQLTGGSAPPAKN
Ga0310686_11041562617	3300031708	Soil	LRKSIDAFPQQVDPIAVFRLSVSLDMQNKYPEALKFANQAVDMTKEGTNAGDAARKEKERLTQLTSGAAPPAK
Ga0310686_1119389462	3300031708	Soil	KAWANAEGNLRKSIDAFPQQPDAIAIFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPAKN
Ga0307476_100062691	3300031715	Hardwood Forest Soil	IAVFRLSVALDMQNKYPEALKYANQAVDLTKPGTGAGDAARKEKDRLIQLIGGISEPPAK
Ga0307474_103192291	3300031718	Hardwood Forest Soil	DAFPQQVDPVAVFRLSVALDMQNKYPEALKFANQAVDLTKPGTGAGDAARKEKDRLIQLIGGINDTPAK
Ga0307475_110380631	3300031754	Hardwood Forest Soil	AFPQQMDPVAVFRLSVALDMQNKYPEALKFAKQAVDLTKEGTSAGDAARKERDRLSQLLGSAAPPAK
Ga0307478_113910852	3300031823	Hardwood Forest Soil	NAKAWADAEGNLRKSIEAYPQEVDPIAVFRLSVALDMQSKYPEAMKYANQAVDMTKEGTAAGKAARDEKDRLTQLTGGSSSPAPTPPKN
Ga0307478_114347642	3300031823	Hardwood Forest Soil	PQEVDPIAVFRLSVALDMQGKYPEAMKYANQAVGLTKEGTAAGKAARDEKDRLTQLTGGGSSPAPTPPKN
Ga0370492_0100720_962_1180	3300034282	Untreated Peat Soil	KSIEAYPQEVDSIAVFRLSVALDMQNKYPEALKYANQAVDLTKAGTNAGDAARKEKDRLIQLIGGIPDTPVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094980

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences