Metagenome / Metatranscriptome Family F094758

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094758
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	43 residues
Representative Sequence	PEQNRGIFYWAVVDIRTKPLESSEAGILNAVRERPVLVGTAQN
Number of Associated Samples	92
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	93.33 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.333 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (12.381 % of family members)
Environment Ontology (ENVO)	Unclassified (35.238 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.68% β-sheet: 18.31% Coil/Unstructured: 69.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF02357	NusG	83.81
PF10531	SLBB	3.81
PF02563	Poly_export	1.90
PF02397	Bac_transf	0.95
PF13620	CarboxypepD_reg	0.95
PF00982	Glyco_transf_20	0.95
PF13439	Glyco_transf_4	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	83.81
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.95
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.33 %
Unclassified	root	N/A	6.67 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.62 %
Unclassified	root	N/A	6.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	24.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.48 %
Unclassified	root	N/A	6.67 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.48 %
Unclassified	root	N/A	6.67 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.48 %
Unclassified	root	N/A	6.67 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.76 %
Unclassified	root	N/A	6.67 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.90 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	0.95 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	24.76 %
Unclassified	root	N/A	6.67 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.95 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.95 %
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	0.95 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10004793	All Organisms → cellular organisms → Bacteria → Acidobacteria	9550	Open in IMG/M
3300004091\|Ga0062387_101116018	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300004092\|Ga0062389_100402250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1488	Open in IMG/M
3300005436\|Ga0070713_100310631	All Organisms → cellular organisms → Bacteria → Acidobacteria	1454	Open in IMG/M
3300005542\|Ga0070732_10404275	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300005591\|Ga0070761_10480674	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300005591\|Ga0070761_11083093	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005921\|Ga0070766_10369524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300005921\|Ga0070766_10674095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300006028\|Ga0070717_11378854	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300006050\|Ga0075028_100801200	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300006086\|Ga0075019_11076474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300009521\|Ga0116222_1297567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009522\|Ga0116218_1054082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1821	Open in IMG/M
3300009624\|Ga0116105_1148283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300009631\|Ga0116115_1063858	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300009634\|Ga0116124_1102706	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	808	Open in IMG/M
3300009759\|Ga0116101_1191315	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300009764\|Ga0116134_1020429	All Organisms → cellular organisms → Bacteria → Acidobacteria	2705	Open in IMG/M
3300009824\|Ga0116219_10164219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1280	Open in IMG/M
3300009839\|Ga0116223_10022896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4364	Open in IMG/M
3300009839\|Ga0116223_10076533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2142	Open in IMG/M
3300010341\|Ga0074045_10364431	Not Available	941	Open in IMG/M
3300010360\|Ga0126372_10971553	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300010379\|Ga0136449_101655238	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300012925\|Ga0137419_11873780	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300014200\|Ga0181526_10617180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300014489\|Ga0182018_10053520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2461	Open in IMG/M
3300014494\|Ga0182017_10032648	All Organisms → cellular organisms → Bacteria → Acidobacteria	3535	Open in IMG/M
3300014498\|Ga0182019_10115335	All Organisms → cellular organisms → Bacteria → Acidobacteria	1662	Open in IMG/M
3300014638\|Ga0181536_10507435	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300014654\|Ga0181525_10683453	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300014657\|Ga0181522_10057415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2199	Open in IMG/M
3300014657\|Ga0181522_10615843	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300017822\|Ga0187802_10444417	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300017936\|Ga0187821_10154999	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300017936\|Ga0187821_10504060	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300017966\|Ga0187776_10389019	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300017970\|Ga0187783_11151663	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300017972\|Ga0187781_11345305	Not Available	527	Open in IMG/M
3300017975\|Ga0187782_11510799	Not Available	529	Open in IMG/M
3300017995\|Ga0187816_10319449	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300018003\|Ga0187876_1250055	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300018017\|Ga0187872_10379950	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300018038\|Ga0187855_10648705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300018043\|Ga0187887_10240250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300018086\|Ga0187769_11228070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300019284\|Ga0187797_1027596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300021181\|Ga0210388_10769095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300021432\|Ga0210384_10030856	All Organisms → cellular organisms → Bacteria	5015	Open in IMG/M
3300021433\|Ga0210391_10440351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300021477\|Ga0210398_10254865	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300022531\|Ga0242660_1000495	All Organisms → cellular organisms → Bacteria	4309	Open in IMG/M
3300022531\|Ga0242660_1199843	Not Available	549	Open in IMG/M
3300022722\|Ga0242657_1180752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300025453\|Ga0208455_1021000	All Organisms → cellular organisms → Bacteria → Acidobacteria	1562	Open in IMG/M
3300025928\|Ga0207700_11827468	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300026514\|Ga0257168_1115983	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300027559\|Ga0209222_1066158	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300027567\|Ga0209115_1015036	All Organisms → cellular organisms → Bacteria → Acidobacteria	1683	Open in IMG/M
3300027570\|Ga0208043_1010555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3089	Open in IMG/M
3300027609\|Ga0209221_1084388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300027783\|Ga0209448_10243029	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300027854\|Ga0209517_10076916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2339	Open in IMG/M
3300027869\|Ga0209579_10083933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1686	Open in IMG/M
3300027898\|Ga0209067_10404439	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300027905\|Ga0209415_10484272	Not Available	960	Open in IMG/M
3300027911\|Ga0209698_10092120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	2549	Open in IMG/M
3300028789\|Ga0302232_10550106	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300029701\|Ga0222748_1107067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300029883\|Ga0311327_10126321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1842	Open in IMG/M
3300029914\|Ga0311359_10983346	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300029939\|Ga0311328_10033987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4705	Open in IMG/M
3300029939\|Ga0311328_10076887	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2858	Open in IMG/M
3300029944\|Ga0311352_10668950	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300029954\|Ga0311331_11640612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300030044\|Ga0302281_10124279	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300030057\|Ga0302176_10000472	All Organisms → cellular organisms → Bacteria	24209	Open in IMG/M
3300030520\|Ga0311372_11455251	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300030618\|Ga0311354_11463305	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300030659\|Ga0316363_10093610	All Organisms → cellular organisms → Bacteria → Acidobacteria	1344	Open in IMG/M
3300030888\|Ga0265769_105101	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300031234\|Ga0302325_10897929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300031446\|Ga0170820_10397519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300031525\|Ga0302326_10105115	All Organisms → cellular organisms → Bacteria → Acidobacteria	5036	Open in IMG/M
3300031525\|Ga0302326_10127262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4458	Open in IMG/M
3300031525\|Ga0302326_11261669	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300031708\|Ga0310686_107305765	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300031718\|Ga0307474_10013839	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	5835	Open in IMG/M
3300031823\|Ga0307478_10227609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1508	Open in IMG/M
3300031823\|Ga0307478_11253465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300032001\|Ga0306922_11265894	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300032160\|Ga0311301_11110346	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300032180\|Ga0307471_101493957	All Organisms → cellular organisms → Bacteria → Acidobacteria	834	Open in IMG/M
3300032261\|Ga0306920_101468158	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300032805\|Ga0335078_11737123	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300032893\|Ga0335069_10231665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2231	Open in IMG/M
3300032893\|Ga0335069_10255217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2106	Open in IMG/M
3300033158\|Ga0335077_11569437	All Organisms → cellular organisms → Bacteria → Acidobacteria	627	Open in IMG/M
3300033433\|Ga0326726_11250862	Not Available	722	Open in IMG/M
3300033820\|Ga0334817_044473	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300033887\|Ga0334790_181437	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300034282\|Ga0370492_0228958	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300034282\|Ga0370492_0441390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	24.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.10%
Freshwater	Environmental → Aquatic → Freshwater	20.95%
Peat	Environmental → Terrestrial → Peat	17.14%
Sediment	Environmental → Aquatic → Sediment	3.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.95%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.24%
Loam	Environmental → Terrestrial → Soil → Loam	9.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.86%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.76%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.90%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.90%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.90%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.95%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.95%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030044	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033820	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-D	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100047936	3300000567	Peatlands Soil	MKILALAPEQNRGSFYWAIVDVRTKPLGNSEARILSALRERPSLVGTVSN*
Ga0062387_1011160181	3300004091	Bog Forest Soil	PEQNTGIFYWAFVDIRTKPLESSEAGILNAVRERPVLVGAARN*
Ga0062389_1004022503	3300004092	Bog Forest Soil	APEHNRGVFYWAVVDVRTKPLESSEAGILSALRERPSVVGAVHH*
Ga0070713_1003106311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EQNRALFYWASVDIRSKPLESSEDGILGAMRQLAPMVGVVPV*
Ga0070732_104042752	3300005542	Surface Soil	LFYWASVDIRSKPLESSEDGILGAMRQLAPTVGVVRV*
Ga0070761_104806741	3300005591	Soil	YWASIDIRTKPVESSEAGILNAVRERPLLVGAAQN*
Ga0070761_110830931	3300005591	Soil	WAVVDVRTKPLESSEAGILSALRDRPSLVGTVHN*
Ga0070766_103695241	3300005921	Soil	EKNRGLFYWATVDVRTKPLESSEAGLLSALRERPSLVGTTII*
Ga0070766_106740951	3300005921	Soil	WAVVDIRTKALESSEAGILNAVRERPILVGAAQN*
Ga0070717_113788541	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ALAPDQNRALFFWAIVDIRSKSLESSEAGILDAMRQQAPVVGLARI*
Ga0075028_1008012002	3300006050	Watersheds	ILALAPEQNRALFYWAIVDVRSKPLESSENGILNAMRQAAPVVGLARV*
Ga0075019_110764741	3300006086	Watersheds	APEQNTGIFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAARN*
Ga0116222_12975672	3300009521	Peatlands Soil	VFYWAIVDVRTKPLESSEAGILSALRDHPSLVGTVRN*
Ga0116218_10540823	3300009522	Peatlands Soil	ALAPEQNRGVFYWAIVDVRTKPLESSEAGILSALRDHPSLVGTVRN*
Ga0116105_11482832	3300009624	Peatland	FYWAAVDIRTKPLESSEAGILSALRDFPSRVGTTTN*
Ga0116115_10638583	3300009631	Peatland	YWAVVDIRTKALESSEAGILNAVRERPILVGTAQN*
Ga0116124_11027061	3300009634	Peatland	EENRGTIYWAIVDVRTRPLESSEAGILSALRERPSLVGTLRS*
Ga0116101_11913152	3300009759	Peatland	WASIDIRTKPVESSEAGILNAVRERPLLVGAVQN*
Ga0116134_10204291	3300009764	Peatland	NLGIFYWAIIDIRTKPLESSEAGILNAVRERPVLLGAAQN*
Ga0116219_101642191	3300009824	Peatlands Soil	ILALAPEQNRALFYWAIVDIRSKPLESSEAGILNAVRQRAPSVGLTPV*
Ga0116223_100228961	3300009839	Peatlands Soil	EQNRALFYWAIVDIRSKPLESSEAGILNAVRQRAPSVGLTPV*
Ga0116223_100765333	3300009839	Peatlands Soil	GVFYWAIVDVRTKPLESSEAGILSALRDHPSLVGTVRN*
Ga0074045_103644312	3300010341	Bog Forest Soil	EKNRGMFYWATVEVRTKPLESSEAGILSALRDRPSLVGAVHT*
Ga0126372_109715532	3300010360	Tropical Forest Soil	YWAIVDIRSKPLESSEAGILDAMRQRSQVVGLARI*
Ga0136449_1016552381	3300010379	Peatlands Soil	QNRALFYWAIVDIRSKPLESSEAGILNAVRQRASSVGLTPV*
Ga0137419_118737802	3300012925	Vadose Zone Soil	WAIVDVRSKPLESSEAGILSALRESPSLVGAVHH*
Ga0181526_106171802	3300014200	Bog	ALAPEENRGVFYWATVDVRTKPLISSEAGILSALRERPSLVGTVHT*
Ga0182018_100535203	3300014489	Palsa	YWAIVDIRSKPVQSSEAGILSALRDAPMLVGAVRV*
Ga0182017_100326484	3300014494	Fen	WAIVDVRMKPLESSESGILSALRERPSLVGTLHS*
Ga0182019_101153353	3300014498	Fen	EENRGTIYWAIVDVRMKPLESSESGILSALRERPSLVGTLHS*
Ga0181536_105074351	3300014638	Bog	QNRGLFYWAFVDVRSKALESSEAGILNALREHPSVVGMLQN*
Ga0181525_106834532	3300014654	Bog	APEQNRGLFYWAVVDIRTKALESSEAGILNAVRERPVLVGAAQN*
Ga0181522_100574153	3300014657	Bog	GRYPQMKILALAPEQNRGMLFWTIVNIRTNPVESSTAGILGALRDAPSIVGTVRI*
Ga0181522_106158431	3300014657	Bog	RGIFYWAVVDIRTKPLESSEAGILNAVRERPVLVGAAQN*
Ga0187802_104444172	3300017822	Freshwater Sediment	QNTGIFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAARN
Ga0187821_101549992	3300017936	Freshwater Sediment	APDQNRAQFYWAIVDIRSKALESSEAGILDAVRQQAQIIGLARV
Ga0187821_105040602	3300017936	Freshwater Sediment	PDQNRAQFYWAIVDIRSKSLESSEAGILAAMRQKANVVGVAQV
Ga0187776_103890192	3300017966	Tropical Peatland	PDQNRALFYWAIIDIRTRSLESSEAGILEAVRERPALVGLTQN
Ga0187783_111516632	3300017970	Tropical Peatland	AVFYWVILDIRTRSLESSEAGILSAVRERPALVGLAQN
Ga0187781_113453051	3300017972	Tropical Peatland	NFGVFYWAIVDIRTKPLESSESGILNAVRERPVLVGAAQN
Ga0187782_115107991	3300017975	Tropical Peatland	VFYWAIVDIRTKPLESSESGILNAVRERPVLVGAAQN
Ga0187816_103194492	3300017995	Freshwater Sediment	YPEMRILALAPDQNRALFYWATLDIRSKPLESSETGILNAVRQRASLVGLAEV
Ga0187876_12500552	3300018003	Peatland	YWAIIDIRTKPLESSEAGILNAVRERPVLVGAAQN
Ga0187872_103799501	3300018017	Peatland	LALAPEQNLGIFYWAIIDIRTKPLESSEAGILNAVRERPVLLGAAQN
Ga0187855_106487052	3300018038	Peatland	YWAVVDIRSKTLESSEAGILNAVRERPVLVGAELKN
Ga0187887_102402503	3300018043	Peatland	FYWATVDVRTKPLISSEAGILSALRERPSLVGTVHT
Ga0187769_112280702	3300018086	Tropical Peatland	FYWAIVDIRTKPLESSEEGILNAVRERPALVGAAEN
Ga0187797_10275962	3300019284	Peatland	ALAPERNLGVFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAVEN
Ga0210388_107690952	3300021181	Soil	IALAPEQNRGLFYWATIDVRTKPLESSEAGILSALRDRPSLVGTVHH
Ga0210384_100308564	3300021432	Soil	QNRGLFYWAVVDIRTKALESSEAGILNAVRERPVLVGATPN
Ga0210391_104403512	3300021433	Soil	FYWAVVDVRTKALESSEAGILSALREPPSLVNTFHH
Ga0210398_102548651	3300021477	Soil	APEKNRGLLYWAVVDVRTETLESSEEGILTALREHPSVVGRLHN
Ga0242660_10004956	3300022531	Soil	KIIALAPEQNQALLYWAIIDIRSKSLESSEDGILNAMRQGPQVVGLARI
Ga0242660_11998431	3300022531	Soil	KIIALAPEQNQALLYWAIIDIRSKSLESSEDGILNAMRQGPQIVGLARI
Ga0242657_11807521	3300022722	Soil	YWASIDIRTKPVESSEAGILNAVRERPLLVGAAQN
Ga0208455_10210003	3300025453	Peatland	FYWAIIDIRTKPLESSEAGILNAVRERPVLVGAAQN
Ga0207700_118274681	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RAQFYWAFVDIRSKALESSEAGILGAMRQKSEVVGLAQV
Ga0257168_11159832	3300026514	Soil	EQNLGLFYWAIVDVRTKPLESSEAGILNALRERPSLVGTVQN
Ga0209222_10661582	3300027559	Forest Soil	ALAPEKNRGFLYWAVVDVRTEALESSEEGILSALREHPSVVGRLHN
Ga0209115_10150361	3300027567	Forest Soil	FYWAIVDIRTKPLESSEAGILNALRERPVLVAAVQN
Ga0208043_10105553	3300027570	Peatlands Soil	MKILALAPEQNRGSFYWAIVDVRTKPLGNSEARILSALRERPSLVGTVSN
Ga0208043_10879982	3300027570	Peatlands Soil	MKILAVAPEQNRGSFYWATVDVRNKPLGNSEAGILSALRKRPSLVGTASKLTD
Ga0209221_10843881	3300027609	Forest Soil	LAPEENRGVFYWAIVDIRTKPLESSEAGILSALRERPTLVGVIQN
Ga0209448_102430291	3300027783	Bog Forest Soil	IFYWAFVDIRTKPLESSEAGILNAVRERPVLVGAARN
Ga0209517_100769163	3300027854	Peatlands Soil	APEQNRGVFYWAIVDVRTKPLESSEAGILSALRDHPSLVGTVRN
Ga0209579_100839333	3300027869	Surface Soil	APDQNRAQFYWAIVDIRSKALESSEAGILDAVRQQAQIIGVARV
Ga0209067_104044392	3300027898	Watersheds	FYWAIVEIRSKTLESSEAGILKAVRQRSPLVGLVHV
Ga0209415_104842722	3300027905	Peatlands Soil	MKILALAPEQNRGSFYWATVDVRAKPLGNSEAGILSALRERPWLVGKVSN
Ga0209698_100921203	3300027911	Watersheds	ALAPEQNRALFYWAIVDVRSKPLESSEDGILNAMRQAAPVVGLARV
Ga0302232_105501061	3300028789	Palsa	EQNRALFYWAIVDIRTKPLESSEMAILNAVRERPALVGLVQN
Ga0222748_11070671	3300029701	Soil	LALAPEQNRGTYYWASIDIRTKPVESSEAGILNAVRERPLLVGAAQN
Ga0311327_101263211	3300029883	Bog	GIFYWAVVDIRTKALESSEAGILNAVRERPVLVGAAQN
Ga0311359_109833462	3300029914	Bog	ALAPEQNRGLFYWAVVDIRTKALESSEAGILNAVRERPVLVGLAPN
Ga0311328_100339874	3300029939	Bog	PEQNRGIFYWAVVDIRTKALESSEAGILNAVRERPVLVGAAQN
Ga0311328_100768873	3300029939	Bog	YPQMKILALAPEQNRGMLFWTIVNIRTNPVESSTAGILGALRDAPSIVGTVRI
Ga0311352_106689501	3300029944	Palsa	QNLGIFYWAIIDIRTKPLESSEAGILSAVRERPVLVGAAQN
Ga0311331_116406122	3300029954	Bog	RILALAPEQNRGIFYWAVVDIRTKALESSEAGILNAVRERPILVGTAQN
Ga0302281_101242791	3300030044	Fen	LAPEQNRGIFYWAVVDIRTKALESSEAGILNAVRERPVLVGAAQN
Ga0302176_100004721	3300030057	Palsa	QMRILALAPEQNRALFYWAIVDIRTKPLESSEMAILNAVRERPALVGLVQN
Ga0311372_114552512	3300030520	Palsa	RALFYWAIVDIRCKPLESSEAGILNAVRQRPAVVGLASV
Ga0311354_114633051	3300030618	Palsa	ILALAPEQNLGIFYWAIIDIRTKPLESSEAGILSAVRERPVLVGAAQN
Ga0316363_100936103	3300030659	Peatlands Soil	LAPEQNRGLFYWAVVNIRSKPVESSEAGILSAVRDAPMLVGTVRV
Ga0265769_1051012	3300030888	Soil	LAPEQNRGTYYWASIDIRTKPVESSEAGILNAVRERPLLVGAAQN
Ga0302325_108979293	3300031234	Palsa	MKILVLAPEQNRGLFYWAAVDIRTKPLESSEAGILSALRDFPSRVGTTTN
Ga0170820_103975191	3300031446	Forest Soil	GIFYWAIVDIRTKPLESSEAGILNAVRERAAMVGTTRN
Ga0302326_101051151	3300031525	Palsa	ALEPERNRGIFYWAIVDMRTKPLESSEAGILNAVRERPVLVGVTPN
Ga0302326_101272623	3300031525	Palsa	ALEPERNRGIFYWAIVDMRTKPLESSEAGILNAVRERPVLVGSYAKLIC
Ga0302326_112616691	3300031525	Palsa	ILALAPEQNRGLFYWAVVDIRTKALESSEAGILNAVRERPVLVGLAPN
Ga0310686_1073057652	3300031708	Soil	GIFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAARN
Ga0307474_100138398	3300031718	Hardwood Forest Soil	YPEMRIIALAPEQNQALLYWAIIDIRSKSLESSEDGILNAMRQGPQIVGLAGI
Ga0307478_102276093	3300031823	Hardwood Forest Soil	LALAPEQNRALFYWAIVDIRSKPLESSEEGILSAMRQRPSLVGLAQV
Ga0307478_112534651	3300031823	Hardwood Forest Soil	NRGIFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAIPN
Ga0306922_112658941	3300032001	Soil	ENRAQIYWASVDIRCKPLESSEAGILDAVRQQAIVIGLARV
Ga0311301_111103463	3300032160	Peatlands Soil	QNRALFYWAIVDIRSKPLESSEAGILNAVRQRASSVGLTPV
Ga0307471_1014939572	3300032180	Hardwood Forest Soil	PEQNRGIFYWAVVDIRTKPLESSEAGILNAVRERPVLVGTAQN
Ga0306920_1014681582	3300032261	Soil	MKILAIAPDQNRALFYWAIVDIRSKSLESSEAGILDAMRQRSQVLGLARV
Ga0335078_117371232	3300032805	Soil	LFYWAVVDIRSKALESSEAGILDAMRQRAQVVGLARI
Ga0335069_102316651	3300032893	Soil	ALAPEQNRALFYWAIVDIRSKPLESSEAGILDAMRQRAQVVGLARN
Ga0335069_102552171	3300032893	Soil	PEKNRALFYWAIVDIRSKLLESSEAGLLDAMRQRSQVVGLARI
Ga0335077_115694372	3300033158	Soil	LAPEQNRALFYWAIVDIRTRPLESSEAGILNAIRERPALVGVARN
Ga0326726_112508621	3300033433	Peat Soil	LALAPEKNRGVFFWATVDVRTKPLESSEAGILSALRERPSLAGAVHH
Ga0334817_044473_705_857	3300033820	Soil	MRILALAPEENRGTIYWAIVDVRMKPLESSESGILSALRERPSLVGTLHS
Ga0334790_181437_476_613	3300033887	Soil	LAPEQNTGVFYWAIVDIRTKPLESSEAGILNAVRERPVLVGAARN
Ga0370492_0228958_3_128	3300034282	Untreated Peat Soil	QNRGIFYWAVVDIRTKALESSEAGILNAVRERPILVGTAQN
Ga0370492_0441390_357_509	3300034282	Untreated Peat Soil	MKILALAPEQNRGMLFWTIVNIRTNPVESSTAGILGALRDAPSIVGTLRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences