NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F094882

Metagenome / Metatranscriptome Family F094882

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094882
Family Type Metagenome / Metatranscriptome
Number of Sequences 105
Average Sequence Length 53 residues
Representative Sequence MSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIG
Number of Associated Samples 74
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.86 %
% of genes near scaffold ends (potentially truncated) 12.38 %
% of genes from short scaffolds (< 2000 bps) 69.52 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (66.667 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(50.476 % of family members)
Environment Ontology (ENVO) Unclassified
(89.524 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(96.190 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 69.81%    β-sheet: 0.00%    Coil/Unstructured: 30.19%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF13609Porin_4 17.14
PF04055Radical_SAM 3.81
PF02310B12-binding 3.81
PF14743DNA_ligase_OB_2 1.90
PF00462Glutaredoxin 1.90
PF05488PAAR_motif 0.95
PF10504DUF2452 0.95
PF02867Ribonuc_red_lgC 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 0.95
COG4104Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretionIntracellular trafficking, secretion, and vesicular transport [U] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A66.67 %
All OrganismsrootAll Organisms33.33 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003490|JGI25926J51410_1040971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae829Open in IMG/M
3300003491|JGI25924J51412_1010397All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300003493|JGI25923J51411_1077989Not Available567Open in IMG/M
3300004693|Ga0065167_1052735Not Available673Open in IMG/M
3300004772|Ga0007791_10198210Not Available574Open in IMG/M
3300004774|Ga0007794_10162231Not Available668Open in IMG/M
3300004774|Ga0007794_10265342Not Available509Open in IMG/M
3300004775|Ga0007798_10149495Not Available534Open in IMG/M
3300004776|Ga0007800_10126477Not Available625Open in IMG/M
3300004790|Ga0007758_11333511All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1484Open in IMG/M
3300004805|Ga0007792_10178672Not Available653Open in IMG/M
3300005517|Ga0070374_10388043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae703Open in IMG/M
3300008267|Ga0114364_1022467All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2595Open in IMG/M
3300008996|Ga0102831_1215256Not Available635Open in IMG/M
3300009068|Ga0114973_10002265All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage14082Open in IMG/M
3300009068|Ga0114973_10044540All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium2636Open in IMG/M
3300009068|Ga0114973_10118238All Organisms → Viruses → Predicted Viral1494Open in IMG/M
3300009151|Ga0114962_10026612All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4014Open in IMG/M
3300009151|Ga0114962_10206498Not Available1144Open in IMG/M
3300009152|Ga0114980_10057131All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2358Open in IMG/M
3300009154|Ga0114963_10025964All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium3883Open in IMG/M
3300009154|Ga0114963_10237478Not Available1039Open in IMG/M
3300009154|Ga0114963_10738747Not Available508Open in IMG/M
3300009158|Ga0114977_10006061All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes7679Open in IMG/M
3300009158|Ga0114977_10241228Not Available1046Open in IMG/M
3300009158|Ga0114977_10487285Not Available676Open in IMG/M
3300009159|Ga0114978_10044233All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium3106Open in IMG/M
3300009159|Ga0114978_10601031Not Available636Open in IMG/M
3300009160|Ga0114981_10648456Not Available560Open in IMG/M
3300009163|Ga0114970_10508442Not Available657Open in IMG/M
3300009164|Ga0114975_10009189All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6201Open in IMG/M
3300009164|Ga0114975_10161454Not Available1278Open in IMG/M
3300009164|Ga0114975_10547744Not Available620Open in IMG/M
3300009180|Ga0114979_10762945Not Available544Open in IMG/M
3300009181|Ga0114969_10074130All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium2226Open in IMG/M
3300009182|Ga0114959_10388812Not Available684Open in IMG/M
3300009183|Ga0114974_10451745Not Available728Open in IMG/M
3300009684|Ga0114958_10323480Not Available753Open in IMG/M
3300010157|Ga0114964_10193612Not Available978Open in IMG/M
3300010158|Ga0114960_10596241Not Available523Open in IMG/M
3300010160|Ga0114967_10072741All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2073Open in IMG/M
3300010160|Ga0114967_10354709All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium741Open in IMG/M
3300010334|Ga0136644_10326819Not Available883Open in IMG/M
3300010885|Ga0133913_10163444All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → unclassified Legionellales → Legionellales bacterium5950Open in IMG/M
3300010885|Ga0133913_10488520Not Available3246Open in IMG/M
3300010885|Ga0133913_12777103Not Available1180Open in IMG/M
3300011010|Ga0139557_1001425All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5520Open in IMG/M
3300011335|Ga0153698_1006All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage88253Open in IMG/M
3300013006|Ga0164294_10008775All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8569Open in IMG/M
3300013006|Ga0164294_10022129All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5170Open in IMG/M
3300013006|Ga0164294_10571115Not Available768Open in IMG/M
3300013014|Ga0164295_10021277All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5002Open in IMG/M
3300013295|Ga0170791_12923835Not Available626Open in IMG/M
3300015050|Ga0181338_1029060Not Available844Open in IMG/M
3300017701|Ga0181364_1062664Not Available574Open in IMG/M
3300017723|Ga0181362_1101491Not Available571Open in IMG/M
3300017754|Ga0181344_1039577Not Available1424Open in IMG/M
3300017761|Ga0181356_1195871Not Available601Open in IMG/M
3300017761|Ga0181356_1211440Not Available569Open in IMG/M
3300017774|Ga0181358_1038530Not Available1844Open in IMG/M
3300017774|Ga0181358_1199517Not Available655Open in IMG/M
3300017777|Ga0181357_1294060Not Available553Open in IMG/M
3300019093|Ga0187843_10043504Not Available2183Open in IMG/M
3300019783|Ga0181361_121968Not Available507Open in IMG/M
3300019784|Ga0181359_1008785Not Available3504Open in IMG/M
3300019784|Ga0181359_1025207Not Available2273Open in IMG/M
3300019784|Ga0181359_1044287Not Available1722Open in IMG/M
3300022190|Ga0181354_1082878Not Available1056Open in IMG/M
3300022190|Ga0181354_1250103Not Available505Open in IMG/M
3300022407|Ga0181351_1132419Not Available920Open in IMG/M
3300022752|Ga0214917_10143456Not Available1279Open in IMG/M
3300023174|Ga0214921_10356459Not Available775Open in IMG/M
3300023179|Ga0214923_10496804Not Available601Open in IMG/M
3300023184|Ga0214919_10005559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage17792Open in IMG/M
3300023184|Ga0214919_10338424Not Available1012Open in IMG/M
3300023184|Ga0214919_10385092All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium918Open in IMG/M
3300024346|Ga0244775_10829721Not Available738Open in IMG/M
3300025476|Ga0208495_1068079Not Available635Open in IMG/M
3300025578|Ga0208864_1094709Not Available708Open in IMG/M
3300025896|Ga0208916_10442777Not Available566Open in IMG/M
3300027688|Ga0209553_1110975Not Available977Open in IMG/M
3300027708|Ga0209188_1010158All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5390Open in IMG/M
3300027708|Ga0209188_1040585All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium2138Open in IMG/M
3300027712|Ga0209499_1118100All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium992Open in IMG/M
3300027733|Ga0209297_1001483All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage13637Open in IMG/M
3300027734|Ga0209087_1034694Not Available2390Open in IMG/M
3300027734|Ga0209087_1066196All Organisms → Viruses → Predicted Viral1605Open in IMG/M
3300027734|Ga0209087_1259642Not Available637Open in IMG/M
3300027736|Ga0209190_1216406Not Available779Open in IMG/M
3300027741|Ga0209085_1044917All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2056Open in IMG/M
3300027747|Ga0209189_1247104Not Available714Open in IMG/M
3300027749|Ga0209084_1280313Not Available636Open in IMG/M
3300027759|Ga0209296_1236679Not Available759Open in IMG/M
3300027763|Ga0209088_10007611All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage6011Open in IMG/M
3300027763|Ga0209088_10024137Not Available3115Open in IMG/M
3300027782|Ga0209500_10029850All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium3083Open in IMG/M
3300027808|Ga0209354_10146613Not Available963Open in IMG/M
3300027808|Ga0209354_10228363Not Available750Open in IMG/M
3300027969|Ga0209191_1019404All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3395Open in IMG/M
3300027969|Ga0209191_1096340All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium1268Open in IMG/M
3300027969|Ga0209191_1135514Not Available1017Open in IMG/M
3300027971|Ga0209401_1028750Not Available2715Open in IMG/M
3300027971|Ga0209401_1177736Not Available810Open in IMG/M
3300027973|Ga0209298_10147993Not Available990Open in IMG/M
3300032092|Ga0315905_11145444Not Available640Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake50.48%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake22.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.52%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater8.57%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.90%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Freshwater0.95%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.95%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.95%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.95%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003490Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003491Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003493Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300004693Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA7.5M (version 2)EnvironmentalOpen in IMG/M
3300004772Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5MEnvironmentalOpen in IMG/M
3300004774Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5MEnvironmentalOpen in IMG/M
3300004775Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17MEnvironmentalOpen in IMG/M
3300004776Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14MEnvironmentalOpen in IMG/M
3300004790Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004805Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6MEnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009068Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaGEnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009152Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaGEnvironmentalOpen in IMG/M
3300009154Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009160Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaGEnvironmentalOpen in IMG/M
3300009163Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009182Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009684Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaGEnvironmentalOpen in IMG/M
3300010157Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaGEnvironmentalOpen in IMG/M
3300010158Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaGEnvironmentalOpen in IMG/M
3300010160Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaGEnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011010Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Surface IceEnvironmentalOpen in IMG/M
3300011335Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - GumanEnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300013014Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaGEnvironmentalOpen in IMG/M
3300013295northern Canada Lakes metatranscriptome co-assemblyEnvironmentalOpen in IMG/M
3300015050Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017701Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017754Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017777Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.NEnvironmentalOpen in IMG/M
3300019093Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - SP09_SKY_43EnvironmentalOpen in IMG/M
3300019783Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025476Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA14M (SPAdes)EnvironmentalOpen in IMG/M
3300025578Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)EnvironmentalOpen in IMG/M
3300025896Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027688Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027712Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027733Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027736Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027741Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027747Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027759Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027763Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027808Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027971Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027973Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25926J51410_104097113300003490Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIG*
JGI25924J51412_101039723300003491Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEID*
JGI25923J51411_107798923300003493Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIG*PELFKLL*
Ga0065167_105273523300004693FreshwaterMSDLYMEVETMLNEGEHPSRIARRLGVPLSMVYDVLESMPADDEIATRVGEIG*PLLFKLL*
Ga0007791_1019821013300004772FreshwaterMSDLYMEVETMLNEGEHPARIARRLGIPLSTVYDVLESMPADDEIATGVGEIG*
Ga0007794_1016223123300004774FreshwaterMLAEGEHPARIARRLGIPLSTVYDVLESMPAEDEIVTSVGEIG*
Ga0007794_1026534223300004774FreshwaterMSKMSDLYMEVETMLNEGEHPARIARRLGIPLSTVYDVLESMPADDEIATGVGEIG*
Ga0007798_1014949513300004775FreshwaterMSKMSDLYMEVEQMLAEGEHPARIARRLGIPLSTVYDVLESMPADDEIATGVGEIG*
Ga0007800_1012647723300004776FreshwaterMSKMSDLYMEVETMLNEGEHPSRIARRLGVPLGMVYDVLESMPAEDEIATGVGEIG*PLLPEML*
Ga0007758_1133351113300004790Freshwater LakeMSDLYMEVEQMLAEGENPSLIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG*
Ga0007792_1017867233300004805FreshwaterYMEVETMLNEGEHPARIARRLGIPLSTVYDVLESMPADDEIATGVGEIG*
Ga0070374_1038804333300005517Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGE
Ga0114364_102246773300008267Freshwater, PlanktonMEVEQMLAEGENPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG*
Ga0102831_121525623300008996EstuarineMEVEQMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIG*
Ga0114973_1000226573300009068Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGLPLGMVYDVLESMPAEDEVDQ*
Ga0114973_1004454033300009068Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPPSMVYDVLESMPAEDEIATGVGEIG*
Ga0114973_1011823833300009068Freshwater LakeMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG*
Ga0114962_1002661233300009151Freshwater LakeMSKMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATGVGEIG*
Ga0114962_1020649823300009151Freshwater LakeMSKMSDLYMEVEIMLNEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIG*
Ga0114980_1005713113300009152Freshwater LakeMSKMSDLYMEVELMLAEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEIGEIG*
Ga0114963_1002596433300009154Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGIPLSMVYDVLESMPAHDEIATGVGEIG*
Ga0114963_1023747833300009154Freshwater LakeMSKMSDLYMEVETMLNEGEHPARIARRLGVPLGMVYDVLESMPADDEIATEVGEIG*
Ga0114963_1073874713300009154Freshwater LakeMSKMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATG
Ga0114977_1000606133300009158Freshwater LakeMSKMSDLYMEIELMLEEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG*
Ga0114977_1024122823300009158Freshwater LakeMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATGVCEIG*
Ga0114977_1048728513300009158Freshwater LakeMSKMSDLYMEVETMLNEGEHPARIARRLGVPLSMVYDVLESMPAEDEIATQVGEIG*
Ga0114978_1004423333300009159Freshwater LakeMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGKIG*
Ga0114978_1060103113300009159Freshwater LakeMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATGVGEIG
Ga0114981_1064845623300009160Freshwater LakeMSKMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGKIG*
Ga0114970_1050844233300009163Freshwater LakeMEVELMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATRVGEIG*
Ga0114975_1000918933300009164Freshwater LakeMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATGVGEIG*
Ga0114975_1016145413300009164Freshwater LakeMSKMSDLYMEVELMLSEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATQVGEIG*
Ga0114975_1054774423300009164Freshwater LakeMSKMSDLYMEVEQMLQEGEHPARIARRLGIPLSMVYDVLESMPAEEEIATEVGEIG*
Ga0114979_1076294513300009180Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATGVGEIG*
Ga0114969_1007413023300009181Freshwater LakeMSKMSDLYMEVELMLEEGEHPARIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG*
Ga0114959_1038881213300009182Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVG
Ga0114974_1045174533300009183Freshwater LakeMSKMSDLYMEVETMLNEGDHPSRIARRLGIPLGMVYDVLESMPADDEIATGVGEIG*
Ga0114958_1032348033300009684Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIG*
Ga0114964_1019361223300010157Freshwater LakeMEVETMLAEGEHPSRIARRLGVPLGMVYDVLESMPEDDEIATEVGKIG*
Ga0114960_1059624123300010158Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPAEDEIATGVGKIG*
Ga0114967_1007274123300010160Freshwater LakeMEVEQMLAEGEHPSRIARRLGLPLGMVYDVLESMPAEDEVDQ*
Ga0114967_1035470913300010160Freshwater LakePARIARRLGIPLSMVYDVLESMPAHDEIATGVGKIG*
Ga0136644_1032681923300010334Freshwater LakeMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATGVGKIG*
Ga0133913_1016344413300010885Freshwater LakeMEVELMLEEGEHPARIARRLGIPLSMVYDVLESMPAHDEIATGVGKIG*
Ga0133913_1048852023300010885Freshwater LakeMEVEQMLQEGEHPARIARRLGIPLSMVYDVLESMPAEEEIATEVGEIG*
Ga0133913_1277710323300010885Freshwater LakeMSKMSDLYMEVENMLAEGEHPARIARRLGIPLGMVYDVLESMPAHDEIATGVGEIG*
Ga0139557_100142523300011010FreshwaterMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEIG*
Ga0153698_1006213300011335FreshwaterMEVEQMLAEGEHPARIARRLGIPLSTVYDVLESMPEEDEIATGVGEFG*
Ga0164294_10008775113300013006FreshwaterMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVGMVYDVLESMPAEDEIATEVGEIG*
Ga0164294_1002212953300013006FreshwaterMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG*
Ga0164294_1057111533300013006FreshwaterMSKMSDLYMEVELMLEEGEHPARIARRLGIPVSMVYDVLESMPAEDEIATGVGEIG*
Ga0164295_1002127733300013014FreshwaterMEVEQMLAEGEHPSRIARRLGIPVGMVYDVLESMPAEDEIATEVGEIG*
Ga0170791_1292383513300013295FreshwaterMSKMSDLYMEVETMLNEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIG*
Ga0181338_102906033300015050Freshwater LakeMEVEQMLAEGENPSRIARRLGIPLNMVYDVLESMPADDEIATEVGEIG*
Ga0181364_106266413300017701Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEIDXPVLFKLL
Ga0181362_110149113300017723Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADNEI
Ga0181344_103957723300017754Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATGVGEIG
Ga0181356_119587113300017761Freshwater LakeMSKMSDLYMEVEQMLAEGEHPARIARRLGIPLSMVYDVLESMPADDEIATGFGEIGXPELLELL
Ga0181356_121144013300017761Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIGXPVLLKLL
Ga0181358_103853023300017774Freshwater LakeMSDLYMEVEQMLAEGENPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG
Ga0181358_119951713300017774Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIGXPVLLKLL
Ga0181357_129406023300017777Freshwater LakeMSDLYMEVEQMLQEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIGXPVFSEL
Ga0187843_1004350433300019093FreshwaterMSDLYMEVEQMLAEGEHPARIARRLGIPLSMVYDVLESMPADDEIATEVGEIG
Ga0181361_12196813300019783Freshwater LakeMSKMSDLYMEVEQMLAEGENPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIGXPVLLKLL
Ga0181359_100878543300019784Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIG
Ga0181359_102520733300019784Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG
Ga0181359_104428723300019784Freshwater LakeMSDLYMEVEQMLQEGEHPSRIARRLGIPLSMVYDVLESMPADDEIATEVGEIG
Ga0181354_108287833300022190Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG
Ga0181354_125010313300022190Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGKIDXPVLFKLL
Ga0181351_113241923300022407Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEID
Ga0214917_1014345623300022752FreshwaterMSDLYMEVETMLAEGEHPARIARRLDVPLSMVYDVLESMPAEDEIATEVGEIG
Ga0214921_1035645933300023174FreshwaterMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPAEDEIATGVGEIG
Ga0214923_1049680413300023179FreshwaterMSKMSDLYMEVELMLAEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG
Ga0214919_10005559153300023184FreshwaterMSDLYMEVELMLAEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEVGKIG
Ga0214919_1033842423300023184FreshwaterMSDLYMEVETMLNEGEHPARIARRLGVPLSMVYDVLESMPAEDEIATGVGEIG
Ga0214919_1038509223300023184FreshwaterMSDLYMEVETMLAEGEHPARIARRLGIPLSTVYDVLESMPAEDEIATQVGEIG
Ga0244775_1082972113300024346EstuarineMSDLYMEVEQMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIG
Ga0208495_106807913300025476FreshwaterMSDLYMEVEQMLAEGEHPARIARRLGIPLSTVYDVLESMPEDDEIATQVGEIG
Ga0208864_109470923300025578FreshwaterMSDLYMEVETMLNEGEHPARIARRLGIPLSTVYDVLESMPEEDEIATRVGEIG
Ga0208916_1044277723300025896AqueousMSDLYMEVELMLAEGEHPTRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG
Ga0209553_111097523300027688Freshwater LakeMSKMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEIG
Ga0209188_101015833300027708Freshwater LakeMSDLYMEVETMLNEGEHPARIARRLGVPLGMVYDVLESMPADDEIATEVGEIG
Ga0209188_104058553300027708Freshwater LakeMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATGVGEIG
Ga0209499_111810033300027712Freshwater LakeMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATGVGEIG
Ga0209297_1001483103300027733Freshwater LakeMSDLYMEIELMLEEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG
Ga0209087_103469423300027734Freshwater LakeMSDLYMEVETMLNEGEHPARIARRLGVPLSMVYDVLESMPAEDEIATQVGEIG
Ga0209087_106619623300027734Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATGVGEIG
Ga0209087_125964223300027734Freshwater LakeMSKMSDLYMEVELMLSEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATQVGEIGXPLLLELL
Ga0209190_121640623300027736Freshwater LakeMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATRVGEIG
Ga0209085_104491763300027741Freshwater LakeMSKMSDLYMEVETMLNEGEHPARIARRLGVPLGMVYDVLESMPADDEIATEVGEIG
Ga0209189_124710423300027747Freshwater LakeMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATRVGEIG
Ga0209084_128031313300027749Freshwater LakeMSKMSDLYMEVETMLAEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGEIGXPLLLELL
Ga0209296_123667933300027759Freshwater LakeAEGEHPSRIARRLGIPLSMVYDVLESMPAEDEIATGVGKIG
Ga0209088_1000761123300027763Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPAEDEIATEVGEIG
Ga0209088_1002413733300027763Freshwater LakeMSDLYMEVELMLAEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEIGEIG
Ga0209500_1002985033300027782Freshwater LakeMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGKIG
Ga0209354_1014661313300027808Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEIG
Ga0209354_1022836333300027808Freshwater LakeEGEHPSRIARRLGIPVSMVYDVLESMPADDEIATEVGEIG
Ga0209191_101940413300027969Freshwater LakeMSDLYMEVETMLHEGEHPARIARRLGVPLSMVYDVLESMPADDEIATEVGKI
Ga0209191_109634023300027969Freshwater LakeMSDLYMEVELMLSEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATQVGEIG
Ga0209191_113551423300027969Freshwater LakeMSDLYMEVEQMLQEGEHPARIARRLGIPLSMVYDVLESMPAEEEIATEVGEIG
Ga0209401_102875033300027971Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPPSMVYDVLESMPAEDEIATGVGEIG
Ga0209401_117773613300027971Freshwater LakeMSDLYMEVEQMLAEGEHPSRIARRLGIPLSMVYDVLESMPAEDE
Ga0209298_1014799333300027973Freshwater LakeMSKMSDLYMEVELMLAEGENPVRIARRLGIPLSMVYDVLESMPAEDEIATEIGEIG
Ga0315905_1114544413300032092FreshwaterVEQMLAEGENPSRIARRLGIPLSMVYDVLESMPAEDEIATEVGEIG


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