Metagenome / Metatranscriptome Family F094763

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094763
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	53 residues
Representative Sequence	EGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKAGI
Number of Associated Samples	87
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.00 %
% of genes near scaffold ends (potentially truncated)	83.81 %
% of genes from short scaffolds (< 2000 bps)	83.81 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (56.190 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.952 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.54% β-sheet: 25.61% Coil/Unstructured: 65.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03976	PPK2	16.19
PF00690	Cation_ATPase_N	12.38
PF09364	XFP_N	3.81
PF02482	Ribosomal_S30AE	1.90
PF00924	MS_channel	1.90
PF03699	UPF0182	1.90
PF00999	Na_H_Exchanger	1.90
PF00654	Voltage_CLC	1.90
PF11897	DUF3417	1.90
PF05239	PRC	1.90
PF00702	Hydrolase	0.95
PF02874	ATP-synt_ab_N	0.95
PF13007	LZ_Tnp_IS66	0.95
PF09851	SHOCT	0.95
PF02518	HATPase_c	0.95
PF03965	Penicillinase_R	0.95
PF03446	NAD_binding_2	0.95
PF00266	Aminotran_5	0.95
PF01609	DDE_Tnp_1	0.95
PF03332	PMM	0.95
PF00274	Glycolytic	0.95
PF10415	FumaraseC_C	0.95
PF04041	Glyco_hydro_130	0.95
PF14520	HHH_5	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	16.19
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	12.38
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	1.90
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.90
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.90
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.90
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.90
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	1.90
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	1.90
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.90
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.90
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.95
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.95
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.95
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.95
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.95
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.95
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.95
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.95
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.95
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
All Organisms	root	All Organisms	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
cellular organisms	root	All Organisms → cellular organisms	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.76 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.48 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	1.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.95 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.95 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.48 %
Zoogloeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae	1.90 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.95 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.95 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	4.76 %
Uliginosibacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium	1.90 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	0.95 %
Chromobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group	0.95 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.86 %
Uliginosibacterium gangwonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense	1.90 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.95 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	0.95 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.95 %
Chromobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.57 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2.86 %
Uliginosibacterium gangwonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense	1.90 %
Rhizobacter sp. Root404	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	0.95 %
Chromobacterium sphagni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → Chromobacterium sphagni	0.95 %
Pseudonocardia bannensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia bannensis	0.95 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009519\|Ga0116108_1165439	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009618\|Ga0116127_1117820	Not Available	685	Open in IMG/M
3300009623\|Ga0116133_1001035	All Organisms → cellular organisms → Bacteria	8327	Open in IMG/M
3300009628\|Ga0116125_1071166	Not Available	904	Open in IMG/M
3300009629\|Ga0116119_1052999	Not Available	1048	Open in IMG/M
3300009641\|Ga0116120_1037927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1691	Open in IMG/M
3300009641\|Ga0116120_1051055	Not Available	1422	Open in IMG/M
3300009762\|Ga0116130_1270437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	542	Open in IMG/M
3300009764\|Ga0116134_1207188	Not Available	681	Open in IMG/M
3300010379\|Ga0136449_104035097	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300010379\|Ga0136449_104071461	Not Available	545	Open in IMG/M
3300010379\|Ga0136449_104218250	Not Available	533	Open in IMG/M
3300014152\|Ga0181533_1013944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	5742	Open in IMG/M
3300014152\|Ga0181533_1228396	Not Available	704	Open in IMG/M
3300014158\|Ga0181521_10185816	Not Available	1153	Open in IMG/M
3300014159\|Ga0181530_10355891	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300014165\|Ga0181523_10263220	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300014490\|Ga0182010_10626213	Not Available	602	Open in IMG/M
3300014490\|Ga0182010_10869080	Not Available	513	Open in IMG/M
3300014491\|Ga0182014_10015340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6973	Open in IMG/M
3300014491\|Ga0182014_10020516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	5619	Open in IMG/M
3300014491\|Ga0182014_10325671	Not Available	782	Open in IMG/M
3300014491\|Ga0182014_10520299	Not Available	581	Open in IMG/M
3300014491\|Ga0182014_10564866	Not Available	553	Open in IMG/M
3300014492\|Ga0182013_10521851	Not Available	615	Open in IMG/M
3300014498\|Ga0182019_10074113	Not Available	2026	Open in IMG/M
3300014498\|Ga0182019_11206514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300014654\|Ga0181525_10432115	Not Available	725	Open in IMG/M
3300014839\|Ga0182027_10449165	Not Available	1420	Open in IMG/M
3300014839\|Ga0182027_10543262	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300016705\|Ga0181507_1289328	Not Available	506	Open in IMG/M
3300016750\|Ga0181505_10774467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia bannensis	521	Open in IMG/M
3300017935\|Ga0187848_10430736	Not Available	542	Open in IMG/M
3300017938\|Ga0187854_10131973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300017940\|Ga0187853_10480120	Not Available	544	Open in IMG/M
3300017948\|Ga0187847_10432382	Not Available	725	Open in IMG/M
3300017988\|Ga0181520_10269791	Not Available	1290	Open in IMG/M
3300017988\|Ga0181520_10382376	Not Available	1026	Open in IMG/M
3300018009\|Ga0187884_10157615	Not Available	954	Open in IMG/M
3300018014\|Ga0187860_1346619	Not Available	566	Open in IMG/M
3300018016\|Ga0187880_1187694	Not Available	945	Open in IMG/M
3300018033\|Ga0187867_10806236	Not Available	509	Open in IMG/M
3300018038\|Ga0187855_10128817	Not Available	1517	Open in IMG/M
3300018038\|Ga0187855_10267206	Not Available	1003	Open in IMG/M
3300018043\|Ga0187887_10188218	Not Available	1229	Open in IMG/M
3300018043\|Ga0187887_10757755	Not Available	574	Open in IMG/M
3300018043\|Ga0187887_10938101	Not Available	512	Open in IMG/M
3300018044\|Ga0187890_10374596	Not Available	798	Open in IMG/M
3300018057\|Ga0187858_10491858	Not Available	751	Open in IMG/M
3300019082\|Ga0187852_1352131	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300019787\|Ga0182031_1203532	Not Available	895	Open in IMG/M
3300022524\|Ga0224534_1002023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9970	Open in IMG/M
3300022830\|Ga0224515_1050117	Not Available	575	Open in IMG/M
3300023088\|Ga0224555_1087458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1006	Open in IMG/M
3300023090\|Ga0224558_1157213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	723	Open in IMG/M
3300023090\|Ga0224558_1171139	Not Available	678	Open in IMG/M
3300025857\|Ga0209014_10024974	All Organisms → cellular organisms → Bacteria	2823	Open in IMG/M
3300025878\|Ga0209584_10160719	Not Available	849	Open in IMG/M
3300026451\|Ga0247845_1064795	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300028070\|Ga0255353_1003306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	7333	Open in IMG/M
3300028090\|Ga0255349_1100034	Not Available	523	Open in IMG/M
3300028566\|Ga0302147_10254688	Not Available	585	Open in IMG/M
3300028572\|Ga0302152_10203136	Not Available	641	Open in IMG/M
3300028574\|Ga0302153_10058666	Not Available	1293	Open in IMG/M
3300028745\|Ga0302267_10043113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → Chromobacterium sphagni	2648	Open in IMG/M
3300028766\|Ga0302269_1056653	Not Available	1205	Open in IMG/M
3300028779\|Ga0302266_10114579	Not Available	1085	Open in IMG/M
3300028781\|Ga0302223_10319166	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300028783\|Ga0302279_10259911	Not Available	782	Open in IMG/M
3300028860\|Ga0302199_1004256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	6571	Open in IMG/M
3300028867\|Ga0302146_10330230	Not Available	587	Open in IMG/M
3300028873\|Ga0302197_10034921	All Organisms → cellular organisms → Bacteria	3024	Open in IMG/M
3300029883\|Ga0311327_10102437	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	2108	Open in IMG/M
3300029883\|Ga0311327_10214326	Not Available	1306	Open in IMG/M
3300029911\|Ga0311361_11206716	Not Available	604	Open in IMG/M
3300029914\|Ga0311359_11142424	Not Available	514	Open in IMG/M
3300029915\|Ga0311358_10399905	Not Available	1111	Open in IMG/M
3300029918\|Ga0302143_1040290	Not Available	1072	Open in IMG/M
3300029982\|Ga0302277_1161292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense	909	Open in IMG/M
3300029988\|Ga0302190_10263045	Not Available	686	Open in IMG/M
3300030004\|Ga0302186_10331540	Not Available	505	Open in IMG/M
3300030011\|Ga0302270_10334589	Not Available	823	Open in IMG/M
3300030044\|Ga0302281_10349881	Not Available	579	Open in IMG/M
3300030503\|Ga0311370_10407252	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300031241\|Ga0265325_10427360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. Root404	578	Open in IMG/M
3300031261\|Ga0302140_10477805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Uliginosibacterium → Uliginosibacterium gangwonense	975	Open in IMG/M
3300031788\|Ga0302319_10755208	Not Available	973	Open in IMG/M
3300031788\|Ga0302319_11121125	Not Available	736	Open in IMG/M
3300032676\|Ga0316229_1168358	Not Available	877	Open in IMG/M
3300033004\|Ga0335084_11272453	Not Available	733	Open in IMG/M
3300033402\|Ga0326728_10347885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300033405\|Ga0326727_11135102	Not Available	552	Open in IMG/M
3300033818\|Ga0334804_141336	Not Available	601	Open in IMG/M
3300033822\|Ga0334828_051248	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300033887\|Ga0334790_210665	Not Available	553	Open in IMG/M
3300033888\|Ga0334792_129482	Not Available	663	Open in IMG/M
3300033891\|Ga0334811_189079	Not Available	500	Open in IMG/M
3300034065\|Ga0334827_145570	Not Available	741	Open in IMG/M
3300034163\|Ga0370515_0142965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1026	Open in IMG/M
3300034282\|Ga0370492_0312348	Not Available	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.10%
Host-Associated	Host-Associated	1.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.86%
Aquatic	Environmental → Aquatic	35.24%
Plants	Host-Associated → Plants	1.90%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	42.86%
Freshwater	Environmental → Aquatic → Freshwater	35.24%
Soil	Environmental → Terrestrial → Soil	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	42.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	34.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	4.76%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	42.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.90%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.95%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	22.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	17.14%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	14.29%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.57%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	6.67%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	5.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.86%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026451	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25	Environmental	Open in IMG/M
3300028070	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T25	Environmental	Open in IMG/M
3300028090	Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T-25.v15	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028572	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_1	Environmental	Open in IMG/M
3300028574	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_2	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028766	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_2	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028867	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033818	Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-M	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116108_11654391	3300009519	Peatland	MVGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHQTKAGI*
Ga0116127_11178201	3300009618	Peatland	MLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLYHTKTGI*
Ga0116133_10010351	3300009623	Peatland	LEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHMKAGI*
Ga0116125_10711661	3300009628	Peatland	IMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGL*
Ga0116119_10529992	3300009629	Peatland	FVMDEASWHLGYLDVKSGDWLHNRSVLVPTGWVQSVSWPDFRVYLDHMKAGI*
Ga0116120_10379273	3300009641	Peatland	AVWHIGYLDVKTGDWLQSRSALVPTSWVKSISWADHRVILQHARERI*
Ga0116120_10510553	3300009641	Peatland	RLEGFIMDEASWHLGYLEVKTGDWLNGRSVLVPTRWVKSVFWDDHRVSLHHTRAGV*
Ga0116130_12704371	3300009762	Peatland	ASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI*
Ga0116134_12071882	3300009764	Peatland	EGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI*
Ga0136449_1040350972	3300010379	Peatlands Soil	SWHLGYLDVKAGDWLHSRSVLVPTRWVNSVSWADHRVNLHHAQERI*
Ga0136449_1040714611	3300010379	Peatlands Soil	VAWHLGYLDVKAGDWLYNRSVLVPTRWVHSVSWADRRVNLDHAQT*
Ga0136449_1042182501	3300010379	Peatlands Soil	MLGYHVWASDGEFGVLEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTSWVQSVSWADFRVHLHHTKAGM*
Ga0181533_10139441	3300014152	Bog	GFVMDEASWHLGYLDVKSGDWLKNRSVLVPTRWVQSVSWTEFRIHLHHTKTGI*
Ga0181533_12283961	3300014152	Bog	MDDASWHLGYLDVKAGDWLYSRSVLVPTRWVKSISWADRRVNLHHTQGAL*
Ga0181521_101858161	3300014158	Bog	LEGLIMDEASWHLGYLDVKAGDWLRNRSVLIPTLWVNSVSWADCRINLHHSRDGI*
Ga0181530_103558911	3300014159	Bog	HIGYLDVKAGDWLHSRSVLVPTRWVESISWADDRVHLHHTPEKA*
Ga0181523_102632201	3300014165	Bog	EASWHLGYLDVKSGDWLQNRSVLVPTDWVQSVSWPDFRVYLDHTKAGI*
Ga0181528_100418121	3300014167	Bog	KAGDWLHSRSVLVPTRWVKSISWADNRISLNHSLKEG*
Ga0182010_106262131	3300014490	Fen	FGILDDFVMDELSWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA*
Ga0182010_108690802	3300014490	Fen	VVDDAVWHIGYLDVKTGEGLESRSVLVPTSWVKSISWADHRVNLQGSRERI*
Ga0182014_100153401	3300014491	Bog	LEGFIMNDASWHLAYLDVTAGDWLHNRPVLVPTSSVTFVSWANHRVNLQQARERI*
Ga0182014_100205166	3300014491	Bog	MDEASWHLGYVDVKAGDWLLSRSVLIPTHWVKSISWANLRINLHHSRDGI*
Ga0182014_103256713	3300014491	Bog	EASWHLGYLDVKTGDWLHGRSVLIPTRWVKSISWADLKINLHHSRDGI*
Ga0182014_105202992	3300014491	Bog	ASWHLGYLDVKAGDWLLNRSVLIPTRWVKSVSWADLRINLHHSREGI*
Ga0182014_105648661	3300014491	Bog	WHLGYLDVKAGDWLLGRSVLIPTRWVKSISWANLRINLHHTKDGI*
Ga0182013_105218512	3300014492	Bog	GYLDVKTGDWLHGRSVLIPTRWVKSISWADLKINLHHSRDGI*
Ga0182019_100741133	3300014498	Fen	MDEASWRLGYLDVKAGDWLLNRSVLVPTLWVKSVSWADCRINLHHSRDVI*
Ga0182019_112065142	3300014498	Fen	WDLAGYEVWDTNGEFGRLEGFIMDEASWHLGYLDVKAGDWLNSRSVLVPTRWVNSVSWADHRVNLQQARERI*
Ga0181525_104321151	3300014654	Bog	MLGYQVWATDGDFGILEGFVMDEASWHLGYLDVKSGVWLQNRSVLVPTRWVQSVSWADFRVNLHHTNPGI*
Ga0182027_104491652	3300014839	Fen	MDDASWHLGYLDVKAGDWLYSRSVLVPTRWVKSISWADRRVNVHHAQGAL*
Ga0182027_105432621	3300014839	Fen	GFIVDDASWHLGYLDVKTGDWLHSRSVLVPTRSVESISWAHRRVDLKKETRERI*
Ga0181507_12893281	3300016705	Peatland	GEFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0181505_107744672	3300016750	Peatland	EIGRVEGFIMDDASWHLGYLDVKAGDWFHNRSVLVPTRWVNSVSWADHRVNLHHAQA
Ga0187848_104307361	3300017935	Peatland	ATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187854_101319733	3300017938	Peatland	ASWHLGYLEVKTGEWLHSRSLLVPTRWVKSVSWANRRVNLHHTREGV
Ga0187853_104801202	3300017940	Peatland	VWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHQTKAGI
Ga0187847_104323822	3300017948	Peatland	GILEGFVMDEASWHLGYLDVRSGDWLHNRSVLIPTRSVESVSWAEFRIQLHHTKVGTEVERELDPAAISREGIERNLQNGY
Ga0181520_102697912	3300017988	Bog	DGDFGILEGFVLDEASWHLGYLDVKSGYWLQNRSVLVPTRWVESVSWAEFRIHLHDTKAG
Ga0181520_103823763	3300017988	Bog	MGRLEGFIMDEASWHLGYLEVKTGDWLNDRSVLVPTRWVKSVFWDDHRVSLHHTRAGV
Ga0187884_101576152	3300018009	Peatland	GFIMDDASWHLGYLDVKAGEWIFSRSVLVPTRWVKSISWADRRVNLHHTQGAL
Ga0187860_13466191	3300018014	Peatland	GFIMNDASWHLAYLDVTAGDWLHNRPVLVPTSSVTFVSWADHRVNLQRARERI
Ga0187880_11876941	3300018016	Peatland	HVWATDGDFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187867_108062361	3300018033	Peatland	FIMDDASWHLGYLNVKAGDWLYSRSVLVPTRWVKSISWADRRVNLHHTQVAFKAP
Ga0187855_101288173	3300018038	Peatland	SWHLGYLEVKTGDWLNGRSVLVPTRWVKSVFWDDHRVSLHHTRAGV
Ga0187855_102672062	3300018038	Peatland	EGFVMDEASWHLGYLDVKSGGWLQNRSVLVPTRWVQSVSWADFRVNLHHTKAGI
Ga0187887_101882182	3300018043	Peatland	SHMLGYQVWATDGDFGTLEGFVMDEASWHLGYLDVRSGDWLHNRSVLVPTRWVQSVSWAEFRIHLHHTKAGT
Ga0187887_107577552	3300018043	Peatland	YHVWATDGDFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVESVSWAEFRIQLHRTKAGTEVERELHPIEHL
Ga0187887_109381012	3300018043	Peatland	GRVEGFIMDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0187890_103745963	3300018044	Peatland	GRVEGFIMDDASWHLGYLDVKAGDWLHSRSVLVPTRWVNSVSWADHRVNLHHAQA
Ga0187858_104918581	3300018057	Peatland	SWHLGYLDVKAGDWLHNRSVLIPTRWVNSVSWADHRVNLHHAQA
Ga0187852_13521312	3300019082	Peatland	EFGILEGFVMDEASWHLGYLDVRGGDWLHNRSVLIPTRWVQSVSWAEFRIHLHHTKAGT
Ga0182031_12035321	3300019787	Bog	GLIMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0224534_10020234	3300022524	Soil	MDEASWHLGYVDVKAGDWLLSRSVLIPTHWVKSISWANLRINLHHSRDGI
Ga0224515_10501171	3300022830	Soil	LEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWIQSVSWADFRVNLHQTKAGI
Ga0224555_10874581	3300023088	Soil	RLEGFVLDEAPWHLAYLDVKAGDWLLCRSVLIPTRWAQSISWANHRVNLHHTRKGV
Ga0224558_11572131	3300023090	Soil	HLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI
Ga0224558_11711391	3300023090	Soil	YLDVKAGEWIFSRSVLVPTRWVKSISWADRRVNLHHTQGAL
Ga0224535_10945571	3300023258	Soil	LDVKAGDWLLNRSVLIPTRWVKSVSWADLRINLHHSREGI
Ga0209014_100249744	3300025857	Arctic Peat Soil	MDDASWHLGYLDVKAGDWLNSRSVLVPTRWVNSISWAEHRVNLHHAQERI
Ga0209584_101607192	3300025878	Arctic Peat Soil	HLLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQSRSVLVPTRWVQSVSWTEFRIHLHHTKGGT
Ga0247845_10647952	3300026451	Soil	VMDEASWHLGYLDVKSGDWLQNRSVLVPTRWIQSVSWADFRVNLHQTKAGI
Ga0255353_10033061	3300028070	Soil	DEASWHLGYLDVKCGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPMV
Ga0255349_11000342	3300028090	Soil	EDFVMDEASWHLGYLDVKSGSSLQNRSVLVPTRWVESVSWTEFRIHLHHTRTA
Ga0302147_102546881	3300028566	Bog	WHLGYLDVKSGDWLHNRSVLVPTGWVESVSWADFVIQLHHLMA
Ga0302152_102031362	3300028572	Bog	LEGFVMDEASWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0302153_100586663	3300028574	Bog	LGYLDVKAGDWLLTRSVLIPTRWVKSVSWADCRVNLHHGKDGI
Ga0302267_100431131	3300028745	Bog	IMDEASWHLGYLDVKAGDWLHSRSMLIPTRSVKSISWADHRVNLHHSRDGI
Ga0302269_10566534	3300028766	Bog	SLILDEATWHLGYLDVKAGDWLLCRSVLIPTRWIESVSWADCRINLHHCRDGI
Ga0302266_101145791	3300028779	Bog	LEGFVMDEDSWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0302223_103191662	3300028781	Palsa	RLQGFIMDESSWNLGYLEVKAGDWLHCRSVLIPTSWVESVSQANHRVNLHRTCTEV
Ga0302279_102599111	3300028783	Bog	LGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302199_10042561	3300028860	Bog	SHMLGYHVWATDGDFGMLEGFVMDEADWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRINLHHTRAGI
Ga0302146_103302302	3300028867	Bog	IMDEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302197_100349211	3300028873	Bog	DGEVGRVEGFIMDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0311327_101024371	3300029883	Bog	GILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI
Ga0311327_102143262	3300029883	Bog	DEASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0311361_112067161	3300029911	Bog	ATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPM
Ga0311359_111424242	3300029914	Bog	ASWHLGYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLHHSRDGI
Ga0311358_103999052	3300029915	Bog	DFVVDEASWHLGYLDVKSGDWLQNRSVLVPTSLVQSVSWADFRIHLHHTRAGI
Ga0302143_10402901	3300029918	Bog	FVMDEASWHLGYLDVKSGDWLRNRSVLVPTRWVQSVSWADFVVQLHHSMA
Ga0311346_114223852	3300029952	Bog	AGDWLLGRSVLIPTRWVKSISWANLRINLHHSKDGI
Ga0302277_11612922	3300029982	Bog	DEASWHLGYLDVKGGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHTKTGI
Ga0302190_102630451	3300029988	Bog	GYLDVKAGDWLHGRSMLIPTRWVKSISWADLRIDLYHTRDGI
Ga0302283_13414101	3300029994	Fen	GDWLRDRSVLIPTRWVESVSWADRRVNVQHSRSGL
Ga0302186_103315402	3300030004	Bog	ILEGFVMDETSWHLGYLDVKSGDWLRSRSVLVPTRWVQSVSWTEFRIHLHHTKAGT
Ga0302270_103345892	3300030011	Bog	GLIMDEASWHLGYLDVKAGDWLHSRSMLIPTRSVKSISWADHRVNLHHSRDGI
Ga0302281_103498812	3300030044	Fen	STSHMLGYHVWATDGDFGILEGFVMDEASWHLGYLDVKSGDWLQNRSVLVPTGWVQSVSWADFVIQLHHPMA
Ga0311370_104072523	3300030503	Palsa	VMDEATWHLAYLDVKSGDWLQNRSVLAPTGWVRSVSWPDFRVYLDHTKAGIWASGFP
Ga0265325_104273601	3300031241	Rhizosphere	RSVWHLTGYDVWAPEIEIGRLEGFVMDDASWHLSYLDVKAGDWLHSRSVLVPTRWVKYISWAEHRVHLERGRGHI
Ga0302140_104778051	3300031261	Bog	LEGFVMDEASWHLGYLDVKGGDWLQNRSVLVPTGWVQSVSWPDFRVYLDHTKTGI
Ga0265316_104016382	3300031344	Rhizosphere	AGDWLHGRSVLIPTRWVKSISWADLKINLNHSRDGI
Ga0302319_107552082	3300031788	Bog	FVMDEASWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFVIQLHHPMA
Ga0302319_111211251	3300031788	Bog	FVLDEASWHLGYLEVKAGEWLLCHSVLVPTRWVKSVSWADHRVNLHHTRKGV
Ga0316229_11683581	3300032676	Freshwater	WHLGYLEVKAGEWLHSHSLLVPTRWVKSISWANRRVNLHHTREGV
Ga0335084_112724531	3300033004	Soil	FIVDETSWHLGYLDVKAGDWLYSRSVLIPTQWVKSISWADHRVNLRRTSKA
Ga0326728_103478852	3300033402	Peat Soil	FVVDDAVWHIGYLDVKTGEGLQSRSVLVPTSWVKSISWADHHVNLQGSRERI
Ga0326727_111351021	3300033405	Peat Soil	LEGLIMDEASWHLGYLDVKAGDWLHSRSMLIPTRWVKSISWADLRINLHHSREEI
Ga0334804_141336_436_588	3300033818	Soil	MDEASWHLGYLDVKAGDWLHGRSVLIPTRWVKSISWADLRINLHHSRDGI
Ga0334828_051248_986_1132	3300033822	Soil	MDDASWHLGYLDVKAGDWLHNRSVLVPTRWVNSVSWANHRVNLHHAQA
Ga0334790_210665_361_552	3300033887	Soil	GRVDGFIMDDASWHLGYLDVKAGDWLHSRSILVPTRWVNSVSWADHRVNLHHTQAWTGTLKAS
Ga0334792_129482_8_178	3300033888	Soil	MDDASWHLGYLDVKSGDWLHSRSVLVPTCWVNSVSWADHRVNLHRAQAWTGTLKAS
Ga0334811_189079_355_498	3300033891	Soil	ASWHLGYLDVKAGDWLLGRSVLIPTRWVKSISWANLRINLHHSKDGI
Ga0334827_145570_510_722	3300034065	Soil	MLGYHVWATDGDFGMLEGFVMDEADWHLGYLDVKSGDWLQNRSVLVPTRWVQSVSWADFRINLHHTRAGI
Ga0370515_0142965_1_159	3300034163	Untreated Peat Soil	FVMDEASWHLGYLDVKSGAWLQNRSVLVPTRWVQSVSWADFRVNLHHTKTGI
Ga0370492_0312348_411_563	3300034282	Untreated Peat Soil	MDEASWHLGYLDVKAGDWLQSRSVLIPTRWVKSISWADLRINLHHSRDGI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094763

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences