Metagenome / Metatranscriptome Family F094923

Overview

Basic Information

• Family ID: F094923
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 105
• Average Sequence Length: 42 residues
• Representative Sequence: MSDHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA
• Number of Associated Samples: 65
• Number of Associated Scaffolds: 105

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 72.38 %
• % of genes near scaffold ends (potentially truncated): 14.29 %
• % of genes from short scaffolds (< 2000 bps): 71.43 %
• Associated GOLD sequencing projects: 54
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (60.952 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (53.333 % of family members)
• Environment Ontology (ENVO): Unclassified (85.714 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline) (92.381 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 52.11%
  β-sheet: 0.00%
  Coil/Unstructured: 47.89%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF04404	ERF	20.00
PF11753	DUF3310	6.67
PF07335	Glyco_hydro_75	5.71
PF08774	VRR_NUC	2.86
PF01242	PTPS	0.95
PF13489	Methyltransf_23	0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0720	6-pyruvoyl-tetrahydropterin synthase	Coenzyme transport and metabolism [H]	0.95

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
All Organisms	root	All Organisms	39.05 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
cellular organisms	root	All Organisms → cellular organisms	39.05 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.05 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	6.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	6.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.95 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	6.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.95 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	6.67 %
Alphaproteobacteria bacterium 65-37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37	0.95 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	6.67 %
Alphaproteobacteria bacterium 65-37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37	0.95 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.95 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	6.67 %
Alphaproteobacteria bacterium 65-37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37	0.95 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300005582|Ga0049080_10054706	All Organisms → cellular organisms → Bacteria	1376
3300005582|Ga0049080_10177281	Not Available	709
3300007734|Ga0104986_1273	All Organisms → cellular organisms → Bacteria	12950
3300009068|Ga0114973_10043476	All Organisms → cellular organisms → Bacteria	2674
3300009068|Ga0114973_10116142	All Organisms → cellular organisms → Bacteria	1509
3300009151|Ga0114962_10025259	All Organisms → cellular organisms → Bacteria	4140
3300009151|Ga0114962_10104857	Not Available	1755
3300009151|Ga0114962_10169495	All Organisms → cellular organisms → Bacteria	1298
3300009152|Ga0114980_10101681	All Organisms → cellular organisms → Bacteria	1718
3300009154|Ga0114963_10681606	Not Available	533
3300009155|Ga0114968_10012032	All Organisms → cellular organisms → Bacteria	6184
3300009155|Ga0114968_10031331	All Organisms → cellular organisms → Bacteria	3555
3300009155|Ga0114968_10144980	All Organisms → cellular organisms → Bacteria	1413
3300009155|Ga0114968_10252702	Not Available	1001
3300009155|Ga0114968_10442064	Not Available	705
3300009158|Ga0114977_10392229	Not Available	775
3300009159|Ga0114978_10038770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37	3356
3300009161|Ga0114966_10053822	All Organisms → cellular organisms → Bacteria	2847
3300009161|Ga0114966_10095836	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	2003
3300009161|Ga0114966_10130413	Not Available	1656
3300009163|Ga0114970_10028658	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	3719
3300009163|Ga0114970_10442014	Not Available	717
3300009163|Ga0114970_10706396	Not Available	535
3300009164|Ga0114975_10277966	Not Available	931
3300009181|Ga0114969_10218063	Not Available	1163
3300009181|Ga0114969_10238866	All Organisms → cellular organisms → Bacteria	1097
3300009182|Ga0114959_10075289	Not Available	1892
3300009185|Ga0114971_10408871	Not Available	769
3300009684|Ga0114958_10509729	Not Available	578
3300010160|Ga0114967_10360312	Not Available	733
3300010160|Ga0114967_10632034	Not Available	512
3300010885|Ga0133913_11904706	All Organisms → cellular organisms → Bacteria	1482
3300011010|Ga0139557_1012145	Not Available	1668
3300011011|Ga0139556_1029920	Not Available	798
3300011335|Ga0153698_1835	All Organisms → cellular organisms → Bacteria	11306
3300012012|Ga0153799_1010776	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	2021
3300012012|Ga0153799_1061900	Not Available	681
3300012768|Ga0138276_1239876	All Organisms → cellular organisms → Bacteria	16872
3300012779|Ga0138284_1099137	Not Available	1593
3300013372|Ga0177922_10183311	Not Available	679
3300014811|Ga0119960_1051558	Not Available	682
3300017701|Ga0181364_1043521	Not Available	712
3300017722|Ga0181347_1070722	All Organisms → cellular organisms → Bacteria	1029
3300017722|Ga0181347_1202431	Not Available	521
3300017723|Ga0181362_1008722	Not Available	2175
3300017723|Ga0181362_1070867	Not Available	708
3300017723|Ga0181362_1111294	Not Available	540
3300017736|Ga0181365_1079336	Not Available	805
3300017736|Ga0181365_1082209	Not Available	788
3300017736|Ga0181365_1104702	Not Available	683
3300017761|Ga0181356_1163728	Not Available	681
3300017774|Ga0181358_1204307	Not Available	644
3300017777|Ga0181357_1263928	Not Available	594
3300017778|Ga0181349_1160059	Not Available	803
3300017780|Ga0181346_1148198	Not Available	880
3300017785|Ga0181355_1130315	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	1025
3300017785|Ga0181355_1391993	Not Available	503
3300019784|Ga0181359_1059954	Not Available	1457
3300019784|Ga0181359_1135383	Not Available	864
3300019784|Ga0181359_1229321	Not Available	578
3300021516|Ga0194045_1168921	Not Available	542
3300021519|Ga0194048_10005042	All Organisms → cellular organisms → Bacteria	6330
3300021519|Ga0194048_10007126	All Organisms → cellular organisms → Bacteria	5247
3300021519|Ga0194048_10011698	All Organisms → cellular organisms → Bacteria	3977
3300021519|Ga0194048_10110102	Not Available	1055
3300021963|Ga0222712_10727247	Not Available	556
3300022407|Ga0181351_1062737	All Organisms → cellular organisms → Bacteria	1523
3300022407|Ga0181351_1148419	Not Available	846
3300022407|Ga0181351_1243292	Not Available	566
3300023184|Ga0214919_10072030	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	3112
3300024346|Ga0244775_10243006	Not Available	1502
3300025896|Ga0208916_10006703	All Organisms → cellular organisms → Bacteria	4513
3300027608|Ga0208974_1015262	All Organisms → cellular organisms → Bacteria	2433
3300027708|Ga0209188_1158479	Not Available	848
3300027733|Ga0209297_1022415	All Organisms → cellular organisms → Bacteria	2992
3300027734|Ga0209087_1209810	Not Available	742
3300027736|Ga0209190_1030320	All Organisms → cellular organisms → Bacteria	2907
3300027736|Ga0209190_1031135	All Organisms → cellular organisms → Bacteria	2859
3300027736|Ga0209190_1034852	Not Available	2668
3300027736|Ga0209190_1042332	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	2358
3300027736|Ga0209190_1069216	Not Available	1711
3300027736|Ga0209190_1075285	Not Available	1620
3300027736|Ga0209190_1320845	Not Available	584
3300027741|Ga0209085_1317069	Not Available	588
3300027747|Ga0209189_1165211	Not Available	936
3300027749|Ga0209084_1243772	Not Available	701
3300027749|Ga0209084_1283910	Not Available	630
3300027754|Ga0209596_1003720	All Organisms → cellular organisms → Bacteria	11872
3300027754|Ga0209596_1018932	All Organisms → cellular organisms → Bacteria	4186
3300027754|Ga0209596_1047697	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	2259
3300027754|Ga0209596_1141291	All Organisms → cellular organisms → Bacteria	1082
3300027754|Ga0209596_1148652	Not Available	1045
3300027763|Ga0209088_10212179	Not Available	822
3300027770|Ga0209086_10112466	Not Available	1373
3300027782|Ga0209500_10022726	All Organisms → cellular organisms → Bacteria	3627
3300027782|Ga0209500_10123974	Not Available	1248
3300027785|Ga0209246_10142923	Not Available	941
3300027808|Ga0209354_10094809	All Organisms → cellular organisms → Bacteria	1217
3300027963|Ga0209400_1005850	All Organisms → cellular organisms → Bacteria	8380
3300028393|Ga0304728_1290114	Not Available	533
3300031746|Ga0315293_10743530	Not Available	725
3300033233|Ga0334722_10354522	Not Available	1064
3300033996|Ga0334979_0471977	Not Available	683
3300034012|Ga0334986_0003425	All Organisms → cellular organisms → Bacteria	12559
3300034121|Ga0335058_0404316	All Organisms → cellular organisms → Bacteria	783

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	97.14%
Marine	Environmental → Aquatic → Marine	2.86%

Type

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	68.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	25.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.90%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.95%
Ice	Environmental → Aquatic → Freshwater → Ice	0.95%
Coastal	Environmental → Aquatic → Marine → Coastal	0.95%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	66.67%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	25.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.90%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.95%

Habitat

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	53.33%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	22.86%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.76%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.81%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	2.86%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.95%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.95%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater	0.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.95%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.95%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.95%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental
3300007734	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2015Jan	Environmental
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental
3300010885	northern Canada Lakes Co-assembly	Environmental
3300011010	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface Ice	Environmental
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental
3300012768	Freshwater microbial communities from Lake Montjoie, Canada - M_130710_M_mt (Metagenome Metatranscriptome)	Environmental
3300012779	Freshwater microbial communities from Lake Simoncouche, Canada - S_130206_E_mt (Metagenome Metatranscriptome)	Environmental
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental
3300017701	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.N	Environmental
3300017722	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.N	Environmental
3300017723	Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.N	Environmental
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental
3300021516	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L626-11m	Environmental
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental
3300024346	Whole water sample coassembly	Environmental
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental
3300027747	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)	Environmental
3300027749	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)	Environmental
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental
3300028393	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG (v2)	Environmental
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0049080_100547063	3300005582	Freshwater Lentic	MSDHDDLVARANRTMRAIRTMVRIILVSAILGLLWLLWRLCA*
Ga0049080_101772812	3300005582	Freshwater Lentic	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRICQ*
Ga0104986_127311	3300007734	Freshwater	MNNHDPDLVARANRTMSCIRTMVRIILVTGILGLLWLLWRLWL*
Ga0114973_100434763	3300009068	Freshwater Lake	MSDHDPDLVARANRTMRAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0114973_101161423	3300009068	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ*
Ga0114962_100252595	3300009151	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLGA*
Ga0114962_101048574	3300009151	Freshwater Lake	MDHDPDLVERANRTMSAIRTMIRIILTSAILGLLWLLWRMGA*
Ga0114962_101694951	3300009151	Freshwater Lake	DPDLVARATRTMSAIRTMIRIILVSAILGLLWLLWRLCQ*
Ga0114980_101016814	3300009152	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIILVSAILGLLWLLWRLCA*
Ga0114963_106816062	3300009154	Freshwater Lake	MDDDKDLVARSNRTMAAIRTMIRIIRVSAILGLLWLLWRLCA*
Ga0114968_1001203211	3300009155	Freshwater Lake	MSDHDPDLVARANRTMRAIRTMIRIVLTTAIIGLLWLLWRYWL*
Ga0114968_100313318	3300009155	Freshwater Lake	MSDHDDLVARANKTMRAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0114968_101449802	3300009155	Freshwater Lake	MDHDPDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ*
Ga0114968_102527023	3300009155	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIILTTAILGLLWLLWRLCA*
Ga0114968_104420642	3300009155	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIILISAILGLLWLLWRLL*
Ga0114977_103922292	3300009158	Freshwater Lake	MIDHDPDLVARANRTMSAIRTMVRIILVSAILGLLWLLWRLCS*
Ga0114978_100387703	3300009159	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIILTTAILGLLWLLWRICA*
Ga0114966_100538224	3300009161	Freshwater Lake	MSDNDPDLVARANRTMRAIRTMIRIVLTSAILGLLWLLWRLCE*
Ga0114966_100958363	3300009161	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0114966_101304133	3300009161	Freshwater Lake	MSDHDDLVARANRTMSAIRTMVRIILVSAILGLLWLLWRLCA*
Ga0114970_100286586	3300009163	Freshwater Lake	MDHDNDLVARANRTMAAIRTMIRIILTSAILGLLWLLWRLCA*
Ga0114970_104420142	3300009163	Freshwater Lake	MIDHDPDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0114970_107063962	3300009163	Freshwater Lake	MSDHDPDLVTRANRTMRAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0114975_102779662	3300009164	Freshwater Lake	MSDHDPDLVARANRTMSAIRTMIRIILTTAILGLLWLLWRICA*
Ga0114969_102180634	3300009181	Freshwater Lake	MIDHDPDLVARANRTMSAIRTMIRIILTTAILGLLWLLWRLCA*
Ga0114969_102388663	3300009181	Freshwater Lake	MDHDPDLVARANKTMSAIRTMIRIVLTSAIIGLLWLLWRLCA*
Ga0114959_100752895	3300009182	Freshwater Lake	MIDHDPDLVARATRTMSAIRTMIRIILVSAILGLLWLLWRLCQ*
Ga0114971_104088712	3300009185	Freshwater Lake	MIDHDPDLVARANRTMRAIRTMIRIVLTTAIIGLLWLLWRYWL*
Ga0114958_105097292	3300009684	Freshwater Lake	MIDHDPDLVTRANKTMSAIRTMIRIVLVTAILGLLWLLWRYWL*
Ga0114967_103603122	3300010160	Freshwater Lake	MSDHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA*
Ga0114967_106320341	3300010160	Freshwater Lake	DHDPDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ*
Ga0133913_119047063	3300010885	Freshwater Lake	MIEHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA*
Ga0139557_10121452	3300011010	Freshwater	MSHDPDLVARANRTMKAIRTMIRIILTTAILGLLWLLWRLCA*
Ga0139556_10299202	3300011011	Freshwater	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRLHA*
Ga0153698_18354	3300011335	Freshwater	MNNHDPDLVARANRTMSAIRTMVRIILTTAILGLLWLLWRLCA*
Ga0153799_10107764	3300012012	Freshwater	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRLCQ*
Ga0153799_10619002	3300012012	Freshwater	MSDHDPDLVARANRTMAAIRTMIRIILISAILGLLWLIWRLCQ*
Ga0138276_12398764	3300012768	Freshwater Lake	MSDRDDLVARANKTMRAIRTMIRIVLTSAILGLLWLLWRLCA*
Ga0138284_10991374	3300012779	Freshwater Lake	MIDHDPDLVALANRTMSAIRTMVRIILVSAILGLLWLLWRLCS*
Ga0177922_101833112	3300013372	Freshwater	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRICA*
Ga0119960_10515582	3300014811	Aquatic	MSHDPDIVARANRTMKAIRTMIRIILISAILGLLWLLWRLCA*
Ga0181364_10435212	3300017701	Freshwater Lake	MDADKDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCQ
Ga0181347_10707223	3300017722	Freshwater Lake	PEHSTLMDHDPDLVARANRTMAAIRTMIRIVLTSAILGLLWLLWRICQ
Ga0181347_12024311	3300017722	Freshwater Lake	MDADKDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRICQ
Ga0181362_10087224	3300017723	Freshwater Lake	MSNHDPDLVARANRTMSAIRTMIRIILTSAILGLLWLLWRLCA
Ga0181362_10708672	3300017723	Freshwater Lake	MDHDPDLVARANKTMSAIRTMIRIMLTTAILGLLWLLWRLCA
Ga0181362_11112942	3300017723	Freshwater Lake	MSDHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA
Ga0181365_10793362	3300017736	Freshwater Lake	MSDHDPDLVARANRTMAAIRTMVRIILTTAILGLLWLLWRICQ
Ga0181365_10822092	3300017736	Freshwater Lake	MIDHDPDLVARANRTMAAIRTMVRIILTTAILGLLWLIWRICQ
Ga0181365_11047022	3300017736	Freshwater Lake	MSDHDPDLVARANRTMAAIRTMIRIILISAILGLLWLIWRLCQ
Ga0181356_11637282	3300017761	Freshwater Lake	HSTLMDHDPDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRICQ
Ga0181358_12043072	3300017774	Freshwater Lake	YPEHEMSHDPDLVARANRTMKAIRTMIRIILTTAILGLLWLLWRLCA
Ga0181357_12639281	3300017777	Freshwater Lake	MSDYDPDLVARANRTMAAIRTMIRIILVSAILGLLWLLWRLHA
Ga0181349_11600592	3300017778	Freshwater Lake	MDHDPDLVARANRTMKAIRTMVRIILTTAILGLLWLLWRICQ
Ga0181346_11481983	3300017780	Freshwater Lake	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRLCA
Ga0181355_11303151	3300017785	Freshwater Lake	MMSDHDPDLVARANKTMSAIRTMVRIILISAILGLLWLLWRLCA
Ga0181355_13919932	3300017785	Freshwater Lake	MSDHDPDLVARANRTMSAIRTMVRIILTTAILGLLWLLWRLCA
Ga0181359_10599543	3300019784	Freshwater Lake	MSHDPDLVARANRTMAAIRTMIRIILVSAILGLLWLIWRLWA
Ga0181359_11353831	3300019784	Freshwater Lake	MDHDPDLVARANRTMSAIRTMVRIILTTAILGLLWLL
Ga0181359_12293212	3300019784	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIVLTSAILGLLWLLWRLCA
Ga0194045_11689212	3300021516	Anoxic Zone Freshwater	PKHNAMSDHDDLVARANKTMSAIRMMIRIVLTSAILGLMWLLWRLHA
Ga0194048_100050428	3300021519	Anoxic Zone Freshwater	MDADKDLVARANRTMAAIRTMIRIILVSAILGLLWLLWRICA
Ga0194048_1000712610	3300021519	Anoxic Zone Freshwater	MDADKDLVARANRTMAAIRTMIRIILTSAILGLLWLLWRLCQ
Ga0194048_100116985	3300021519	Anoxic Zone Freshwater	MDADKDLVARANRTMSAIRTMIRIILSTAILGLLWLLWRYWL
Ga0194048_101101022	3300021519	Anoxic Zone Freshwater	MSDHDDLVARANKTMSAIRTMIRIILTSAILGLLWLLWRLCA
Ga0222712_107272471	3300021963	Estuarine Water	DLVARANKTMSAIRTMIRIILVSAILGLLWLIWRICA
Ga0181351_10627371	3300022407	Freshwater Lake	MSDHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRICQ
Ga0181351_11484192	3300022407	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIILTTAILGLLWLLWRICQ
Ga0181351_12432922	3300022407	Freshwater Lake	MSDHDQDMVARANRTMKAIRTMVRIILTTAILGLLWLLWRICQ
Ga0214919_100720303	3300023184	Freshwater	MDHDPDLVARANKTMSAIRTMVRIILTSAILGLLWLLWRLCA
Ga0244775_102430064	3300024346	Estuarine	MIDHDPDLVARANRTMACIRTMIRIILVSAILGLLWLLWRVWL
Ga0208916_100067032	3300025896	Aqueous	MIDHDPDLVARANRTMKAIRTMIRIILTTAILGLLWLLWRLVA
Ga0208974_10152625	3300027608	Freshwater Lentic	MSDHDDLVARANRTMRAIRTMVRIILVSAILGLLWLLWRLCA
Ga0209188_11584792	3300027708	Freshwater Lake	MIDHDPDLVARATRTMSAIRTMIRIILVSAILGLLWLLWRLCQ
Ga0209297_10224156	3300027733	Freshwater Lake	MSDHDPDLVARANRTMSAIRTMIRIILTTAILGLLWLLWRICA
Ga0209087_12098102	3300027734	Freshwater Lake	MIDHDPDLVARANRTMSAIRTMVRIILVSAILGLLWLLWRLCS
Ga0209190_10303201	3300027736	Freshwater Lake	DLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ
Ga0209190_10311354	3300027736	Freshwater Lake	MIDHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA
Ga0209190_10348524	3300027736	Freshwater Lake	MDHDNDLVARANRTMAAIRTMIRIILTSAILGLLWLLWRLCA
Ga0209190_10423323	3300027736	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIILTTAILGLLWLLWRLCA
Ga0209190_10692161	3300027736	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ
Ga0209190_10752851	3300027736	Freshwater Lake	MDHDPDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCQ
Ga0209190_13208452	3300027736	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIILISAILGLLWLLWRLL
Ga0209085_13170692	3300027741	Freshwater Lake	MDDDKDLVARSNRTMAAIRTMIRIIRVSAILGLLWLLWRLCA
Ga0209189_11652111	3300027747	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRL
Ga0209084_12437721	3300027749	Freshwater Lake	DPDLVARATRTMSAIRTMIRIILVSAILGLLWLLWRLCQ
Ga0209084_12839102	3300027749	Freshwater Lake	MDHDPDLVERANRTMSAIRTMIRIILTSAILGLLWLLWRMGA
Ga0209596_100372016	3300027754	Freshwater Lake	MSDHDDLVARANKTMRAIRTMIRIVLTSAILGLLWLLWRLCA
Ga0209596_10189329	3300027754	Freshwater Lake	MIDHDPDLVARANRTMAAIRTMIRIVLTSAILGLLWLLWRLCA
Ga0209596_10476975	3300027754	Freshwater Lake	MSDHDDLVARANKTMSAIRTMIRIVLTSAILGLLWLLWRLCA
Ga0209596_11412913	3300027754	Freshwater Lake	MDHDPDLVARANKTMSAIRTMIRIVLTSAIIGLLWLLWRLCA
Ga0209596_11486522	3300027754	Freshwater Lake	MSDHDDLVARANRTMSAIRTMVRIILVSAILGLLWLLWRLCA
Ga0209088_102121792	3300027763	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIILTTAILGLLWLLWRICA
Ga0209086_101124661	3300027770	Freshwater Lake	MIEHDPDLVARANRTMAAIRTMIRIILTTAILGLLWLLWRLCA
Ga0209500_100227264	3300027782	Freshwater Lake	MSDHDDLVARANKTMSAIRTMVRIILVSAILGLLWLLWRLCA
Ga0209500_101239742	3300027782	Freshwater Lake	MSDHDPDLVARANRTMRAIRTMVRIILTTAILGLLWLLWRLCA
Ga0209246_101429232	3300027785	Freshwater Lake	MSDHDPDLVARANRTMAAIRMMIRIILVSAILGLLWLLWRLCA
Ga0209354_100948091	3300027808	Freshwater Lake	MDADKDLVARANRTMAAIRTMIRIILTSAILGLLWLIWRLCQ
Ga0209400_10058505	3300027963	Freshwater Lake	MSDHDPDLVARANRTMRAIRTMIRIVLTTAIIGLLWLLWRYWL
Ga0304728_12901142	3300028393	Freshwater Lake	MIDHDPDLVARATRTMSAIRTMIRIILVSAILGLLWLL
Ga0315293_107435301	3300031746	Sediment	MIDHDPDLVARANRTLACIRTMIRIILTTAILGLLWLLWRLCA
Ga0334722_103545223	3300033233	Sediment	MHDDDPDIVARANRLMSAIRTMIRIILTSAILGLLWLIWRICS
Ga0334979_0471977_553_681	3300033996	Freshwater	MSHDPDLVARANRTMSCIRTMIRIILVSAIIGLLWLIWRLWL
Ga0334986_0003425_3520_3648	3300034012	Freshwater	MSHDPDLVARANRTMAAIRTMIRVILTTAILSLLWLIWRLCA
Ga0335058_0404316_675_782	3300034121	Freshwater	VARANRTMAAIRTMIRVILTTAILSLLWLIWRLCA