Metagenome / Metatranscriptome Family F094934

Overview

Basic Information

• Family ID: F094934
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 105
• Average Sequence Length: 62 residues
• Representative Sequence: MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLH
• Number of Associated Samples: 57
• Number of Associated Scaffolds: 105

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 2.88 %
• % of genes near scaffold ends (potentially truncated): 91.43 %
• % of genes from short scaffolds (< 2000 bps): 95.24 %
• Associated GOLD sequencing projects: 52
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (97.143 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (30.476 % of family members)
• Environment Ontology (ENVO): Unclassified (35.238 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (45.714 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 5.56%
  β-sheet: 0.00%
  Coil/Unstructured: 94.44%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02689	Herpes_Helicase	3.81

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
All Organisms	root	All Organisms	2.86 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
cellular organisms	root	All Organisms → cellular organisms	2.86 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.86 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.90 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.95 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	0.95 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.95 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	0.95 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.95 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.95 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	0.95 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.95 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	0.95 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.95 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	0.95 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.95 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	0.95 %

Level 11

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.95 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	0.95 %

Level 12

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Leotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	0.95 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.95 %

Level 13

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	0.95 %
Erysiphales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Erysiphales	0.95 %

Level 14

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Erysiphaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Erysiphales → Erysiphaceae	0.95 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	0.95 %

Level 15

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.14 %
Erysiphe	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Erysiphales → Erysiphaceae → Erysiphe	0.95 %
Thalassiosira oceanica	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	0.95 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002373|B570J29628_102766	Not Available	723
3300002408|B570J29032_109052055	Not Available	578
3300003910|JGI26437J51864_10013138	Not Available	1815
3300005525|Ga0068877_10352638	Not Available	839
3300005525|Ga0068877_10445709	Not Available	723
3300005527|Ga0068876_10426636	Not Available	736
3300005585|Ga0049084_10199624	Not Available	683
3300007559|Ga0102828_1122553	Not Available	641
3300007561|Ga0102914_1143740	Not Available	738
3300007600|Ga0102920_1230644	Not Available	595
3300007636|Ga0102856_1010407	Not Available	1289
3300007649|Ga0102912_1023415	Not Available	1797
3300007649|Ga0102912_1188927	Not Available	591
3300007655|Ga0102825_1080108	Not Available	666
3300007661|Ga0102866_1011154	Not Available	2068
3300007718|Ga0102852_1017975	Not Available	1277
3300007861|Ga0105736_1023932	Not Available	1134
3300007861|Ga0105736_1137744	Not Available	551
3300007864|Ga0105749_1032887	Not Available	991
3300007953|Ga0105738_1041253	Not Available	727
3300007955|Ga0105740_1039392	Not Available	720
3300007955|Ga0105740_1045695	Not Available	682
3300007972|Ga0105745_1125111	Not Available	772
3300008115|Ga0114348_1038668	Not Available	1155
3300008115|Ga0114348_1052267	Not Available	975
3300008115|Ga0114348_1063406	Not Available	869
3300008263|Ga0114349_1083950	Not Available	1440
3300008263|Ga0114349_1092943	Not Available	1338
3300008263|Ga0114349_1154170	Not Available	907
3300008263|Ga0114349_1179625	Not Available	797
3300008263|Ga0114349_1197811	Not Available	730
3300008263|Ga0114349_1200503	Not Available	721
3300008263|Ga0114349_1202399	Not Available	714
3300008263|Ga0114349_1207250	Not Available	699
3300008263|Ga0114349_1221241	Not Available	655
3300008263|Ga0114349_1235923	Not Available	613
3300008263|Ga0114349_1269918	Not Available	529
3300008263|Ga0114349_1285878	Not Available	501
3300008265|Ga0114361_1037676	Not Available	1588
3300008265|Ga0114361_1052164	Not Available	1295
3300008265|Ga0114361_1053178	Not Available	1279
3300008265|Ga0114361_1054121	Not Available	1266
3300008265|Ga0114361_1054468	Not Available	1261
3300008265|Ga0114361_1068730	Not Available	1103
3300008265|Ga0114361_1072986	Not Available	1066
3300008265|Ga0114361_1104917	Not Available	876
3300008265|Ga0114361_1108377	Not Available	862
3300008265|Ga0114361_1140451	Not Available	753
3300008265|Ga0114361_1147856	Not Available	733
3300008265|Ga0114361_1150227	Not Available	727
3300008265|Ga0114361_1164307	Not Available	693
3300008265|Ga0114361_1169483	Not Available	682
3300008265|Ga0114361_1195977	Not Available	630
3300008265|Ga0114361_1203351	Not Available	617
3300008265|Ga0114361_1268183	Not Available	522
3300009056|Ga0102860_1193956	Not Available	581
3300020048|Ga0207193_1591614	Not Available	737
3300020048|Ga0207193_1774767	Not Available	616
3300020048|Ga0207193_1808468	Not Available	585
3300020502|Ga0208087_1018099	Not Available	958
3300020503|Ga0208363_1021297	Not Available	773
3300020505|Ga0208088_1021580	Not Available	839
3300021108|Ga0214162_1026550	Not Available	1012
3300021108|Ga0214162_1040427	Not Available	792
3300021140|Ga0214168_1030834	Not Available	1384
3300021325|Ga0210301_1300147	Not Available	519
3300024343|Ga0244777_10158046	Not Available	1462
3300024343|Ga0244777_10898617	Not Available	517
3300027204|Ga0208924_109039	Not Available	798
3300027254|Ga0208177_1024235	Not Available	1132
3300027256|Ga0208932_1051165	Not Available	738
3300027320|Ga0208923_1098231	Not Available	517
3300027757|Ga0208671_10066222	Not Available	1335
3300027793|Ga0209972_10259808	Not Available	780
3300027797|Ga0209107_10179927	Not Available	1058
3300027836|Ga0209230_10560190	Not Available	643
3300027885|Ga0209450_10155901	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Erysiphales → Erysiphaceae → Erysiphe	1582
3300032050|Ga0315906_11005948	Not Available	627
3300032092|Ga0315905_10880149	Not Available	768
3300032092|Ga0315905_11463053	Not Available	538
3300033978|Ga0334977_0208443	Not Available	980
3300033984|Ga0334989_0039035	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2585
3300033984|Ga0334989_0044526	Not Available	2425
3300033984|Ga0334989_0113613	Not Available	1504
3300033984|Ga0334989_0122616	Not Available	1444
3300033984|Ga0334989_0127961	Not Available	1411
3300033984|Ga0334989_0234565	Not Available	998
3300033984|Ga0334989_0417011	Not Available	686
3300034019|Ga0334998_0494402	Not Available	683
3300034022|Ga0335005_0195115	Not Available	1259
3300034022|Ga0335005_0277400	Not Available	1005
3300034022|Ga0335005_0422637	Not Available	759
3300034050|Ga0335023_0222741	Not Available	1047
3300034051|Ga0335024_0298685	Not Available	827
3300034064|Ga0335001_0435827	Not Available	700
3300034066|Ga0335019_0099868	Not Available	1945
3300034068|Ga0334990_0105710	Not Available	1526
3300034095|Ga0335022_0133542	Not Available	1551
3300034095|Ga0335022_0589926	Not Available	563
3300034105|Ga0335035_0113847	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1732
3300034107|Ga0335037_0054972	Not Available	2144
3300034167|Ga0335017_0103289	Not Available	1675
3300034168|Ga0335061_0318661	Not Available	811
3300034355|Ga0335039_0205334	Not Available	1086

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	76.19%
Marine	Environmental → Aquatic → Marine	23.81%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	56.19%
Lentic	Environmental → Aquatic → Freshwater → Lentic	17.14%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.14%
Coastal	Environmental → Aquatic → Marine → Coastal	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.86%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	53.33%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	17.14%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	8.57%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.67%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	5.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.90%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.95%

Habitat

Habitat	Taxonomy	Distribution
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	30.48%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	22.86%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	17.14%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	6.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	5.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.81%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	2.86%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.86%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.90%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.95%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.95%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002373	Freshwater microbial communities from Lake Mendota, WI - 29OCT2010 deep hole epilimnion	Environmental
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental
3300007655	Estuarine microbial communities from the Columbia River estuary - High salinity metaG S.579	Environmental
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental
3300007953	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_3um	Environmental
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental
3300020502	Freshwater microbial communities from Lake Mendota, WI - 29OCT2010 deep hole epilimnion (SPAdes)	Environmental
3300020503	Freshwater microbial communities from Lake Mendota, WI - 03MAY2011 deep hole epilimnion (SPAdes)	Environmental
3300020505	Freshwater microbial communities from Lake Mendota, WI - 02APR2012 deep hole epilimnion (SPAdes)	Environmental
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental
3300021325	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1033 (Metagenome Metatranscriptome)	Environmental
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental
3300027204	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 (SPAdes)	Environmental
3300027254	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 (SPAdes)	Environmental
3300027256	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3 (SPAdes)	Environmental
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental
3300034051	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13May2013-rr0097	Environmental
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29628_1027661	3300002373	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSGXAPLETPTLRDP
B570J29032_1090520552	3300002408	Freshwater	MAKDYNIKQNYCQPELITRGGMREGSVVEDAVERSSWG
JGI26437J51864_100131383	3300003910	Freshwater Lake Sediment	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLH
Ga0068877_103526382	3300005525	Freshwater Lake	MANVHSIPQHHIETPNKRCQMELLTRGTREGSVVEDAVERNSWGKSRCEQMCRFPITGGLHRTS
Ga0068877_104457092	3300005525	Freshwater Lake	LTMAQEYSVAQQNVGTRVGMREGRVVEDAVERNSRGKSRCEQMCRFPNT
Ga0068876_104266361	3300005527	Freshwater Lake	MANVHSIPQHHIETPNKRCQTELLRRGTSEGSVLEDAVERNSWGKSRCEQMCRFPITGGLHRT
Ga0049084_101996242	3300005585	Freshwater Lentic	MAQEYNIEGHYVKTPNNYRQPELITRGGIREGSVVEDAVVRTNSWGKSRCELKC
Ga0102828_11225531	3300007559	Estuarine	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCHSPNTGGLHRTS
Ga0102914_11437401	3300007561	Estuarine	MAQDNIEPNNYRQPELITRGGMHERSVLEDAVVRNSWGKSRCELMCRFPNTGGLHRTSGGAPLETPT
Ga0102920_12306441	3300007600	Estuarine	MANVHSIPQHHIETPNKRCQTELLRRGTREGSVLVNAVEPNSWGKSRCEQMCCFPITGGLHRTSG
Ga0102856_10104072	3300007636	Estuarine	MANVHSIPQHHIETPNKRCQKELLRHGTREGSVVEAAVERNSWGKSRCEQMCRFPITGG
Ga0102912_10234151	3300007649	Estuarine	MAQDVGTRNINNYCKPELISRGGIREGSVVEVAVERNSWGKSRCEQTCRFPNTGGLHRTSGDAP
Ga0102912_11889271	3300007649	Estuarine	MENNYCQPELITRGGVREGSVVEDAVERHSWGKSRCEQMCHFPNTGGLHRTS
Ga0102825_10801081	3300007655	Estuarine	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGNVVEDAVERNSWGKSRCEQMCCFPNT
Ga0102866_10111543	3300007661	Estuarine	MQINLTMENNNRPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRLRNTGGLHRTSGDAPLETPTLRDPVL
Ga0102852_10179752	3300007718	Estuarine	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQ
Ga0105736_10239322	3300007861	Estuary Water	MAQDVGTGTINNYCQPELITRGGIREGSVVEDAVERNSWGKSRCEQTCRFPNTGGLHRTSGDAPLETPTLR
Ga0105736_11377441	3300007861	Estuary Water	LDPDNNIAIDLTMAQDYNIKQQYVETQNNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEEMCRFPN
Ga0105749_10328871	3300007864	Estuary Water	MAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCHFPHTG
Ga0105738_10412532	3300007953	Estuary Water	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPNTG
Ga0105740_10393922	3300007955	Estuary Water	MAQEYNIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPNTG
Ga0105740_10456951	3300007955	Estuary Water	MAQDVGTGTINNYCQPELITRGGIREGSVVEDAVERNSWGKSRCEQTCRFPNTGGLHRTSGD
Ga0105745_11251111	3300007972	Estuary Water	MAHEHNIAQHHVETPNNYWQLELLIRGMRKGSVVEDAVERNSWGKSRCEQMCCFPNIGGLHRTSGDAPLETP
Ga0114348_10386682	3300008115	Freshwater, Plankton	MAQEYNIAQNNAETPDNYCQPELITRGGMREGSFVEDAVERISWVKSRC*
Ga0114348_10522671	3300008115	Freshwater, Plankton	MAQDYNIELNNYCHPELVTRGGMREGSVVEDAVERNSWGKSRCEQMC
Ga0114348_10634062	3300008115	Freshwater, Plankton	MAQDYNIELNNYCQPELVMRGGMREGSVVEDAAERNSWGKSRRELMCHFPNTGGLHRTSG
Ga0114349_10839502	3300008263	Freshwater, Plankton	MAQDYNIEQHYVETPNNYCQPELITCGGMREGSVVEDAVERNSGGKSRCEQMCRFPITGGLHRTSGDAPLETPTLRDPE*
Ga0114349_10929431	3300008263	Freshwater, Plankton	VTQDYNIELNNYCQPELVTRGGMREGSVVEDAVERNSWGKSRCEQMCRFPIPGGLHRTSGDAPLEAPTLR
Ga0114349_11541701	3300008263	Freshwater, Plankton	MAQDYNIEPNNCCQPELITRGGMREGSVVEDAVERNSWGKSRCELMCRF
Ga0114349_11796251	3300008263	Freshwater, Plankton	MAQDYNIKQHYVETPNNYCQPELIMRGGMREGSVVEDAVERNSWEKSRCEQMCRFPNT
Ga0114349_11978112	3300008263	Freshwater, Plankton	MAQDYNIKPNNYCQPEFITRGGMREGSVVEDAVERNSWEKSRCELT*
Ga0114349_12005032	3300008263	Freshwater, Plankton	MAQDYNIELNNYCQPELVMRGGMREGSVVEDAVERNSWGKSRCELMCRFPNTGGLHRTSGGAPLE
Ga0114349_12023991	3300008263	Freshwater, Plankton	MAQDYNIEPNNYCQPELITRGGMREGSVVEDAVERNSGGKSRCEQMCCFPITR
Ga0114349_12072501	3300008263	Freshwater, Plankton	MAQEYNTAQQNVGTPNNYRQPELITRGGMSEGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSGGAPLETPT*
Ga0114349_12212411	3300008263	Freshwater, Plankton	MAQDYNIEPNNYCQPDLITCGGMREGSVLEDAVERNSWEKSRCEQMCRFPNTGGLHRTSGGAPLE
Ga0114349_12359231	3300008263	Freshwater, Plankton	MAQEYNIAQNYTETPDNYCQPELITRGGMREGSVVEDTVERNSWGKSRCEQMC
Ga0114349_12699181	3300008263	Freshwater, Plankton	MAQEYNIAQQNVETPNNYCQPELITRGGMREGSVVEDTVERNSWGKSRCEQMC
Ga0114349_12858781	3300008263	Freshwater, Plankton	MAQEYNIAQQNVGTPNNYCQPELITRGGMHEGSVVEDTVERNSWGKSRCEQMCRFPNTGGLHCTSGGAPPETPILWDP
Ga0114361_10376762	3300008265	Freshwater, Plankton	MVEDYNIEQHYVETPNNYCQPELRTRGGMREGSVVEDAVECNSWGKSRCEQMHRFPIT*
Ga0114361_10521643	3300008265	Freshwater, Plankton	MAQDNIEPNNYCQPELIMRGGVHKRSVVEDAVERNSWGKSRCELMCRFPNTGGLHRTS
Ga0114361_10531782	3300008265	Freshwater, Plankton	MAQYYNIEQHYVETPNNYCQPELITRGGMREGSVVEDAVERNSWEKSRCEQMCRFPNTGGLHRTSGGAPLETPTL
Ga0114361_10541213	3300008265	Freshwater, Plankton	LDPDKNIVKNLMMAQDYNIEQHYVETLNNYCQPEFITCGGMREGSVVEDAVERNSWEKSRCEQMCRFPNTGGL
Ga0114361_10544682	3300008265	Freshwater, Plankton	MAQDNIEPNNYCQPELITRGGMHKRSVVEDAVERNSGGKSRCEQTCRFPNTGGLHR
Ga0114361_10687301	3300008265	Freshwater, Plankton	MAQDYNIKQHYVETPNNYCQPELIMRGGMREGSVVEDAVERNSWEKSRCEQMCRFPNTGGLHRTS
Ga0114361_10729861	3300008265	Freshwater, Plankton	MAQDYNIEPNNYCQPELLMRGGMHGGSVVEDAVERNSWGKSRCELMCRFPYTDTGRLH
Ga0114361_11049172	3300008265	Freshwater, Plankton	MAQEYNIAQQNVETPNNYCQPELITRGGMREGSVVEDTVERNSWGKSRCE
Ga0114361_11083771	3300008265	Freshwater, Plankton	MAQDYNIEQHYVETPNNYCQPEFITRGGMREGSVVEDAVERNSWEQSRCEQMCGFPNTGGLHHTSGGAPLETPTLRDPE
Ga0114361_11404511	3300008265	Freshwater, Plankton	LDPDNNIAINLAMAQDYNIEPNNYCQPELITRGGMREGSVVEDAVERNSWEKSRCEQMC
Ga0114361_11478561	3300008265	Freshwater, Plankton	MAQDYNIELNNFCQPELVMRGGMREGSVVEDAVERNSWGKSRCELMCRFPNTGGLHRTSGGAPLETPTLR
Ga0114361_11502271	3300008265	Freshwater, Plankton	MAQDYNIEPNNYCQPELITGGGMREGSVVEDAVERNSWEKSRCEQMCRFPNTGG
Ga0114361_11643071	3300008265	Freshwater, Plankton	MAQEYNIAQNNAESPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPNMGGLHRTSGDAPLE
Ga0114361_11694831	3300008265	Freshwater, Plankton	MAQECNIAQQNVGTPNNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGG
Ga0114361_11959771	3300008265	Freshwater, Plankton	MAQDYTIEQHYVETPNNYCQPELITRGGMREGSVVEDAVERNSWEKSRCEQMC
Ga0114361_12033511	3300008265	Freshwater, Plankton	MAQEYNIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMC
Ga0114361_12681832	3300008265	Freshwater, Plankton	MAQDYNIELNNYCHPELVTRGGMREGSVVEDAVERNSWG*
Ga0102860_11939561	3300009056	Estuarine	MAHEHNIAQHHVETPNNYWQLELLTCGMREGSVIEDAIEHN
Ga0207193_15916141	3300020048	Freshwater Lake Sediment	MAQDYNIAQHHVETPNIYCHLELITRGGMREGSVVEDAVERNSWGKSRCEQMCR
Ga0207193_17747671	3300020048	Freshwater Lake Sediment	MAHEYNIAQHHVETPNNYCHPELITRGMLREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHCTSGDAPLETPTL
Ga0207193_18084681	3300020048	Freshwater Lake Sediment	MAQEYNIAQYHNEAPNNYCQPEFITRGGMREGSVVEDAVERNSWGKTRCEQMCCFPNTGGLHRTSGDA
Ga0208087_10180991	3300020502	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKS
Ga0208363_10212972	3300020503	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCH
Ga0208088_10215801	3300020505	Freshwater	MAKDYNIKQNYCQPELITRGGMREGSVVEDAVERSSWGKSRC
Ga0208088_10269132	3300020505	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPNTGGLHRTSGGAPLETPTLRDPELITR
Ga0214162_10265501	3300021108	Freshwater	MAQDNIEPNNYRQPELITRGGMHERSVLEDAVVRNSWGKSRCELMCRFPNTGGLHRTSGGAPLET
Ga0214162_10404271	3300021108	Freshwater	MAQEYNIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPNMGGLHRTSGDAPLE
Ga0214168_10308342	3300021140	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSGGAPLETPT
Ga0210301_13001471	3300021325	Estuarine	MANVHNIPQDHIETPNKRCQMELLTRGAREGSVVEDAVERISWGKSRREQMCCFLIT
Ga0244777_101580462	3300024343	Estuarine	MAQDVGTGTINNYCQPELITRGGIREGIVVEDAVERNSWGKSRCEQTCRFPNTGGLHRTSGDAPLETPTLRDPEL
Ga0244777_108986171	3300024343	Estuarine	MENNNRPELITRGGMREGSVVEDAVERNSWGNSRSEQMCRLPNTGGLRRTSGDAPLETPTLR
Ga0208924_1090391	3300027204	Estuarine	MAQEYNIAQQDVGTGTINNYCQPELITRGGMREGSVIEDAVERNSRGKSRCEQTCRFPNTGGLHRTSGDAPLETP
Ga0208177_10242352	3300027254	Estuarine	MANVHSIPQHHIKTPNKRCQTELLRRGTREGSVVEDAVERNSWGKSRCEQMCRFPITGGLHRTSGDAPL
Ga0208932_10511651	3300027256	Estuarine	MANVHSIPQHHIETPNKRCQTELLRRGTREGSVLEDAVERNSWGKSRCEQMCRFPITGGLHRTSGD
Ga0208923_10982311	3300027320	Estuarine	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGL
Ga0208671_100662221	3300027757	Estuarine	MAQDNIEPNNYRQPELITHGGMHKRSVVEDAVERNSWGKSRCELMCRFPNTGELH
Ga0209972_102598082	3300027793	Freshwater Lake	MAQEYSVAQQNVGTRVGMREGRVVEDAVERNSRGKSRCEQMCRFPNTGGLHRTSGNAPLETHTLQ
Ga0209107_101799272	3300027797	Freshwater And Sediment	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNT
Ga0209230_105601901	3300027836	Freshwater And Sediment	MAQEYNIAQNNAESPNNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPN
Ga0209450_101559013	3300027885	Freshwater Lake Sediment	MIIFAIHYLTMAQEYSIAQNNTETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPN
Ga0315906_110059481	3300032050	Freshwater	MANVHSIPQHHIEMPNKRCQMELLTRGTREGSVVEDAVERNSWGKSRCEQMCRFPITGGLHRTSGDAPLETPTLQ
Ga0315905_108801492	3300032092	Freshwater	MANVHSIPQHHIETPNKRCQTELLRRGTREGSVLVNAVERNSWGKSRCEQMCRFP
Ga0315905_114630531	3300032092	Freshwater	MANVHSIPQHHIETPNKRCQTELLRRGTSEGSVLEDAVERNSWGKSRCEQMCRF
Ga0334977_0208443_795_980	3300033978	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGG
Ga0334989_0039035_6_146	3300033984	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVEHNSWGK
Ga0334989_0044526_2218_2424	3300033984	Freshwater	MAQEYNIAQHYVETPNNYCQPELITHGGMREGSVVEDAIERNSWGKSRCEQMCRFPNTGGLHRTSGDAP
Ga0334989_0113613_1351_1503	3300033984	Freshwater	MAKDYNIKQNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEEMCRFPNT
Ga0334989_0122616_2_223	3300033984	Freshwater	MAQEYNIAQNNAETPDDYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRSPTTGGLHRTSGGAPLETPT
Ga0334989_0127961_3_182	3300033984	Freshwater	MAQEYNIAQNNAETPNNYCQPELITRGGMREGSVVEDAVERNYWGKSRCEQMCRSPNTGG
Ga0334989_0234565_806_997	3300033984	Freshwater	MAQDYNIKQQYVETPNNYCQPELITCGGMREGSVVEDAVERNSWEKSRCEQMCRFPNMGGLHHT
Ga0334989_0417011_3_191	3300033984	Freshwater	MAQDYNTKQQYVETPNNYCQPELLTRGGMREGSVVEDAVERSSWGKSRCEEMCRFPNTGGLHH
Ga0334998_0494402_2_256	3300034019	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSGGAPLETPTLPDPELITR
Ga0335005_0195115_805_1050	3300034022	Freshwater	MTMAQEYNIAGHYVETPNNYCQPELITRGGIREGSVVEDAVERNSWGKSRCEQKCCFPNTGGLHRTSGGAPLETPTLWDPE
Ga0335005_0277400_835_1005	3300034022	Freshwater	MAQDYNIKQQYVETPNNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEEMCRFPN
Ga0335005_0422637_588_758	3300034022	Freshwater	MAQEYNIAGHYVETPNNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCHFPI
Ga0335023_0222741_838_1047	3300034050	Freshwater	MAQDYNIKQQYVETPNNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEEMCRFPNTGGLHHTSGGAPL
Ga0335024_0298685_628_825	3300034051	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCHSPNTGGLHRTSG
Ga0335001_0435827_2_220	3300034064	Freshwater	MAQEYNIEGHYVKTPNNYRQPELITRGGIRDGSVVEDAVVRTNSWGKSRCEQKCRFPNTGRLHRTSGGAPLET
Ga0335019_0099868_1694_1945	3300034066	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSGDAPLETPTLQNPVPVW
Ga0334990_0105710_3_161	3300034068	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMC
Ga0335022_0133542_1366_1551	3300034095	Freshwater	MAQEYSIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLH
Ga0335022_0589926_2_151	3300034095	Freshwater	MAKDYNIKQNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEEMCRFPN
Ga0335035_0113847_2_166	3300034105	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMC
Ga0335037_0054972_1941_2144	3300034107	Freshwater	MTMAQEYNIAQHHVETPNNYCQPELITRDGMREGSVVEDAVERNSWGKSRCEQMCRFPNTGGLHRTSG
Ga0335017_0103289_2_256	3300034167	Freshwater	MAQEYNIAQHCVETPNNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEQMCHFPNTGGLHHTSGGAPLETPTLWDPELITRGG
Ga0335061_0318661_3_191	3300034168	Freshwater	MAQEYNIAQHCVETPNNYCQPELITRGGMREGSVVEDAVERSSWGKSRCEQMCHFPNTGGLHH
Ga0335039_0205334_3_197	3300034355	Freshwater	MIILPYIYLTMAQEYNIAQNNAETPDNYCQPELITRGGMREGSVVEDAVERNSWGKSRCEQMCHS