NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094628

Metagenome Family F094628

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094628
Family Type Metagenome
Number of Sequences 105
Average Sequence Length 41 residues
Representative Sequence MRTKVNIKIKLNQILRGEIEKKKIQNKIYSNQKFEDQIYYNQ
Number of Associated Samples 23
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.98 %
% of genes near scaffold ends (potentially truncated) 18.10 %
% of genes from short scaffolds (< 2000 bps) 43.81 %
Associated GOLD sequencing projects 23
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (40.952 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(73.333 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(82.857 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF02458Transferase 3.81
PF14223Retrotran_gag_2 2.86
PF00612IQ 1.90
PF00225Kinesin 1.90
PF13456RVT_3 1.90
PF07727RVT_2 1.90
PF00403HMA 0.95
PF07731Cu-oxidase_2 0.95
PF00190Cupin_1 0.95
PF00004AAA 0.95
PF00665rve 0.95
PF13960DUF4218 0.95
PF00326Peptidase_S9 0.95
PF16209PhoLip_ATPase_N 0.95
PF04005Hus1 0.95
PF07224Chlorophyllase 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.95
COG2217Cation-transporting P-type ATPaseInorganic ion transport and metabolism [P] 0.95
COG2608Copper chaperone CopZInorganic ion transport and metabolism [P] 0.95
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.95
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.95
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.95
COG4584TransposaseMobilome: prophages, transposons [X] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms59.05 %
UnclassifiedrootN/A40.95 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300028786|Ga0307517_10003398All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus24784Open in IMG/M
3300028786|Ga0307517_10004730All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae20802Open in IMG/M
3300028786|Ga0307517_10007782All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida15543Open in IMG/M
3300028786|Ga0307517_10031386Not Available6185Open in IMG/M
3300028786|Ga0307517_10061874All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae3532Open in IMG/M
3300028786|Ga0307517_10438288Not Available680Open in IMG/M
3300028794|Ga0307515_10020628All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa11738Open in IMG/M
3300028794|Ga0307515_10023128All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta10911Open in IMG/M
3300028794|Ga0307515_10031781All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus8776Open in IMG/M
3300028794|Ga0307515_10034240All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis8326Open in IMG/M
3300028794|Ga0307515_10049815All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta6287Open in IMG/M
3300028794|Ga0307515_10067567Not Available4927Open in IMG/M
3300028794|Ga0307515_10115635Not Available3088Open in IMG/M
3300028794|Ga0307515_10245017Not Available1555Open in IMG/M
3300028794|Ga0307515_10284328All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis1357Open in IMG/M
3300028794|Ga0307515_10289009Not Available1337Open in IMG/M
3300028794|Ga0307515_10600128All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis711Open in IMG/M
3300030521|Ga0307511_10002768All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida18224Open in IMG/M
3300030521|Ga0307511_10156087All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis1295Open in IMG/M
3300030521|Ga0307511_10161579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa1256Open in IMG/M
3300030521|Ga0307511_10235103All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis901Open in IMG/M
3300030521|Ga0307511_10412979Not Available549Open in IMG/M
3300030522|Ga0307512_10007260All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida11026Open in IMG/M
3300030522|Ga0307512_10040827All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta3866Open in IMG/M
3300030522|Ga0307512_10385909Not Available596Open in IMG/M
3300030522|Ga0307512_10443292Not Available527Open in IMG/M
3300031456|Ga0307513_10014120All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta9774Open in IMG/M
3300031456|Ga0307513_10017366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa8627Open in IMG/M
3300031456|Ga0307513_10070453Not Available3654Open in IMG/M
3300031456|Ga0307513_10234947Not Available1643Open in IMG/M
3300031456|Ga0307513_10504120All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa927Open in IMG/M
3300031456|Ga0307513_10608911All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300031507|Ga0307509_10062199All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis3937Open in IMG/M
3300031507|Ga0307509_10092599All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Rosales → Rosaceae → Amygdaloideae → Amygdaleae → Prunus3088Open in IMG/M
3300031507|Ga0307509_10164575All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis2109Open in IMG/M
3300031507|Ga0307509_10666334Not Available708Open in IMG/M
3300031507|Ga0307509_10776625Not Available623Open in IMG/M
3300031507|Ga0307509_10947475All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis526Open in IMG/M
3300031507|Ga0307509_10965471All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus518Open in IMG/M
3300031616|Ga0307508_10059458Not Available3380Open in IMG/M
3300031616|Ga0307508_10112784Not Available2319Open in IMG/M
3300031616|Ga0307508_10168274All Organisms → cellular organisms → Bacteria1795Open in IMG/M
3300031616|Ga0307508_10424889Not Available920Open in IMG/M
3300031616|Ga0307508_10503138Not Available806Open in IMG/M
3300031616|Ga0307508_10812539Not Available553Open in IMG/M
3300031616|Ga0307508_10838898All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis539Open in IMG/M
3300031649|Ga0307514_10018523All Organisms → cellular organisms → Bacteria5708Open in IMG/M
3300031649|Ga0307514_10175191Not Available1393Open in IMG/M
3300031649|Ga0307514_10337269Not Available814Open in IMG/M
3300031649|Ga0307514_10345288Not Available798Open in IMG/M
3300031649|Ga0307514_10450134Not Available633Open in IMG/M
3300031649|Ga0307514_10482296Not Available597Open in IMG/M
3300031649|Ga0307514_10581617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa508Open in IMG/M
3300031649|Ga0307514_10591806Not Available501Open in IMG/M
3300031730|Ga0307516_10038021All Organisms → cellular organisms → Bacteria4806Open in IMG/M
3300031730|Ga0307516_10050155Not Available4095Open in IMG/M
3300031730|Ga0307516_10216956All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis1624Open in IMG/M
3300031730|Ga0307516_10285094Not Available1332Open in IMG/M
3300031730|Ga0307516_10677188Not Available687Open in IMG/M
3300031838|Ga0307518_10000784All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae23825Open in IMG/M
3300031838|Ga0307518_10048898Not Available3074Open in IMG/M
3300031838|Ga0307518_10213146Not Available1269Open in IMG/M
3300032354|Ga0325403_1004118All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta13466Open in IMG/M
3300032354|Ga0325403_1004621All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa12824Open in IMG/M
3300032354|Ga0325403_1008017All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus10103Open in IMG/M
3300032354|Ga0325403_1016136All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis6936Open in IMG/M
3300032354|Ga0325403_1019468All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta6186Open in IMG/M
3300032354|Ga0325403_1019544All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus tomentosa6170Open in IMG/M
3300032354|Ga0325403_1048760All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa3003Open in IMG/M
3300032354|Ga0325403_1053064Not Available2751Open in IMG/M
3300032354|Ga0325403_1088217All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis1442Open in IMG/M
3300032355|Ga0325401_1004790All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae12821Open in IMG/M
3300032374|Ga0325400_1177349All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta1023Open in IMG/M
3300032389|Ga0325405_1001112All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta27077Open in IMG/M
3300032389|Ga0325405_1014308All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa7403Open in IMG/M
3300032389|Ga0325405_1015851All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa6914Open in IMG/M
3300032389|Ga0325405_1019735Not Available5939Open in IMG/M
3300032389|Ga0325405_1031168Not Available4100Open in IMG/M
3300032389|Ga0325405_1031969All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta4010Open in IMG/M
3300032389|Ga0325405_1042468All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus3030Open in IMG/M
3300032389|Ga0325405_1060068All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta1992Open in IMG/M
3300032735|Ga0325410_1003532All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta17672Open in IMG/M
3300032740|Ga0325411_1000577All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus38593Open in IMG/M
3300032741|Ga0325414_1007361All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa11661Open in IMG/M
3300033160|Ga0325402_1037706All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa3763Open in IMG/M
3300033179|Ga0307507_10005126All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida21982Open in IMG/M
3300033179|Ga0307507_10032581All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus trichocarpa5436Open in IMG/M
3300033179|Ga0307507_10149681Not Available1760Open in IMG/M
3300033179|Ga0307507_10187844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa1460Open in IMG/M
3300033179|Ga0307507_10216390Not Available1296Open in IMG/M
3300033179|Ga0307507_10289445Not Available1015Open in IMG/M
3300033179|Ga0307507_10291287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Weissella → Weissella confusa1010Open in IMG/M
3300033180|Ga0307510_10049153All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Malpighiales → Salicaceae → Saliceae → Populus → Populus alba4490Open in IMG/M
3300033180|Ga0307510_10060479All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Rheinheimera → Rheinheimera tangshanensis3897Open in IMG/M
3300033180|Ga0307510_10159280Not Available1858Open in IMG/M
3300033180|Ga0307510_10224858Not Available1384Open in IMG/M
3300033180|Ga0307510_10587881Not Available563Open in IMG/M
3300034389|Ga0325419_006522Not Available12744Open in IMG/M
3300034389|Ga0325419_012292All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta8678Open in IMG/M
3300034389|Ga0325419_032419All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta4010Open in IMG/M
3300034778|Ga0325423_005900All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta12790Open in IMG/M
3300034899|Ga0325407_110926Not Available784Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza73.33%
XylemHost-Associated → Plants → Wood → Unclassified → Unclassified → Xylem21.90%
LeafHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Leaf4.76%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030522Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EMHost-AssociatedOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031649Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EMHost-AssociatedOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031838Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EMHost-AssociatedOpen in IMG/M
3300032354Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R4Host-AssociatedOpen in IMG/M
3300032355Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R2Host-AssociatedOpen in IMG/M
3300032374Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R1Host-AssociatedOpen in IMG/M
3300032389Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R2Host-AssociatedOpen in IMG/M
3300032735Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdIQD-R3Host-AssociatedOpen in IMG/M
3300032740Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdIQD-R4Host-AssociatedOpen in IMG/M
3300032741Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdKOR-R3Host-AssociatedOpen in IMG/M
3300033160Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-PdKOR-R3Host-AssociatedOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M
3300034389Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-Control-R4Host-AssociatedOpen in IMG/M
3300034778Populus deltoides microbial communities from Bellville, Georgia, United States - Leaf-PdIQD-R4Host-AssociatedOpen in IMG/M
3300034899Populus deltoides microbial communities from Bellville, Georgia, United States - Xylem-Control-R4Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0307517_1000339833300028786EctomycorrhizaMTKVNIKIKLNQILRSAIEKKKIQNKIYSNQKFEDQICYN
Ga0307517_1000473023300028786EctomycorrhizaMKMRTKVNIKIKLNQILRDEIKKKDSNKIYINQKFEDKYI
Ga0307517_1000778253300028786EctomycorrhizaMTKVNIKIKLNQILRDEIEKKNSNKIYSNQKFEDQI
Ga0307517_1003138613300028786EctomycorrhizaMRTKINIKIKLNQILRDKIEKQIQNKIYSNQKFEDQI
Ga0307517_1006187433300028786EctomycorrhizaMMTKVNIKIKLNQILRGEFEKKTQNKIYKNQKFEDQICYNQ
Ga0307517_1043828813300028786EctomycorrhizaMRTKVNINIKLNQILRGEIKKKKIQNKIYSNQKFDDQICCNQQII
Ga0307515_10011967113300028794EctomycorrhizaMTIKRIMIKFDIKIKLNQIINNKIKKVQNKKNSNQKIKD
Ga0307515_1002062843300028794EctomycorrhizaMIKVNIKIKLNQILRSAIEKKKIQNKIYSNQKFEDQICYN
Ga0307515_10023128143300028794EctomycorrhizaMRTKVNIKIKLNQILRDEIKKKDSNKIYINQKFEDKYI
Ga0307515_1003178143300028794EctomycorrhizaMRTKVNIKIKLNQILRDEIKKKFKQNIYINQKFEDQI
Ga0307515_1003424053300028794EctomycorrhizaMGTKVNIKIKLNQIMRGEIEKKIQNKIYSNQKFEDRICYNQQII
Ga0307515_1004981593300028794EctomycorrhizaMITKVNIKIKLNQILRDEIEKKKIQNKLYSNKKFEDQI
Ga0307515_1006756713300028794EctomycorrhizaMKVNIKIKLNQILRDEIEKKKSNKIYINQKFDDQIXYNQLIIXYF
Ga0307515_1011563513300028794EctomycorrhizaMSTKVNIKIKLNHILRGEIEKKKIQNKIYSNQKFEDQICYNQHII
Ga0307515_1024501713300028794EctomycorrhizaMRTKFNIKIKSNQILKDEIKKNSNKIYINQKFKDQI
Ga0307515_1028432813300028794EctomycorrhizaMTKVNIKIKLNQILRGEFEKKTQNKIYKNQKFEDQICYNQ
Ga0307515_1028900913300028794EctomycorrhizaMRTKVNIKIKLNQILRDKIEKKKIQNKIYSNQKFEDQI
Ga0307515_1060012823300028794EctomycorrhizaMGIKVNIKIKLNQILRGEIEKKIEKQIYSNQKFEDRICYNQQII
Ga0307511_1000276843300030521EctomycorrhizaMRTKIDIKIKINQILKGKIKKKIQNKIYSNKKFEDQI
Ga0307511_1015608723300030521EctomycorrhizaMGTKVNIKIKLNQIMRGEIEKKIQNKIYSNQKFEDQICYNQQII
Ga0307511_1016157923300030521EctomycorrhizaMRIKVNIKIKLNQILRGEIEKKIQNKIYSNQKFEDRICYNQQII
Ga0307511_1023510313300030521EctomycorrhizaMKTKINIKIKLNQILSGEIEKKRIQNEIYSNQKFDDQICYNQQII
Ga0307511_1041297913300030521EctomycorrhizaMNTKVSIKIKLNHILRGEIEKKKIQNKIYSNQKFKDQIFYNQHII
Ga0307512_1000726033300030522EctomycorrhizaMRTKIDIKIKLNQVRNDEIEKKKIQNKIYINQKTDDEI
Ga0307512_1004082723300030522EctomycorrhizaTKIDIKIKLSQISRGEIEKKIYSNKKFKDQIXYNQQIT
Ga0307512_1038590913300030522EctomycorrhizaMRIKINIKIKLNQILRDEILKKNSNKIYINQKFEDQI
Ga0307512_1044329213300030522EctomycorrhizaMRTKVNIKIKSNQILKDKIGKKKIQNKIYSNQKFENQI
Ga0307513_1001412013300031456EctomycorrhizaMRTKVNIKIKSKSKGXNXKKKIQNKIYSNQKVEDQICYNQQIIXYF
Ga0307513_1001736653300031456EctomycorrhizaMNTKVSIKIKLNHILRGEIEKKKIQNKIYSNQKFKDQICYNQHIIXYF
Ga0307513_1007045313300031456EctomycorrhizaMRTKIDIKIKLNQVRKDEIEKKKIQNKIYINQKIDDEI
Ga0307513_1023494733300031456EctomycorrhizaMKIKTKVNIKIILNQIIRDKIKKKMQNKIYSNQKFDDQI
Ga0307513_1050412013300031456EctomycorrhizaMKIKVNIKIKLNQILRDEIKKKDSNKIYINQKFED
Ga0307513_1060891123300031456EctomycorrhizaMRTKVDLKIKLNQILRDEIEKKIQNKIYSNQKFEYQI
Ga0307509_1006219913300031507EctomycorrhizaMKIKTKVNIKIKLNQIIRDKIKKKMQNKIYSNQKFDDQI
Ga0307509_1009259913300031507EctomycorrhizaMKTKIHIKIKLNQIPRNKIKKNQNKIYSNQKIENQIXYNQQIIKYIFLFFLCQ
Ga0307509_1016457513300031507EctomycorrhizaIKIKLNQIMRSEIEKKIQNKIYSNQKFEDQICYNQQII
Ga0307509_1066633413300031507EctomycorrhizaKQITIIKIRTKVNIKIKLNQILRSEIKKKIQNKIYSNQKFEDQICYNQQII
Ga0307509_1077662513300031507EctomycorrhizaMRTKVNIKIKLNQILRGEIEKKKIQNKIYSNQKFEDQIYYNQ
Ga0307509_1094747523300031507EctomycorrhizaKMGTKVNIKIKLNQIMRGEIEKKIQNKIYSNQKFEDRICYNQQII
Ga0307509_1096547113300031507EctomycorrhizaIKIRTKVNIKIKLNQILRDEFEKKNSNKIYSNQKFEDQI
Ga0307508_1005945843300031616EctomycorrhizaMNTKVSIKIKLNHILRGEIEKKKIQNKIYSNQKFKDQIFYNQHIIXYF
Ga0307508_1011278413300031616EctomycorrhizaMRTKINIKIKLNQVXRDEIEKKKIQNKIYSNQKIDDEIXYNQQITRYFXIFHNF
Ga0307508_1016827423300031616EctomycorrhizaMIKVNIKIKLNQILSDKIEKKNQNKIYSNQKFEDKIYYNMQIIRYF
Ga0307508_1042488913300031616EctomycorrhizaMTKVNIKIKLNQILSDKIEKKNQNKIYSNQKFEDK
Ga0307508_1050313813300031616EctomycorrhizaITKFNIKIKLNQNLRGEVEKKKIQNKIYSNQKLEYQICYNQQII
Ga0307508_1081253913300031616EctomycorrhizaMKIKVNIKIKINQILRSEIEKKNQNKIYSNQKFEDQICYNQQII
Ga0307508_1083889813300031616EctomycorrhizaIKMRTKVNINIKLNQILRGEIKKKKIQNKIYSNQKFNDQICYNQQII
Ga0307514_1001852313300031649EctomycorrhizaMKIMTKVNIKIKLNQILRDEIEKKNSNKIYSNQKFEDQIXHN
Ga0307514_1017519113300031649EctomycorrhizaMRTKVNIKIKLNQILRGEIEKKKIQNKIYSNQKFENQVCYN
Ga0307514_1033726913300031649EctomycorrhizaCIKTDIKIKLNQILRDKIKKKIQNKIYINQKIKDQF
Ga0307514_1034528813300031649EctomycorrhizaMKVNIKIKLNQILRDEIEKKNSNKIYINQKFDDQI
Ga0307514_1045013413300031649EctomycorrhizaKMRTKFNIKIKSNQILKDEIKKNSNKIYINQKFKDQI
Ga0307514_1048229613300031649EctomycorrhizaRIKVDIKIKLNKILRDEIEKKKIQNKIYSNQKFNDQI
Ga0307514_1058161713300031649EctomycorrhizaKLNQILRGEIEKKKIQNKIYSNQKFENQVCYNQQII
Ga0307514_1059180613300031649EctomycorrhizaKQITIIKMRIKVNIKIKLNQILRGEIEKKKIQNKIYSNKKFKDQICYNQQII
Ga0307516_1003802143300031730EctomycorrhizaMGTKVNIKIKLNQIMRGEIEKQIQNKIYSNQKFEDRICYNQQII
Ga0307516_1005015513300031730EctomycorrhizaMRTKVNIKIKLNQILRDKIEKKNQNKIYSNQKFEDQI
Ga0307516_1021695633300031730EctomycorrhizaMIKVNIKIKLNQILMGEFEKKIQNKIYKNQKFEDQICYNQ
Ga0307516_1026801513300031730EctomycorrhizaMTKVNIKIKLNQIIRGAIKKKVQNKIYSNQKFKDQIYYN
Ga0307516_1028509413300031730EctomycorrhizaMRTKVNLKIKLNQNLRGEVEKKKIQNKLYSNQKLEDQICYNQQII
Ga0307516_1067718813300031730EctomycorrhizaMNTKVSIKIKLNHILRGEIEKKKIQNKIYSNQKFKDQICYNQHII
Ga0307518_10000784103300031838EctomycorrhizaMTKVNIKIKLNKILRGAIEKKKIQNKICNNQKFQNQICYN
Ga0307518_1004889813300031838EctomycorrhizaMSTKVNIKIKLNHILRGEIEKKKIRNKIYSNQKFEDQICYNQHIIXYL
Ga0307518_1021314613300031838EctomycorrhizaMRTKVNIKIKLNQILRDKIEKKIQNKIYSNQKFEDQI
Ga0325403_100411883300032354XylemMKTKINIKIKLNQILRGEIEEKKRIQNKIYSNQKFEDQICYNQQIIXYF
Ga0325403_100462123300032354XylemMRTKVNIKIKLNEILRGEIEKKNIQNKIYSNQKFEN
Ga0325403_100801763300032354XylemMIKVNIKIKLNQILRDEIEKKKYSNKIYSNQKFEDQI
Ga0325403_101613633300032354XylemMNTKVNIKTKLNQILKGKIEKKKIQNKIYSNKKFDGQICYNQ
Ga0325403_101946823300032354XylemMRIKINIKIKLNQILRGEIENKKIQNKIYSNQKFEDQICYNQQII
Ga0325403_101954423300032354XylemMTKVNIKIKLNQILRGAIEKKKIQNKIYSNQKFEDQICYN
Ga0325403_104876013300032354XylemMRIKVDMKINLNQILWDEIEKKKIQSKIYRNQKFGDQI
Ga0325403_105306413300032354XylemMIKIDIKIKLNQILRDKIKKNQNKIYTNQKLGDKI
Ga0325403_108821713300032354XylemMKTKVDIKIKLNQILRDKIEKKKFQNKIYSNQKFENQI
Ga0325401_100479073300032355XylemMRTKVNIKIKLNEILRGEIEKKNIQNKIYSNQKFED
Ga0325400_117734923300032374XylemRTKVNIKIKLNQILRGEIEEKKKIQNKIYSNRKFEDEICYNQQII
Ga0325405_100111223300032389XylemMRIKVDMKINLNQILWDEIEKKKIQSKIYRNQKFGDQILYNQQIT
Ga0325405_101430813300032389XylemMTKIDIKIKLNQILSNEIKKNQNKIYSNQKFEDQI
Ga0325405_1015851103300032389XylemKINIKIKLNQILKSKIKKKIQNKIYSNKKFKDQICYNQQIL
Ga0325405_101973543300032389XylemMRIKVNIKIKLNQILKSEIEQKKIQNKIYSNQKIEDQIFYNQQII
Ga0325405_103116853300032389XylemMRTKVNIKIKLNQNLRDEIKKKDSNKIYINQKFEDQIXYNQQIIXYF
Ga0325405_103196933300032389XylemMKVKIDIKIKLNQILRDEIEEKKIXNNIDSNQKFENQIXYS
Ga0325405_104246813300032389XylemMKTKINIKIKLNQILRGEIENKIYSNQKFEDQICYN
Ga0325405_106006833300032389XylemMKTKINIKIKLNQILRGEIEEKKRIHNKIYSNQKFEDQICYNQQII
Ga0325410_100353283300032735XylemMKTKINIKIKLNQILRGEIEEKKRIHNKIYSNQKFEDQICYNQQIIXYF
Ga0325411_1000577213300032740XylemMIKVNIKIKLNQILRDEIEKKKYSNKIYSNQKFEDQIXNNQQTISYF
Ga0325414_100736163300032741LeafMKVKIDIKIKLNQILRDEIKEKKIXNNIDSNQKFENQIXYS
Ga0325402_103770623300033160XylemMRIKVDMKINLNQILWDEIEKKKIQSKIYKNQKFGDQI
Ga0307507_1000512643300033179EctomycorrhizaMAKVNIKIKLNQILRDEIEKKNSNKIYSNQKFEDQT
Ga0307507_1003258113300033179EctomycorrhizaMGTKVNIKIKLNQILRGEIEKKIQNKIYSNQNFEDRICYNQ
Ga0307507_1014968123300033179EctomycorrhizaMSTKVSIKIKLNHILRGEIEKKKIQNKIYSNQKFKDQICYNQHIIXYF
Ga0307507_1018784413300033179EctomycorrhizaMGTKVNIKIKLNQIMRSEIEKKIQNKIYSNQKFEDQICYNQQII
Ga0307507_1021639013300033179EctomycorrhizaMIKVNIKIKLNQILSDKIEKKIQNKIYSNQKFEDKICYNMQIIRYF
Ga0307507_1028944513300033179EctomycorrhizaKVDIKIKLNQILRDRIKKKIQNKIYSNQKFECQIXYN
Ga0307507_1029128713300033179EctomycorrhizaIKIWIKVNIKIKLNQILRDEIKKQSNKIYINQNFED
Ga0307507_1067863713300033179EctomycorrhizaKIDIKIKLNQILRDEIEKKKIQNKIYSNKKFDDQI
Ga0307510_1004915333300033180EctomycorrhizaMMIKVNIKIKLNQILSDKIEKKIQNKIYSNQKFEDKICYNMQIIRYF
Ga0307510_1006047923300033180EctomycorrhizaMEIKVNIKIKLNQILRGEIEKKIEKQIYSNQKFEDRICYNQQII
Ga0307510_1015928023300033180EctomycorrhizaMRTQIDIKIKLNQILSDEIKKKNQNKIYSNQKFEDQI
Ga0307510_1022485813300033180EctomycorrhizaMRTKVNIKIKLNQILRDKIENKIQNKIYSNQKFEDQI
Ga0307510_1058788113300033180EctomycorrhizaINIKIKLNQILRDGIEKKKKIQNKIYSNQKFEDQI
Ga0325419_006522_5921_60343300034389LeafMKTKINIKIQLNQIISDKIKKKMPNKIYNNQKFEDQI
Ga0325419_012292_379_4923300034389LeafMRTKVNIKIKLNQNLRDEIKKKDSNKIYINQKFEDQI
Ga0325419_032419_2429_25543300034389LeafMKVKIDIKIKLNQILRDEIEEKKIWNNIDSNQKFENQIWYS
Ga0325423_005900_6100_62403300034778LeafMKTKINIKIKLNQILRGEIEEKKRIQNKIYSNQKFEDQICYNQQII
Ga0325407_110926_141_2693300034899XylemMKIKLYQILRDEIKKKKDSNKIYSNQKFEDQIWYNQQIIWYF


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