Metagenome Family F094775

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094775
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	81 residues
Representative Sequence	MTADILENELKTLPETERARIIRGALQELSPPTLKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIRDEHFERPPI
Number of Associated Samples	76
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.10 %
% of genes near scaffold ends (potentially truncated)	38.10 %
% of genes from short scaffolds (< 2000 bps)	69.52 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (71.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (27.619 % of family members)
Environment Ontology (ENVO)	Unclassified (60.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.06% β-sheet: 0.00% Coil/Unstructured: 50.94%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF13414	TPR_11	6.67
PF00005	ABC_tran	2.86
PF13183	Fer4_8	1.90
PF00557	Peptidase_M24	1.90
PF02452	PemK_toxin	1.90
PF00551	Formyl_trans_N	1.90
PF09210	BE_C	1.90
PF01261	AP_endonuc_2	0.95
PF12146	Hydrolase_4	0.95
PF02417	Chromate_transp	0.95
PF00158	Sigma54_activat	0.95
PF03484	B5	0.95
PF12951	PATR	0.95
PF00248	Aldo_ket_red	0.95
PF13361	UvrD_C	0.95
PF00150	Cellulase	0.95
PF13540	RCC1_2	0.95
PF03741	TerC	0.95
PF13181	TPR_8	0.95
PF07589	PEP-CTERM	0.95
PF13884	Peptidase_S74	0.95
PF02518	HATPase_c	0.95
PF01259	SAICAR_synt	0.95
PF02591	zf-RING_7	0.95
PF00346	Complex1_49kDa	0.95
PF02894	GFO_IDH_MocA_C	0.95
PF03349	Toluene_X	0.95
PF00106	adh_short	0.95
PF04255	DUF433	0.95
PF17164	DUF5122	0.95
PF03309	Pan_kinase	0.95
PF14833	NAD_binding_11	0.95
PF08281	Sigma70_r4_2	0.95
PF02384	N6_Mtase	0.95
PF00850	Hist_deacetyl	0.95
PF13875	DUF4202	0.95
PF00271	Helicase_C	0.95
PF03099	BPL_LplA_LipB	0.95
PF06983	3-dmu-9_3-mt	0.95
PF13570	PQQ_3	0.95
PF08922	DUF1905	0.95
PF12730	ABC2_membrane_4	0.95
PF00764	Arginosuc_synth	0.95
PF13090	PP_kinase_C	0.95
PF13089	PP_kinase_N	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.90
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.90
COG1543	Predicted glycosyl hydrolase, contains GH57 and DUF1957 domains	Carbohydrate transport and metabolism [G]	1.90
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.95
COG0072	Phenylalanyl-tRNA synthetase beta subunit	Translation, ribosomal structure and biogenesis [J]	0.95
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.95
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.95
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.95
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.95
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.95
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.95
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.95
COG1579	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	General function prediction only [R]	0.95
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	0.95
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.95
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.95
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.95
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	0.95
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	0.95
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.95
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.95
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.43 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	49.52 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	49.52 %
Unclassified	root	N/A	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.76 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.76 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	1.90 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.90 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	6.67 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.90 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.95 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908038\|B3_all_c_ConsensusfromContig54296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	702	Open in IMG/M
3300004092\|Ga0062389_101287556	Not Available	916	Open in IMG/M
3300005591\|Ga0070761_10151584	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300005712\|Ga0070764_11019056	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300009500\|Ga0116229_11452626	Not Available	543	Open in IMG/M
3300009630\|Ga0116114_1142009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300009645\|Ga0116106_1089678	Not Available	999	Open in IMG/M
3300010343\|Ga0074044_10362926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	950	Open in IMG/M
3300010379\|Ga0136449_100081922	All Organisms → cellular organisms → Bacteria	6797	Open in IMG/M
3300014151\|Ga0181539_1063898	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300014152\|Ga0181533_1297916	Not Available	586	Open in IMG/M
3300014159\|Ga0181530_10401331	Not Available	698	Open in IMG/M
3300014160\|Ga0181517_10030249	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300014160\|Ga0181517_10086390	Not Available	1848	Open in IMG/M
3300014162\|Ga0181538_10536102	Not Available	614	Open in IMG/M
3300014164\|Ga0181532_10002682	All Organisms → cellular organisms → Bacteria	16538	Open in IMG/M
3300014165\|Ga0181523_10221536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1088	Open in IMG/M
3300014167\|Ga0181528_10044184	All Organisms → cellular organisms → Bacteria	2483	Open in IMG/M
3300014199\|Ga0181535_10495395	Not Available	707	Open in IMG/M
3300014200\|Ga0181526_10000731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	33582	Open in IMG/M
3300014489\|Ga0182018_10440257	Not Available	694	Open in IMG/M
3300014492\|Ga0182013_10030168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4567	Open in IMG/M
3300014494\|Ga0182017_10935073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300014495\|Ga0182015_10659954	Not Available	661	Open in IMG/M
3300014501\|Ga0182024_10037148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	8135	Open in IMG/M
3300014501\|Ga0182024_10168135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3049	Open in IMG/M
3300014501\|Ga0182024_10215239	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300014501\|Ga0182024_12068449	Not Available	627	Open in IMG/M
3300014638\|Ga0181536_10419569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	595	Open in IMG/M
3300014838\|Ga0182030_10867342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	814	Open in IMG/M
3300014839\|Ga0182027_10000086	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	137582	Open in IMG/M
3300014839\|Ga0182027_10007975	All Organisms → cellular organisms → Bacteria	15500	Open in IMG/M
3300014839\|Ga0182027_10906168	Not Available	912	Open in IMG/M
3300014839\|Ga0182027_10919187	Not Available	904	Open in IMG/M
3300014839\|Ga0182027_11127679	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	794	Open in IMG/M
3300017925\|Ga0187856_1010110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5486	Open in IMG/M
3300017929\|Ga0187849_1103459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1205	Open in IMG/M
3300017931\|Ga0187877_1276457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300017935\|Ga0187848_10017921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3795	Open in IMG/M
3300017935\|Ga0187848_10021669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3369	Open in IMG/M
3300017935\|Ga0187848_10228560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	791	Open in IMG/M
3300017941\|Ga0187850_10331229	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300017988\|Ga0181520_10030020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5743	Open in IMG/M
3300017988\|Ga0181520_10111363	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300017996\|Ga0187891_1277302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300018003\|Ga0187876_1134168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	881	Open in IMG/M
3300018003\|Ga0187876_1172069	Not Available	743	Open in IMG/M
3300018003\|Ga0187876_1208843	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300018008\|Ga0187888_1011524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5155	Open in IMG/M
3300018008\|Ga0187888_1278794	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300018014\|Ga0187860_1344710	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300018016\|Ga0187880_1423172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	554	Open in IMG/M
3300018017\|Ga0187872_10130622	Not Available	1222	Open in IMG/M
3300018021\|Ga0187882_1264551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	663	Open in IMG/M
3300018022\|Ga0187864_10435746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	559	Open in IMG/M
3300018024\|Ga0187881_10153508	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1003	Open in IMG/M
3300018033\|Ga0187867_10105150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1642	Open in IMG/M
3300018034\|Ga0187863_10639191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	600	Open in IMG/M
3300018035\|Ga0187875_10021783	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3889	Open in IMG/M
3300018037\|Ga0187883_10762190	Not Available	505	Open in IMG/M
3300018038\|Ga0187855_10133752	Not Available	1484	Open in IMG/M
3300018043\|Ga0187887_10859834	Not Available	537	Open in IMG/M
3300018046\|Ga0187851_10503167	Not Available	688	Open in IMG/M
3300018046\|Ga0187851_10549622	Not Available	654	Open in IMG/M
3300018046\|Ga0187851_10820348	Not Available	523	Open in IMG/M
3300019082\|Ga0187852_1418918	Not Available	521	Open in IMG/M
3300021474\|Ga0210390_10018225	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5692	Open in IMG/M
3300022524\|Ga0224534_1037311	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1104	Open in IMG/M
3300026304\|Ga0209240_1288998	Not Available	507	Open in IMG/M
3300027853\|Ga0209274_10172887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1094	Open in IMG/M
3300027854\|Ga0209517_10211760	Not Available	1187	Open in IMG/M
3300027905\|Ga0209415_10981832	Not Available	564	Open in IMG/M
3300028563\|Ga0265319_1004085	All Organisms → cellular organisms → Bacteria	7354	Open in IMG/M
3300028800\|Ga0265338_10216807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1432	Open in IMG/M
3300029913\|Ga0311362_10972218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	668	Open in IMG/M
3300030045\|Ga0302282_1376283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	503	Open in IMG/M
3300030503\|Ga0311370_10885563	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1014	Open in IMG/M
3300031234\|Ga0302325_11589619	Not Available	835	Open in IMG/M
3300031236\|Ga0302324_101033254	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300031236\|Ga0302324_101140008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1045	Open in IMG/M
3300031236\|Ga0302324_101518548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	869	Open in IMG/M
3300031240\|Ga0265320_10239612	Not Available	805	Open in IMG/M
3300031249\|Ga0265339_10470615	Not Available	582	Open in IMG/M
3300031344\|Ga0265316_10812570	Not Available	655	Open in IMG/M
3300031524\|Ga0302320_10004375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32114	Open in IMG/M
3300031524\|Ga0302320_10050026	All Organisms → cellular organisms → Bacteria	7455	Open in IMG/M
3300031524\|Ga0302320_10268026	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300031525\|Ga0302326_11004118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1172	Open in IMG/M
3300031708\|Ga0310686_109043879	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	608	Open in IMG/M
3300031708\|Ga0310686_117715593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	574	Open in IMG/M
3300032069\|Ga0315282_10056324	All Organisms → cellular organisms → Bacteria	4147	Open in IMG/M
3300032160\|Ga0311301_10289182	All Organisms → cellular organisms → Bacteria	2641	Open in IMG/M
3300032805\|Ga0335078_10636110	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300033134\|Ga0335073_11391846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300033402\|Ga0326728_10001872	All Organisms → cellular organisms → Bacteria	72335	Open in IMG/M
3300033402\|Ga0326728_10007755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	27247	Open in IMG/M
3300033402\|Ga0326728_10012039	All Organisms → cellular organisms → Bacteria	19453	Open in IMG/M
3300033402\|Ga0326728_10022316	All Organisms → cellular organisms → Bacteria	11767	Open in IMG/M
3300033402\|Ga0326728_10025997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	10416	Open in IMG/M
3300033402\|Ga0326728_10290910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1503	Open in IMG/M
3300033405\|Ga0326727_10138117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2948	Open in IMG/M
3300033405\|Ga0326727_10217473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2048	Open in IMG/M
3300033405\|Ga0326727_10319518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1507	Open in IMG/M
3300033405\|Ga0326727_11178741	Not Available	536	Open in IMG/M
3300033823\|Ga0334837_087842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.29%
Host-Associated	Host-Associated	5.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.52%
Aquatic	Environmental → Aquatic	44.76%
Plants	Host-Associated → Plants	5.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	44.76%
Soil	Environmental → Terrestrial → Soil	27.62%
Peat	Environmental → Terrestrial → Peat	21.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.76%
Peat Moss	Host-Associated → Plants → Peat Moss	0.95%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	43.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	21.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.76%
Loam	Environmental → Terrestrial → Soil → Loam	2.86%
Lake	Environmental → Aquatic → Freshwater → Lake	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	41.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	21.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.95%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.95%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	27.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	13.33%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	9.52%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	3.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B3_all_c_00806620	2124908038	Soil	MKADILENELKTLPETERARIIRGALQELSLPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIRDEHFERPPV
Ga0062389_1012875562	3300004092	Bog Forest Soil	MEAPATTSKPCLAPPPTIIHINGMTADILENELKTLPEEERARIIRGVLQEFSPPGLKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIQEKQFEHLPV*
Ga0070761_101515843	3300005591	Soil	VTADILEIELRTLPEAERARIIRSALQEISPPTLKELERQLRRCAHPEVPEDVWVGFEEAEDGSGIEVREEHFERPPI*
Ga0070764_110190562	3300005712	Soil	MTANVLEQELKTLPEAERAQVIRAAMRELSPAALKVLERQVRRLAHPEVPEDVWTGFEEAEDGRGIEIRDEHFDQPPA*
Ga0116229_114526261	3300009500	Host-Associated	MTSAILENELKTLPEQERARIIRGALRDLSKPTLMLLERQLRRWAHPEVPEDVWIG
Ga0116114_11420091	3300009630	Peatland	MKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV*
Ga0116106_10896783	3300009645	Peatland	WLAPRPKISNNDGMKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV*
Ga0074044_103629261	3300010343	Bog Forest Soil	MCLAPPPKICDNNGMTSDILENELKTLPEAERARIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEHPP
Ga0136449_1000819228	3300010379	Peatlands Soil	MTADMLANELKTLPETERARIIRGALQELSPAALKAMERQLRRFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV*
Ga0181539_10638982	3300014151	Bog	MVTILSDTRRVEAYYGRLANRALFRHIRRMTASTLEHALKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDDHFDQPPA*
Ga0181533_12979161	3300014152	Bog	MRLAPPPQISNTNDITADMLANELKTLPETERARIIRGALQELSPAALKALERQLRPFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV*
Ga0181530_104013311	3300014159	Bog	MCLAPPPQISHVTGMKADILENELKSLPESERARIIRGALQALSPPILKALERQLRRYAHPEVPEDVWIGFEEAEDGCGLEVRDGQFQNP*
Ga0181517_100302495	3300014160	Bog	LERRVEARYGRLANRALFRHIRRMTASTLEHELKALPEAERAQIIHTAMRELSPGALKGLERQLRRLAHPEVPEDVWAGFEEAEDGRGIEMRDEHFDQPPA*
Ga0181517_100863902	3300014160	Bog	MTVDILENELKTLPETERTRIIRGAIQELSPPALKALERQLRRFTHPEVPEDVWIGFEEAEDGQGIEIRDEHFERPPV*
Ga0181538_105361021	3300014162	Bog	MCLAAPPQICHATGMTVDVLENELKTLSEAERTRIIRGALQELSPAAIKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEH
Ga0181532_100026824	3300014164	Bog	MCLAAPPQICHATGMTVDVLENELKTLSEAERTRIIRGALQELSPAAIKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEHPPN*
Ga0181523_102215361	3300014165	Bog	MKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEKPPI*
Ga0181528_100441842	3300014167	Bog	MTASMLENELKTLSDSEPAKIICAALPDLSPSALKKLERQLRRLTHPTVPEDVWTGFEEAEDGLGIEVRDEHFDQPPV*
Ga0181535_104953951	3300014199	Bog	MTASTLEHELKALPEAERAQIIHTAMRELSPGALKGLERQLRRLAHPEVPEDVWAGFEEAEDGRGIEM
Ga0181526_100007314	3300014200	Bog	MPKMCLAAPPQICHATGMTVDVLENELKTLSEAERTRIIRGALQELSPAAIKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEHPPN*
Ga0182018_104402572	3300014489	Palsa	MTATVVERELKALPEAARAKVIGATMRELSPAKLKTIERQLRRLAHPEVPADVWVGFEEAQDGLGVEIKDEHFA*
Ga0182013_100301682	3300014492	Bog	MQDRSREFRLAPPPQISNTNTMTADILEIELKTLPETERARIIRGAIQELSPAALKALERQLRRFAHPEIPEDVWIGFEEAEDGKGIEIQDEHFQRPPV*
Ga0182017_109350732	3300014494	Fen	MKADILENELKTLPETERARIIRGAIQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGLGIEIRDEHFERPPV*
Ga0182015_106599541	3300014495	Palsa	VTVEILENELETLPEMERARIIGGALQELSPPTLKTLERQLRRCAHPEVPENVWTGFEEAEDGRGIEVRNEHFERPPV*
Ga0182024_100371484	3300014501	Permafrost	MTTTALKRQLQSLPEAERSNVIRAALPKLSPAALKTIERQLRRLAHPEVPEDVWVGFEEAEDGSGMVMEDKHFTNPPA*
Ga0182024_101681356	3300014501	Permafrost	MTATAIKRELLALPETERRRIISDALDKLSVPALKELERHLRRLAHPEIPEDVWLGFEQAEDGSGIEIKDEHFARPPA*
Ga0182024_102152393	3300014501	Permafrost	MTANTVERELKALPEAERTQIIRAALPQLSPTALKELERHLRRLAHPEVPEDVWTGFEEAEDGKGVEIQDEHFEHPPA*
Ga0182024_120684491	3300014501	Permafrost	EERARIIRRALQKLSPPALKVLERQVRRFAHPEVTEDVWTGFEEAEDGRGIEIRDEHFERPPV*
Ga0181536_104195692	3300014638	Bog	EHELKTLPEAERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV*
Ga0182030_108673422	3300014838	Bog	MTVDALENELKTLPEADHTRIIRGALRALSPAAMRTLERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRD
Ga0182027_1000008617	3300014839	Fen	MTSDLLENELKTLPESERVRIIRGALQELSPLTLKALERQLRRLAHPEVPEDVWTGFEEAEDGQGIEVRDEHFERPPV*
Ga0182027_100079754	3300014839	Fen	MNTKKMNTKKMNSQTLVAPPPQISNINGMKADILENELKTLPETDRVRIIRGALQELSPSTLKALVRQLRRFAHPEVPEDVWIGFEEAEDGRGIEIRDEHFDRPPI*
Ga0182027_109061682	3300014839	Fen	MTSDILENELKTLPETERARIIRRAIQELSPPALKSLERQLRRFTHPEVPEDVWTGFEEAEDGLGIEVRDEQFLFV*
Ga0182027_109191871	3300014839	Fen	MADILENELKTLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIRDEHFENPPICQLLF
Ga0182027_111276791	3300014839	Fen	NELKTLPETERARIIRGALEALSPPTLKALERQLRRVAHPEVPEDVWIGFEEAEEGRGIEVRDAHFEHPPV*
Ga0187856_10101102	3300017925	Peatland	VTASILEHELKTLPEAERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0187849_11034593	3300017929	Peatland	MTASTREHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0187877_12764571	3300017931	Peatland	NRALFRHIRRMTASTLEHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0187848_100179212	3300017935	Peatland	MRLAPPPQISNTNDITADMLANELKTLPETERARIIRGALQELSPAALKALERQLRPFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0187848_100216694	3300017935	Peatland	MKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEE
Ga0187848_102285601	3300017935	Peatland	LGRRVEARYGRLANRALFRHIRRMTASTLEHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0187850_103312292	3300017941	Peatland	MKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV
Ga0181520_100300205	3300017988	Bog	MTASTLEHELKALPEAERAQIIHTAMRELSPGALKGLERQLRRLAHPEVPEDVWAGFEEAEDGRGIEMRDEHFDQPPA
Ga0181520_101113635	3300017988	Bog	MTVDILENELKTLPETERTRIIRGAIQELSPPALKALERQLRRFTHPEVPEDVWIGFEEAEDGQGIEIRDEHFERPPV
Ga0187891_12773022	3300017996	Peatland	TASILEHELKTLPEAERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0187876_11341683	3300018003	Peatland	VEARYGRLANRALFRHIRRMTASTLEHELKALPEAERAQIIHTAMRELSPGALKGLERQLRRLAHPEVPEDVWAGFEEAEDGRGIEMRDEHFDQPPA
Ga0187876_11720691	3300018003	Peatland	MRLAPPPQISNTNDITADMLANELKTLPETERARIIRGALQELSPAALKALERQLRPFAHPEVPEDVWIGFEEA
Ga0187876_12088431	3300018003	Peatland	MKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIR
Ga0187888_10115243	3300018008	Peatland	MLANELKTLPETERARIIRGALQELSPAALKALERQLRPFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0187888_12787942	3300018008	Peatland	GKIIPQLWLAPRPKISNNDGMKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV
Ga0187860_13447102	3300018014	Peatland	GMKADILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV
Ga0187880_14231721	3300018016	Peatland	HELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0187872_101306223	3300018017	Peatland	DILENELKSLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEEVWTGFEEAEDGRGIEIRDEHFEHPPV
Ga0187882_12645512	3300018021	Peatland	QTARINKPEAGQTPKMCLAPPLQMNNNNCMTADILENELRTLPETERARILRGALQELSPAALKALERHLRRFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0187864_104357462	3300018022	Peatland	ARYGRLANRALFRHIRRMTASTLEHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0187881_101535082	3300018024	Peatland	MTADILENELRTLPETERARILRGALQELSPAALKALERHLRRFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0187867_101051503	3300018033	Peatland	MTVDILENELKTLPETERAGIISRSLQELSPTALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGMVIRDEHFKRPPV
Ga0187863_106391911	3300018034	Peatland	MTADILENELKTLPETERARIIGGALQELSPATLKALERQFRRCAHPEVPEDVWIGFEEAEDGRGIEIRDEHFERPPV
Ga0187875_100217834	3300018035	Peatland	MCLAAPPQICHATGMTVDVLENELKTLSEAERTRIIRGALQELSPAAIKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEHPPN
Ga0187883_107621901	3300018037	Peatland	MTVDTLENELKTLPETERARIIRGAIQDLSPTSLKAMEWQLRRFAHPEVPEDVWTGFEEAED
Ga0187855_101337522	3300018038	Peatland	MTVDTLENELKTLPETERARIIRGAIQDLSPTSLKAMEWQLRRFAHPEVPEDVWTGFEEAEDGKGIEIRDEHFEHPPV
Ga0187887_108598341	3300018043	Peatland	MTVDILENELKTLPETERAGIISRSLQELSPTALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIRDEHFERPPRFRSARRR
Ga0187851_105031671	3300018046	Peatland	MTVDTLENELKTLPETERARIIRGAIQDLSPTSLKAMEWQLRRFAHPEVPEDVWTGFEEAEDGKGIEI
Ga0187851_105496221	3300018046	Peatland	MKADLLENELKTLPEAERARIIRGALLELSPPALKALERQLRRFALPEVARDVWSGCQEAEDGRGIEIRDGHFERRPA
Ga0187851_108203481	3300018046	Peatland	RLINLEAWPADKIHLAAPPWISNTNTMTVDILENELKTLPETERAGIISRSLQELSPTALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGMVIRDEHFKRPPV
Ga0187852_14189182	3300019082	Peatland	RHSSTDALERRVEARYGRLANRALFRHIRRMTASTLEHELKALPEAERAQIIHTAMRELSPGALKGLERQLRRLAHPEVPEDVWAGFEEAEDGRGIEMRDEHFDQPPA
Ga0210390_100182254	3300021474	Soil	MTASSLERELKTLPEEERAQIIRAALRELSPTILKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPI
Ga0224534_10373114	3300022524	Soil	VNYAGALCLAWPPPINYANAMTVDILENELKTLPETERARIIRRALQELSPPALKALERQLRRFAHPEVPEDVWIGFEEAEDGRGIEIRDEHFELPPV
Ga0209240_12889981	3300026304	Grasslands Soil	HELKALPEAERAQIISDALPSLSPGTLKGLERRMRRAAHPEVPEDVWIGFEEAEDGRGIEIKDEHFEHPPV
Ga0209274_101728871	3300027853	Soil	VTADILEIELRTLPEAERARIIRSALQEISPPTLKELERQLRRCAHPEVPEDVWVGFEEAEDGSGIEVREEHFERPPI
Ga0209517_102117602	3300027854	Peatlands Soil	MTADMLANELKTLPETERARIIRGALQELSPAALKALERQLRRFAHPEVPEDVWIGFE
Ga0209415_109818322	3300027905	Peatlands Soil	MCLAPPPQISNTIRMTADMLANELKTLPETERARIIRGALQELSPAALKALERQLRRFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0265319_10040853	3300028563	Rhizosphere	MTATVLARELKSLPEAQRVKIIGATLSELSPAKLKSLERQLRRLAHPEVPEDVWVGFEEAQDGLGTEIKDEHFAQPPR
Ga0265338_102168072	3300028800	Rhizosphere	MTASMLEHELKTLPEAERAQVIGAALLELSPPARKMLERQLRRLAHPEVPEDVWTGFEEAEDGLGIEIRDEHFDHPPV
Ga0311362_109722181	3300029913	Bog	MTADILEQELKTLPEVERAQIIHAALRELSPTALKTLERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0302282_13762832	3300030045	Fen	SICHIKRMTADILEQELKTLPEVERAQIIHAALRELSPTALKTLERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0311370_108855633	3300030503	Palsa	MTASVLEHELKTLPEAERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0302325_115896194	3300031234	Palsa	MTVDILENELKTLPEEERARIIHGALQELSRPTLRVLERQLRRCAHPEVPEDVWIGFEE
Ga0302324_1010332541	3300031236	Palsa	SVTVEILENELETLPEMERARIIGGALQELSPPTLKTLERQLRRCAHPEVPENVWTGFEEAEDGRGIEVRNEHFERPPV
Ga0302324_1011400082	3300031236	Palsa	PPQICHTTGMTADILENELKTLPEAERTRIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFERPPI
Ga0302324_1015185482	3300031236	Palsa	MTADILENELKILPEAERARIIGGALQELSPTTLKSLERQLRRCAHPEVREDVWIGFEEAEDGLGLEVRDEHFERPPV
Ga0265320_102396122	3300031240	Rhizosphere	MTASALERELKSLPEAQRARIIGAAMGELSPSKLKTLERQLRRLARPEVPEDVWVGFEEAQDGLGTEIKDEHF
Ga0265339_104706151	3300031249	Rhizosphere	MTTATLKRELHALPEAERALLIGSALKGLSPASIQALERQVRRLAHPEVPEDVWIGFEEAEAGLGIEIKDGHFANVMA
Ga0265316_108125702	3300031344	Rhizosphere	VAGQNHTRFWLAAHPKIGNINSMTADILENELKSLPETERARIIRGALHELSPRTLKALERQLRRCAHPEVPEDVWTGFEEAE
Ga0302320_1000437526	3300031524	Bog	MQDRSREFRLAPPPQIGNTKTMTADILEIELKTLPETERARIIHGAIQELSPTALKALERQLRRFAHPEIPEDVWIGFEEAEDGKGIEIQDEHFQRPPV
Ga0302320_100500265	3300031524	Bog	MTASMLENELKTLSDSERAKIICAALPDLSPPALKKLERQLRRLTHPNIPEDVWTGFEEAEDGLGIEVRDEHFDQPPV
Ga0302320_102680263	3300031524	Bog	MTVSMLEQELKTLPDLERAKIICAALPELSPAALRKLERQLRRLTHPEVPEDVWIGFEEAEDGLGTEIRDGQFDQPPA
Ga0302326_110041183	3300031525	Palsa	MTVDILENELKTLPEEERARIIHGALQELSRPTLRVLERQLRRCAHPEVPEDVWIGFEEAEDGRGIEVRDDHFEHPPV
Ga0310686_1090438793	3300031708	Soil	LEQELKTLPEVERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0310686_1177155932	3300031708	Soil	ERAQIIRAALQELSPSALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPA
Ga0315282_100563245	3300032069	Sediment	MLENELKTLPEAERAQIIRAALGDLSPAALKVLERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPA
Ga0311301_102891822	3300032160	Peatlands Soil	MTADMLANELKTLPETERARIIRGALQELSPAALKALERQLRRFAHPEVPEDVWIGFEEAEDGLGIEIRDEHFELPPV
Ga0335078_106361103	3300032805	Soil	MKFGCVSEKVTASVLEHELKTLPEAERAQIIRAALRELSPTALKALERQLRKLAHPEVPEDVWTGFAEAEEGRGIEIRDEHFDQPPV
Ga0335073_113918462	3300033134	Soil	MTASTLEQELKTLPEVERAQIIRAALREMSPTALKSLERQVRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0326728_1000187216	3300033402	Peat Soil	MTASTLEHELKALPEAELAQIIRTAMRELSPGALKGLERQLRRLAHPEAPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0326728_100077559	3300033402	Peat Soil	MKADILENELKTLPETERARIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGLGIEIRDEHFERPPV
Ga0326728_100120393	3300033402	Peat Soil	MTSDILENELKTLPEEERTRIIRGALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGQGIEVRDEHFEHPPV
Ga0326728_1002231611	3300033402	Peat Soil	MYLAPPPQICDNNGMRSDILENELKTLPEAERARIIREALQELSPPALKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFEHPPV
Ga0326728_100259977	3300033402	Peat Soil	MTADILENELKTLPETERARIIRGALQELSPPTLKALERQLRRFAHPEVPEDVWTGFEEAEDGRGIEIRDEHFERPPI
Ga0326728_102909104	3300033402	Peat Soil	VPRKRRTALGGTDALGRRVEARYGRLANPASFRHIRRMTASALEHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0326727_101381177	3300033405	Peat Soil	HVTASILEHELKTLPEAERAQIIRAALRELSPTALKALERQLRRLAHPEVPEDVWTGFEEAEEGRGIEIRDEHFDQPPV
Ga0326727_102174732	3300033405	Peat Soil	MTASALEHELKALPEAERAQIIRTAMRELSPGALKGLERQLRRLAHPEVPEDVWTGFEEAEDGRGIEMRDEHFDQPPA
Ga0326727_103195183	3300033405	Peat Soil	MYLAAPTQICDTNGMTSDILENELKSLPEAERTRIIRGALRELSPPAIKTLERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFDHPPV
Ga0326727_111787411	3300033405	Peat Soil	MTSDILENELKTLPEAERTRIIRGALQELSPPALKTLERQLRRFAHPEVPEDVWTGFEEAEDGQGIEVREEHFEH
Ga0334837_087842_320_556	3300033823	Soil	MTVDALENELKTLPEADRTRIIRGALRALSPAAMRTLERQLRRFAHPEVPEDVWTGFEEAEDGRGIEVRDEHFERPPI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences