Metagenome / Metatranscriptome Family F094845

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094845
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	114 residues
Representative Sequence	MAMPTGDSPQKVEEYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFMLLTVVLTGFAVALIVGHLVWGQKF
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.58 %
% of genes near scaffold ends (potentially truncated)	32.38 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.095 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (40.952 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.095 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.02% β-sheet: 1.36% Coil/Unstructured: 47.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13442	Cytochrome_CBB3	10.48
PF00115	COX1	5.71
PF08530	PepX_C	1.90
PF08395	7tm_7	1.90
PF00293	NUDIX	0.95
PF01425	Amidase	0.95
PF13407	Peripla_BP_4	0.95
PF13567	DUF4131	0.95
PF00119	ATP-synt_A	0.95
PF07969	Amidohydro_3	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	1.90
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.95
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.10 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.24 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	95.24 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.86 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.86 %
Unclassified	root	N/A	1.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.86 %
Unclassified	root	N/A	1.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102876275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300000956\|JGI10216J12902_103954404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M
3300000956\|JGI10216J12902_121631832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300000956\|JGI10216J12902_123544689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300003987\|Ga0055471_10017452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1672	Open in IMG/M
3300004006\|Ga0055453_10002650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3583	Open in IMG/M
3300004156\|Ga0062589_100764905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300005093\|Ga0062594_102039724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300005177\|Ga0066690_10357676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300005186\|Ga0066676_10654162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300005564\|Ga0070664_102176932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300006046\|Ga0066652_101396957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300009012\|Ga0066710_100037392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5794	Open in IMG/M
3300009012\|Ga0066710_102836352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300009137\|Ga0066709_100942616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1260	Open in IMG/M
3300009137\|Ga0066709_101134653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1150	Open in IMG/M
3300009137\|Ga0066709_101387773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300009801\|Ga0105056_1019458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300009811\|Ga0105084_1024586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300010147\|Ga0126319_1098595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2517	Open in IMG/M
3300010333\|Ga0134080_10494761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300011000\|Ga0138513_100034039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300012198\|Ga0137364_11144910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300012204\|Ga0137374_10380418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300012208\|Ga0137376_10341815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300012208\|Ga0137376_10863459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300012350\|Ga0137372_10660598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300012356\|Ga0137371_10085006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2457	Open in IMG/M
3300014314\|Ga0075316_1127496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300017997\|Ga0184610_1187522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300018027\|Ga0184605_10002939	All Organisms → cellular organisms → Bacteria	5825	Open in IMG/M
3300018027\|Ga0184605_10006414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4307	Open in IMG/M
3300018027\|Ga0184605_10023088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2516	Open in IMG/M
3300018028\|Ga0184608_10008934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3361	Open in IMG/M
3300018028\|Ga0184608_10111406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1152	Open in IMG/M
3300018052\|Ga0184638_1279130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300018054\|Ga0184621_10120244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300018061\|Ga0184619_10001731	All Organisms → cellular organisms → Bacteria	7774	Open in IMG/M
3300018061\|Ga0184619_10067518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1576	Open in IMG/M
3300018061\|Ga0184619_10237274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300018071\|Ga0184618_10117217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1061	Open in IMG/M
3300018076\|Ga0184609_10363585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300018078\|Ga0184612_10021061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3351	Open in IMG/M
3300018433\|Ga0066667_10361257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300019259\|Ga0184646_1493594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1681	Open in IMG/M
3300019269\|Ga0184644_1085306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300019867\|Ga0193704_1080768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300021073\|Ga0210378_10009139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4257	Open in IMG/M
3300021078\|Ga0210381_10218583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300021951\|Ga0222624_1047416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300022534\|Ga0224452_1022990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300022694\|Ga0222623_10002436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6370	Open in IMG/M
3300022756\|Ga0222622_10162139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300025795\|Ga0210114_1065156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300027006\|Ga0209896_1012977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300027056\|Ga0209879_1081699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300027163\|Ga0209878_1008105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1503	Open in IMG/M
3300027163\|Ga0209878_1032111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300027952\|Ga0209889_1048719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300028705\|Ga0307276_10022265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1253	Open in IMG/M
3300028711\|Ga0307293_10009957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2640	Open in IMG/M
3300028711\|Ga0307293_10038983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1456	Open in IMG/M
3300028715\|Ga0307313_10003240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3714	Open in IMG/M
3300028718\|Ga0307307_10007582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2833	Open in IMG/M
3300028719\|Ga0307301_10070518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300028720\|Ga0307317_10002097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6055	Open in IMG/M
3300028722\|Ga0307319_10244357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300028755\|Ga0307316_10160177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	804	Open in IMG/M
3300028755\|Ga0307316_10362429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300028771\|Ga0307320_10179022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300028771\|Ga0307320_10438495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300028778\|Ga0307288_10017901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2242	Open in IMG/M
3300028784\|Ga0307282_10436148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300028793\|Ga0307299_10008754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3557	Open in IMG/M
3300028793\|Ga0307299_10126870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300028819\|Ga0307296_10008700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5313	Open in IMG/M
3300028875\|Ga0307289_10132713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300028878\|Ga0307278_10450841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300028880\|Ga0307300_10272669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300028881\|Ga0307277_10000079	All Organisms → cellular organisms → Bacteria	28832	Open in IMG/M
3300028884\|Ga0307308_10001393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9642	Open in IMG/M
3300030904\|Ga0308198_1068021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300030905\|Ga0308200_1119546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300030989\|Ga0308196_1004724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300030993\|Ga0308190_1026569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300030993\|Ga0308190_1028601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300030993\|Ga0308190_1158377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300031058\|Ga0308189_10332139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300031058\|Ga0308189_10371842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	582	Open in IMG/M
3300031082\|Ga0308192_1076495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300031093\|Ga0308197_10003558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2436	Open in IMG/M
3300031093\|Ga0308197_10018296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300031093\|Ga0308197_10094516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300031093\|Ga0308197_10218355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300031093\|Ga0308197_10482724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300031094\|Ga0308199_1037887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300031094\|Ga0308199_1119995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300031114\|Ga0308187_10081534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300031114\|Ga0308187_10086542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300031114\|Ga0308187_10446942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300031123\|Ga0308195_1053041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300031938\|Ga0308175_101576956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300031996\|Ga0308176_10287073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.05%
Host-Associated	Host-Associated	0.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.29%
Aquatic	Environmental → Aquatic	24.76%
Plants	Host-Associated → Plants	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Sediment	Environmental → Aquatic → Sediment	16.19%
Freshwater	Environmental → Aquatic → Freshwater	5.71%
Marine	Environmental → Aquatic → Marine	2.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	16.19%
Sand	Environmental → Terrestrial → Soil → Sand	6.67%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.76%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.86%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	16.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.76%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	40.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	13.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.67%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.71%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.76%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014314	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1028762752	3300000956	Soil	MAMPTGDDPETVEQYYNYLQGHHQTDHTVATWHVDWLSLAWLWGFVIVLSVGILFWVWQYRTTLQRHEGRAAMYPVDNFGGYTTEQAGPATLFFILLTVVLTGFAAALIIGHLVWGQKF*
JGI10216J12902_1039544041	3300000956	Soil	MGMPTGDDPQTVEEYYRYLQGHHQTDHPVATWHVEWLALAWLWGFVIVLAVGILFWVWQYRTTLQRTEGRAAMYPVDEFGGYTTEQAGPATRFFILLTVVLTGFAAALIIGHLVWGQKF*
JGI10216J12902_1216318321	3300000956	Soil	MAMPTGDDPETVEQYYNYLQAHHQTDHTVATWHVDWLSLAWLWGFVIVLSLGILFWVWQYRTTLQRHEGRAAMYPVDNFGGYTTEQAGPATLFFILLTVVITGFAAALIIGHLVWGQKF*
JGI10216J12902_1235446892	3300000956	Soil	AMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILLVLILTGFGVAIIVGHLVWGQKF*
Ga0055471_100174522	3300003987	Natural And Restored Wetlands	MAMPTGDSPQTAQAYYDYLQAHHQTDHEVATWHIDWLDLAWLWGFVIVLVLGILFWVWQYRTTVQRTEGRAAMYPVDTFGGFTTEQAGPATLFFILLTVVLTGFAVALIVGHLVWGQKF*
Ga0055453_100026504	3300004006	Natural And Restored Wetlands	MGMPTGDSPQTAEDYYRYLQAHHETDHPVATWHVDWVSLAWLWGFVVVIVVGILFWVWQYRTTLQRSEGRAALYPVDSFGGYTTEQARPATLFFILLSVVLTAFAVALIVGHLVWGQKF*
Ga0062589_1007649052	3300004156	Soil	MGMPTGDSPQTAQEYYDYLQAHHQTDHEVATWHVHWFDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILLTVVLTGFAVALIVGHLVWGQKF*
Ga0062594_1020397242	3300005093	Soil	MGMPTGDSPQTAQEYYDYLQAHHQTDHEVATWHVHWFDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILITVVLTGFAVALIVGHLVWGQKF*
Ga0066690_103576763	3300005177	Soil	MSMPRGSSPQKAEQYYHYLQSHHLTDGRVATWRVDWMSLAWLWGFVIAMAVAMLLWIWQYRTTRQRPGIYPVDRFGGYTTELAGPATLFFVVLTLGLTAFAAAIIVGHIVWGQKF*
Ga0066676_106541622	3300005186	Soil	MGMPTGDSPQTAQEYYDYLQAHHQTDHEVATWHVHWFDLAWLWGFVIVLVVGILFWVWQYRTTLQRSEGRGGMYPVDSFGGYTTEQAGPATLFFILLTVVLTAFAAAIIIGHLVWGQKF*
Ga0066695_107295702	3300005553	Soil	MPTGDSPQKVRDYYLYLQGHHQSDGRIATWHVDWFSLAWLWGFVIVLGLVLIWWIWQYRTTRQRPGIYPVDSFGGFTSELAGPATRFFVLLTVILTGFAVAIIVGHIVWGQKF*
Ga0070664_1021769322	3300005564	Corn Rhizosphere	TDHAVATWHVGWIQLAWLWGFVVVLTLGILFWVWQYRTTVQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILITVVLTGFAVALIVGHLVWGQKF*
Ga0066652_1013969572	3300006046	Soil	VSAMPTGDSPATAEKYYLYLQGHHESDGRVVTWHVDWFSLAWLWGFVIAMILVILLWVWQYRTTRQRPGIYPVDRFGGFTSELAGPATRFFILLTVLLTGFAVAIIVGHLVWGQKF*
Ga0066710_1000373923	3300009012	Grasslands Soil	MAMPTGDSPQKVEEYYLYLQGQHETDHPVATWHVDWMSLAWMWGFVVVLVLAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFMLLTVVLTGFAVALIVGHLVWGQKF
Ga0066710_1028363521	3300009012	Grasslands Soil	MGMPTGDSPQKVEAYYKYLQGHHESDGRIATWHVDWTILAWLWRVVIVLALALLLWIWQYRTTRQRTGIYPVDRFGGYTSELAGPATYFFLLLTVVLTAFAVALIVGHIVYGQKF
Ga0066709_1009426164	3300009137	Grasslands Soil	MAVSAMPTGDSPATAEKYYLYLQGHHESDGRVVTWHVDWFSLAWLWGFVIAMILVILLWVWQYRTTRQRPGIYPVDRFGGFTSELAGPATRFFILLTVLLTGFAVAIIVGHLVWGQKF*
Ga0066709_1011346534	3300009137	Grasslands Soil	MAMPTGDTPQKVEEYYRYLQGHHETDHTVATWHVDWMSLAWLWGFVVVLSLGIIWWVWQYRSTRQRTGIYPVDSFGGYTTELAGPATLFFLLLTVILTGFAVVLIVSHLVWGQKF*
Ga0066709_1013877732	3300009137	Grasslands Soil	MPTGDSPQKVRDYYLYLQGHHQSDGRIATWHVDWFSLAWLWGFVAVLALVLIWWIWQYRTTRQRTGIYPVDSFGGFTSELAGPATRFFVLLTVILTGFAVAIIVGHIVWGQKF*
Ga0105056_10194581	3300009801	Groundwater Sand	MAMPTGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLILTGFGV
Ga0105084_10245863	3300009811	Groundwater Sand	MAMPTGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF*
Ga0126319_10985952	3300010147	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVLWIQLAWLWGFVIVLVLGILFWVWQYRTTLQRSEGRGAMYPVDSFGGYTTEQAGPATLFFILLTVVLTGFAVALVVGHLVWGQKF*
Ga0134080_104947612	3300010333	Grasslands Soil	MAMPTGDTPQKVDEYYNYLQGHHETDHTVATWHVDWLSLAWLWGFVVILALGIVFWVWQYRTTRQRTGIYPVDTFGGYTTELAGPATGFFLLLVLVL
Ga0138513_1000340393	3300011000	Soil	LQGHHETDHPVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVVILTGFAVALIVGHLVWGQKF*
Ga0137364_111449101	3300012198	Vadose Zone Soil	PQKVDEYYNYLQGHHETDHTVATWHVDWLSLAWLWGFVVILALGIVFWVWQYRTTRQRKGIYPVDTFGGYTTELAGPATGFFLLLVLVLTGFGVAIIVGHLVWGQKF*
Ga0137374_103804183	3300012204	Vadose Zone Soil	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIIVGHLVWGQKF*
Ga0137376_103418154	3300012208	Vadose Zone Soil	QGHHQTDHPVATWHVDWMSLAWMWGFVVVLALAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILLTVVLTGFAVAIIVGHLVWGQKF*
Ga0137376_108634591	3300012208	Vadose Zone Soil	MAMPTGDTPQKVDEYYNYLQGHHETDHTVATWHVDWLSLAWLWGFVVILALGIVFWVWQYRTTRQRKGIYPVDTFGGYTTELAGPATGFFLLLVLVLTGFGVAIIVGHLVWGQKF*
Ga0137372_106605982	3300012350	Vadose Zone Soil	MPTGDSPQKVRDYYLYLQGHHQSDGRIATWHVDWLSLAWLWGFVIVLGLVLIWWIWQYRTTRQRTGIYPVDSFGGFTSELAGPATRFFVLLTVILTGFAVALIVGHIVWGQKF*
Ga0137371_100850064	3300012356	Vadose Zone Soil	MPTGDSPQKVRDYYLYLQGHHQSDGRIATWHVDWLSLAWLWGFVIVLAAVLIWWIWQYRTTRQRTGIYPVDSFGGFTSELAGPATRFFVLLTVILTGFAVALIVGHIVWGQKF*
Ga0137373_110062792	3300012532	Vadose Zone Soil	MSSVPTLTPPSLPSGDSPAKVGDYYLYLQGHHQSDYRVATWTVDWVSIAWLWGFVIVMIIGLLWWIRQYRTTRQRTGIYPVDSFGGYTTELAGPATFFYLLLVVFLTAFAVAIAVGHIVYGQKF*
Ga0075316_11274962	3300014314	Natural And Restored Wetlands	MAMPTGDSPQTAQAYYDYLQAHHQTDHEVATWHIDWLDLAWLWGFVIVLVLGILFWVWQYRTTVQRTEGRAAMYPVDTFGGFTTEQAGPATLFFILL
Ga0184610_11875221	3300017997	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATIFFILLVLILT
Ga0184605_100029391	3300018027	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLVITGFGVALIVGHLVWGQKF
Ga0184605_100064145	3300018027	Groundwater Sediment	VGLMAMPTGDTPEKVEEYYRYLQGHHEADHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWIWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLVITGFGVALIVGHLVWGQKF
Ga0184605_100230884	3300018027	Groundwater Sediment	MAMPTGDTPQKVEDYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSLAIIWWIWQYRSTRQRTGLYPVDSFGGYTTELAGPATRFFLLLTVVLAGFAVALIVGHLVWGQKF
Ga0184608_100089341	3300018028	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0184608_101114064	3300018028	Groundwater Sediment	MGMPTGDSPQTAEEYYRYLQGHHETDHRVATWHVDWMSLAWLWGFVIVLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0184638_12791302	3300018052	Groundwater Sediment	MAMPTGDTPQKVEDYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLIL
Ga0184621_101202441	3300018054	Groundwater Sediment	ETDQRVATWHVDWMSLAWLWGFVIVLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0184619_100017319	3300018061	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWIWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLVITGFGVALIVGHLVWGQKF
Ga0184619_100675181	3300018061	Groundwater Sediment	MAMPTGDSPQKVEEYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLT
Ga0184619_102372742	3300018061	Groundwater Sediment	MAMPTGDSPQKVEDYYLYLQGHHQTDHTVATWHVDWMSLAWMWGFVVVLAVAILFWIWQYRTTLQRSEGRAAMYPVDNFGGYTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0184618_101172173	3300018071	Groundwater Sediment	MAMPTGDSPQKVEEYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFMLLTVVLTGFAVALIVGHLVWGQKF
Ga0184609_103635852	3300018076	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLIITGFGIALIVGHLVWGQKF
Ga0184612_100210614	3300018078	Groundwater Sediment	MAMPTGDMPQKVEDYYLYLQGHHETDHRVATWHVDWMSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLIITGFGVALIVGHLVWGQKF
Ga0066667_103612574	3300018433	Grasslands Soil	MAMPTGDTPQKVEEYYRYLQGHHETDHTVATWHVDWMSLAWLWGFVVVLSLGIIWWVWQYRSTRQRTGIYPVDSFGGYTTELAGPATLFFLLLTVILTGFAVVLIVGHLVWGQKF
Ga0184646_14935943	3300019259	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0184644_10853063	3300019269	Groundwater Sediment	YRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0193704_10807682	3300019867	Soil	MAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFVLLTIVLTGFAVALIVGHLVWGQKF
Ga0210378_100091395	3300021073	Groundwater Sediment	MAMPTGDMPQKVEDYYLYLQGHHETDHRVATWHVDWMSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLIITGFGIALIVGHLVWGQKF
Ga0210381_102185832	3300021078	Groundwater Sediment	TGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0222624_10474163	3300021951	Groundwater Sediment	MAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0224452_10229903	3300022534	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0222623_100024366	3300022694	Groundwater Sediment	MAMPTGDTPEKVEEYYRYLQGHHETDHPVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFGVALIVGHLVWGQKF
Ga0222622_101621394	3300022756	Groundwater Sediment	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVAVLVLGILFWVWQYRTTLQRSEGRGAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHIVWGQKF
Ga0210114_10651562	3300025795	Natural And Restored Wetlands	MAMPTGDSPQTAQAYYDYLQAHHQTDHEVATWHIDWLDLAWLWGFVIVLVLGILFWVWQYRTTVQRTEGRAAMYPVDTFGGFTTEQAGPATLFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0209896_10129772	3300027006	Groundwater Sand	MAMPTGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0209879_10816991	3300027056	Groundwater Sand	MAMPTGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLILTGFAVALIVGH
Ga0209878_10081054	3300027163	Groundwater Sand	MAMPTGDTREKVEEYYRYLQGHHETDHPVATWHVDWFSLAWMWGFVIVVAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLV
Ga0209878_10321111	3300027163	Groundwater Sand	TGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0209889_10487191	3300027952	Groundwater Sand	MAMPTGDTPERVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTSEQAGPATFFFMLLVLI
Ga0307276_100222652	3300028705	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRGAMYPVDSFGGYTTEQAGPATLFFVLLTVVLTGFAVALIVGHLVWGQKF
Ga0307293_100099571	3300028711	Soil	MAMPTGDSPQKVEDYYLYLQGHHESDHPVATWHVDWMSLAWMWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFMLLTVVLTGFAVALIVGHLVWGQKF
Ga0307293_100389834	3300028711	Soil	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIIVGHLVWGQKF
Ga0307313_100032404	3300028715	Soil	MAMPTGDSPQKVEDYYLYLQGHHESDHPVATWHVDWMSLAWMWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0307307_100075824	3300028718	Soil	PQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFMLLTIVLTGFAVALIVGHLVWGQKF
Ga0307301_100705183	3300028719	Soil	MAMPTGDDPETVEQYYNYLQAHHQTDHTVATWHVDWLSLAWLWGFVIVLSLGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFVLLTIVLTGFAVALIVGHLVWGQKF
Ga0307317_100020974	3300028720	Soil	MAMPTGDTPEKVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFVLLTIVLTGFAVALIVGHLVWGQKF
Ga0307319_102443571	3300028722	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVAVLVLGILFWVWQYRTTLQRSEGRGAMYPVDSFGGYTSEQAGPATFFFILLTVVLTGFAVALIVGHIVWGQKF
Ga0307316_101601773	3300028755	Soil	PTGDSPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVAVLVLGILFWVWQYRTTLQRSEGRGAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHIVWGQKF
Ga0307316_103624291	3300028755	Soil	DYYLYLQGHHESDHPVATWHVDWMSLAWMWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0307320_101790222	3300028771	Soil	MAMPTGDDPETVEQYYNYLQAHHQTDHTVATWHVDWLSLAWLWGFVIVLSLGILFWVWQYRTTLQRHEGRAAMYPVDNFGGYTTEQAGPATLFFILLIVVITGFAAALIIGHLVWGQKF
Ga0307320_104384952	3300028771	Soil	MGMPTGDSPQTAEEYYRYLQGHHETDHRVATWHVDWMSLAWLWGFVIVLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATFFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0307288_100179012	3300028778	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRGAMYPVDSFGGYTTEQAGPATLFFVLLTVVLTGFAVALIVGHIVWGQKF
Ga0307282_104361482	3300028784	Soil	MAMPTGDSPQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFMLLTIVLTGFAVALIVGHLVWGQKF
Ga0307299_100087544	3300028793	Soil	GLMAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFVLLTIVLTGFAVALIVGHLVWGQK
Ga0307299_101268701	3300028793	Soil	DSPQTAEEYYRYLQGHHETDHRVATWHVDWMSLAWLWGFVIVLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0307296_100087002	3300028819	Soil	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFGVALIVGHLVWGQKF
Ga0307289_101327133	3300028875	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHAVATWHVGWIQLAWLWGFVVVLTLGILLWVWQYRTTLQRSEGRGAMYPVDSFGGYTTEQAGPATLFFILITVVLTGFAVALIIGHVVWGQKF
Ga0307278_104508412	3300028878	Soil	MAMPTGDTPQKVEDYYRYLQGHHETDHPVATWHVDWLSLAWLWGFLIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLVLTGFGVALIVGHLVWGQKF
Ga0307300_102726692	3300028880	Soil	QGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFAVALIVGHLVWGQKF
Ga0307277_1000007924	3300028881	Soil	MAMPTGDDPETVEQYYKYLQAHHQTDHTVATWQVDWLSLAWLWGFVIVLSVGILLWVWQYRTTRQRTGIYPVDSFGGYTTELAGPATLFFLVLTVILTCFATALIIGHLVWGQKF
Ga0307308_100013931	3300028884	Soil	GVGLMAMPTGDSPQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFMLLTIVLTGFAVALIVGHLVWGQKF
Ga0308198_10680211	3300030904	Soil	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWLSLAWLWGFLIVIAVGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIVVGHLVWGQKF
Ga0308200_11195462	3300030905	Soil	PQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRGAMYPVDSFGGYTTEQAGPATLFFVLLTVVLTGFAVALIVGHLVWGQKF
Ga0308196_10047243	3300030989	Soil	MAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIIVGHLVWGQKF
Ga0308190_10265691	3300030993	Soil	MAMPTGDSPQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWRWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0308190_10286013	3300030993	Soil	MAMPTGDSPQKVEEYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIIVGHLVWGQKF
Ga0308190_11583771	3300030993	Soil	SPQTAEQYYDYLQAHHQTDHEVATWHVDWIDLAWLWGFVVVLVLGILFWVWQYRTTMQRSEGRGAMYPVDSFGGYTTEQAGPATLFFVLLTVVLTGFAVALIVGHLVWGQKF
Ga0308189_103321392	3300031058	Soil	MAMPTGDSPQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFMLLTVVLT
Ga0308189_103718422	3300031058	Soil	MGMPTGDTPQKAQDYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSVAIIWWIWQYRSTRQRTGIYPIDSFGGYTTELAGPATLFFVLLTVVLTGFAVALIVGHLVWGQKF
Ga0308192_10764952	3300031082	Soil	MAMPTGDSPQTAEEYYRYLQGHHETDHRVATWHVDWMSLAWLWGFVIDLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0308197_100035584	3300031093	Soil	MGMPTGDSPQTAEEYYRYLQGHHETDHRVATWHVDWMSLAWLWGFVIVLAAAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLTVVLTGFAVVLIVGHLVW
Ga0308197_100182961	3300031093	Soil	MAMPTGDSPQKVEEYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0308197_100945161	3300031093	Soil	MAMPTGDTPQKVEDYYLYLQGHHETDHPVATWHVDWMSLAWMWGFVVVLSLAIIWWIWQYRSTRQRTGLYPVDSFGGYTTELAGPATRFFLLLTVVLAGFAVALIV
Ga0308197_102183551	3300031093	Soil	MAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYMTEQAGPATFFFVLLTIVLTG
Ga0308197_104827241	3300031093	Soil	MAMPTGDTPEKVEEYYRYLQGQHETDHPVATWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFILLVLILTGFGVAIIVGHLVWGQKF
Ga0308199_10378871	3300031094	Soil	MAMPTGDSPQKVEDYYLYLQGHHESDHPVATWHVDWMSLAWMWGFVVVLTVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQARPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0308199_11199952	3300031094	Soil	MAMPTGDTPETVEEYYRYLQGHHETDHTVATWHVDWFSLAWMWGFVVVLTVGILFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFVLLTIV
Ga0308187_100815343	3300031114	Soil	MAMPTGDSPQKVEDYYLYLQGHHESDHPVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATLFFILLSVVLTGFAVALIVGHLVWGQKF
Ga0308187_100865422	3300031114	Soil	MAMPTGDTPEKVEEYYRYLQGHHETDHPVVTWHVDWFSLAWMWGFVIVIAAGLLFWVWQYRTTLQRSEGRAAMYPVDSFGGYTTEQAGPATFFFMLLVLILTGFGVALIVGHLVWGQKF
Ga0308187_104469421	3300031114	Soil	MAMPTGDDPETVEQYYNYLQAHHQTDHTVATWHVDWLSLAWLWGFVIVLSLGILFWVWQYRTTLQRHEGRAAMYPVDNFGGYTTEQAGPATLFFILLVVVITGFAAALIIGHLVWGQKF
Ga0308195_10530411	3300031123	Soil	MAMPTGDSPQKVEDYYLYLQGHHETDHTVATWHVDWMSLAWMWGFVVVLSVAILFWIWQYRTTLQRSEGRAAMYPVDSFGGFTTEQAGPATLFFMLLTIVLTGFAVALIVGHL
Ga0308175_1015769562	3300031938	Soil	MGMPTGDSPQTVEQYYDYLQAHHQTDHEVATWHVLWLQLAWLWGFVIVLVLGILFWVWQYRTTLQRTEGRGAMYPVDSFGGYTTEQAGPATLFFILLTVVLTGFAVALIVGHLVWGQKF
Ga0308176_102870733	3300031996	Soil	MGMPTGDSPQTAEQYYDYLQAHHQTDHEVATWHVHWIDLAWLWGFVIVLVLGILFWVWQYRTTLQRGEGRGAMYPVDTFGGYTTEQAGPATLFFILLTVVLTGFAVALIVGHLVWGQKF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094845

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences