Metagenome / Metatranscriptome Family F094742

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094742
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	98 residues
Representative Sequence	MLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.52 %
% of genes near scaffold ends (potentially truncated)	29.52 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.905 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil (83.809 % of family members)
Environment Ontology (ENVO)	Unclassified (93.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (97.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 82.42% β-sheet: 0.00% Coil/Unstructured: 17.58%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF03401	TctC	20.95
PF00563	EAL	10.48
PF00990	GGDEF	3.81
PF05227	CHASE3	2.86
PF02771	Acyl-CoA_dh_N	0.95
PF13531	SBP_bac_11	0.95
PF11381	DUF3185	0.95
PF03992	ABM	0.95
PF01209	Ubie_methyltran	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	20.95
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	10.48
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	10.48
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	10.48
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	10.48
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.95
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.95
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
All Organisms	root	All Organisms	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
cellular organisms	root	All Organisms → cellular organisms	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	22.86 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.81 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.81 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.90 %
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.81 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.90 %
Desulfonauticaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonauticaceae	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.81 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.90 %
Desulfovulcanus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonauticaceae → Desulfovulcanus	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.81 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1.90 %
Desulfovulcanus ferrireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonauticaceae → Desulfovulcanus → Desulfovulcanus ferrireducens	0.95 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009597\|Ga0105259_1000187	All Organisms → cellular organisms → Bacteria → Proteobacteria	9510	Open in IMG/M
3300009597\|Ga0105259_1018717	Not Available	1429	Open in IMG/M
3300009597\|Ga0105259_1062141	Not Available	846	Open in IMG/M
3300009609\|Ga0105347_1003497	All Organisms → cellular organisms → Bacteria → Proteobacteria	5920	Open in IMG/M
3300009609\|Ga0105347_1281622	Not Available	692	Open in IMG/M
3300009610\|Ga0105340_1116462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1083	Open in IMG/M
3300009678\|Ga0105252_10138427	Not Available	1006	Open in IMG/M
3300011397\|Ga0137444_1000331	All Organisms → cellular organisms → Bacteria → Proteobacteria	4826	Open in IMG/M
3300011397\|Ga0137444_1024966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	858	Open in IMG/M
3300011397\|Ga0137444_1032216	Not Available	774	Open in IMG/M
3300011397\|Ga0137444_1066431	Not Available	565	Open in IMG/M
3300011399\|Ga0137466_1001241	Not Available	2284	Open in IMG/M
3300011403\|Ga0137313_1000613	All Organisms → cellular organisms → Bacteria → Proteobacteria	10898	Open in IMG/M
3300011405\|Ga0137340_1104261	Not Available	546	Open in IMG/M
3300011406\|Ga0137454_1044050	Not Available	694	Open in IMG/M
3300011407\|Ga0137450_1005786	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300011413\|Ga0137333_1010163	Not Available	2043	Open in IMG/M
3300011413\|Ga0137333_1018552	Not Available	1531	Open in IMG/M
3300011413\|Ga0137333_1032828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1163	Open in IMG/M
3300011419\|Ga0137446_1001603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3337	Open in IMG/M
3300011423\|Ga0137436_1015605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1868	Open in IMG/M
3300011424\|Ga0137439_1003833	Not Available	1954	Open in IMG/M
3300011425\|Ga0137441_1011883	Not Available	1709	Open in IMG/M
3300011427\|Ga0137448_1210221	Not Available	539	Open in IMG/M
3300011428\|Ga0137456_1010751	Not Available	1777	Open in IMG/M
3300011429\|Ga0137455_1007163	All Organisms → cellular organisms → Bacteria → Proteobacteria	3003	Open in IMG/M
3300011429\|Ga0137455_1198176	Not Available	598	Open in IMG/M
3300011430\|Ga0137423_1033210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1570	Open in IMG/M
3300011434\|Ga0137464_1090745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	893	Open in IMG/M
3300011436\|Ga0137458_1015526	Not Available	1810	Open in IMG/M
3300011437\|Ga0137429_1008272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2995	Open in IMG/M
3300011438\|Ga0137451_1006318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3479	Open in IMG/M
3300011441\|Ga0137452_1016182	All Organisms → cellular organisms → Bacteria → Proteobacteria	2283	Open in IMG/M
3300011442\|Ga0137437_1111094	Not Available	941	Open in IMG/M
3300011443\|Ga0137457_1003618	All Organisms → cellular organisms → Bacteria → Proteobacteria	3534	Open in IMG/M
3300011444\|Ga0137463_1224983	Not Available	701	Open in IMG/M
3300011445\|Ga0137427_10106368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfonauticaceae → Desulfovulcanus → Desulfovulcanus ferrireducens	1135	Open in IMG/M
3300012034\|Ga0137453_1004630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1765	Open in IMG/M
3300012034\|Ga0137453_1086265	Not Available	611	Open in IMG/M
3300012039\|Ga0137421_1122882	Not Available	757	Open in IMG/M
3300012040\|Ga0137461_1005521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2788	Open in IMG/M
3300012040\|Ga0137461_1013803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1944	Open in IMG/M
3300012113\|Ga0137328_1000884	Not Available	1686	Open in IMG/M
3300012129\|Ga0137345_1016533	Not Available	852	Open in IMG/M
3300012140\|Ga0137351_1048682	Not Available	600	Open in IMG/M
3300012142\|Ga0137343_1001176	Not Available	2904	Open in IMG/M
3300012143\|Ga0137354_1008213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1517	Open in IMG/M
3300012143\|Ga0137354_1071159	Not Available	553	Open in IMG/M
3300012146\|Ga0137322_1036426	Not Available	720	Open in IMG/M
3300012159\|Ga0137344_1000676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4174	Open in IMG/M
3300012160\|Ga0137349_1078142	Not Available	607	Open in IMG/M
3300012161\|Ga0137336_1004061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2480	Open in IMG/M
3300012161\|Ga0137336_1021464	Not Available	1143	Open in IMG/M
3300012161\|Ga0137336_1025526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1054	Open in IMG/M
3300012163\|Ga0137355_1024239	Not Available	1101	Open in IMG/M
3300012171\|Ga0137342_1034958	Not Available	973	Open in IMG/M
3300012173\|Ga0137327_1048283	Not Available	930	Open in IMG/M
3300012175\|Ga0137321_1118168	Not Available	596	Open in IMG/M
3300012179\|Ga0137334_1002070	All Organisms → cellular organisms → Bacteria → Proteobacteria	3571	Open in IMG/M
3300012227\|Ga0137449_1016698	Not Available	1379	Open in IMG/M
3300012228\|Ga0137459_1120138	Not Available	767	Open in IMG/M
3300012228\|Ga0137459_1253224	Not Available	509	Open in IMG/M
3300012231\|Ga0137465_1039313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1398	Open in IMG/M
3300012231\|Ga0137465_1143743	Not Available	720	Open in IMG/M
3300012232\|Ga0137435_1002406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5591	Open in IMG/M
3300012232\|Ga0137435_1046617	Not Available	1271	Open in IMG/M
3300012232\|Ga0137435_1125437	Not Available	779	Open in IMG/M
3300012671\|Ga0137318_1001063	Not Available	1745	Open in IMG/M
3300012676\|Ga0137341_1001909	Not Available	2831	Open in IMG/M
3300014861\|Ga0180061_1023126	Not Available	932	Open in IMG/M
3300014861\|Ga0180061_1087568	Not Available	525	Open in IMG/M
3300014865\|Ga0180078_1015224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1112	Open in IMG/M
3300014871\|Ga0180095_1037308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	831	Open in IMG/M
3300014872\|Ga0180087_1001172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3932	Open in IMG/M
3300014874\|Ga0180084_1058300	Not Available	775	Open in IMG/M
3300014875\|Ga0180083_1100306	Not Available	634	Open in IMG/M
3300014876\|Ga0180064_1067612	Not Available	732	Open in IMG/M
3300014878\|Ga0180065_1022711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1279	Open in IMG/M
3300014878\|Ga0180065_1050231	Not Available	896	Open in IMG/M
3300014880\|Ga0180082_1148761	Not Available	542	Open in IMG/M
3300015248\|Ga0180079_1048938	Not Available	619	Open in IMG/M
3300015250\|Ga0180072_1060479	Not Available	650	Open in IMG/M
3300015252\|Ga0180075_1057559	Not Available	656	Open in IMG/M
3300015257\|Ga0180067_1021015	Not Available	1251	Open in IMG/M
3300015257\|Ga0180067_1047146	Not Available	903	Open in IMG/M
3300018083\|Ga0184628_10012141	All Organisms → cellular organisms → Bacteria → Proteobacteria	4171	Open in IMG/M
3300018084\|Ga0184629_10249768	Not Available	927	Open in IMG/M
3300019208\|Ga0180110_1038315	Not Available	967	Open in IMG/M
3300019229\|Ga0180116_1231451	Not Available	608	Open in IMG/M
3300019238\|Ga0180112_1019048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	749	Open in IMG/M
3300019238\|Ga0180112_1302752	Not Available	745	Open in IMG/M
3300019248\|Ga0180117_1086422	Not Available	608	Open in IMG/M
3300019249\|Ga0184648_1123293	All Organisms → cellular organisms → Bacteria → Proteobacteria	951	Open in IMG/M
3300019257\|Ga0180115_1228700	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300019257\|Ga0180115_1294450	Not Available	590	Open in IMG/M
3300019257\|Ga0180115_1464469	Not Available	624	Open in IMG/M
3300020064\|Ga0180107_1289023	Not Available	523	Open in IMG/M
3300020065\|Ga0180113_1211253	Not Available	574	Open in IMG/M
3300021081\|Ga0210379_10365384	Not Available	635	Open in IMG/M
3300027362\|Ga0208320_1000134	All Organisms → cellular organisms → Bacteria → Proteobacteria	10231	Open in IMG/M
3300027362\|Ga0208320_1018669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	797	Open in IMG/M
3300027362\|Ga0208320_1043131	Not Available	518	Open in IMG/M
3300028803\|Ga0307281_10024319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26	1777	Open in IMG/M
3300034149\|Ga0364929_0010979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2499	Open in IMG/M
3300034149\|Ga0364929_0110858	Not Available	870	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.14%
Terrestrial	Environmental → Terrestrial	2.86%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	85.71%
Freshwater	Environmental → Aquatic → Freshwater	11.43%
Floodplain	Environmental → Terrestrial → Floodplain	1.90%
Soil	Environmental → Terrestrial → Soil	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	85.71%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.43%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	85.71%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.43%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	83.81%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	11.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009597	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299	Environmental	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011403	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT166_2	Environmental	Open in IMG/M
3300011405	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011407	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011419	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT357_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011424	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012113	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT100_2	Environmental	Open in IMG/M
3300012129	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT530_2	Environmental	Open in IMG/M
3300012140	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2	Environmental	Open in IMG/M
3300012142	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT499_2	Environmental	Open in IMG/M
3300012143	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT790_2	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012161	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT300_2	Environmental	Open in IMG/M
3300012163	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT800_2	Environmental	Open in IMG/M
3300012171	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT466_2	Environmental	Open in IMG/M
3300012173	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012671	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT300_2	Environmental	Open in IMG/M
3300012676	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT433_2	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300014865	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10D	Environmental	Open in IMG/M
3300014871	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_1Da	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300014875	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10D	Environmental	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014878	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015250	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293B_16_10D	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300027362	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105259_10001874	3300009597	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0105259_10187172	3300009597	Soil	MLKRMRFLKHLSGLVRRQRSPATAMEVHWCGLAEWVDGHSRTGRTAQTLALSTAAGKSSWDEIARAAIDYGDEQFAGEVVGFVEQQLRQMS*
Ga0105259_10621411	3300009597	Soil	MLNSMKFLNQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARLAIEYGDESFAGEVVGYVEQRLRQMS*
Ga0105347_10034974	3300009609	Soil	VQRHQSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0105347_12816221	3300009609	Soil	MTRLGRGTMLDTVRFLNHIAKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIACGDENFAGEVVGYVEQRLRQMS*
Ga0105340_11164622	3300009610	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0105252_101384272	3300009678	Soil	MTRLGRRTMLNTVRFLNHISRLVQRRRSQASAMESKWCGLAELLEVRSRTSKAAQILASPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137444_10003313	3300011397	Soil	MTRLGRGTMLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137444_10249661	3300011397	Soil	GTMLDTVKFLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDETFAGEVVGYVEQKLRQMS*
Ga0137444_10322161	3300011397	Soil	MLKSMRFLRRISRLVQRQPSHVSAMQPEWCGLAELVAGRSRTSKAAQTLALSTAAGVSSWDEIARAAIEHGDEHFAGEVVGFVEQQLRQMS*
Ga0137444_10664311	3300011397	Soil	RGTMLNTVRFLNHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137466_10012412	3300011399	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQAPAMESRWCGLAELGEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQRLRQMS*
Ga0137313_100061314	3300011403	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137340_11042611	3300011405	Soil	LPNTAHAHSRREKSPIQNVWIDSLTSLRHGSMLNSMKFLNQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARAAIEYGDESFAGEVVGYVEQRLRQMS*
Ga0137454_10440501	3300011406	Soil	MLKSMRFLRHISRLVQRQPSHVSAMQSEWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIEYGDENFAGEVVGFVEQQLRQMS*
Ga0137450_10057861	3300011407	Soil	MTRLGRGTMLDTVRFLNHISRLVQRHRSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDETFAGEVVGYVEQKLRQMS*
Ga0137333_10101632	3300011413	Soil	MLNSMKLLDQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARVAFDYGDESFAGEVVGYVEQRLRQMS*
Ga0137333_10185523	3300011413	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLDSVRFLNHLSRLVQRRRSHASAMESKWCVLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137333_10328282	3300011413	Soil	MTRLGRGTMLDTVKLLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0137446_10016034	3300011419	Soil	MLKRMRFLKHLSGLVRRQRSQASAIESKWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIDSGDENFAGEVVGFVEQQLRRLS*
Ga0137436_10156054	3300011423	Soil	MTGLRRKSMLKRMRFLKHISWLVRRQPSHASAMQPEWCGLAELVEGRSRTSKAAQSLALSTAIGTSSWDEIARAAIERGDEKFAGEVVGYVERQLRQMS*
Ga0137439_10038333	3300011424	Soil	MTRLGRGTMLDTVRFLNYISKLVQRHQSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0137441_10118832	3300011425	Soil	MTRLGRGTMLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137448_12102212	3300011427	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIEHGDEKFAGEVVGFVEQQLRQMS*
Ga0137456_10107511	3300011428	Soil	KLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAALTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137455_10071634	3300011429	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASVMESKWCGLAELVEGRRRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137455_11981761	3300011429	Soil	MLNSMKFLNQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARTAIDYGDESFAGEVVGYVEQRLRQMS*
Ga0137423_10332101	3300011430	Soil	PASDCAELPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLDPVRFLNHLSRLVQRRRSQASAMESKWCGLAELLEVRSRTSKAAQILASPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137464_10907452	3300011434	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137458_10155262	3300011436	Soil	MTRLGRGTMLDTVKLLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAQTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0137429_10082723	3300011437	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASVMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137451_10063183	3300011438	Soil	MRFLKHLSGLVRRQRSQASAIESKWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIDSGDENFAGEVVGFVEQQLRRLS*
Ga0137452_10161824	3300011441	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEERSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137437_11110941	3300011442	Soil	SPIQNEWIDSLTGPQCRLMLKSMRFLRHISRLVQRQPSHVSAMQPEWCGLAELVAGRSRTSKAAQTLALSTAAGVSSWDEIARAAIEYGDENFAGEVVGFVEQQLRQMS*
Ga0137457_10036183	3300011443	Soil	MLNSMKFLNQLSRLLVQRRRSQASAMQSRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARTAIDYGDESFAGEVVGYVEQRLRQMS*
Ga0137463_12249832	3300011444	Soil	MRFLRHLSGLVRRQRSQASAIESKWCGLAELVEGRSRTSKAAQALALSTVAGMSSWDEIARAAIDSGDENFAGEVVGFVEQQLRRLS*
Ga0137427_101063681	3300011445	Soil	QNEWIDSLTGLRRRSMLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIEHGDEKFAGEVVGFVEQQLRQMS*
Ga0137453_10046302	3300012034	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEERRRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137453_10862651	3300012034	Soil	LGRGTMLDTVRFLNHISRLVQRHRSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDETFAGEVVGYVEQKLRQMS*
Ga0137421_11228821	3300012039	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWGGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137461_10055215	3300012040	Soil	DPVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137461_10138031	3300012040	Soil	MLDPVRFLNHLSRLVQRRRSQASAMESKWCGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137328_10008843	3300012113	Soil	MTRLGRGTMLDTVKFLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0137345_10165332	3300012129	Soil	MTRLGRGTMLDTVRFLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIACGDENFAGEVVGYVEQRLRQMS*
Ga0137351_10486821	3300012140	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQILVSPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137343_10011762	3300012142	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQVPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137354_10082132	3300012143	Soil	MLNSMKFLNQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARAAIEYGDESFAGEVVGYVEQRLRQMS*
Ga0137354_10711592	3300012143	Soil	PNTAHAFSRREKSPIQNVWFDSLTGLRRESMLDPVRFLNHLSRLVQRRRSQASAMESKWCGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137322_10364261	3300012146	Soil	MTRLGRGTMLDTVRFLNHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137344_10006762	3300012159	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASVMESKWCGLAELVEGHSRTSKAAQTLALSTAAGMSSWDEIARVAIDYGDENFASEVVGFVEQRLRQMY*
Ga0137349_10781421	3300012160	Soil	GRGTMLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137336_10040613	3300012161	Soil	MLDSVRFLNHLSRLVQRRRSQASAMESKWCGLAELLEVRSRTSKAAQILASPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137336_10214641	3300012161	Soil	MTRLGRGTMLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSFTSKAAQSLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137336_10255263	3300012161	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQNLAFSTAAGMSSWDEIARAAIEHGDEKFAGEVVGFVEQQLRQMS*
Ga0137355_10242391	3300012163	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQVPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARAAIDCGDESFAG
Ga0137342_10349582	3300012171	Soil	MTRLGRGTMLNTVRFLNHISKLVQRRRLQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137327_10482832	3300012173	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLDPVRFLNHLSRLVQRRRSQASAMESKWGGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137321_11181681	3300012175	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQNLAFSTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137334_10020704	3300012179	Soil	MLDSVRFLNHLSRLVQRRRSQASAMESKWGGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0137449_10166983	3300012227	Soil	MLKSMRFLRHISRLVQRQPSHVSAMQSEWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137459_11201381	3300012228	Soil	MLNTVRFLNHISRIVQRRRSQAPAMESRWCGLAELVEVRSFTSKAAQSLALSTDTGISSWDEIARAAIDCGDETFAGEVVGYVEQKLRQMS*
Ga0137459_12532242	3300012228	Soil	MTRLGRGTMLDTVRFLNHISRLVQRHRSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDETFA
Ga0137465_10393132	3300012231	Soil	MLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0137465_11437432	3300012231	Soil	MLNSMKFLNQLSRLVQRRRSQASAMESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARTAIDYGDESFAGEVVGYVEQRLR
Ga0137435_10024064	3300012232	Soil	MLKRMRFLQHISRLVRRQPSHVSAMQPEWCGLAELVEGRSRTSKAAQTLALSTTAGTSSWDEIARAAIEHGDEKFAGEVVGFVERQLRQMS*
Ga0137435_10466171	3300012232	Soil	MPNTAQSISIREKAPIQNVWIDSLTGLGHKSMLKRVRFLIHISRLVRRQRSQKSAMQPEWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIDYGDENFAGEV
Ga0137435_11254371	3300012232	Soil	SPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSRASAMESKWGGLAELVEVRSRTSKTAQALALPTVSGMSSWNEIAQAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0137318_10010632	3300012671	Soil	MTRLGRGTKLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0137341_10019092	3300012676	Soil	NHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0180061_10231262	3300014861	Soil	MPNTAHAFSRREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRRRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0180061_10875681	3300014861	Soil	SMLNSMKFLNQLSRLLVQRRRSQASAMQSRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARTAIDYGDESFAGEVVGYVEQRLRQMS*
Ga0180078_10152242	3300014865	Soil	MTRLGRGTMLDTVRFLNHISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0180095_10373081	3300014871	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQNLAFSTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0180087_10011725	3300014872	Soil	MLDSVRFLNHLSRLVQRRRSQASAMESKWGGLAELLEVRSRTSKAAQILASPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS*
Ga0180084_10583002	3300014874	Soil	MLNSMKLLDQLSRLVQRRRSQASAIESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARVAFDYGDESFAGEVVGYVEQRLRQMS*
Ga0180083_11003061	3300014875	Soil	MTRLGRGTMLDTVRFLNHISRLVQRHRSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0180064_10676121	3300014876	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQTLALSTAAGISSWDEIARAAIEHGDEKFAGEVVGYVEQQLRQMS*
Ga0180065_10227112	3300014878	Soil	MPNSAYAISIREKSPIQNVWFDSLTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0180065_10502312	3300014878	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARVAIDYGDENFASEVVGFVEQRLRQMS*
Ga0180082_11487611	3300014880	Soil	MLNSMKLLDQLSRLVQRRRSQASAIESRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARLAIEYGDESFAGEVVGYVEQRLRQMS*
Ga0180079_10489381	3300015248	Soil	MTRLGRGSMLNTVRFLNHISKLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS*
Ga0180072_10604791	3300015250	Soil	MTRLGRGTMLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS*
Ga0180075_10575592	3300015252	Soil	MLKSMRFLRRISRLVQRQPSHVSAMQSEWCGLAELVEGRSRTSKAAQTLALSTAAGVSSWDEIARAAIEYGDENFAGEVVGFVEQQLRQMS*
Ga0180067_10210152	3300015257	Soil	MTRLGRGTMLDTVRFLNQISKLVQRHRSQAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQRLRQMS*
Ga0180067_10471462	3300015257	Soil	MLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS*
Ga0184628_100121414	3300018083	Groundwater Sediment	MTRLGRGTKLNTVRFLNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0184629_102497682	3300018084	Groundwater Sediment	MLKRMRFLKHLSGLVRRQRSQASAIESKWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARAAIDSGDENFAGEVVGFVEQQLRRLS
Ga0180110_10383152	3300019208	Groundwater Sediment	LTGLRRESMLVSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARAAIDYGDENFAGEVVGYVEQRLRQMS
Ga0180116_12314511	3300019229	Groundwater Sediment	NHISRFVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0180112_10190481	3300019238	Groundwater Sediment	IQNVWFDSLTGLRRESMLDSVRFLNHLSRLVQRRRSQASAMESKWCGLAELVEGRSRTSKAAQTLALPTAAGMSSWDEIARVAIDNGDENFAGEVVGYVEQRLRQMS
Ga0180112_13027523	3300019238	Groundwater Sediment	ISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0180117_10864221	3300019248	Groundwater Sediment	NHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0184648_11232932	3300019249	Groundwater Sediment	SRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0180115_12287002	3300019257	Groundwater Sediment	MTRLGRGTMLDTVRFLNHISRLVQRHRSHAPAMESRWRGLAELVEGRSCTSKAAHTLALSTDTGISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS
Ga0180115_12944501	3300019257	Groundwater Sediment	LNHLSRLVQRRRSQASAMESKWGGLAELLEVRSRTSKAAQILVSPTAAGMSSWDEIARAAIEYGDENFAGEVVGFVEQQLRQMS
Ga0180115_14644691	3300019257	Groundwater Sediment	LNHISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0180107_12890231	3300020064	Groundwater Sediment	HISRLVQRRRSQAPAMESRWCGLAELVEGRSCTSKAAHTLAMSTDTGISSWDEIARAAIDCGDENFAGEVVGYVEQKLRQMS
Ga0180113_12112531	3300020065	Groundwater Sediment	NHISKLVQRRRSQAPAMESRWCGLAELVEGRSYTSKAAQTLALSTDTGISSWDEIARAAIDCGDESFAGEVVGYVEQKLRQMS
Ga0210379_103653842	3300021081	Groundwater Sediment	LRRESMLDSVRFLNHFSRLMQRRRSQASAMESKWCGLAELVEGHSRTSMAAQTLALSTAAGMSSWDEIARAAIDYGDENFAGEVVGFVEQRLRQMS
Ga0208320_10001343	3300027362	Soil	MTRLGRGTMLNTVRFLNHISKLMQRRRSQAPAMESRWCGLAELVEGRSCTSKAAQILALSTDTCISSWDEIARVAIDCGDESFAGEVVGYVEQKLRQMS
Ga0208320_10186692	3300027362	Soil	MLKRMRFLKHISRLVRRQPPHASAMQPEWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARLAIEYGDESFAGEVVGYVEQRLRQMS
Ga0208320_10431311	3300027362	Soil	LTRLRYGPMLKRMRFLKHLSGLVRRQRSPATAMEVHWCGLAEWVDGHSRTGRTAQTLALSTAAGKSSWDEIARAAIDYGDEQFAGEVVGFV
Ga0307281_100243194	3300028803	Soil	MLKRMRFLRHLSGLMRRQRSQASAIESRWCGLAELVEGRSRTSKAAQALALSTAAGMSSWDEIARAALDSGDENFAGEVVGFVEQQLRRLS
Ga0364929_0010979_1624_1923	3300034149	Sediment	MTGLRRKSMLKRMRFLKHISWLVRRQPSHASAMQPEWCGLAELVEGRSRTSKAAQTLALSTAAGMSSWDEIARVAIEHGDEKFAGEVVGFVEQQLRQMS
Ga0364929_0110858_85_363	3300034149	Sediment	MLNSMKFLNQLSRLLVQRRRSQASAMQSRWCGLAELVEERGRTSKAAQTLALPTGAGISSWDEIARTAIDYGDESFAGEVVGYVEQRLRQMS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences