NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F094806

Metagenome Family F094806

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F094806
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 56 residues
Representative Sequence MTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Number of Associated Samples 78
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 53.33 %
% of genes near scaffold ends (potentially truncated) 25.71 %
% of genes from short scaffolds (< 2000 bps) 69.52 %
Associated GOLD sequencing projects 68
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (77.143 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake
(24.762 % of family members)
Environment Ontology (ENVO) Unclassified
(88.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(81.905 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 37.25%    β-sheet: 0.00%    Coil/Unstructured: 62.75%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF07486Hydrolase_2 22.86
PF12804NTP_transf_3 17.14
PF13704Glyco_tranf_2_4 4.76
PF00487FA_desaturase 1.90
PF00154RecA 1.90
PF08013GatZ_KbaZ-like 1.90
PF08282Hydrolase_3 1.90
PF00004AAA 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG3773Cell wall hydrolase CwlJ, involved in spore germinationCell cycle control, cell division, chromosome partitioning [D] 22.86
COG0468RecA/RadA recombinaseReplication, recombination and repair [L] 1.90
COG0560Phosphoserine phosphataseAmino acid transport and metabolism [E] 1.90
COG0561Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatasesCoenzyme transport and metabolism [H] 1.90
COG1398Fatty-acid desaturaseLipid transport and metabolism [I] 1.90
COG1877Trehalose-6-phosphate phosphataseCarbohydrate transport and metabolism [G] 1.90
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 1.90
COG3239Fatty acid desaturaseLipid transport and metabolism [I] 1.90
COG3769Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamilyCarbohydrate transport and metabolism [G] 1.90
COG4573Tagatose-1,6-bisphosphate aldolase non-catalytic subunit AgaZ/GatZCarbohydrate transport and metabolism [G] 1.90


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A77.14 %
All OrganismsrootAll Organisms22.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001850|RCM37_1221535Not Available986Open in IMG/M
3300002408|B570J29032_109280808Not Available669Open in IMG/M
3300002835|B570J40625_100221741All Organisms → cellular organisms → Bacteria2014Open in IMG/M
3300003820|Ga0007863_1020291Not Available566Open in IMG/M
3300004686|Ga0065173_1030439Not Available984Open in IMG/M
3300004692|Ga0065171_1081171Not Available510Open in IMG/M
3300004694|Ga0065170_1013947Not Available1078Open in IMG/M
3300004805|Ga0007792_10284165Not Available508Open in IMG/M
3300004807|Ga0007809_10098684Not Available892Open in IMG/M
3300004807|Ga0007809_10120551Not Available787Open in IMG/M
3300005581|Ga0049081_10263080Not Available602Open in IMG/M
3300005585|Ga0049084_10072350Not Available1265Open in IMG/M
3300006071|Ga0007876_1002505All Organisms → cellular organisms → Bacteria5849Open in IMG/M
3300006108|Ga0007862_1073680Not Available665Open in IMG/M
3300006118|Ga0007859_1009426All Organisms → cellular organisms → Bacteria2263Open in IMG/M
3300006128|Ga0007828_1009343All Organisms → cellular organisms → Bacteria → Proteobacteria2091Open in IMG/M
3300006129|Ga0007834_1064727Not Available830Open in IMG/M
3300006129|Ga0007834_1127740Not Available523Open in IMG/M
3300009151|Ga0114962_10000732Not Available28617Open in IMG/M
3300009151|Ga0114962_10040141All Organisms → cellular organisms → Bacteria3147Open in IMG/M
3300009158|Ga0114977_10387551Not Available781Open in IMG/M
3300009159|Ga0114978_10014539All Organisms → cellular organisms → Bacteria5950Open in IMG/M
3300009159|Ga0114978_10041044All Organisms → cellular organisms → Bacteria → Proteobacteria3246Open in IMG/M
3300009159|Ga0114978_10325572Not Available935Open in IMG/M
3300009159|Ga0114978_10397283All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300009159|Ga0114978_10678555Not Available589Open in IMG/M
3300009164|Ga0114975_10116758Not Available1538Open in IMG/M
3300009180|Ga0114979_10122255Not Available1601Open in IMG/M
3300009180|Ga0114979_10629287Not Available611Open in IMG/M
3300009181|Ga0114969_10429289Not Available751Open in IMG/M
3300009183|Ga0114974_10113880All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1726Open in IMG/M
3300009183|Ga0114974_10225314Not Available1133Open in IMG/M
3300009184|Ga0114976_10218087Not Available1045Open in IMG/M
3300009184|Ga0114976_10442061Not Available676Open in IMG/M
3300010334|Ga0136644_10668606Not Available566Open in IMG/M
3300010885|Ga0133913_10146892Not Available6307Open in IMG/M
3300010885|Ga0133913_11252793All Organisms → Viruses → Predicted Viral1898Open in IMG/M
3300010885|Ga0133913_12957062All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1136Open in IMG/M
3300010885|Ga0133913_13041130Not Available1117Open in IMG/M
3300013004|Ga0164293_10241814Not Available1279Open in IMG/M
3300013004|Ga0164293_10835258Not Available582Open in IMG/M
3300013005|Ga0164292_10739700Not Available625Open in IMG/M
3300013372|Ga0177922_10961782Not Available740Open in IMG/M
3300020074|Ga0194113_11091779Not Available527Open in IMG/M
3300020141|Ga0211732_1250732Not Available962Open in IMG/M
3300020141|Ga0211732_1292602Not Available549Open in IMG/M
3300020151|Ga0211736_10502296Not Available595Open in IMG/M
3300020151|Ga0211736_10534524All Organisms → cellular organisms → Bacteria1623Open in IMG/M
3300020159|Ga0211734_11166194Not Available1166Open in IMG/M
3300020160|Ga0211733_10146821Not Available770Open in IMG/M
3300020161|Ga0211726_10063327Not Available784Open in IMG/M
3300020162|Ga0211735_10708915All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300020162|Ga0211735_10711947Not Available932Open in IMG/M
3300020572|Ga0207909_1071751Not Available505Open in IMG/M
3300020573|Ga0208485_1078516Not Available540Open in IMG/M
3300020733|Ga0214172_1005455All Organisms → cellular organisms → Bacteria2854Open in IMG/M
3300021136|Ga0214167_1062660Not Available735Open in IMG/M
3300021137|Ga0214165_1002161All Organisms → cellular organisms → Bacteria → Proteobacteria9526Open in IMG/M
3300021138|Ga0214164_1095295Not Available567Open in IMG/M
3300021139|Ga0214166_1004581All Organisms → cellular organisms → Bacteria → Proteobacteria4700Open in IMG/M
3300021354|Ga0194047_10401781Not Available513Open in IMG/M
3300021519|Ga0194048_10236181Not Available669Open in IMG/M
3300021962|Ga0222713_10854943Not Available503Open in IMG/M
3300022748|Ga0228702_1062568Not Available962Open in IMG/M
3300023174|Ga0214921_10576031Not Available511Open in IMG/M
3300023179|Ga0214923_10106271Not Available1876Open in IMG/M
3300023184|Ga0214919_10000709Not Available56981Open in IMG/M
3300023184|Ga0214919_10002047Not Available32167Open in IMG/M
3300023184|Ga0214919_10003927Not Available22060Open in IMG/M
3300023184|Ga0214919_10071638Not Available3124Open in IMG/M
3300023184|Ga0214919_10123453All Organisms → Viruses → Predicted Viral2130Open in IMG/M
3300025382|Ga0208256_1012487Not Available1332Open in IMG/M
3300025382|Ga0208256_1037465Not Available684Open in IMG/M
3300025389|Ga0208257_1006989Not Available2014Open in IMG/M
3300025392|Ga0208380_1002225Not Available4263Open in IMG/M
3300025417|Ga0208616_1004346Not Available2541Open in IMG/M
3300025598|Ga0208379_1048799All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300025616|Ga0208613_1118159Not Available597Open in IMG/M
3300025778|Ga0208388_1002797Not Available3417Open in IMG/M
3300025778|Ga0208388_1005944All Organisms → cellular organisms → Bacteria2245Open in IMG/M
3300027608|Ga0208974_1072162Not Available956Open in IMG/M
3300027659|Ga0208975_1001310Not Available10686Open in IMG/M
3300027708|Ga0209188_1054946All Organisms → Viruses → Predicted Viral1750Open in IMG/M
3300027734|Ga0209087_1110019Not Available1156Open in IMG/M
3300027749|Ga0209084_1049366Not Available2033Open in IMG/M
3300027782|Ga0209500_10255266Not Available762Open in IMG/M
3300027969|Ga0209191_1121544Not Available1091Open in IMG/M
3300031759|Ga0316219_1001799Not Available21764Open in IMG/M
3300031759|Ga0316219_1318344Not Available529Open in IMG/M
3300031884|Ga0316220_1020145All Organisms → cellular organisms → Bacteria3258Open in IMG/M
3300032117|Ga0316218_1008704All Organisms → cellular organisms → Bacteria → Proteobacteria6196Open in IMG/M
3300032117|Ga0316218_1010974All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5185Open in IMG/M
3300032117|Ga0316218_1074624Not Available1378Open in IMG/M
3300032561|Ga0316222_1011075Not Available6132Open in IMG/M
3300032562|Ga0316226_1009172All Organisms → cellular organisms → Bacteria → Proteobacteria6690Open in IMG/M
3300032677|Ga0316227_1034440Not Available2301Open in IMG/M
3300032753|Ga0316224_1008327Not Available6393Open in IMG/M
3300033816|Ga0334980_0387786Not Available530Open in IMG/M
3300034018|Ga0334985_0150756Not Available1587Open in IMG/M
3300034061|Ga0334987_0751763Not Available550Open in IMG/M
3300034071|Ga0335028_0491237Not Available681Open in IMG/M
3300034071|Ga0335028_0518140Not Available656Open in IMG/M
3300034093|Ga0335012_0366279Not Available713Open in IMG/M
3300034104|Ga0335031_0565133Not Available678Open in IMG/M
3300034283|Ga0335007_0608900Not Available630Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake24.76%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater22.86%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater17.14%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater11.43%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.52%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater4.76%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic3.81%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater1.90%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.95%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.95%
FreshwaterEnvironmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater0.95%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.95%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001850Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2aEnvironmentalOpen in IMG/M
3300002408Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)EnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003820Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07EnvironmentalOpen in IMG/M
3300004686Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)EnvironmentalOpen in IMG/M
3300004692Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)EnvironmentalOpen in IMG/M
3300004694Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)EnvironmentalOpen in IMG/M
3300004805Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6MEnvironmentalOpen in IMG/M
3300004807Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07EnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005585Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRFEnvironmentalOpen in IMG/M
3300006071Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09EnvironmentalOpen in IMG/M
3300006108Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07EnvironmentalOpen in IMG/M
3300006118Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07EnvironmentalOpen in IMG/M
3300006128Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07EnvironmentalOpen in IMG/M
3300006129Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07EnvironmentalOpen in IMG/M
3300009151Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaGEnvironmentalOpen in IMG/M
3300009158Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaGEnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009164Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaGEnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300009181Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaGEnvironmentalOpen in IMG/M
3300009183Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaGEnvironmentalOpen in IMG/M
3300009184Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaGEnvironmentalOpen in IMG/M
3300010334Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_EF_MetaG (v2)EnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013005Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020141Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020160Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020572Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020573Freshwater microbial communities from Lake Mendota, WI - 17JUL2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020733Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnionEnvironmentalOpen in IMG/M
3300021136Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnionEnvironmentalOpen in IMG/M
3300021137Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnionEnvironmentalOpen in IMG/M
3300021138Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnionEnvironmentalOpen in IMG/M
3300021139Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnionEnvironmentalOpen in IMG/M
3300021354Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L221-5mEnvironmentalOpen in IMG/M
3300021519Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5mEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022748Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17_Aug_MGEnvironmentalOpen in IMG/M
3300023174Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505EnvironmentalOpen in IMG/M
3300023179Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510EnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300025382Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)EnvironmentalOpen in IMG/M
3300025389Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)EnvironmentalOpen in IMG/M
3300025392Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)EnvironmentalOpen in IMG/M
3300025417Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)EnvironmentalOpen in IMG/M
3300025598Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)EnvironmentalOpen in IMG/M
3300025616Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M (SPAdes)EnvironmentalOpen in IMG/M
3300025778Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027708Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027734Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027749Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027782Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027969Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031884Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005EnvironmentalOpen in IMG/M
3300032117Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003EnvironmentalOpen in IMG/M
3300032561Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011EnvironmentalOpen in IMG/M
3300032562Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017EnvironmentalOpen in IMG/M
3300032677Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019EnvironmentalOpen in IMG/M
3300032753Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18013EnvironmentalOpen in IMG/M
3300033816Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005EnvironmentalOpen in IMG/M
3300034018Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034093Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072EnvironmentalOpen in IMG/M
3300034104Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
RCM37_122153513300001850Marine PlanktonMTNSELDVVDLAQEAMIKSIVTKPAEPVKVTPCADKDTECNQRWIDAFSDCC*
B570J29032_10928080813300002408FreshwaterTEAMVASIPATTVQPQAETPCTEKDTACNRRWIDSLSDCC*
B570J40625_10022174143300002835FreshwaterSDLATEAMVASIPATTVQPQAETPCVEKDTACNKRWIDSLSDCC*
Ga0007863_102029123300003820FreshwaterMETKADLSDLATEAMVQSIPAKPVQTQQQAETPCAENDKACTRRWIDSFSDCC*
Ga0065173_103043933300004686FreshwaterMENQADLSDLATQAMVASIPAKPVQTQQQADTPCAENDKACTKRWIDSFSDCC*
Ga0065171_108117123300004692FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC*
Ga0065170_101394713300004694FreshwaterVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC*
Ga0007792_1028416523300004805FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQVETPCADKDTACNRRWIDAFSDCC*
Ga0007809_1009868413300004807FreshwaterMENQADLSDLATEAMVASIPAKPIQPQAETPCDEKDTACNRRWIDAFSDCC*
Ga0007809_1012055133300004807FreshwaterVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC*
Ga0049081_1026308013300005581Freshwater LenticMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0049084_1007235033300005585Freshwater LenticMEKKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0007876_100250583300006071FreshwaterMENQTTPADLATEAMVASIPATPVQPQAETPCKDDDKACTKRWIDSFSDCC*
Ga0007862_107368023300006108FreshwaterKGSNMENQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC*
Ga0007859_100942633300006118FreshwaterMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC*
Ga0007828_100934333300006128FreshwaterMENQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC*
Ga0007834_106472723300006129FreshwaterMETKADLSDLATEAMVQSIPTKPVQTQQQAETPCAENDKACTRRWIDSFSDCC*
Ga0007834_112774013300006129FreshwaterNMENQTTPADLATEAMVASIPATPVQPQAETPCKDDDKACTKRWIDSFSDCC*
Ga0114962_10000732303300009151Freshwater LakeMEDNNPETTTELVNIATEAMVQSIPTKSQTESPCADKDPACNRRWIDAFSDCA*
Ga0114962_1004014133300009151Freshwater LakeVTQSLYFNYAQKAKGNKMENKANLSDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114977_1038755123300009158Freshwater LakeMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC*
Ga0114978_1001453973300009159Freshwater LakeVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC*
Ga0114978_1004104413300009159Freshwater LakeVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQPQAETPCADKDTACNRRWIDAFSDCC*
Ga0114978_1032557213300009159Freshwater LakeMTKQADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114978_1039728313300009159Freshwater LakeLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114978_1067855523300009159Freshwater LakeVTQSLYFNYAQKAKGNKMENKANLSDLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114975_1011675823300009164Freshwater LakeVTKSLYFNYAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQPQVETPCAEKDTACNRRWIDAFSDCC*
Ga0114979_1012225543300009180Freshwater LakeVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDYC*
Ga0114979_1062928733300009180Freshwater LakeEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC*
Ga0114969_1042928923300009181Freshwater LakeMENKADLTDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114974_1011388053300009183Freshwater LakeMNKQANLSDLATEAMVASIPAKPVQPQVETPCADKDTECNRRWIDAFSDCC*
Ga0114974_1022531433300009183Freshwater LakeMENKADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0114976_1021808713300009184Freshwater LakeVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPVEPQAETPCADKDTACNRRWID
Ga0114976_1044206113300009184Freshwater LakeKAKGNKMENKANLSDLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0136644_1066860623300010334Freshwater LakeMENKANLSDLATEAMVASIPATPVQPQAETPCAEKDTACNRRWIDAFSDCC*
Ga0133913_1014689243300010885Freshwater LakeVTKSLYFNYAQKAKGNKMENKANLSDLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0133913_1125279353300010885Freshwater LakeVTKSLYFNHAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC*
Ga0133913_1295706213300010885Freshwater LakeATEAMVASIPAKPVQPQVETPCADKDTACNRRWIDAFSDCC*
Ga0133913_1304113033300010885Freshwater LakeVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQPQAETPCADKDTACNRRWIDSLSDCC*
Ga0164293_1024181433300013004FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0164293_1083525823300013004FreshwaterVTKSLYFNYAQKAKGSKMENKADLSDLATEAMVASIPATTVQPQAETPCVEKDTACNKRWIDSLSDCC*
Ga0164292_1073970013300013005FreshwaterVTKSLYFNNAQKAKGSKMEKKADLSDLATEAMVASIPATTVQPQAETPCVEKDTACNKRWIDSLSDCC*
Ga0177922_1096178223300013372FreshwaterVTKSLYFNYAQKAKGSKMENKADLSDLATEAIVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC*
Ga0194113_1109177923300020074Freshwater LakeMEKQKDVSDIAHEAMVASIPAKPIQPEAVMPCSDEDKACTKRWIDSFSDCC
Ga0211732_125073233300020141FreshwaterMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0211732_129260223300020141FreshwaterMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSL
Ga0211736_1050229613300020151FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0211736_1053452453300020151FreshwaterMNKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC
Ga0211734_1116619433300020159FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC
Ga0211733_1014682133300020160FreshwaterMTKQADLSDLATEAMVSSIPAKPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0211726_1006332713300020161FreshwaterLNNYIVTKSLYFNYAQKAKGSKMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0211735_1070891523300020162FreshwaterMTKQADLSDLATEAMVSSIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC
Ga0211735_1071194733300020162FreshwaterVTKSLYFNDAQKAKGSKMEKKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0207909_107175123300020572FreshwaterQKAKGSKMEKKTDLSNLATEAMVASIPTTPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0208485_107851623300020573FreshwaterMTKQADLSELATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0214172_100545533300020733FreshwaterMETKADLSDLATEAMVQSIPAKPVQTQQQTETPCAENDKACTRRWIDSFSDCC
Ga0214167_106266023300021136FreshwaterLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDTACTRRWIDSFSDCC
Ga0214165_100216173300021137FreshwaterVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC
Ga0214164_109529523300021138FreshwaterDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0214166_100458153300021139FreshwaterMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDKACTRRWIDSFSDCC
Ga0194047_1040178123300021354Anoxic Zone FreshwaterMTKQADLSDLATEAMVASIPAKPIQPQAETPCAEKDTACNRRWIDSLSDCC
Ga0194048_1023618123300021519Anoxic Zone FreshwaterMTPKDALDLATEAMIESIVTEPIQKQQPTETPCESNDKVCTRRWIDSQSDCC
Ga0222713_1085494313300021962Estuarine WaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCAEKDTVCNRRWIDSLSDCC
Ga0228702_106256823300022748FreshwaterMETKADLSDLATEAMVASIPAKPVQTQQQAETPCADNDKVCTRRWIDSFSDCC
Ga0214921_1057603123300023174FreshwaterICPKGERKYMNKQADLSDLATEAMVASIPAKPIQPQAETPCADKDTACNRRWIDAFSDCC
Ga0214923_1010627133300023179FreshwaterMENKADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0214919_10000709113300023184FreshwaterVTKSLYFNNAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC
Ga0214919_1000204763300023184FreshwaterVTKSLYFNYAQKAKGSKMNKKADLSDLATEAMVASIPAKPVQPQAETPCADKDTACNRRWIDAFSDCC
Ga0214919_10003927263300023184FreshwaterMEKQDNLSDLAHEAMVASIPAKPIQPQAETPCADDDKACTKRWIDSFSDCC
Ga0214919_1007163833300023184FreshwaterMEKQKDVSDLAHEAMVASIPAKPIQPQAETPCADDDKACTKRWIDSFSDCC
Ga0214919_1012345363300023184FreshwaterMNKQADLSDLATEAMVASIPAKPIQPQAETPCADKDTACNRRWIDAFSDCC
Ga0208256_101248733300025382FreshwaterMETKAYLSDLATEAMVQSIPAKPVQTQQQTETPCAENDKACTRRWIDSFSDCC
Ga0208256_103746513300025382FreshwaterTEAMVASIPATPVQPQAETPCKDDDKACTKRWIDSFSDCC
Ga0208257_100698923300025389FreshwaterMETKADLSDLATEAMVQSIPAKPVQTQQQAETPCAENDKACTRRWIDSFSDCC
Ga0208380_100222553300025392FreshwaterMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0208616_100434633300025417FreshwaterMETKADLSDLATEAMVQSIPTKPVQTQQQAETPCAENDKACTRRWIDSFSDCC
Ga0208379_104879923300025598FreshwaterMENQADLSDLATEAMVASIPAKPIQPQAETPCDEKDTACNRRWIDAFSDCC
Ga0208613_111815913300025616FreshwaterMTKQADLSDLATEAMVASIPAKPIQPQAETPCAEKDTACNRRWIDAFSDCC
Ga0208388_100279713300025778FreshwaterQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0208388_100594453300025778FreshwaterMENQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDC
Ga0208974_107216223300027608Freshwater LenticMENKADLPDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0208975_1001310113300027659Freshwater LenticVTKSLYFNYAQKAKGNKMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0209188_105494643300027708Freshwater LakeMEDNNPETTTELVNIATEAMVQSIPTKSQTESPCADKDPACNRRWIDAFSDCA
Ga0209087_111001913300027734Freshwater LakeMTKQADLSDLATEAMVASIPAKPIQPQVETPCAEKDTACNRRWIDAFSDCC
Ga0209084_104936633300027749Freshwater LakeMENKANLSDLATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0209500_1025526613300027782Freshwater LakeAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0209191_112154423300027969Freshwater LakeMTKQADLSDLATEAMVASIPAKPVQPQVETPCADKDTACNRRWIDAFSDCC
Ga0316219_1001799123300031759FreshwaterVTQSLYFNHAQKAKGSNMENQADLSDLATQAMVASIPAKPVQTQQQADTPCAENDKACTKRWIDSFSDCC
Ga0316219_131834413300031759FreshwaterMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDTACTRRWIDSFSDCC
Ga0316220_102014513300031884FreshwaterMTKQADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0316218_100870413300032117FreshwaterNNLIVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPIQTQPQAETPCAENDTACTRRWIDSFSDCC
Ga0316218_101097473300032117FreshwaterVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0316218_107462413300032117FreshwaterNLIVTQSLYFNKAQKAKGSKMTKQADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0316222_101107513300032561FreshwaterKAKGSKMTKQADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0316226_100917273300032562FreshwaterMENQADLSDLATQAMVASIPAKPVQTQQQADTPCAENDKACTKRWIDSFSDCC
Ga0316227_103444013300032677FreshwaterAMVASIPAKPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0316224_100832773300032753FreshwaterVTQSLYFNKAQKAEGSKMTKQADLSDLATEAMVASIPATPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0334980_0387786_247_4533300033816FreshwaterVTKSLYFNYAQKAKGSKMTKQADLTELATEAMVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0334985_0150756_1224_13793300034018FreshwaterMTKQADLSDLATEAMVASIPATTVQPQAETPCVEKDTACNKRWIDSLSDCC
Ga0334987_0751763_424_5493300034061FreshwaterATEAMVASIPTTPVQPQAETPCTEKDTACNRRWIDSLSDCC
Ga0335028_0491237_461_6673300034071FreshwaterVTQSLYFNYAQKAKGSKMTKQADLSDLATEAMIASIPAKPVQPQAETPCAEKDTVCNRRWIDSLSDCC
Ga0335028_0518140_245_4513300034071FreshwaterVTKSLYFNNAQKAKGSKMEKKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0335012_0366279_338_5443300034093FreshwaterVTKSLYFNNAQKAKGSKMEKKADLSDLATEAMVASIPATTVQPQAETPCVEKDTACNKRWIDSLSDCC
Ga0335031_0565133_1_1113300034104FreshwaterVASIPATPVQPQAETPCTEKDTACNKRWIDSLSDCC
Ga0335007_0608900_28_2343300034283FreshwaterVTKSLYFNYAQKAKGSKMENKADLSDLATEAMVASIPATTVQPQAETPCTEKDTACNKRWIDSLSDCC


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.