Basic Information | |
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Family ID | F094685 |
Family Type | Metagenome |
Number of Sequences | 105 |
Average Sequence Length | 64 residues |
Representative Sequence | MNTDDPIIAAIEAHRRACAETCAAYERRSVVEDELVAGVRVSAGEAENDPRWIAANDAAEEAL |
Number of Associated Samples | 63 |
Number of Associated Scaffolds | 105 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 71.43 % |
% of genes near scaffold ends (potentially truncated) | 92.38 % |
% of genes from short scaffolds (< 2000 bps) | 91.43 % |
Associated GOLD sequencing projects | 55 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.61 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (74.286 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.762 % of family members) |
Environment Ontology (ENVO) | Unclassified (83.810 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (49.524 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 56.04% β-sheet: 0.00% Coil/Unstructured: 43.96% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.61 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Watersheds Tropical Forest Soil Soil Soil Hardwood Forest Soil Tropical Peatland Tropical Forest Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Ga0066388_1013528293 | 3300005332 | Tropical Forest Soil | MDTSDPIIAAIEAHRRACAVTRAAFERQSAVEDELGAGARMPAGEAESDPRWIAANDTAAKALAV |
Ga0066903_1045845471 | 3300005764 | Tropical Forest Soil | MIRGQMNTHDPIIAVIEAHRRAYAETCAAYERLSVVEAELVAGVRVSAGEAENDPRWIA |
Ga0066903_1049729672 | 3300005764 | Tropical Forest Soil | MSTKDPIIAAIEAHRRARDETCAAYERQTAVENKLATGGRVRVGEVEYDPEWIAANNAVGEALAV* |
Ga0066903_1078101881 | 3300005764 | Tropical Forest Soil | MNTDDPIIAVIEAHRRARTETLAAYERLSVLEAELVAGVRVSAGEAENDPRWIAANDAAGDALAVQDDLAVK |
Ga0075017_1008156671 | 3300006059 | Watersheds | MNTDDPIIAAIEAHRRACAETCAAYERRSVVEDELVAGVRVSAGEAENDPRWIAANDAAEEAL |
Ga0075019_101700331 | 3300006086 | Watersheds | MNNDDPIIAAIEAHRHACAETWAAYERRNAVEDELVAGVRGPAGEAESDPHWIAADDAAGEALVVQDDLALKLRETQPTTIAAPPHFSPIMSML* |
Ga0126370_112971453 | 3300010358 | Tropical Forest Soil | MNTPDPIIAAIEAHRRACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDATGEALAVQDDLALKLLET |
Ga0126370_119570611 | 3300010358 | Tropical Forest Soil | MSTKDPIIAAIEAHRRARDETCAAYERQTAVENKLAAGVRVPVGEVEYDPEWIAANNAVGEALAVQDDLGV |
Ga0126378_129207192 | 3300010361 | Tropical Forest Soil | MNTPDPIIAAIEAHRRACAETCAAYEHQNTVEHELATGVRVPAGEAENDLQWI |
Ga0126381_1045662551 | 3300010376 | Tropical Forest Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWVAANAVAGETLAAQDDLAMKLLETQPTT |
Ga0126369_120220411 | 3300012971 | Tropical Forest Soil | MNTDDPIIAVIEAHRRACAETRAAYERLNVVEDELVAGVRVSAGEAENDPRWIAANDAAG |
Ga0126369_130366811 | 3300012971 | Tropical Forest Soil | VIRGQVNTHDPIIAVIEAHRRAYAETCAAYERFSVVEAELVAGVRVSAG |
Ga0182036_105117181 | 3300016270 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDELVAGVRVPAGEAESDPQWIAADDAAGE |
Ga0182041_100152746 | 3300016294 | Soil | MNINDPIIAAIEAHRRACAETRAAYERQSAVEDELGAGVRVLAGEAENDPRWIAVHGTAAKALAVQD |
Ga0182041_104096772 | 3300016294 | Soil | MNTPDPIIAAIEAHRRAYAETCAAYDHQSAVEHEIVAGGRVSPGEAESDLQWIAANDAAGEALTVQDDLALKLLSRAPPHSSPIMSML |
Ga0182033_100504133 | 3300016319 | Soil | MNINDPIIAAIEAHRRACAETRAAYERQSAVEDELGAGVRVLAGEAENDPRWIAVHGTAAKALAV |
Ga0182033_104643741 | 3300016319 | Soil | MNADDPIIAVIEAHRRAYSETRAAYERLSVVEAELVAGARVSAGVAENDSRWIAANDAAGDALAVQDDLVMKLIET |
Ga0182033_105862262 | 3300016319 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDELVAGVRVPAGEAESDPQWIAADDAAGEALAVQDDLAVKLL |
Ga0182033_107886651 | 3300016319 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESD |
Ga0182033_108680003 | 3300016319 | Soil | AIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQ |
Ga0182033_111877193 | 3300016319 | Soil | MNTDDPIIAAIEVHRRACAATRAAYERLSAVEDEFVARVRVPAGEAENDPQWIAPEDAAG |
Ga0182035_115898171 | 3300016341 | Soil | IAVIEANRRAYSETRAAYERLSVVEAELVAGDRVSAGEAENDPRWIAANDAAGDALAVQDGLVMKLLETQPKARWGPKISTLVWS |
Ga0182035_120285502 | 3300016341 | Soil | MNTDDPIIAAIEAHRRACVESRAAYERLSAVEDELMARVRVPAGEAENDPEWIAANDAAGEALAVQDDLAV |
Ga0182040_101276763 | 3300016387 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAANAIAGETLAAQDDLAMKLLETQPTT |
Ga0182037_103034923 | 3300016404 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQWIAADDAAGEALAVQ |
Ga0182037_105856612 | 3300016404 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDA |
Ga0182037_109569521 | 3300016404 | Soil | MNINDPIITAIEAHRRACAETRAAYERQSAVEDELGAGVRVLAGEAENDPRWIAVHGTAAKALAVQDDLAVELLET |
Ga0182039_101304502 | 3300016422 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTVQDDLAVKLLETR |
Ga0187783_110096671 | 3300017970 | Tropical Peatland | MNTNDPIIAALEAHRRACAKTRAAFENQSSIENELVAGAGVTAGEAENDPRWVAANAAVGEALAVQDDLAVRL |
Ga0187823_101579491 | 3300017993 | Freshwater Sediment | MNTDDPIIAAIEAHRRAYAETCAAYERRSAVEDELAAGVRVPAGEAENDPQWIAANDAAGEALAVQDDLAVE |
Ga0209067_103721761 | 3300027898 | Watersheds | MNNDDPIIAAIEAHRHACAETWAAYERRNAVEDELVAGVRGPAGEAESDPHWIAADDAAGEALVVQDDLALKLRETQPT |
Ga0318516_102942492 | 3300031543 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPAGEAESDPQW |
Ga0318515_104583941 | 3300031572 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTVQDDLA |
Ga0310915_101288913 | 3300031573 | Soil | MNTNDPIIAAIEAHRRACAETRAAYERLTAGENEFVARVRVPAGEAENDPQWIAAEDAAGEALALQDDLAVKLLET |
Ga0310915_106719422 | 3300031573 | Soil | MNCSDPIIAAIEAHRRACAQTRAAYERLTAVEEELGAGIRVPAGDVEND |
Ga0310915_109230191 | 3300031573 | Soil | MNTDDPIIAVIEAHRRACAETCVAYEHLSVVETELVAGVRVSAGEAENDPQWIAANDAAGEALAV |
Ga0318561_102626561 | 3300031679 | Soil | IEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQ |
Ga0318561_104083581 | 3300031679 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTV |
Ga0318496_105013321 | 3300031713 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTVQDD |
Ga0306917_102220531 | 3300031719 | Soil | MNTDDPIIAVIEAHRRACAETCVAYEHLSVVETELVAGVRVSAGEAEND |
Ga0306917_107160221 | 3300031719 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAANAVAGETLAAQDDLAMKLL |
Ga0306918_103338762 | 3300031744 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTVQD |
Ga0318502_104294531 | 3300031747 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPAGEAESDPQWVAADDAAGEALAVQDD |
Ga0318492_104219931 | 3300031748 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPAGEAESDPQWVAADDAAGEALAVQDDLAVKL |
Ga0307477_101870881 | 3300031753 | Hardwood Forest Soil | MNTDDPIIAAIEVHRRACAETCAAYERRSVVEDELVAGVRVSAGE |
Ga0318509_105576332 | 3300031768 | Soil | MNTDDPIIAAIEAHRRACVESRAAYERLSAVEDELMARVRVPAGEAENDPEWIAAND |
Ga0318546_103858802 | 3300031771 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPR |
Ga0318546_108291612 | 3300031771 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDATGEAVAVQDD |
Ga0318546_110681202 | 3300031771 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPADEAESDPQWIA |
Ga0318543_104961801 | 3300031777 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAANAVA |
Ga0318508_11877691 | 3300031780 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAAEDAAGEALALQDDLAVKL |
Ga0318547_101967601 | 3300031781 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAENDPEWIAANDAAGE |
Ga0318548_101247223 | 3300031793 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQWIAA |
Ga0318550_101351053 | 3300031797 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAENDPEWIAAN |
Ga0310917_101184731 | 3300031833 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIA |
Ga0306919_100173181 | 3300031879 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAENDPEWIAANDAAEE |
Ga0306919_115377931 | 3300031879 | Soil | MNTDDPIIAVIEAHRRACAETCVAYEHLSVVETELVAGVRV |
Ga0318544_100743301 | 3300031880 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQ |
Ga0306925_100431758 | 3300031890 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAESDPQWISADDAAGEALAVQDDLAVKLLETQ |
Ga0306925_104175343 | 3300031890 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAANAIAGETLAAQDDLAMKLLETQPTTIGGAAA |
Ga0306925_120829611 | 3300031890 | Soil | AHRRAYAETCAAYDHQSAVEHEIVAGGRVSPGEAESDLQWIAANDAAGEALTVQDDLALKLLSRAPPHSSPIMSML |
Ga0318536_106711011 | 3300031893 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAA |
Ga0306923_100748377 | 3300031910 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAESDPQWMSADDAAGE |
Ga0306923_105204231 | 3300031910 | Soil | MDDPIIAAIEAHRRACAETSAAYERRNAVEDEIVAGIRVPAGEAESDPQWIAADDAAGEALAVQDDLA |
Ga0306923_108802892 | 3300031910 | Soil | MNTHDPIIAVIEAHRRAYAETCAAYERLSVVETELVAGVRVSAGEAENDPRWIAANDAAG |
Ga0306921_104107273 | 3300031912 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAAN |
Ga0306921_119088961 | 3300031912 | Soil | MNSDDPIIAVIEAHRRACAETRAAFEHQSAVENELVAGAQVSAGEAENGPQ |
Ga0306921_123140761 | 3300031912 | Soil | DPIIAVIEAHRRAFAETCAAYERLSVVEAELVAGDRVSAGEAENDPRWIAANDAAGDALAVQDGLVMKLLETQPKARWGPKISTLVWS |
Ga0310912_100571461 | 3300031941 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDATGEAVAVQDDLALKLLETK |
Ga0310912_107078902 | 3300031941 | Soil | MNTDDPIIPAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAEND |
Ga0310912_109582821 | 3300031941 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAA |
Ga0310916_101783313 | 3300031942 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAG |
Ga0310916_109270342 | 3300031942 | Soil | MDDPIIAAIEAHRRACAETSAAYERRNAVEDEIVAGIRVPAGEAESDPQWIAADDAAGEALAVQDDLAVKLLETQPTTIA |
Ga0310916_115731521 | 3300031942 | Soil | MNTHDPIIAVIEAHRRAYAETCAAYERLSVVEAELVAGVRVSAGEAE |
Ga0310913_106439591 | 3300031945 | Soil | MNADDPIIAVIEAHRRAYSETRAAYERLSVVEAELVAGDRVSAGEAENDPRWIAAN |
Ga0310910_112792711 | 3300031946 | Soil | MNTDDPIIAAIEAHRRACVESRAAYERLSAVEDELMARVRVPAGEAENDPEWIAANDAAGEAL |
Ga0310909_100264101 | 3300031947 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAESDPQW |
Ga0310909_103938202 | 3300031947 | Soil | MIRGQMNTHDPIIAVIEAHRRAYAETCAAYERLSVVEAELVAGVRVSAGEAENDPRWIAANDAAGD |
Ga0310909_105569512 | 3300031947 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDAAGEALAVQDD |
Ga0310909_107048301 | 3300031947 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQWIAADDAAGEALAVQDDLAVKLLETQ |
Ga0310909_114029131 | 3300031947 | Soil | MNTDDPIIAAIEAHRHTCAETRAAFEHQSAVENELVARAQVSAGEAEND |
Ga0306926_100110407 | 3300031954 | Soil | MNINDPIIAAIEAHRRACAETRAAYERQSAVEDELGAGVRVLAGEAENDPRWIAVHGTAAKALAVQDDLAVKLLEPDQRPSPAPPRS |
Ga0306926_104656581 | 3300031954 | Soil | MNTDDPIIAVIEAHRRACAETCVAYEHLSVVETELVAGVRVSAGEAENDP |
Ga0318530_103846591 | 3300031959 | Soil | MIRGQMNTHDPIIAVIEAHRRAYAETCAAYERLSVVEAELVAGVRVSAGEAENDPRWIAANDAAGDALAVQDDLAVKLLETKPTTI |
Ga0318531_103263461 | 3300031981 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQWIAADDAAGEA |
Ga0306922_103432564 | 3300032001 | Soil | MNTHDPIIAVIEAHRRAYAETCAAYERLSVVETELVAGVRVSAGEAENDPRWIAANDAAGDALAV |
Ga0310911_100837351 | 3300032035 | Soil | MNTDPIIAAIEAHRRACAVTRAAFERRSAVEDEFVAGVRVPAGEAENDPEWIAANDAAGEALAVQDDLAVKLLEI |
Ga0310911_104326032 | 3300032035 | Soil | MNTDDPIIAAIEAHRQACAETCAAYEHQNAVEHELATGVRVPAGEAENDLQWIAANDAA |
Ga0318549_100892161 | 3300032041 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPHWIAADDAAGEALAVQDDLAVKLLE |
Ga0318533_101425121 | 3300032059 | Soil | MIRGQMNTHDPIIAVIEAHRRAYAETCAAYERLSVVEAELVAGVRVSAGEAENDPR |
Ga0318505_105934391 | 3300032060 | Soil | MDDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAARALTVQ |
Ga0318510_100706902 | 3300032064 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPADEAESDPQWIAADDAAGEALAVQDDLAVK |
Ga0306924_107523781 | 3300032076 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVQDEIVAGVRVPVGEAESDPQWIAAD |
Ga0306924_120002752 | 3300032076 | Soil | MNTDDPIIAAIEAHRRACVESRAAYERLSAVEDELMARVRVPAGEAENDPEWIAANDAAGEALAV |
Ga0306924_121837531 | 3300032076 | Soil | MDTSDPIIPAIEAHRRACAVTRAAFERQSAVEDELGAGARMPAGEAESDPRWIAANDTAAKALAVQDELAVKLL |
Ga0306924_123960411 | 3300032076 | Soil | MADPIIAAIQAHRRACAETCAAYERRNAVEDEFVAGVRVPAGEAESDPQWIAADDAAGEALAVQDDLAVKLLETQPTTIA |
Ga0318518_103822461 | 3300032090 | Soil | MNSSDPIIAAIESHRRACAETRAAYQRQIAMEEELGAGTRVPAGDVENDPRWIAANDAAGDALAVQDDLAVKLLVTKPT |
Ga0318540_100292713 | 3300032094 | Soil | MDDPIIAAIEAHRRACAETGAAYERRNAVEDELVAGVRVPADEAESDPQWIAADD |
Ga0307471_1037108251 | 3300032180 | Hardwood Forest Soil | MNTDDPIIAAIEAHRRACAETWAAYERRNAVEDEFVAGVRVPAGEAESDPQWIAADDAAAEALAVQDDLALKLLETQPTTIAGAAA |
Ga0306920_1007192021 | 3300032261 | Soil | MNTDDPIIAAIEAHRRACAETRAAFEHQSAVENELVAGALVSAGEAENDPQWIAANAIAGETLAAQDDLAMK |
Ga0306920_1017764152 | 3300032261 | Soil | MADPIIAAIQAHRRACAETCAAYERRNAVEDEFVAGVRVPAGEAESDPQWIAADDAAGEALAVQDDLAVKLLE |
Ga0306920_1021392562 | 3300032261 | Soil | MNIDDPIIAAIEAHRRACAETRAAFEHQSAVENGLVTGAQVAAGEAEN |
Ga0306920_1042711351 | 3300032261 | Soil | MSTKDPIIAAIEAHRRARDETCAAYERQTAVENKLATGGRVAGGRG |
Ga0310914_115654951 | 3300033289 | Soil | MNTDDPILAAIEAHRRACAETCAAYERRSAVEDELVAGVRVPAGEAENDLRWIAANDAAGEALSVQDDLAVKLLETQPTT |
Ga0318519_101050151 | 3300033290 | Soil | MDDPIIAAIEAHRRACAETCAAYERRNAVEDEIVAGVRVPAGEAESDPQWISADD |
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