Basic Information | |
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Family ID | F094967 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 56 residues |
Representative Sequence | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Number of Associated Samples | 80 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 82.69 % |
% of genes near scaffold ends (potentially truncated) | 26.67 % |
% of genes from short scaffolds (< 2000 bps) | 79.05 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (54.286 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (30.476 % of family members) |
Environment Ontology (ENVO) | Unclassified (74.286 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (84.762 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 92.98% β-sheet: 0.00% Coil/Unstructured: 7.02% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Marine Deep Ocean Seawater Background Seawater Marine Seawater Marine Water Column Marine Seawater Salt Marsh Marine Hydrothermal Vent Plume |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
SI34jun09_120mDRAFT_10433451 | 3300000225 | Marine | AKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
SI36aug09_120mDRAFT_10631511 | 3300000239 | Marine | PVTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
GBIDBA_100425305 | 3300001683 | Hydrothermal Vent Plume | LTKKDWAKWHALLGDMNQCELDAIYLFRSLMIDEDHWEEWVYKFATV |
JGI26254J51713_10895921 | 3300003584 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQ |
JGI26247J51722_10802541 | 3300003588 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0066609_101674552 | 3300004278 | Marine | LLGDMEQCELDAIYLFRSLMIDEDHWAEWVYKFATVAEQLKRETLH* |
Ga0066606_100682193 | 3300004280 | Marine | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVA |
Ga0066858_100184231 | 3300005398 | Marine | LGQVVPLLGDMEQCEMDASYLFRSLMIDEDYSEEWVYKFASGSEQLKQENCIDK* |
Ga0066858_100219544 | 3300005398 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQETLH* |
Ga0066848_100154132 | 3300005408 | Marine | VVPLLGDMEQCEMDASYLFRSLMIDEDYSEEWVYKFASGSEQLKQENCIDK* |
Ga0066848_101199622 | 3300005408 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQETLH* |
Ga0066848_101544101 | 3300005408 | Marine | VTKKDWAKWHVLLGDMEQCEMDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0066859_102643871 | 3300005425 | Marine | MTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0066854_100082862 | 3300005431 | Marine | VTKKDWAKWHALLGDIEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0066854_102495831 | 3300005431 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWAEWVYKFATVAEQLK |
Ga0066854_103254342 | 3300005431 | Marine | VTKKDWAKWHILLGDMEQCEMDAIYLFRSLMIDEEYWGEWVYKFATVAEQLKQETLH* |
Ga0066827_101561842 | 3300005509 | Marine | RCPVPMTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0066834_102368763 | 3300005596 | Marine | VTKKDWAKWHVLLGDMNQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0008649_100277814 | 3300005838 | Marine | VTKKDWAKWHILLGDMEQCELDAIYLFRSLMIEEEHWEEWVYKFATVAEQLKQETLH* |
Ga0008649_100620213 | 3300005838 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIAEDYWEEWVYKFATVAEQLKQETLH* |
Ga0008649_100741701 | 3300005838 | Marine | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0008649_101298861 | 3300005838 | Marine | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVFKFASVAEQLKRETLH* |
Ga0008649_101438073 | 3300005838 | Marine | VTKKDWAKWHALLGDMNQCELDAIYLFRCLMIEEDHWEEWVYKFATVAEQLKRETLH* |
Ga0008649_102995882 | 3300005838 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEDWVYKFATVAEQLKRETLH* |
Ga0082019_10329684 | 3300006093 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIDEDHWEEWVYKFATVAEQLKQETLH* |
Ga0104999_10170083 | 3300007504 | Water Column | VTKKDWAKWHTLLGDMEQCEMEAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0104999_10370553 | 3300007504 | Water Column | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0105016_10816913 | 3300007512 | Marine | MTKRDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0105019_10554403 | 3300007513 | Marine | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWVEWVYKFATVAEQLKQETLH* |
Ga0105020_11294092 | 3300007514 | Marine | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDHWAEWVYKFATVAEQLKRETLH* |
Ga0105014_10723381 | 3300007755 | Marine | PVTKRDWAKWHALLGDMEQCELEAIYLFRCLMIEEEHWTEWVYKFATVAEQLKQETLH* |
Ga0105664_12313712 | 3300007756 | Background Seawater | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMVEEDHWEEWVYKFATVAEQLKRETLH* |
Ga0105018_11352722 | 3300007760 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0105010_10956161 | 3300007765 | Marine | MTKRDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115652_100153218 | 3300008624 | Marine | MTKRDWAKWHALLGDMEQCELEAIYLFRFLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115653_11223092 | 3300008625 | Marine | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQGTLH* |
Ga0115653_11412701 | 3300008625 | Marine | VTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAGQLKQETLH* |
Ga0115656_11258171 | 3300008627 | Marine | MTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115656_11903751 | 3300008627 | Marine | LLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115657_11423102 | 3300008735 | Marine | VTKKDWAKWHALLGDMEQCELEAIHLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115657_12170211 | 3300008735 | Marine | VTKRDWAKWHALLGDMEQCELEAIYLFRCLMIEEEHWTEWVYKFATVAEQLKQETLH* |
Ga0115650_10285014 | 3300008954 | Marine | MTKKDWAKWHALLGDMEQCELDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115650_11603131 | 3300008954 | Marine | MTKKDWAKWHALLGDMEQCELEAIHLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH* |
Ga0115649_13552952 | 3300009008 | Marine | VTKRDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWVEWVYKFATVAEQLKQETLH* |
Ga0117902_12838292 | 3300009104 | Marine | VTKKDWAKWHVLLGDMEQCELEAIYLFRCLMIEEDHWTEWVYKFASVAQQIKDETLH* |
Ga0117917_10102133 | 3300009106 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH* |
Ga0118729_11765723 | 3300009130 | Marine | VTKKDWAKWHTLLGDMEQCEMEAIYLFRCLMIEEDHWTEWVYKIATVAEQLKQETLH* |
Ga0114996_108549802 | 3300009173 | Marine | LTKKDWAEWHALLGDMEQCELDAIYLFRSLMIEEDYWEEWVYKFATVAEQLKQETLH* |
Ga0114996_111275061 | 3300009173 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWAEWVYKFATVAEQLKQENLH* |
Ga0114993_106448982 | 3300009409 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLVRSLMIDEDYWEEWVYKFATVAEQLKQETLH* |
Ga0115002_100759272 | 3300009706 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYRFATVAEQLKQETLH* |
Ga0114999_111978742 | 3300009786 | Marine | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0098047_103460761 | 3300010155 | Marine | VTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWEEWVYKFATVAEQLKQETLH* |
Ga0133547_103846453 | 3300010883 | Marine | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDHWEEWVYKFATVAEQLKQETLH* |
Ga0181583_105113462 | 3300017952 | Salt Marsh | LTKRDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH |
Ga0181569_104751421 | 3300017986 | Salt Marsh | KKLTKRDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH |
Ga0181574_101625661 | 3300020056 | Salt Marsh | AKWHALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH |
Ga0211537_10086543 | 3300020262 | Marine | MTKKDWAKWHVLLGDMEQCEMDAIHLFRTLMIEEDEWEDWVFKIATVAEQLKQETLH |
Ga0211524_10471151 | 3300020291 | Marine | MTKKDWAKWHVLLGDMEQCEMDAIHLFRTLMIEEDEWEDWVFKIATVAEQL |
Ga0211560_10597451 | 3300020321 | Marine | VTKKDWAKWHILLGDMEQCEMDAIYLFRSLMIDEEYWGEWVYKFATVAEQLKQETLH |
Ga0211572_10775873 | 3300020330 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKRETLH |
Ga0211569_11017393 | 3300020331 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0211571_10607223 | 3300020338 | Marine | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0211570_10872851 | 3300020344 | Marine | VTKKDWAKWHVLLGDMNQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0211531_10094702 | 3300020361 | Marine | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH |
Ga0211531_10835623 | 3300020361 | Marine | MTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH |
Ga0211472_100724561 | 3300020409 | Marine | MTKRNWAKWHALLGDMEQRELEAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH |
Ga0211525_100474434 | 3300020423 | Marine | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVADQLKQETLH |
Ga0211521_103164301 | 3300020428 | Marine | MTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWVEWVYKFATVAEQLKQETLH |
Ga0206683_104606062 | 3300021087 | Seawater | MTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDHWAEWVYKFATVAEQLKRETLH |
Ga0187833_101055203 | 3300022225 | Seawater | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQETLH |
Ga0187833_101756384 | 3300022225 | Seawater | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQETLH |
Ga0187833_101985872 | 3300022225 | Seawater | VVPLLGDMEQCEMDASYLFRSLMIDEDYSEEWVYKFASGSEQLKQENCIDK |
Ga0187833_106714011 | 3300022225 | Seawater | NSGQHVLLGDMEQCEMDAIYLFRSLMLDEDYWEEWVYKFATVAEQLKQETLH |
Ga0187827_100580224 | 3300022227 | Seawater | MTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWEEWVYKFATVAEQLKQETLH |
(restricted) Ga0233428_10468504 | 3300022888 | Seawater | VTKKDWAKWHILLGDMEQCELDAIYLFRSLMIEEEHWEEWVYKFATVAEQLKQETLH |
(restricted) Ga0233433_102994471 | 3300022931 | Seawater | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKRETLH |
(restricted) Ga0233433_103456383 | 3300022931 | Seawater | VTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIAEDYWEEWVYKFATVAEQLKQETLH |
(restricted) Ga0233427_100179143 | 3300022933 | Seawater | VTKKDWAKWHALLGDMNQCELDAIYLFRCLMIEEDHWEEWVYKFATVAEQLKRETLH |
(restricted) Ga0233427_100860721 | 3300022933 | Seawater | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0255768_104039772 | 3300023180 | Salt Marsh | HALLGDMEQCEMDAIYLFRCLMIEEDHWAEWVYKFATVAEQLKQETLH |
Ga0209658_10195612 | 3300025592 | Marine | VTKKDWAKWHILLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0209662_10884622 | 3300025596 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEEHWEEWVYKFATVAEQLK |
Ga0209360_10489091 | 3300025665 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVFKFASVAEQ |
Ga0208699_10198971 | 3300025776 | Deep Ocean | ALLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQETLH |
Ga0208275_11154391 | 3300026182 | Marine | PLLGDMEQCEMDASYLFRSLMIDEDYSEEWVYKFASGSEQLKQENCIDK |
Ga0208128_11020081 | 3300026186 | Marine | GQVVPLLGDMEQCEMDASYLFRSLMIDEDYSEEWVYKFASGSEQLKQENCIDK |
Ga0207984_10703062 | 3300026202 | Marine | VTKKDWAKWHALLGDMEQCELEAIYLFRCLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0208406_11558482 | 3300026205 | Marine | PISVTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0208406_11608103 | 3300026205 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWEEWVYKFATVAEQLKQ |
Ga0208895_11041002 | 3300026207 | Marine | VTKKDWAKWHALLGDIEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0209501_105824331 | 3300027844 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWAEWVYKFATVAEQLKQENLH |
Ga0209402_107603072 | 3300027847 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDYWEEWVYKFATVAEQLKQETLH |
Ga0257122_10885512 | 3300028177 | Marine | TKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0257124_10727561 | 3300028188 | Marine | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIAEDYWEEWVYKFATVAEQLKQETLH |
Ga0257116_11045032 | 3300028277 | Marine | WHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKQETLH |
Ga0302119_100771881 | 3300031606 | Marine | LTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKRETL |
Ga0302119_103296323 | 3300031606 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIEEDHWEEWVFKFASVAEQLKRETLH |
Ga0302122_100063212 | 3300031675 | Marine | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIAEDYWEEWVYKFATVAEQLKQETLH |
Ga0302122_100425671 | 3300031675 | Marine | LTKKDWAKWHALLGDMEQCELDAIYLFRSLMIAEDYWEEWVYKFATVAEQLKQETLH |
Ga0302139_103883932 | 3300031693 | Marine | DWAKWHALLGDMEQCELDAIYLFRSLMIDEDYWAEWVYKFATVAEQLKQENLH |
Ga0315326_102741981 | 3300031775 | Seawater | VLLGDMEQCELEAIYLFRCLMIEEEHWTEWVYKFATVAEQLKQETLH |
Ga0315327_103517361 | 3300032032 | Seawater | MTKKDWAKWHALLGDMEQCEMDAIYLFRCLMIEEDHWTEWVYKFATVAEQLKQETLH |
Ga0315329_106285632 | 3300032048 | Seawater | VTKKDWAKWHALLGDMEQCELDAIYLFRSLMIDEDHWAEWVYKFATVAEQLKQETLH |
Ga0310345_124790931 | 3300032278 | Seawater | ARGPIPVTKKDWAKWHVLLGDMEQCELDAIYLFRSLMIEEDHWEEWVYKFATVAEQLKRETLH |
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