Metagenome Family F094603

Overview

Basic Information

• Family ID: F094603
• Family Type: Metagenome
• Number of Sequences: 106
• Average Sequence Length: 51 residues
• Representative Sequence: MKANKALKRLAKIEALMSDVTERYSSAPHIREVLQDAKAAVTRAKEA
• Number of Associated Samples: 95
• Number of Associated Scaffolds: 106

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 0.00 %
• % of genes from short scaffolds (< 2000 bps): 0.00 %
• Associated GOLD sequencing projects: 90
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (100.000 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (12.264 % of family members)
• Environment Ontology (ENVO): Unclassified (34.906 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (33.962 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 54.67%
  β-sheet: 0.00%
  Coil/Unstructured: 45.33%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF04203	Sortase	14.15
PF01910	Thiamine_BP	4.72
PF01804	Penicil_amidase	3.77
PF00092	VWA	2.83
PF08238	Sel1	1.89
PF11154	DUF2934	1.89
PF07929	PRiA4_ORF3	1.89
PF02581	TMP-TENI	0.94
PF00561	Abhydrolase_1	0.94
PF13495	Phage_int_SAM_4	0.94
PF03949	Malic_M	0.94
PF01545	Cation_efflux	0.94
PF03109	ABC1	0.94
PF02899	Phage_int_SAM_1	0.94
PF04366	Ysc84	0.94
PF00589	Phage_integrase	0.94
PF00665	rve	0.94
PF13701	DDE_Tnp_1_4	0.94
PF05977	MFS_3	0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	14.15
COG0011	Thiamin-binding stress-response protein YqgV, UPF0045 family	Coenzyme transport and metabolism [H]	4.72
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.77
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.94
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.94
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.94
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.94
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.94
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.94
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.94
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.94
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.94
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.94
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.94
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.94
COG0352	Thiamine monophosphate synthase	Coenzyme transport and metabolism [H]	0.94
COG0281	Malic enzyme	Energy production and conversion [C]	0.94
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.94

Phylogeny

NCBI Taxonomy

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.42%
Host-Associated	Host-Associated	23.58%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.49%
Plants	Host-Associated → Plants	23.58%
Aquatic	Environmental → Aquatic	17.92%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.72%
Freshwater	Environmental → Aquatic → Freshwater	16.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.60%
Peat	Environmental → Terrestrial → Peat	3.77%
Sediment	Environmental → Aquatic → Sediment	1.89%
Roots	Host-Associated → Plants → Roots	1.89%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.15%
Loam	Environmental → Terrestrial → Soil → Loam	8.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.89%

Subtype

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.94%

Habitat

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.26%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	9.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.77%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.94%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.94%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental
3300025619	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)	Environmental
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental
3300030002	II_Fen_N1 coassembly	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B_all_v_01629360	2140918024	Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAK
JGI12270J11330_101249553	3300000567	Peatlands Soil	VKANKALKRLAKIEALISDVAERYSSGGFHVREALKDAKAALARLKEA
JGI24129J20441_10601141	3300001870	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLRTSSGTAKN
C688J35102_1201333781	3300002568	Soil	MKSKKVLKRIAKIEALISKVTERSSQSAPHVRELLRDAKAAVIRAKEAVQASSV
Ga0062593_1030577252	3300004114	Soil	VKAKKVLRRLAKIDALISEVTDRCSKSAVQIQQSLQGAKAAFGRVKKAVN
Ga0070666_109971201	3300005335	Switchgrass Rhizosphere	MKAKKVLKRISKIEALMSKVTQGSSPQIRELLRDAKAAVIRTREAVQASSETAANPPS
Ga0070666_110884721	3300005335	Switchgrass Rhizosphere	MKAKKVLKRLANIEALISKVTERSSASTPHIRQLLQDAKAAVIRAKEA
Ga0070709_112783582	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIEALMSGVTKRYSANAPNLRRVLQDALDAVARAKGAVSLQASSGTKAGTAKAHQAVKKAT
Ga0070708_1006472401	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQ
Ga0070707_1011062461	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKAKKALKRLAKIEALMSDVTERYSAGAPHIREALRDAKAAVTRAKDALGVQASSK
Ga0070698_1015782072	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQT
Ga0070684_1002429811	3300005535	Corn Rhizosphere	MKANKALKRLTKIEALMSKVRDQFSANAPTLENVFQQATAAIARAKEAVGLQVSSKAKAR
Ga0070732_108220281	3300005542	Surface Soil	MKANKALKRLAKIEALLSDVMGRYSANPPEVREAFQDAKTAVARAKNAVSSQASS
Ga0070664_1020278211	3300005564	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAM
Ga0068852_1019100011	3300005616	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQ
Ga0068852_1022504422	3300005616	Corn Rhizosphere	MKANKALKRMAKIESLTSDMMRRLAKGAPHLSEVLQDLKG
Ga0068859_1026518772	3300005617	Switchgrass Rhizosphere	MKANKALKRLAKIEALMSDVTERYSARGPDTRKLLQDAEAAVVRAK
Ga0070764_109754661	3300005712	Soil	MKSNKALKRLTHVEELLADVTERYSADASHVREALQAAKLAVTRAKD
Ga0068860_1007216143	3300005843	Switchgrass Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEA
Ga0080027_102426011	3300005993	Prmafrost Soil	MKANKALKRLAKIEALVSDVTERYLASAPHIQEALHDAKAAVTRAKEAVSLHASS
Ga0075017_1013573242	3300006059	Watersheds	MKVRKALKRLAKIEALLSDVTERYSSSALPLREALRDAKAALARVKEAVSSQASLGKAK
Ga0075030_1015336361	3300006162	Watersheds	MKANKVLKRLAKIEALVSDVAQKFSAGAPQVSGVLK
Ga0068871_1007090882	3300006358	Miscanthus Rhizosphere	MKANKALKRLAKIEALMSDVTERYSARGPDTRKLLQDAEAAVVRAKAAVNLEA
Ga0075434_1011599233	3300006871	Populus Rhizosphere	MKAKKVLKRIAKIEALILEVSERSSPSAPQIQELLREAKNAISRA
Ga0066793_104843412	3300009029	Prmafrost Soil	MVMKANKALKRLAKIEALMSDVTERYSASAPDLRKVLQDAKAAVARAKEAVGLQGSSGKK
Ga0099829_116218661	3300009038	Vadose Zone Soil	MKAKKALKRLTKIESLMSDVTKRYSASAPHVRGALQDAQ
Ga0105240_115848662	3300009093	Corn Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAA
Ga0099792_102649241	3300009143	Vadose Zone Soil	MKANKALKRLAKIEVLMSDVAKRFSAHAPSLREAFADLKTAVDRVKEAVGVQVTSAAGKKKAA
Ga0105243_102054003	3300009148	Miscanthus Rhizosphere	MKANKALKRLAKIEALMSDVADRFSASAPHLREALKDLKAAVASVKE
Ga0105241_125079651	3300009174	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVREAVKVQASPAAKKAAPKKAARTGKK
Ga0116221_14428961	3300009523	Peatlands Soil	VVVKANKALKRLAKIEALISDVAERYSSGGFHVREAL
Ga0105238_100599851	3300009551	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSA
Ga0105238_121499071	3300009551	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSA
Ga0116127_10211864	3300009618	Peatland	MKAKKALKRLAKIEALISDVTERYSSAPHMREVLQ
Ga0116121_13100551	3300009644	Peatland	MKANKALKRLAKIEALISDLMERYSASAPHIREVLQDAKAAVTRAKEAVSLQASSG
Ga0105856_13267052	3300009662	Permafrost Soil	MKANKALKRLARIEASLTAVTKRYSAGTPHIREALDDAQAA
Ga0116224_104881472	3300009683	Peatlands Soil	MIMKANKALKRLAKIEESVSEVMERYSATAPHIREALQDAKAAVTRAKEVVSLQASSGTTNAPKKA
Ga0116217_105434051	3300009700	Peatlands Soil	MKANKALKRLAKIEALMSGVTERYSASAPHLRKLLQEAEEAFAR
Ga0134128_116033021	3300010373	Terrestrial Soil	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVTEAVKVQTSSSAAPKKASSKKTSSKKA
Ga0137392_114878171	3300011269	Vadose Zone Soil	MKVNKALKRLAKIEALMLGVTERYLPSAPHIREVLQNAKAA
Ga0137389_104540103	3300012096	Vadose Zone Soil	MKANKALKRLAKIEALISDVTERYSASAPHVRDVLQDAKAAVARAKEAVRLRASAGKPK
Ga0137376_101418721	3300012208	Vadose Zone Soil	MKPNKVLKRLAKIEALVSDLAKRFRPSAPRVREVLQDAKGAVIRAKETVL
Ga0137369_105730981	3300012355	Vadose Zone Soil	MRANKAQKRLTKIEALMSGVAERYSPGAPDIREVLQ
Ga0181518_100863704	3300014156	Bog	MKANKALKRLAKIEALISDVAERYSSSALHIREALRDAKAAFARVKEAVSSQASSETAK
Ga0181526_100524205	3300014200	Bog	MVMKANKALKRLAKIEESVSDVMERYSASAPHIREALQDAKAAVTRAKEAVSSQASSGTTNAPQKAATKK
Ga0163163_100882341	3300014325	Switchgrass Rhizosphere	MKANKALKRLAKIEALMSDVADRFSASAPHLREALKDLKAAVASVKEAVKVQAS
Ga0182014_103727353	3300014491	Bog	MKTNKALKRLAKIEASISNMTERYSSAPHIRETLQDAKA
Ga0182011_103251171	3300014496	Fen	MKANKAVKRLAKIEALMSDVMERYSAGAPDIREMLQDAKA
Ga0182024_102510601	3300014501	Permafrost	MKANKAVKRLAKIEASMSDVIERYSASTPHLREVLQDAKAAVTRAKEAVSLQASSGT
Ga0182021_132450882	3300014502	Fen	MKAIKALKRLTKAEALLSNVIERYVASGHSIQEVLQDAKASVIRAKDAVGLQASPRKSKKPSVKAGR
Ga0182030_100821145	3300014838	Bog	MKANKALKRLTKIEELIADVTERYSTSALHIRAALVGAKLAVARLKA*
Ga0182027_102962071	3300014839	Fen	MKANKALKRLAKIEALMSDVTERYSASAPDIREMLQDAKAAVTRAKEAVS
Ga0187856_10507251	3300017925	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRA
Ga0187856_10651793	3300017925	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRA
Ga0187849_12796142	3300017929	Peatland	MKANKALKRLAKVEALMSDVTERYSASAPHIREVLQDAKAAVTRAKEA
Ga0187891_10151248	3300017996	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHA
Ga0187891_10352653	3300017996	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHA
Ga0187868_10248493	3300018002	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAK
Ga0187868_11520783	3300018002	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAVTRAK
Ga0187884_1000724810	3300018009	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQHAKAAV
Ga0187860_12583762	3300018014	Peatland	MKATKALKRLAKIEALISDVMERYSSSALHIREALQDAKAAFVRVKEAVSSQASSGTAKKKA
Ga0187866_12323391	3300018015	Peatland	MKANKALKRLAKIEALMSDVTERYSASAPDVQEALQDAKAAVTRAKEAVSLQA
Ga0187889_101320111	3300018023	Peatland	MKAKKALKRLAKIEALISDVTERYSSAPHMREVLQDAKAAVTRAKEA
Ga0187885_102906863	3300018025	Peatland	MKAKKALKRLAKIEALMSDVAERYSESVPHIREVLQDA
Ga0187890_100458025	3300018044	Peatland	MKANKALKRLAKIEALMSDVAERYSESVPHIRELLQHAKAGITRAKEAVGLQASSETA
Ga0210406_104985631	3300021168	Soil	MKAKKVLKRIAKIEALISEVTERSSLSAPHIQELLREAKTAIARAKKAVSSQ
Ga0208716_11162151	3300025548	Arctic Peat Soil	MKTDKALKRLAKIEVLISDMTERYSSALHIRETLQD
Ga0207926_11319231	3300025619	Arctic Peat Soil	MKANRVLKRLAKIEALILKVTERSSASAPHIRELLQDAKAAVTRAKEAVSLQASS
Ga0209538_11693861	3300025846	Arctic Peat Soil	MKTNKALKRLAKIEASISDMTERYSSALHIRETLQDAKAAVTRAKEAVSLQ
Ga0209176_100831002	3300025854	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAK
Ga0209429_102098282	3300025864	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLQA
Ga0209226_102222571	3300025865	Arctic Peat Soil	MKANKALKRLAKIEMLMSDVTERYSASAPHIREVLQDAKAAVTRAKEAVSLQASSGTAKNPPMK
Ga0209226_102724961	3300025865	Arctic Peat Soil	MKTNKALKRLAKIEASISDMTERYSSALHIRETLQDAKAAVTRAKEAVSLQKS
Ga0209585_100256761	3300025891	Arctic Peat Soil	MVMKANKALKRLAKIEALMSDVTERYSASAPHVQE
Ga0209585_100883823	3300025891	Arctic Peat Soil	MKANKALKRLAKIEALMSDVVERYSASAPHVRELLQDAKAAVTRAKEAVSLRSSSGTAKN
Ga0207710_102812842	3300025900	Switchgrass Rhizosphere	MKTKKILKRIVKIEALMSEVTERSSASAPHIRELLRDAKAAVIRAKKAVQA
Ga0207657_101716923	3300025919	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVL
Ga0207694_111932861	3300025924	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQASPAAKKAEPKKAARAGKKAVAKKRAPL
Ga0207700_102640454	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKANKALKRLTKIEALMSRVRDQYSASAPKLESVLQQATAAIARAKEAVTLEVSSRTK
Ga0207664_112559921	3300025929	Agricultural Soil	MKAKRVLKRIAKIEALISKVTERSSGGAPNIRELLRDAKTAVIRAKEALRASFGKA
Ga0207709_106419322	3300025935	Miscanthus Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEAAKVQASPAAKKAAPKK
Ga0207679_120691981	3300025945	Corn Rhizosphere	MKANKALKRMAKIESLMSDVAERFSASAPHLREALKDLKAAMLSVKEAVKVQASPAAKK
Ga0207639_104246121	3300026041	Corn Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSAAAPKKASSKKTSSKKA
Ga0207676_118252481	3300026095	Switchgrass Rhizosphere	MKTKKILKRIVKIEALMSEVTERSSASAPHIRELLRDAKAAVIRAKKAVQAS
Ga0209848_10036824	3300026221	Permafrost Soil	MKANKALKRLAKIEALVSDVTERYLASAPHIQEALHDAKAAVTRAKEA
Ga0209908_100437602	3300027745	Thawing Permafrost	MKANKAVKRLAKIEASMSDVIERYSASTPHLREVLQDAKAAVTRAKEAVSLQASSGTAENPPV
Ga0209415_109922412	3300027905	Peatlands Soil	MKANKALKRLAKIEESVSEVMERYSATAPHIREALQDAKAAVTRAKE
Ga0209168_106395032	3300027986	Surface Soil	MKANKALKRLAKIEALMSDVMERYSASTPNVRDVLQDAKAAVARAKEALSLQASSGTSKKSAPIKKG
Ga0268264_106231771	3300028381	Switchgrass Rhizosphere	MKANKALKRLGKIESIMSDVAERFSASAPHLREALKDLKAAMLSVKEAARV
Ga0246001_10265651	3300029889	Peat	MKANKALKRLAKIEALMSDVTERYSASAPDVQEALQDAKAAVTRAKEAVSLQASSGTATNPPAKHSK
Ga0311350_117593822	3300030002	Fen	MKANKALRRLAKIEELISDVTERYSTSASQIRNVLQDAKAAVVRAKEAVQAASGMAKQFP
Ga0170823_114526963	3300031128	Forest Soil	MKANKALKRLAKIEALISDVTERYSASAPHVRDVL
Ga0170824_1028494062	3300031231	Forest Soil	MKKNKALKRLAKIEAMMSDVAKRFSAHAPTLRDAFADLKTAVGRVKEAVGVQAASAAAKKKAASG
Ga0170824_1098954781	3300031231	Forest Soil	MKANKALKRLAKVEALVRDATERYSARVPHIREMLNDAKAAVTRAKEAIGLH
Ga0170824_1152932491	3300031231	Forest Soil	MKANKVLKRIAKIEALMSKVMERSSASEPHIRELLRDAKAAITRAKKAVSLQAFSETAKK
Ga0265316_106660461	3300031344	Rhizosphere	MKTKKALKRLARIVELMSDVAERYSVAPEIRETLQDAKAAV
Ga0170820_176068902	3300031446	Forest Soil	MKKNKALKRLAKIEAMMSDVAKRFSAHAPTLRDAFADLKTAVGRVKEAVGVQAASAAAKK
Ga0265313_102343121	3300031595	Rhizosphere	MKANKALKRLAKIETLMSDVAERFSASAPHLREALKDLKAAVLSVKEAVKVQTSSSTASAKK
Ga0307469_120469032	3300031720	Hardwood Forest Soil	MKANKALKRLAKIEASMSDVAARYSASEPHTQEVLQE
Ga0311301_112353661	3300032160	Peatlands Soil	MKANKALKRLAKIEALISDVTERYSKGARQIREALQDAKAAFARVKAAVSSQASSRTAKS
Ga0335078_122336592	3300032805	Soil	MKTNKALKRIAKIEALISDVTERYSSSAFHIREALQEAKAAFARVKDAVSSQ
Ga0335081_108180901	3300032892	Soil	MKANKALKRLAKIEELMSDVVERYSGSAPHIRALLQDAKAAVIR
Ga0326727_106871683	3300033405	Peat Soil	MKANKAVKRLAKIEASMSDVMERYSAGAPDVREALQNAKAAVTRAK
Ga0316624_105503871	3300033486	Soil	MKAKKALKRLAKIEALISDVTERVSKGSLQIQEALQDAKAAFGRVKEAVS
Ga0316624_120573402	3300033486	Soil	MKANKALKRLNKIEALISRLTERVSAGSPHIREMLGDVKAAVIR
Ga0371488_0177278_953_1093	3300033983	Peat Soil	MKANKALKRLAKIEALMSDVTERYSSAPHIREVLQDAKAAVTRAKEA