Metagenome / Metatranscriptome Family F094704

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094704
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	116 residues
Representative Sequence	VSIYGPLIDRTHQTWKLHVANVGVALAIAIHAVPRLFLRGIPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWIWRAAKQRAVRWLEWLHEQQVCPVCGSSGELPSDNRRRVP
Number of Associated Samples	73
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	39.05 %
% of genes from short scaffolds (< 2000 bps)	71.43 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.905 % of family members)
Environment Ontology (ENVO)	Unclassified (60.952 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.34% β-sheet: 1.38% Coil/Unstructured: 48.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF07045	DUF1330	20.00
PF00903	Glyoxalase	5.71
PF14329	DUF4386	5.71
PF13302	Acetyltransf_3	4.76
PF09500	YiiD_C	3.81
PF04191	PEMT	2.86
PF04828	GFA	2.86
PF12089	DUF3566	1.90
PF00583	Acetyltransf_1	1.90
PF11225	DUF3024	1.90
PF00561	Abhydrolase_1	1.90
PF02566	OsmC	0.95
PF02371	Transposase_20	0.95
PF13474	SnoaL_3	0.95
PF01042	Ribonuc_L-PSP	0.95
PF03992	ABM	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	20.00
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.86
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.95
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.95
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	2.86 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	1.90 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2.86 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2.86 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2.86 %
Rhodanobacter sp. MP7CTX1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	1.90 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_10057623	All Organisms → cellular organisms → Bacteria → Proteobacteria	2482	Open in IMG/M
3300005542\|Ga0070732_10048873	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300005764\|Ga0066903_102309060	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300005764\|Ga0066903_104849910	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005764\|Ga0066903_105531471	Not Available	666	Open in IMG/M
3300005764\|Ga0066903_105658404	Not Available	657	Open in IMG/M
3300005764\|Ga0066903_106541800	Not Available	607	Open in IMG/M
3300010046\|Ga0126384_10241549	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300010047\|Ga0126382_11649555	Not Available	596	Open in IMG/M
3300010048\|Ga0126373_10192409	All Organisms → cellular organisms → Bacteria	1971	Open in IMG/M
3300010048\|Ga0126373_10710177	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300010048\|Ga0126373_10759522	Not Available	1030	Open in IMG/M
3300010048\|Ga0126373_11000177	Not Available	901	Open in IMG/M
3300010048\|Ga0126373_11894182	Not Available	659	Open in IMG/M
3300010048\|Ga0126373_13303811	Not Available	502	Open in IMG/M
3300010358\|Ga0126370_10143492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1730	Open in IMG/M
3300010361\|Ga0126378_10269643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1800	Open in IMG/M
3300010376\|Ga0126381_100001642	All Organisms → cellular organisms → Bacteria	23902	Open in IMG/M
3300010376\|Ga0126381_100005075	All Organisms → cellular organisms → Bacteria	14418	Open in IMG/M
3300010376\|Ga0126381_100011025	All Organisms → cellular organisms → Bacteria → Proteobacteria	10202	Open in IMG/M
3300010376\|Ga0126381_100117692	All Organisms → cellular organisms → Bacteria → Proteobacteria	3431	Open in IMG/M
3300010376\|Ga0126381_100374384	All Organisms → cellular organisms → Bacteria → Proteobacteria	1976	Open in IMG/M
3300010376\|Ga0126381_102634546	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300010376\|Ga0126381_103035599	Not Available	666	Open in IMG/M
3300010398\|Ga0126383_10099008	All Organisms → cellular organisms → Bacteria → Proteobacteria	2600	Open in IMG/M
3300012971\|Ga0126369_10606968	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300012971\|Ga0126369_13509484	Not Available	514	Open in IMG/M
3300016294\|Ga0182041_10250446	Not Available	1441	Open in IMG/M
3300016294\|Ga0182041_10352502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1237	Open in IMG/M
3300016294\|Ga0182041_12293283	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300016319\|Ga0182033_10311158	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300016341\|Ga0182035_10475096	Not Available	1064	Open in IMG/M
3300016387\|Ga0182040_10474467	Not Available	995	Open in IMG/M
3300016422\|Ga0182039_10129220	Not Available	1920	Open in IMG/M
3300016445\|Ga0182038_10276603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	1362	Open in IMG/M
3300016445\|Ga0182038_10868476	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300016445\|Ga0182038_12153962	Not Available	506	Open in IMG/M
3300017937\|Ga0187809_10039948	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300017959\|Ga0187779_10070254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2067	Open in IMG/M
3300017959\|Ga0187779_10107471	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300017961\|Ga0187778_10011561	Not Available	5491	Open in IMG/M
3300017974\|Ga0187777_10023141	All Organisms → cellular organisms → Bacteria → Proteobacteria	3955	Open in IMG/M
3300017975\|Ga0187782_10807024	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300018062\|Ga0187784_10129159	Not Available	2064	Open in IMG/M
3300021560\|Ga0126371_10387033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1538	Open in IMG/M
3300021560\|Ga0126371_11122114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	925	Open in IMG/M
3300027842\|Ga0209580_10100653	Not Available	1397	Open in IMG/M
3300031544\|Ga0318534_10020437	All Organisms → cellular organisms → Bacteria → Proteobacteria	3510	Open in IMG/M
3300031544\|Ga0318534_10085484	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300031544\|Ga0318534_10148196	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300031545\|Ga0318541_10237447	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300031561\|Ga0318528_10708467	Not Available	539	Open in IMG/M
3300031572\|Ga0318515_10012685	All Organisms → cellular organisms → Bacteria → Proteobacteria	3819	Open in IMG/M
3300031573\|Ga0310915_10371953	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300031573\|Ga0310915_10648881	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031640\|Ga0318555_10257988	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031679\|Ga0318561_10033415	All Organisms → cellular organisms → Bacteria	2498	Open in IMG/M
3300031681\|Ga0318572_10106266	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300031681\|Ga0318572_10331692	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300031682\|Ga0318560_10027115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2677	Open in IMG/M
3300031682\|Ga0318560_10143416	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300031715\|Ga0307476_10081486	All Organisms → cellular organisms → Bacteria	2259	Open in IMG/M
3300031719\|Ga0306917_10106710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	2019	Open in IMG/M
3300031720\|Ga0307469_11392943	Not Available	668	Open in IMG/M
3300031747\|Ga0318502_10353110	Not Available	870	Open in IMG/M
3300031747\|Ga0318502_10435790	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031764\|Ga0318535_10571583	Not Available	501	Open in IMG/M
3300031765\|Ga0318554_10007612	All Organisms → cellular organisms → Bacteria	5245	Open in IMG/M
3300031770\|Ga0318521_10182203	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300031777\|Ga0318543_10495790	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300031779\|Ga0318566_10019038	All Organisms → cellular organisms → Bacteria → Proteobacteria	3014	Open in IMG/M
3300031779\|Ga0318566_10164088	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300031782\|Ga0318552_10057513	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300031795\|Ga0318557_10042480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1889	Open in IMG/M
3300031798\|Ga0318523_10590640	Not Available	547	Open in IMG/M
3300031805\|Ga0318497_10016167	All Organisms → cellular organisms → Bacteria → Proteobacteria	3551	Open in IMG/M
3300031821\|Ga0318567_10526100	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031823\|Ga0307478_10122575	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300031833\|Ga0310917_10309584	Not Available	1069	Open in IMG/M
3300031879\|Ga0306919_10351602	Not Available	1126	Open in IMG/M
3300031890\|Ga0306925_10629858	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300031893\|Ga0318536_10315371	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031896\|Ga0318551_10630515	Not Available	619	Open in IMG/M
3300031910\|Ga0306923_10056398	All Organisms → cellular organisms → Bacteria → Proteobacteria	4351	Open in IMG/M
3300031910\|Ga0306923_11360058	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031954\|Ga0306926_10004713	All Organisms → cellular organisms → Bacteria	14358	Open in IMG/M
3300031954\|Ga0306926_10270907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	2103	Open in IMG/M
3300031959\|Ga0318530_10066542	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300031962\|Ga0307479_10144001	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300032001\|Ga0306922_11779902	Not Available	607	Open in IMG/M
3300032009\|Ga0318563_10028377	All Organisms → cellular organisms → Bacteria → Proteobacteria	2786	Open in IMG/M
3300032025\|Ga0318507_10188742	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300032039\|Ga0318559_10597370	Not Available	515	Open in IMG/M
3300032043\|Ga0318556_10027863	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300032044\|Ga0318558_10420692	Not Available	665	Open in IMG/M
3300032052\|Ga0318506_10309680	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300032063\|Ga0318504_10580990	Not Available	538	Open in IMG/M
3300032068\|Ga0318553_10302467	Not Available	837	Open in IMG/M
3300032076\|Ga0306924_10084664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3561	Open in IMG/M
3300032090\|Ga0318518_10006512	All Organisms → cellular organisms → Bacteria	4597	Open in IMG/M
3300032091\|Ga0318577_10255336	Not Available	839	Open in IMG/M
3300032094\|Ga0318540_10206704	Not Available	946	Open in IMG/M
3300032094\|Ga0318540_10314904	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300032261\|Ga0306920_100032690	All Organisms → cellular organisms → Bacteria	7440	Open in IMG/M
3300033289\|Ga0310914_10444428	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.05%
Aquatic	Environmental → Aquatic	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.05%
Freshwater	Environmental → Aquatic → Freshwater	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.71%
Loam	Environmental → Terrestrial → Soil → Loam	4.76%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.95%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	64.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.76%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.05%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.95%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0008090_100576235	3300005363	Tropical Rainforest Soil	VSIYGPLIDRTHQTWKLHVANAGVALALVMHAVPRWFLHGIPDRHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRTVRWLEWLHEQQVCPVCGSNGDLPPDSRDR*
Ga0070732_100488735	3300005542	Surface Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVIHVVARWFVHGITGRELAIFSGASAAIAAASLFIFFGTVSCPVCGANWVWRAIRERAGRWLEWLREQQVCPVCGSSGNVPPGSWRAE*
Ga0066903_1023090602	3300005764	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANAGVALALVMHAVPRWFLHGIPDRHFAAYSGLSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGGLPSDNRDR*
Ga0066903_1048499101	3300005764	Tropical Forest Soil	HQTWKLHVANVGVALAIAIHAVPRLFLLEIPDRLSAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSDGGLPSENRHKGR*
Ga0066903_1055314711	3300005764	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANVGVALAIAMHAVLRLFLRGTPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGELPPANRRSGP*
Ga0066903_1056584041	3300005764	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISGRYFAVYSGLSALVAAAGLFIHFGAVRCPFCGTHWVWRATKQRAVRWLQWLHEQQVCPVCGSSGDLPPDDRSRA*
Ga0066903_1065418002	3300005764	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANVGVVLSLAIHALPRLFLRGVPDRLLAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAATQRAMRWLEWLHEQQVCPVCGSDGEPRSDNRRRAP*
Ga0126384_102415491	3300010046	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISGRYFAVYSGFSALVAAAGLFVHFGTVRCPFCGTHWVWRATKQRAVRWLEWLHEQQVCPVCGSSGDLPPDDRSRVS*
Ga0126382_116495551	3300010047	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGTSGRYFAVYSGLSALVAAAGLFVHFGTVRCPFCGTHWVWRATKQRAVRWLEWLHEQQVCPVCGSSGDLPPDDRSRVS*
Ga0126373_101924091	3300010048	Tropical Forest Soil	VSSYGPLIDRTHQAWKLHLATIGVVLAIVVHVAARLFLHGITGRELALYSGASAIIAAVSLLMFFVSVRCPVCGANWIWRAARERSGRWLEWLHEQQVCPVCGSSGDLPSKP*
Ga0126373_107101772	3300010048	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANVGVALAIAIHALPRLFLRGIPDRLSAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPSENHGSGP*
Ga0126373_107595222	3300010048	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHLANIGVVLAIVLHAVPRWLLHGISGRYFAVYSGLSALVAAAGLFIHFGTVRCPFCGTHWVWRATKQRAVRWLQWLHEQQVCPVCGSSGDLPPDDRSRA*
Ga0126373_110001772	3300010048	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVSAIVIHAVPRWFLRGIPQLHFAVYSGVSALVAAAGLFIYFGTVRCPFCGTHWVWRAARERAVRWLEWLHQQQVCPVCGSNGERPPDNRWSDT*
Ga0126373_118941821	3300010048	Tropical Forest Soil	CPLTIVSARWQVSIYGPLIDRTHQTWKLHVANIGVASALVMHAVPRWFLHGIPDRHFAIYSGLSALVAAAGLFIYFGTVRCPVCGANWVWRAAKQRPVRWLEWLHEQQVCPVCGSNGDLPPDNRRGGP*
Ga0126373_133038111	3300010048	Tropical Forest Soil	AGSHASTRTAPADSQVSIYGPLIDRTHQAWKLHIATIGVVLSIVVHVVARWFLPGITGRELALYSGASAMIAAISLFIFFGSVRCPACGANWMWCATRQRTGRWLQWLHEQQACPMCGSSGDSQPGDRSP*
Ga0126370_101434923	3300010358	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISGRYFAVYSGFSALVAAAGLFVHFGTVRCPFCGTHWVWRATKQRAVRWLQWLHEQQVCPVCGSSGDLPPDDRSKA*
Ga0126378_102696432	3300010361	Tropical Forest Soil	MSIYGPLIDRTHQAWKLHVANVGVALAIAIHALARLFLRGIPGRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEPQTDNRRRAP*
Ga0126381_10000164233	3300010376	Tropical Forest Soil	VSSYGPLIDRTHQAWKLHLATIGVVLAIVIHVVARLFLRGITGRELALYSGASAIIAAVSLLIFFGSVRCPVCRANWIWRAARQRSGRWLEWLHEQQVCPVCGSSGDLPSRP*
Ga0126381_10000507518	3300010376	Tropical Forest Soil	VSSYGPLIDRTHQAWKLHLATIGVVLAIVVHVAARLFLHGITGRELALYSGVSAIIAAVSLLMFFVSVRCPVCGANWIWRAARERSGRWLEWLHEQQVCPVCGSSGDLPSKP*
Ga0126381_1000110257	3300010376	Tropical Forest Soil	MSIYGPLIDRTHQAWKLHVANVGVALAIAIHALARLLLRGIPGRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEPQTDNRRRAP*
Ga0126381_1001176927	3300010376	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVSAIVIHAVPRWLLHGVSARYFAVYSGLSALVAAAGLFIHFATVRCPFCGTHWVWRATKQRAVRWLQWLHEQQVCPVCGSSGDLPPDDRSRA*
Ga0126381_1003743844	3300010376	Tropical Forest Soil	YGPLIDRTHQAWKLHVANIGVVLAIVIHAVPRWFLHGIPNRHFAVYSGVSALVAAAGLFIYFGTVRCPVCGTHWVWRAAKHRAVRWLEWLHQQQVCPVCGSNGDLPPDSRWRAT*
Ga0126381_1026345462	3300010376	Tropical Forest Soil	RQPRSVGASPWLRNLPLRWPVSIYGPLIDRTHQTWKLHVANVGVALAIAIHAVPRLFLRGIPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAARQRTVRWLEWLHEQQVCPVCGSNGEPPSDHRRRGP*
Ga0126381_1030355991	3300010376	Tropical Forest Soil	IVSVRWQVSIYGPLIDRTHQTWKLHVANAGVALALVMHAVPRWFLHGIPDRHFAAYSGLSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDLPSDNRDR*
Ga0126383_100990085	3300010398	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISARYFAVYSGLSALVAAAGLFIYFGTVRCPFCGTHWVWRATKQRTVRWLEWLHEQQVCPVCGSSGDRPPDDRSRVS*
Ga0126369_106069682	3300012971	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISGRYFAVYSGLSALVAAAGLFIHFATVRCPFCGTHWVWRATKQRAVRWLQWLHEQQVCPVCGSSGDLPPDDRSRA*
Ga0126369_135094841	3300012971	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANVGVALAIAMHAVLRLFLRGTPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSDGERPPDSRQSGP*
Ga0182041_102504462	3300016294	Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAVVIHAVPRWFLHRIPDRHFAVYSGVSALVAADGLFIYFGTVRCPVCGTHWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGELPSDKRSREAKDL
Ga0182041_103525021	3300016294	Soil	VSIYGPLIDRTHQTWKLHVANIGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGSVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDPPSDNRDR
Ga0182041_122932831	3300016294	Soil	NVGVLLAMVIHAVARWVLRGITGRELALFSGASALIAAVSLVIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0182033_103111583	3300016319	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHRKGL
Ga0182035_104750962	3300016341	Soil	MSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0182040_104744672	3300016387	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGKGL
Ga0182039_101292205	3300016422	Soil	FPLRWPMSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPSDSHGKGL
Ga0182038_102766031	3300016445	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGVPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDNRRRAP
Ga0182038_108684762	3300016445	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVFSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGKGL
Ga0182038_121539622	3300016445	Soil	QVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITGRELALFSGASALIAASSLVIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVPPDKDLER
Ga0187809_100399482	3300017937	Freshwater Sediment	VISYGPLIDRTHQAWKLHAVNIGVLLAIVIHVIARWALPGISRRELALFSGASAVIAALSLLIFFGTVRCPACGANWVWRATKERAGRWLQWLHEQQVCPVCGSSGNVPSDRRWGAE
Ga0187779_100702541	3300017959	Tropical Peatland	VSIYGPLIDRTHQTWKLHVANVGVALAIAIHAVPRLFLRGIPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWIWRAAKQRAVRWLEWLHEQQVCPV
Ga0187779_101074712	3300017959	Tropical Peatland	VSIYGPLIDRTHQTWKLHVANIGVALAIVIHAAPRWLRHGIPDRYFAVYSGLSALVAAAGVFIYFGTVRCPFCGTHWVWRATKQRAVRWLEWLHEQQVCPGCGSSGDQPPDSRCTHKD
Ga0187778_100115612	3300017961	Tropical Peatland	MRPRLESGVCARPLNFTVRWQVSAYGPLIDRTHQAWKLHVATMGVLLAVGIHVVARLFLPGVTGRELALYSGASAIIAAVSLFIFFWSVRCPACGANWIWRAAKQRSGPWLQWLHEQQVCPVCGSTGDLPPNNRCRGP
Ga0187777_100231417	3300017974	Tropical Peatland	VSIYGPLIDRTHQTWKLHVANVGVALAIAIHAVPRLFLRGIPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWIWRAAKQRAVRWLEWLHEQQVCPVCGSSGELPSDNRRRVP
Ga0187782_108070241	3300017975	Tropical Peatland	VIQTRVRGIRERPVVPRQRFRWLVISYGPLIDRTHQAWKLHVANIGVVLALVIHAVPRWVLHGIPDRQIAVYAGASALIAAASVFLYFGTVRCPTCGANWVWRAAKQRPGRWLEWLHEQQICPVCGSNDDLPPNIRWRGP
Ga0187784_101291593	3300018062	Tropical Peatland	VISYGPLIDRTHQAWKLHAANIGVVLAIVIHAVPRWVLHGIPDRQIAVYAGASALIAAASVFLYFGTVRCPTCGANWVWRAAKQRPGRWLEWLHEQQICPVCGSNDDLPPNIRRRGP
Ga0126371_103870333	3300021560	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANVGVALAIAMHAVLRLFLRGTPDRLFAVYSGVSALVAAGGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGELPPANRRSGP
Ga0126371_111221141	3300021560	Tropical Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAIVIHAVPRWLLHGISGRYFAVYSGLSALVAAAGLFIHFGTVRCPFCGTHWVWRATKQRAVRWLQWLHEQQ
Ga0209580_101006532	3300027842	Surface Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVIHVVARWFVHGITGRELAIFSGASAAIAAASLFIFFGTVSCPVCGANWVWRAIRERAGRWLEWLREQQVCPVCGSSGNVPPGSWRAE
Ga0318534_100204377	3300031544	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPSDSHGKGL
Ga0318534_100854843	3300031544	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0318534_101481961	3300031544	Soil	WQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318541_102374472	3300031545	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDKRRRAP
Ga0318528_107084671	3300031561	Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318515_100126854	3300031572	Soil	VSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDPPSDNRDR
Ga0310915_103719531	3300031573	Soil	SGASGRSRSFPLRWPMSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPSDSHGKGL
Ga0310915_106488811	3300031573	Soil	LIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318555_102579881	3300031640	Soil	GCEHRTRRSVAGSSARPLNFTTRWQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVPPDKDLER
Ga0318561_100334151	3300031679	Soil	IVSVRWQVSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFFHGIPDRHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDPPSDNRDR
Ga0318572_101062661	3300031681	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDDRCKSP
Ga0318572_103316923	3300031681	Soil	SYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318560_100271155	3300031682	Soil	VAGSSARPLNFTTRWQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318560_101434162	3300031682	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDNRRRAP
Ga0307476_100814863	3300031715	Hardwood Forest Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVIHVVARWFVHGITGRELAIFSGASAAIAAASLFIFFGTVRCPVCGANWVWRAIRERAGRWLEWLREQQVCPVCGSSGNVPPGSWRAE
Ga0306917_101067102	3300031719	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGKGL
Ga0307469_113929431	3300031720	Hardwood Forest Soil	VSSYGPLIDRTHQAWKLHAANVGVALAIALHVVARWFVPGITGRELAVCSGASALIAAVSLFIFFGAVRCPACGAKWVWRAVRQRAGRWLEWLHEQQVCPVCGSMGDLLQPNNRWKGP
Ga0318502_103531101	3300031747	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVC
Ga0318502_104357901	3300031747	Soil	HQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318535_105715831	3300031764	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAARQRAMRWLEWLHEQQVCPVCGSDGEPRSDNRRRAP
Ga0318554_100076123	3300031765	Soil	VAGSSARPLNFTTRWQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVPPDKDLER
Ga0318521_101822031	3300031770	Soil	YGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGESRSDKRRRAP
Ga0318543_104957901	3300031777	Soil	WWTVSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0318566_100190383	3300031779	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPSDSHGKGL
Ga0318566_101640883	3300031779	Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCG
Ga0318552_100575131	3300031782	Soil	VSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDP
Ga0318557_100424803	3300031795	Soil	MSIYGPLIDRTHQTWKLHVDNVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGKGL
Ga0318523_105906401	3300031798	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPD
Ga0318497_100161671	3300031805	Soil	YGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0318567_105261001	3300031821	Soil	IVSVRWQVSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDPPSDNRDR
Ga0307478_101225754	3300031823	Hardwood Forest Soil	VSIYGPLIDRTHQTWKLHVANIGVASAIVIHAAARLFFHGKPDRLFAVYSGVSALVAAAGLFIHFGTVRCPVCGAHWVWRAAKQRALRWLEWLHEQQVCPVCGSNGDLPSDNRCRGS
Ga0310917_103095843	3300031833	Soil	VSIYGPLIDRTHQTWKLHVANIGVVLAVVIHAVPRWFLHRIPDRHFAVYSGVSALVAAAGLFIYFGTVRCPVCGTHWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGELPSDKRSREAKDL
Ga0306919_103516023	3300031879	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDNRRRAP
Ga0306925_106298582	3300031890	Soil	MSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFVRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDKRRRAP
Ga0318536_103153713	3300031893	Soil	IVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0318551_106305152	3300031896	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRAAKQRAVRWLEWLHEQQVCPVCGSTGDVPPDDRCKSP
Ga0306923_100563989	3300031910	Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVPPDKDLER
Ga0306923_113600582	3300031910	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGVPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDKRRRAP
Ga0306926_1000471310	3300031954	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDAPPDNRCKSP
Ga0306926_102709075	3300031954	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSDGELPSANR
Ga0318530_100665421	3300031959	Soil	LHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER
Ga0307479_101440011	3300031962	Hardwood Forest Soil	MSIYGPLIDRTHQTWKLHVANIGVALGIVIHAVPRWFFHGISARDFAVYSGLSALVAAAGLFIYFGTVRCPFCGTHWVWRAAKQRTVRWLEWLHEQQVCPVCGSSGDLPPSDNRRMAP
Ga0306922_117799021	3300032001	Soil	VSIYGPLIDRTHQTWKLHVANVGVALAIAMHAVLRLFLRGIPDRLFAVYSGVSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSDGELPSANRRSGP
Ga0318563_100283777	3300032009	Soil	RRSVAGSSARPLNFTTRWQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVPPDKDLER
Ga0318507_101887422	3300032025	Soil	VSIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRAAKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0318559_105973701	3300032039	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGSDGEPRSDKRRRAP
Ga0318556_100278634	3300032043	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGKGL
Ga0318558_104206921	3300032044	Soil	CRLTIVSVRWQVSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGDPPSDNRDR
Ga0318506_103096802	3300032052	Soil	IYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0318504_105809902	3300032063	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGVPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAARQRAMRWLEWLHEQQVCPVCGSDGEPRSDNR
Ga0318553_103024672	3300032068	Soil	VISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGN
Ga0306924_100846643	3300032076	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGERPSDNHGRGP
Ga0318518_1000651210	3300032090	Soil	VSIYGPLIDRTHQTWKLHVANSGVALALVMHAVPRWFLHGIPARHFAAYSGVSALVAAAGLFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPV
Ga0318577_102553362	3300032091	Soil	MSIYGPLIDRTHQTWKLHVANVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAARQRAVRWLEWLHEQQVCPVCGSNGEQPTDSHGK
Ga0318540_102067041	3300032094	Soil	VSIYGPLIDRTHQAWKLHVANVGVVLSIAIHALPRLFLRGIPDRLFAVYSGLSALVAAAGVFIYFGTVRCPVCGANWVWRAAKQRAMRWLEWLHEQQVCPVCGS
Ga0318540_103149041	3300032094	Soil	SIYGPLIDRTHQTWKLHVANIGVVSSLVIHAVPRWLLHGVAGGYFAVYSGVSALVAAAGVFIYFGAVKCPVCGAHWVWRATKQRAVRWLEWLHEQQVCPVCGSTGDVPPDNRCKSP
Ga0306920_1000326902	3300032261	Soil	MSIYGPLIDRTHQTWKLHVATVGVGLAMAIHAVPRLFFRGVPDRLLAVYSGVSALVAAVGVFIYFGTVRCPVCGANWVWRAAKQRAVRWLEWLHEQQVCPVCGSNGEQPSDSHGKGL
Ga0310914_104444283	3300033289	Soil	RRSVAGGSARPLNFTTRWQVISYGPLIDRTHQAWKLHAVNIGVLLAIVVHAVARWVLRGITARELALFSGASALIAAGSLFIFFGTVRCPACGANWAWRAIKARAGRWLEWLREQQACPVCGASGNVAPDKDLER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094704

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences