Metagenome / Metatranscriptome Family F094749

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094749
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	129 residues
Representative Sequence	MRNILKSCLFTAAFVSLGALALAQYGPVGGPYQPDSVSSLIEKVHTDLNQGYDHWHLSKGDRDRLNKAEKRLRGFAVDWRHGKFDKGDLDDSISAIQHVLDNNHLAGPERDALWTDVEQLRKMREAYDRHEIGRW
Number of Associated Samples	79
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.62 %
% of genes near scaffold ends (potentially truncated)	45.71 %
% of genes from short scaffolds (< 2000 bps)	69.52 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (23.809 % of family members)
Environment Ontology (ENVO)	Unclassified (40.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (39.048 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.74% β-sheet: 0.00% Coil/Unstructured: 39.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.78
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.78
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.71
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.71
f.63.1.1: Claudin-like	d3x29a_	3x29	0.7
f.63.1.1: Claudin-like	d3x29a_	3x29	0.7
f.63.1.1: Claudin-like	d4p79a1	4p79	0.69
f.63.1.1: Claudin-like	d4p79a1	4p79	0.69
a.216.1.1: I/LWEQ domain	d1u89a1	1u89	0.68
e.18.1.1: HydB/Nqo4-like	d4u9hl_	4u9h	0.68
a.216.1.1: I/LWEQ domain	d1u89a1	1u89	0.68
e.18.1.1: HydB/Nqo4-like	d4u9hl_	4u9h	0.68

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF17137	DUF5110	2.86
PF00072	Response_reg	1.90
PF05193	Peptidase_M16_C	1.90
PF00557	Peptidase_M24	1.90
PF12779	WXXGXW	1.90
PF13517	FG-GAP_3	1.90
PF01244	Peptidase_M19	1.90
PF13535	ATP-grasp_4	0.95
PF13282	DUF4070	0.95
PF07627	PSCyt3	0.95
PF03951	Gln-synt_N	0.95
PF02310	B12-binding	0.95
PF01208	URO-D	0.95
PF13533	Biotin_lipoyl_2	0.95
PF00210	Ferritin	0.95
PF02518	HATPase_c	0.95
PF02746	MR_MLE_N	0.95
PF00487	FA_desaturase	0.95
PF07730	HisKA_3	0.95
PF04366	Ysc84	0.95
PF08447	PAS_3	0.95
PF13378	MR_MLE_C	0.95
PF02769	AIRS_C	0.95
PF05685	Uma2	0.95
PF02040	ArsB	0.95
PF13561	adh_short_C2	0.95
PF08264	Anticodon_1	0.95
PF17167	Glyco_hydro_36	0.95
PF09371	Tex_N	0.95
PF01546	Peptidase_M20	0.95
PF13602	ADH_zinc_N_2	0.95
PF03781	FGE-sulfatase	0.95
PF12055	DUF3536	0.95
PF00570	HRDC	0.95
PF13354	Beta-lactamase2	0.95
PF13620	CarboxypepD_reg	0.95
PF14870	PSII_BNR	0.95
PF05163	DinB	0.95
PF05175	MTS	0.95
PF01075	Glyco_transf_9	0.95
PF00675	Peptidase_M16	0.95
PF00430	ATP-synt_B	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	1.90
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.90
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.95
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.95
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.95
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.95
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.95
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.95
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.95
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.95
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.95
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.95
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.95
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.95
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.95
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.95
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.95
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.86 %
Unclassified	root	N/A	17.14 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.38 %
Unclassified	root	N/A	17.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.95 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	32.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.62 %
Unclassified	root	N/A	17.14 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.95 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	32.38 %
Unclassified	root	N/A	17.14 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	15.24 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.76 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	32.38 %
Unclassified	root	N/A	17.14 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	6.67 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	6.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.95 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	32.38 %
Unclassified	root	N/A	17.14 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	6.67 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	6.67 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.95 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	32.38 %
Unclassified	root	N/A	17.14 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	6.67 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	0.95 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Name	Rank	Taxonomy	Distribution
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	32.38 %
Unclassified	root	N/A	17.14 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	6.67 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.76 %
Zavarzinella formosa	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	0.95 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.95 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.95 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10161574	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300003368\|JGI26340J50214_10008080	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3386	Open in IMG/M
3300003368\|JGI26340J50214_10038685	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1373	Open in IMG/M
3300004092\|Ga0062389_100839052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1100	Open in IMG/M
3300004631\|Ga0058899_12015238	Not Available	584	Open in IMG/M
3300005338\|Ga0068868_101567865	Not Available	618	Open in IMG/M
3300005529\|Ga0070741_10029982	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7672	Open in IMG/M
3300005529\|Ga0070741_11157365	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005533\|Ga0070734_10247509	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005563\|Ga0068855_100140501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2754	Open in IMG/M
3300005614\|Ga0068856_101376209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	720	Open in IMG/M
3300006052\|Ga0075029_100538949	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	774	Open in IMG/M
3300009551\|Ga0105238_10742450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	995	Open in IMG/M
3300009553\|Ga0105249_10043352	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → Zavarzinella formosa	4092	Open in IMG/M
3300010152\|Ga0126318_10008473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	542	Open in IMG/M
3300010361\|Ga0126378_11782498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	700	Open in IMG/M
3300010375\|Ga0105239_12414580	Not Available	612	Open in IMG/M
3300010376\|Ga0126381_103371110	Not Available	629	Open in IMG/M
3300010379\|Ga0136449_100021742	All Organisms → cellular organisms → Bacteria	16278	Open in IMG/M
3300010379\|Ga0136449_100105614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5751	Open in IMG/M
3300010396\|Ga0134126_10529786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1355	Open in IMG/M
3300011120\|Ga0150983_12654128	Not Available	590	Open in IMG/M
3300012960\|Ga0164301_11632812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	536	Open in IMG/M
3300013105\|Ga0157369_12101319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	573	Open in IMG/M
3300013296\|Ga0157374_10302503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1582	Open in IMG/M
3300014167\|Ga0181528_10247048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	963	Open in IMG/M
3300014489\|Ga0182018_10452391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	683	Open in IMG/M
3300014493\|Ga0182016_10255574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1095	Open in IMG/M
3300014495\|Ga0182015_10131401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1714	Open in IMG/M
3300014501\|Ga0182024_12029697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	635	Open in IMG/M
3300016750\|Ga0181505_11190692	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2040	Open in IMG/M
3300017822\|Ga0187802_10002885	All Organisms → cellular organisms → Bacteria → Acidobacteria	4947	Open in IMG/M
3300017943\|Ga0187819_10040336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2764	Open in IMG/M
3300017970\|Ga0187783_10434927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	953	Open in IMG/M
3300017975\|Ga0187782_11673716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	503	Open in IMG/M
3300017995\|Ga0187816_10248768	Not Available	776	Open in IMG/M
3300018042\|Ga0187871_10482592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	686	Open in IMG/M
3300018062\|Ga0187784_10393597	Not Available	1121	Open in IMG/M
3300018062\|Ga0187784_10760533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	774	Open in IMG/M
3300020070\|Ga0206356_11756496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	587	Open in IMG/M
3300020075\|Ga0206349_1804417	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	916	Open in IMG/M
3300020076\|Ga0206355_1222985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	948	Open in IMG/M
3300020077\|Ga0206351_10029145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	603	Open in IMG/M
3300020610\|Ga0154015_1204141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	599	Open in IMG/M
3300021170\|Ga0210400_11639940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	507	Open in IMG/M
3300021388\|Ga0213875_10009995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4774	Open in IMG/M
3300021405\|Ga0210387_11420891	Not Available	596	Open in IMG/M
3300021476\|Ga0187846_10056745	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300021476\|Ga0187846_10473969	Not Available	512	Open in IMG/M
3300022467\|Ga0224712_10224242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	861	Open in IMG/M
3300022467\|Ga0224712_10606368	Not Available	535	Open in IMG/M
3300022708\|Ga0242670_1043213	Not Available	621	Open in IMG/M
3300022713\|Ga0242677_1041846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	648	Open in IMG/M
3300022714\|Ga0242671_1061546	Not Available	646	Open in IMG/M
3300022718\|Ga0242675_1040147	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300022718\|Ga0242675_1079928	Not Available	599	Open in IMG/M
3300025924\|Ga0207694_11470169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	575	Open in IMG/M
3300025949\|Ga0207667_10113857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2788	Open in IMG/M
3300025961\|Ga0207712_10557501	Not Available	986	Open in IMG/M
3300027812\|Ga0209656_10021401	All Organisms → cellular organisms → Bacteria → Acidobacteria	3947	Open in IMG/M
3300027854\|Ga0209517_10128038	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300027905\|Ga0209415_10819522	Not Available	645	Open in IMG/M
3300027911\|Ga0209698_10612003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	836	Open in IMG/M
3300030730\|Ga0307482_1030928	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300030730\|Ga0307482_1049364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1018	Open in IMG/M
3300030730\|Ga0307482_1061632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	942	Open in IMG/M
3300030730\|Ga0307482_1098249	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300030730\|Ga0307482_1129419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	719	Open in IMG/M
3300030730\|Ga0307482_1152938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	674	Open in IMG/M
3300030730\|Ga0307482_1263103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	545	Open in IMG/M
3300030730\|Ga0307482_1269300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	540	Open in IMG/M
3300030811\|Ga0265735_106918	Not Available	551	Open in IMG/M
3300031057\|Ga0170834_102762106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	908	Open in IMG/M
3300031058\|Ga0308189_10325293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	610	Open in IMG/M
3300031091\|Ga0308201_10212630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	646	Open in IMG/M
3300031344\|Ga0265316_10378030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1022	Open in IMG/M
3300031718\|Ga0307474_10491863	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300031938\|Ga0308175_101506943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	751	Open in IMG/M
3300031938\|Ga0308175_103210374	Not Available	507	Open in IMG/M
3300032160\|Ga0311301_10043553	All Organisms → cellular organisms → Bacteria	10668	Open in IMG/M
3300032770\|Ga0335085_10073379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4518	Open in IMG/M
3300032770\|Ga0335085_10095602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3856	Open in IMG/M
3300032770\|Ga0335085_11902367	Not Available	606	Open in IMG/M
3300032782\|Ga0335082_10095171	All Organisms → cellular organisms → Bacteria → Acidobacteria	2962	Open in IMG/M
3300032783\|Ga0335079_10005105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15056	Open in IMG/M
3300032783\|Ga0335079_10013138	All Organisms → cellular organisms → Bacteria	9448	Open in IMG/M
3300032783\|Ga0335079_10023616	All Organisms → cellular organisms → Bacteria	7045	Open in IMG/M
3300032783\|Ga0335079_10157641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	2543	Open in IMG/M
3300032805\|Ga0335078_10009902	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14114	Open in IMG/M
3300032805\|Ga0335078_10047195	All Organisms → cellular organisms → Bacteria → Acidobacteria	6383	Open in IMG/M
3300032805\|Ga0335078_12534398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	528	Open in IMG/M
3300032828\|Ga0335080_10037646	All Organisms → cellular organisms → Bacteria	5314	Open in IMG/M
3300032828\|Ga0335080_10080230	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3621	Open in IMG/M
3300032828\|Ga0335080_11071657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	817	Open in IMG/M
3300032892\|Ga0335081_10005794	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19581	Open in IMG/M
3300032892\|Ga0335081_11775176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	668	Open in IMG/M
3300032893\|Ga0335069_10177508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2615	Open in IMG/M
3300032895\|Ga0335074_10004625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18978	Open in IMG/M
3300032897\|Ga0335071_10091170	All Organisms → cellular organisms → Bacteria	2989	Open in IMG/M
3300032897\|Ga0335071_10106952	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2742	Open in IMG/M
3300032898\|Ga0335072_11115847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	710	Open in IMG/M
3300032954\|Ga0335083_10048408	All Organisms → cellular organisms → Bacteria	4526	Open in IMG/M
3300032955\|Ga0335076_10043026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4504	Open in IMG/M
3300033134\|Ga0335073_10933494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	909	Open in IMG/M
3300033158\|Ga0335077_10005151	All Organisms → cellular organisms → Bacteria	15993	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.62%
Host-Associated	Host-Associated	12.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.24%
Aquatic	Environmental → Aquatic	12.38%
Plants	Host-Associated → Plants	12.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.33%
Freshwater	Environmental → Aquatic → Freshwater	10.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.81%
Sediment	Environmental → Aquatic → Sediment	1.90%
Cave	Environmental → Terrestrial → Cave	1.90%
Roots	Host-Associated → Plants → Roots	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	31.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.67%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Loam	Environmental → Terrestrial → Soil → Loam	1.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	27.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.67%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.90%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	23.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.86%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.90%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.95%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.95%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.95%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.95%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.95%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030811	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101615742	3300000567	Peatlands Soil	GAMAQAPYGQEGGPYQPDSVSLLVDKVHSDLDQGYQHWRISGGDRERLNKAEKRLRGFANDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGPERDALGSDVEQLRQMREAYNRHEIGRW*
JGI26340J50214_100080804	3300003368	Bog Forest Soil	MQRIVLIAALAAMGTLAEAQYGPPGGPYQPESVSGLIERVHVDLNQGYKVWKMHGGDRDRLNGAEKQLREFGQQWRSGKFDKGKLDSAIAAVQHVLDNNHLAGPERDALWNDVEQLRRMREAYDRHEIGRW*
JGI26340J50214_100386852	3300003368	Bog Forest Soil	QRIVLIAALAAMGTLAEAQYGPPGGPYQPESVSGLIERVHVDLNQGYKVWKMHGGDRDRLNGAEKQLREFGQQWRSGKFDKGKLDSAIAAVQHVLDNNHLAGPERDALWNDVEQLRRMREAYDRHEIGRW*
Ga0062389_1008390521	3300004092	Bog Forest Soil	MRRFLNGVLLTAALTAFGTLAQAQYGQPGGPYQPDSVSALIDRVHADLDHGYAVWKVDGGDRGRLNGAEKELREFAEHWRKGNFDKGKLDHAISSIQHVLDNNHLKGGERDALSKDVDELRGMRAAYDRHEIGRW*
Ga0058899_120152382	3300004631	Forest Soil	LLGALAGCMRPAIAQYGPETGPYQPHSVTALVEKVHTDLTQGYDRWHLSGADRGRLNNAEKKLRGFAHDWEHAKFDKGDLDDSIAAIQHILDNNHLAGAERDALLNDTGQLRQMREAYDRHEIGRW*
Ga0068868_1015678651	3300005338	Miscanthus Rhizosphere	PYQPESVTATIDRVHADLNRGYGEWKVSKGDRERLNNAEKQLREFDRDWRKGKFNKGNLDDAISAIQHVLDDNHLTGAARDAIFGDVQELRRMREAYDRHEIGRW*
Ga0070741_100299823	3300005529	Surface Soil	MGGFKQLLHVSLITVGLALLGIPARAQYGPAGGPYQPESVTALIERVHADLNRGYDVWRLPKGDRERLDKAGKELREFASDWRHGKFDKGDLDDAISAINHVVDKNRLAGPERDALWNDVDQLRQLREAYNRHEIGRW*
Ga0070741_111573652	3300005529	Surface Soil	MRRLLLNVCLFTLAGIPALAQFGPPDSPYRPEAVTALVDRVHTDLDQGYNHWNLAKGDRDRLNNAEKQLRSFAKDWRDAKFDKGDLDDAISAIQHVLDNNHLAGAERDDLSKDVEQLRAMREAYNRHEIGRW*
Ga0070734_102475091	3300005533	Surface Soil	MSKTLRLAPIVLAAALTGFGVPAHAQYGPSGSPYQPDSVDSLVEQVHTDLNRGYDHWRLANGDKNRLNDAEKRLRNFARDWRHGKFDKGDLDDSISSVQHILDNNHLTGPERDALWNDVEQLRHMREAYDRHEIGRW*
Ga0068855_1001405011	3300005563	Corn Rhizosphere	AQYGPAGGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW*
Ga0068856_1013762091	3300005614	Corn Rhizosphere	MLRTIVFAAALIVSAGAVSAQYGPAGGPYQPDSVTSLVDRVHADLNRGYGEWKISKGDRERLNAVAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGQARDALWNDVEQLRHMREAYNRHEIGRW*
Ga0075029_1005389492	3300006052	Watersheds	MRSFVKGIFFTAIILRLATLASAQYGPAGSPYQPESVSALVDKVHVDLNHGYDQWHLSNGDRGRLNHAEKQLREFANDWRRGKFDKGNLDDSISAVQHVLDNNHLSGAARDALWSDVEQLRRMREAYDRHEIGRW*
Ga0105238_107424501	3300009551	Corn Rhizosphere	MFKTLVFAAALFMSCGVLSAQYGPANGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRERLNSAAKQLREFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDALWNDVEQLRQMREAYNRHEIGRW*
Ga0105249_100433524	3300009553	Switchgrass Rhizosphere	MLKKTALLAATFAFLSFAQYGPAGSPYQPDSVTATVDRVHDGLNRGYGEWKVSKGDRERLNNADKQLREFERDWRKGKFDMGNLDDAISAIQHVLDNNHLTGAARDAISSDVQELRRMREAYDRHEIGRW*
Ga0126318_100084731	3300010152	Soil	GPYQPDSVTALVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW*
Ga0126378_117824982	3300010361	Tropical Forest Soil	MVAFSARAQAQYGPPGSPYQPESVTTLVERVHTDLNQGYDDWHLSSGDRGRLNNAEKQLRSFARDWHHEKFDKGDLDQAIASIQHVLDNNHLSGPERDALWNDVEQLRHMREAYDRHEIGRW*
Ga0105239_124145802	3300010375	Corn Rhizosphere	MQRRPEEDGMLRTIVFAAALIVSAGAVSAQYGPAGGPYQPDSVTSLVDRVHADLNRGYGEWKISKGDRERLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGQARDALWNDVEQLRHMREAYNRHEIGRW*
Ga0126381_1033711101	3300010376	Tropical Forest Soil	MRVLCSIALSIAAAAAVGTAYAQFGGPDSRYRPEAVSNLVDKVHSDLDVGYRHWHLADSDRGRLNGAEKKLREFAKDWEKAKFDKGELDDSISSIQHVLDNNHLAGPERDALSDDVDQLRHMREAYDRHEIGRW*
Ga0136449_10002174213	3300010379	Peatlands Soil	MKIMRKILNVCLLTAGLMSFGAMAQAPYGQEGGPYQPDSVSLLVDKVHSDLDQGYQHWRISGGDRERLNKAEKRLRGFANDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGPERDALGSDVEQLRQMREAYNRHEIGRW*
Ga0136449_1001056146	3300010379	Peatlands Soil	MRQILNACLLTAALVSFGTLAQAQYGAAGGHYQPDSVNALVEKVHTDLNAGYDHWHLSNADRGRLNNAEKRLRGFARDWRNAKFDKGDLDDSIAAIQHVLDNNHLNGPERDALWGDVEQLRQMREAYDRHEIGRW*
Ga0134126_105297862	3300010396	Terrestrial Soil	MLCSIALLAGAAAATGVAYAQFGGPESKYHPEAVTSLVERVHSDLNAGYSRWHLSGGDHDRLNGAEKKLREFAKDWEKAKFDKGDLDDSIAAIQHVLDNNHLEGAERDALSDDVGQLRRMREAYDHHEIGRW*
Ga0150983_126541282	3300011120	Forest Soil	LNICLLGALAGCMRPAIAQYGPETGPYQPHSVTALVEKVHTDLTQGYDRWHLSGADRGRLNNAEKKLRGFAHDWEHAKFDKGDLDDSIAAIQHILDNNHLAGAERDALLNDTGQLRQMREAYDRHEIGRW*
Ga0164301_116328121	3300012960	Soil	MRQILHLLLAAAAIVSFGSLARAQYGAAGGPYQPDSVSALVEKVHTDLNGGYDRWHLAKDDRERLNKAEKRLRAFASDWRHGKFDKGDLDDSISAIQHVLDKNHLAGPERDALWSDAEQLRHMREAYDRHEIGSW*
Ga0157369_121013192	3300013105	Corn Rhizosphere	VSAQYGPAGGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW*
Ga0157374_103025032	3300013296	Miscanthus Rhizosphere	MAGINVLILKLGKKNMLPKKTLLAAAFFSLSLAAFAQYGPAGGPYQPDSVSATIDRVHSDLNRGYGEWKVSKGDRDRLNNAEKQLREFDRDWRHGKFDKGNLDDAISAIQHVLDNNHLTGGARDAIFSDVQELRRMREAYDRHEIGRW*
Ga0181528_102470482	3300014167	Bog	MAFLRFVTSAPAQYGAPGGPYQPNSVTALVEKVHVDLNQGYNGWHLAKGDRDRLNNAEKQLRGFSKDWEHGKFDKGDLDNSIGAIQHVLDNNHLTGAARDALWNDVEQLRHMREAYDRHEIGRW*
Ga0182018_104523911	3300014489	Palsa	VIWDLVEKVHTDLNRGYDQWHLAKGDRERLNNAEKQLREFAGDWRRGKFDKGNLDDSIAAVQHVLDNNHLSGEARDGLSHDVEELRNMREAYNRHEIGR
Ga0182016_102555741	3300014493	Bog	MRTTLKALLYLAVLLRFVTSASAQYGPAGSPYQPDTVSNLVEKVHVDLNQGYDQWHLSKGDRERLNNAEKQLREFSSDWRRGKFDKGNLDDSIAAVQHVLDNNHLSGAARDALWSDVEQLRAMREAYNRHEIGRW*
Ga0182015_101314012	3300014495	Palsa	MRLTVVLLFAGLAMAQYGPPGGPYQPDRVMALVDRVHQDLNHGYDVWHLNHGERDRLNHAEKELREFAEHWRHGRFDQGNLDHSIGAIQHVLDKNHLKGGERDALWADVEELRHMREAYDRHEIGRW*
Ga0182024_120296972	3300014501	Permafrost	GPSGGPYQLDSVNSLVEKVHTDLNRGYDQWHLSKGDRERLNNAEKQLREFAGDWRRGKFDKGNLDDSIAAVQHVLDNNHLSGEARDALWHDVEQLRNMREAYNRHEIGRW*
Ga0181505_111906923	3300016750	Peatland	MRHFVNSSLAASLSFIAFGVLAQAQFGPQGGPYQPDSVSALVDHVHEDLNHGYSVWHLSRRDRDRLNHAESQLRNFSGEWRRGKFDKGNLDDAISDTQHILDRNHLSGSERDALWSDVEQLRKMREAYDRHEIGRW
Ga0187802_100028853	3300017822	Freshwater Sediment	MKRILNVSTLAAALIGFGAMAYAQYGPPGGPYQPNSVSALVDKVQTDLNQGYDRWRLSHGDRQRLNQAEKRLRGFAGDWRNGKFDKGALDDSIHTIQHVLDNNHIAGPERDALSSDVDQLRQMREAYDRHEIGRW
Ga0187819_100403362	3300017943	Freshwater Sediment	MRKIFSICFLTAALASLTLPAFAQYGAPGGPYQPNSVTALVEKVHTDLDRGYERWHLSNGDRNRLNNAEKKLRGFARDWQHGKFDKGDLDDAIAAIQHVLDNNHLEGAERDDLSRGVDQLRQMREAYDRHEIGRW
Ga0187783_104349271	3300017970	Tropical Peatland	MMRQILHVCLLTAGMIGFGAVAHAQYGPEGGPYQPDKVSSLVDKVHTDLNDGYEHWHLSNGDRDRLNNAEKKLRSFAADWRNGKFDKGDLDDSIAAIQHVLDNNHLAGRERDNLNEDVDHLREMRQAYDRHEIGRW
Ga0187782_116737161	3300017975	Tropical Peatland	VLLRTPKYGPPGGPYQPDSVSGLVEKAHTDLNDGYSHWRLSDGDRNRLNHAEKKLRGFATDWRHGRFDKGNLDSAIAAIQHVLDNNHLAGHERDALWDDTEQLRHMREAYDRHEIGSW
Ga0187816_102487681	3300017995	Freshwater Sediment	MKRILNVSTLAAALIGFGAMAYAQYGPPGGPYQPNSVSALVDKVQTDLNQGYDRWRLSHGDRQRLNQAEKRLRGFAGDWRNGKFDKGALDDSIHTIQHVLDNNHLAGPERDALSSDVDQLRQM
Ga0187871_104825921	3300018042	Peatland	MRSILKGILFAAAFFRFVTSAPAQYGPSGGPYQPDSVNSLVEKVHTDLNRGYDQWHLSKGDRERLNKAEKQLREFAGDWRRGKFDKANLDDSIAAVQHVLDDNHLSGEARDALWHDVEELRNMREAYNRHEIGRW
Ga0187784_103935972	3300018062	Tropical Peatland	MMRQILHMCLLTAGMIGFGAVAHAQYGPEGGPYQPDKVGSLVDKVHTDLNDGYEHWHLSNGDRDRLNNAEKKLRSFAADWRNGKFDKGDLDDSIAAIQHVL
Ga0187784_107605331	3300018062	Tropical Peatland	MRQILHVFLLTAGMMGFGAVAHAQYGPEGGPYQPDKVSALVDKVHMDLNDGYEHWHLSNGDRDRLNNAEKKLRSFAADWRNAKFDKGDLDDAIAAIQHVLDNNHLAGHERDNLSDDVDHLREMRQAYDRHEIGRW
Ga0206356_117564961	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MKFALKLVMVAGMSLLPLAAQYGPAGSPYQPDSVSSLVDKVHSDLNRGYGEWKLTKGDRERLNNAEKQLREFERDWRHGKFDKGNLDDSISAVQHVLDNNHLAGGARDALWSDVEQLRQMREAYNRHEIGRW
Ga0206349_18044171	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	MLRTLVLAAALVISAGAVSAQYGPAGGPYQPDSVTALVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW
Ga0206355_12229851	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	RTLVLAAALVISAGAVSAQYGPAGGPYQPDSVTALVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW
Ga0206351_100291452	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	RTLVLAAALVISAGAVSAQYGPAGGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW
Ga0154015_12041412	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	LRTLVLAAALVISAGAVSAQYGPAGGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW
Ga0210400_116399401	3300021170	Soil	TFVTSSPAQYGPSGGPYQPDSVSSLVEKVHADLNRGYNQWHLSKGDRDRLNNAEKQLREFSSDWRRGKFDKGNLDDAIAAVQHVLDNNHLSGEARDALGQDVEQLRSMREAYNRHEIGRW
Ga0213875_100099952	3300021388	Plant Roots	MKLFRGMILGATLLTFAAVAPAQFGPANGRYQPSAVSALVDRVHEDLNHGYSAWNLSHGDRDRLTHAEHQLREFAKQWRRAKFDKGDLDDSIAAVQHVLDNNHLHGAERDALSADVQELRDMREAYDRHEIGYR
Ga0210387_114208911	3300021405	Soil	LVAVGTFAARPVDQTGRSGRSLAFPPGKEAGMQRLLHVWVLGGALIGLGVPAMAQFGSAGSPYQPDAVSGLVDRVHADLNQGYNNWRVSGGDHDRLNKAEKRLRAFAADWRHEKFDKGDLDDSISTIQHVLDNNHLAGAERDALSKDVDQLRQMREAYDRHEIGRW
Ga0187846_100567452	3300021476	Biofilm	MKMSLNVLLVTAALVGFGSLAQAQYGSPGGPYQPNSVSSLVDQVHTDLNHGYDHWRLSNADRDRLNNAEKQLRAFERDWRNAKFDKGNLDDSIGAIQHVLDNNHLRGPERDALSKDVDQLREMREAYDRHEIGRW
Ga0187846_104739691	3300021476	Biofilm	QPESVNALVDQVHADLNHGYEHWRLSNADRDRLNNAEKQLRAFAREWTRAKFDKGELDNSIAAIQHVLDTNDLRGPERDALSDDVGRLRELREAYDRHEIGRW
Ga0224712_102242422	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LPKKTLLAAAFFSLSLAAFAQYGPAGGPYQPDSVSATIDRVHSDLNRGYGEWKVSKGDRDRLNNAEKQLREFDRDWRHGKFDKGNLDDAISAIQHVLDNNHLTGGARDAIFSDVQELRRMREAYDRHEIGRW
Ga0224712_106063682	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	AQYGPAGGPYQPDSVTSLVDRVHADLNRGYGEWKISKGDRERLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGQARDALWNDVEQLRHMREAYNRHEIGRW
Ga0242670_10432132	3300022708	Soil	LHVFILTAGMVTFGALAQAQYGPEGGPYQPDSVSGLIDKVHTDLNDGYSHWQLAKGDRDRLNNAEKKLRGFASDWRNGKFDKGDLDDSIAAIQHVLDNNHLAGAERDALWNDTESLRKMREAYDRHEIGRW
Ga0242677_10418462	3300022713	Soil	GGPYQPDSVSGLVDRVHTDLNHGYDQWHLSKGDRDRLNNAEKQLREFVRQWREGKFDKGDLDSSISAVQHVLDNNHLSGEARDAIWNDCEQLRHMREAYDRHEIGRW
Ga0242671_10615461	3300022714	Soil	ILHVFILTAGMVTFGALAQAQYGPEGGPYQPDSVSGLIDKVHTDLNDGYSHWQLAKGDRDRLNNAEKKLRGFASDWRNGKFDKGDLDDSIAAIQHVLDNNHLAGAERDALWNDTESLRKMREAYDRHEIGRW
Ga0242675_10401472	3300022718	Soil	MQRLSNVLMIAGALVGMGIPAMAQYGPAGGPYQPDSVSALVDKVHTDLNQGYDHWKLAGGDRQRLDKAEKRLRSFATDWRHGKFDKGDLDDSISTVQHVLDNNHLQGAERDALSSDVDQLRQLREAYDRHEIGRW
Ga0242675_10799281	3300022718	Soil	GALIGLGLPAMAQFGPSGGPYQPDSVSALVDRVHTDLNQGYNNWRLSGGDHDRLNKAEKRLRAFVADWRHEKFDKGELDDSISTIQHVLDNNHLAGAERDALSRDVDQLRQMREAYDRHEIGRW
Ga0207694_114701691	3300025924	Corn Rhizosphere	MFKTLVFAAALFMSCGVLSAQYGPANGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRERLNSAAKQLREFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDALWNDVEQLRQMREAYNRHEIGRW
Ga0207667_101138572	3300025949	Corn Rhizosphere	MLRTLVLAAALVISAGAVSAQYGPAGGPYQPDSVTSLVNRVHEDLNRGYGEWKISKGDRDRLNAAAKQLRDFERDWRHGKFDKGDLDDAISAVQHVLDNNHLTGAARDAIWNDVGELRHMREAYDRHEIGRW
Ga0207712_105575011	3300025961	Switchgrass Rhizosphere	MLKKTALLAATFAFLSFAQYGPAGSPYQPDSVTATVDRVHDGLNRGYGEWKVSKGDRERLNNADKQLREFERDWRKGKFDMGNLDDAISAIQHVLDNNHLTGAARDAISSDVQELRRMREAYDRHEIGRW
Ga0209656_100214012	3300027812	Bog Forest Soil	MQRIVLIAALAAMGTLAEAQYGPPGGPYQPESVSGLIERVHVDLNQGYKVWKMHGGDRDRLNGAEKQLREFGQQWRSGKFDKGKLDSAIAAVQHVLDNNHLAGPERDALWNDVEQLRRMREAYDRHEIGRW
Ga0209517_101280382	3300027854	Peatlands Soil	LTAGLMSFGAMAQAPYGQEGGPYQPDSVSLLVDKVHSDLDQGYQHWRISGGDRERLNKAEKRLRGFANDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGPERDALGSDVEQLRQMREAYNRHEIGRW
Ga0209415_108195221	3300027905	Peatlands Soil	GPLALTFGGMKIMRKILNVCLLTAGLMSFGAMAQAPYGQEGGPYQPDSVSLLVDKVHSDLDQGYQHWRISGGDRERLNKAEKRLRGFANDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGPERDALGSDVEQLRQMREAYNRHEIGRW
Ga0209698_106120031	3300027911	Watersheds	MRSFVKGIFFTAIILRLATLASAQYGPAGSPYQPESVSALVDKVHVDLNHGYDQWHLSNGDRGRLNHAEKQLREFANDWRRGKFDKGNLDDSISAVQHVLDNNHLSGAARDALWSDVEQLRRMREAYDRHEIGRW
Ga0307482_10309281	3300030730	Hardwood Forest Soil	FMRSILKITLIAACLLRFAALAPAQYAPDDVSALVDRVHADLNRGYEQWHLSKGDRDRLNNAEKQLREFAREWRERKFDKGDLDSAIAAVQHVLDNNHLSGEARDAIWNDVEQLRRMREAYDRHELGPR
Ga0307482_10493642	3300030730	Hardwood Forest Soil	MRHILSVMFLTAVLTGFSANVQAQFGPESGPYQPDSISNLVEKIHGDLNNGYDHWHLSNADRSRLNNAEKRLRGFSRDWRNAKFDKGALDESIASVQHVLDNNHLSGPERDALWTDVEQLRHMREAYDRHEIGRW
Ga0307482_10616321	3300030730	Hardwood Forest Soil	QTLMICLLSVLAWTVQPARAQYGPAGGPYQPDSVNSLIDRVHTDLDRGYDHWQLSHADRDRLNGAEKKLRGFARDWQHGKFDKGDLDESISSIQHVLDNNHLAGAERDDLWSDVSSLRQMREAYDRHEIGRW
Ga0307482_10982491	3300030730	Hardwood Forest Soil	LHVFILTAGMVTFGALAQAQYGPEGGPYQPDSVSALVDKVHTDLNDGYSHWQLSNGDRDRLNNAEKKLRSFASDWRKGRFDKGDLDESIAAIQHVLDNNHLAGHERDALWTDTESLRHMREAYDRHEIGRW
Ga0307482_11294191	3300030730	Hardwood Forest Soil	RASYICILAAGLVSFGTLARAQYGEPNGPYQPDSVSALVDRVHTDLNQGYDHWQLAKGDRERLTGAEKKLRGFATDWRRGTFDKGDLDESIASVQHVLDNNHLTGPERDALWADVEQLRHMREAYDRHEIGRW
Ga0307482_11529381	3300030730	Hardwood Forest Soil	TFAALAPAQYGPEGGPYQPDAVSGLVDRVHTDLNHGYEQWHLSKGDRDRLNNAEKQLREFVRQWREGKFDKGDLDSSISAVQHVLDNNHLSGEARDAIWNDVEQLRHMREAYDRHEIGRW
Ga0307482_12631032	3300030730	Hardwood Forest Soil	LAFVLPANAQYGPESGPYQPSSVNALVDKVHSDLSQGYEHWRLASADRNRLNNAEKKLRSFARDWEHAKFDKGELDEFIAAVQHVLDNNHLAGVERDTLWNDVESLRHMREAYDRHEIGR
Ga0307482_12693001	3300030730	Hardwood Forest Soil	RMRRTLNVLFITAALATFGALAQEVQYGPPGGPYQPDSVSSLVDRVHSDLDQGYNHWKLAGGDRDRLNKAEKKLRGFASDWRHGKFDKGDLDESIASIQHVLDNNKMPADARDSISKDLDQLRSMREAYDRHEIGGAN
Ga0265735_1069182	3300030811	Soil	HVWMLAGVLAGLAAPAFAQYGPAGGPYQPDSVSALVDKVHTDLNQGYDHWKLAGGDRQRLDKAEKRLRSFATDWRHGKFDKGDLDDSISTVQHVLDNNHLAGAERDALSADVDQLRKLREAYDRHEIGSW
Ga0170834_1027621061	3300031057	Forest Soil	MQRLSNVLMIAGALIGLSIPAMAQYGPANGPYQPDSVSALVDKVHTDLNQGYDHWKLAGGDRQRLDKAEKRLRSFATDWRHGKFDKGDLDDSISTVQHVLDNNHLQGAERDALSSDVDQLRQLREAYDRHEIGRW
Ga0308189_103252931	3300031058	Soil	MRNILKSCLFTAAFVSLGALALAQYGPVGGPYQPDSVSSLIEKVHTDLNQGYDHWHLSKGDRDRLNKAEKRLRGFAVDWRHGKFDKGDLDDSISAIQHVLDNNHLAGPERDALWTDVEQLRKMREAYDRHEIGRW
Ga0308201_102126301	3300031091	Soil	RKALHLLLATAAIVTFGSLARAQYGAAGGPYQPDSVTALVEKVHADLNGGYNRWHLKGDDRDRLNKAEKRLRAFASDWRHGKFDKGDLDDSISAIQHVLDKNHLAGPERDALWSDVEQLRHMREAYDRHEIGRW
Ga0265316_103780301	3300031344	Rhizosphere	PENGPYRPDAVTSLVDKVHTDLNSGYDHWHLSSGDHDRLNKAEKRLRAFASDWRNAKFDKGDLDDSIASIQHVLDNNKLSGPERDAISADVDQLRKMREAYDHHEIGRW
Ga0307474_104918632	3300031718	Hardwood Forest Soil	MRQFLHLCLLGAALVSLGTLAEAQYGPPGGPYQPDSVSHLVDKVHTDLDQGYDHWHLSGGDKGRLNKAEKQLRNFAADWRHGKFDKGDLDDSISSIQHVLDNNHLTGPERDALSSDVDQCRQLREAYNRHEIGSW
Ga0308175_1015069432	3300031938	Soil	PDSVSSLVEKVHSDLNRGYGEWKLTKGDRERLNNAEKQLREFERDWRHGKFDKGNLDDSISAVQHVLDNNHLTGGARDALWSDVEQLRQMREAYNRHEIGRW
Ga0308175_1032103742	3300031938	Soil	AAFLACSTLAIAQYGPAGGPYQPDSVTATVDRVHADLNRGYGEWKIKKDDRERLNKAAKQLREFEHDWRKGKFNKDELDESIRAIQHVLDENHLRGEARDAVFSAVQELRRMREAYDRHEIGRW
Ga0311301_100435535	3300032160	Peatlands Soil	MRKILNVCLLTAGLMSFGAMAQAPYGQEGGPYQPDSVSLLVDKVHSDLDQGYQHWRISGGDRERLNKAEKRLRGFANDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGPERDALGSDVEQLRQMREAYNRHEIGRW
Ga0335085_100733794	3300032770	Soil	VRQILHVLLLTAGMVGFGALAQAQYGPPGGPYQPDSVSNLVEKVHTDLNAGYSHWHLSDGDRDRLNNAEKKLRAFAGDWRHGKFDKGDLDDSIAAIQHVLDNNHLSGPERDALWNDTEQLRGMREAYDRHEIGRW
Ga0335085_100956024	3300032770	Soil	MRRAMQICVLAAGLVSFGTFAYAQYGPPNGPYQPNSVNSMVERVHTDLNQGYAHWHLAKGDRDRLNNAEKKLRGFANDWQHGKFDKGDLDESIASIQHVLDNNHLEGPERDALGSDVEQLRQMRQAYDRHEIGRW
Ga0335085_119023671	3300032770	Soil	MRRMLNLFLPAAALVILSTSAQAQFGPAGGPYQPDSVTALVEKVHTDLNQGYDRWHLSNGDRDRLNDAEKKLRSFARDWRHAKFDKGDLDSAIAAIQHVFDNNHLNGPERDALGSDVDNLRRMREAYDRHEIGRW
Ga0335082_100951711	3300032782	Soil	MRQLLSFCSLVALTGALTLANAQYGPQNGPYQPGSVNALVERVHTDLNQGYEHWHLASGDRDRLNNAEKKLRGFAKDWEHAKFDKGELDDSISAIQHVLDNNHLAGAERDALWNDVESLRKMREAYDRHEIGRW
Ga0335079_1000510511	3300032783	Soil	MRRMLNLLVPVAAFVALSTSAQAQFGPAGGPYQPDSVTALVEKVHTDLNQGYDRWHLSNGDRDRLNDAEKKLRSFARDWRHAKFDKGDLDSSIAAIQHVFDNNHLSGPERDALGSDVENLRRMREAYDRHEIGRW
Ga0335079_1001313810	3300032783	Soil	MSNSFGLRGLVVLFVLAGFQIVGHAQYGPAGGPYQPDSVDSLVDRVHADLNRGYDQWHLSNGDRSRLNNAEKRLRSFARDWRHERFDKGDLDDSIAAIQHVLDNNHLAGRERDDLWNDVEQLRRMRQAYDRHEIGRS
Ga0335079_100236164	3300032783	Soil	MKRILNISALAAALIGFGALAYAQYGAPGGPYQPDSVNALADKVQTDLNQGYERWHRSHGDRQRLNQAEKRLRGFAGDWRNGKFDKGALDESIHTFQHVLDNNHLAGPERDALSSDVDQLRQMREAYDRHEIGRW
Ga0335079_101576412	3300032783	Soil	MRQIVNYCLFAAALVCFGTRAQAQYGPQGSPYQPDSVTTLVERVHTDLNHGYERWHLSNGDRDRLNHAEKQLRSFAHDWRNAKFDKGDLDNSIAAIQHVLDNNHLQGPERDALWNDVEQLRHMREAYDRHEIGRW
Ga0335078_100099025	3300032805	Soil	MRKILHVFLLTAGMAVFSGLALAQYGPPGGPYQPDSVSSLVDKVHVDLNNGYTHWHLSNGDRDRLNNAERKLRGFASDWRHGKFDKGDLDDSIAAIQHVLDNNHLAGHERDALWNDTEQLRRMREAYDRHEIGRW
Ga0335078_100471953	3300032805	Soil	MRQVIYVLFCSAVLVGFSTVASAQFGPPNGPYQPQAVNNLVERVQADLNRGYDHWHLGNGERERLNNAEKQLRAFAHDWEHARFDKDALDHSIGAVQKVLNDNHLSGPERDALWNDVEQLRHMREAYDRHEIGRW
Ga0335078_125343981	3300032805	Soil	PLVCTTSYCEERNMRRALQICMLAGALASFGTLAYAQYGAPNGPYQPDSVSSMVDRVHTDLNQGYEHWHLAKGDRDRLNNAEKKLRGFADDWRRGKFDKGDLDESIASIQHVLDNNHLQGPERDALGSDVEQLRQMRVAYDRHEIGRW
Ga0335080_100376463	3300032828	Soil	MLNLLVPVAAFVALSTSAQAQFGPAGGPYQPDSVTALVEKVHTDLNQGYDRWHLSNGDRDRLNDAEKKLRSFARDWRHAKFDKGDLDSSIAAIQHVFDNNHLSGPERDALGSDVENLRRMREAYDRHEIGRW
Ga0335080_100802304	3300032828	Soil	MSKLFLFFSVIALMGALTFANAQYGPDNGPYQPSSVNALVERVHTDLNQGYERWHLSGGDRDRLNNAEKKLRAFAKDWEHAKFDKGELDDAISSIQHVLDNNHLSGPERDALFTDVESLRKMREAYDRHEIGRW
Ga0335080_110716572	3300032828	Soil	ALTLASAQYGPDNGPYQPSSVNALVDRVHSDLNAGYEHWHLSGGDRDRLNAAEKKLRGFAKDWEHAKFDKSELDDAISSIQHVLDNNHLTGAERDALFNDVESLRKMREAYDRHEIGRW
Ga0335081_1000579411	3300032892	Soil	MKRILNISALAAALIGFGALAYAQYGAPGGPYQPDSVNALADKVQTDLNQGYERWHRSHGDRQRLNQAEKRLRGFAGDWRNGKFDKGALDESIHTFQHVLDNNHLAGPERDALSSDVEQLRQMREAYDRHEIGRW
Ga0335081_117751762	3300032892	Soil	GAAGGPYQPDSVTALVEKVHTDLNAGYDHWHLSNADRGRLNNAEKRLRGFAHDWRDGKFDKGDLDDSIAAIQHVLDNNHLHGPERDALWSDVEQLRQMREAYDRHEIGRW
Ga0335069_101775083	3300032893	Soil	GPYQPDSVNALVERVHADLNRGYGEWRISHGDRDRLNDAEKQLRSFARDWRRGRFDKDDLDHSIAAIQHVLDNNHLAGPARDALWSDVENLRHMREAYDRHEIGRW
Ga0335074_1000462510	3300032895	Soil	MRQILHVFLLTAGMMACGALAQAQYGPPGGPYQPDSVSNLVEKVHVDLNAGYAHWRLSNGDRDRLNKAEKQLRGFAADWRHAKFDKGDLDDSIAAIQHVLDNNHLTGSERDALWNDTEQLRQMREAYDRHEIGRW
Ga0335071_100911702	3300032897	Soil	MARWGHGLALARDLHSNRPEKRDMRRLLNVLLYTASFAGLAGTGHAQYGRPGGPYQPDSVNALVERVHADLNRGYGEWRISHGDRDRLNDAEKQLRSFARDWRRGRFDKDDLDHSIAAIQHVLDNNHLAGPARDALWSDVENLRHMREAYDRHEIGRW
Ga0335071_101069522	3300032897	Soil	MRPLILTFAFVAIGTLARAQYGPPGGPYQPNSVNALVDRVHADLNRGYGEWRISHNDRNRLNDAEKRLRSFAHDWQHGRFDKDDLDDSISAVQHVLDNNHLSGAARDALWDDVQSLRRMREAYDRHEIGRW
Ga0335072_111158472	3300032898	Soil	MRQILHVFLLTAGMVAFGTLARAQYGPAGGPYQPDSVSSLVDKVHVDLNSGYGHWHLSGGDRDRLNHAEKRLRSFAADWRHGKFDKGDLDDSIAAIQHVLDNNHLSGPERDNLWNDTESLRRMREAYDRHEIGRW
Ga0335083_100484084	3300032954	Soil	MLNLFLPAAALVILSTSAQAQFGPAGGPYQPDSVTALVEKVHTDLNQGYDRWHLSNGDRDRLNDAEKKLRSFARDWRHAKFDKGDLDSAIAAIQHVFDNNHLNGAERDALGSDVDNLRRMREAYDRHEIGRW
Ga0335076_100430261	3300032955	Soil	MLNSFGLRGLVVLFVLAGFQIVGHAQYGPAGGPYQPDSVDSLVDRVHADLNRGYDQWHLSNGDRSRLNNAEKRLRSFARDWRHERFDKGDLDDSIAAIQHVLDNNHLAGRERDDLWNDVEQLRRMRQAYDRHEIGRS
Ga0335073_109334942	3300033134	Soil	MRQILHVFLLTAGMVAFGTLARAQYGPAGGPYQPDSVSSLVDKVHVDLNSGYGHWHLSGGDRDRLNHAEKRLRSFAADWRHGKFDKGDLDDSIAAIQHVLDNNHLSGPERDNLWNDTESLRRMREAY
Ga0335077_100051519	3300033158	Soil	MSNSFGLRGLVVLFVLAGFQIVGHAQYGPAGGPYQPDSVDSLVDRVHADLNRGYDQWHLSNGDRSRLNNAEKRLRSFARDWRHERFDKGDLDDSIAAIQHVLDNNHLAGRERDDLWDDVEQLRRMRQAYDRHEIGRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094749

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences