Metagenome / Metatranscriptome Family F094602

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094602
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	61 residues
Representative Sequence	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR
Number of Associated Samples	64
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	33.96 %
% of genes near scaffold ends (potentially truncated)	25.47 %
% of genes from short scaffolds (< 2000 bps)	72.64 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.208 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (24.528 % of family members)
Environment Ontology (ENVO)	Unclassified (38.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.660 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.92% β-sheet: 0.00% Coil/Unstructured: 39.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00909	Ammonium_transp	54.72
PF07642	BBP2	11.32
PF13672	PP2C_2	2.83
PF13520	AA_permease_2	2.83
PF03951	Gln-synt_N	1.89
PF00069	Pkinase	1.89
PF00291	PALP	0.94
PF00324	AA_permease	0.94
PF13231	PMT_2	0.94
PF02769	AIRS_C	0.94
PF13493	DUF4118	0.94
PF03781	FGE-sulfatase	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	54.72
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.55
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	1.89
COG0531	Serine transporter YbeC, amino acid:H+ symporter family	Amino acid transport and metabolism [E]	0.94
COG0833	Amino acid permease	Amino acid transport and metabolism [E]	0.94
COG1113	L-asparagine transporter or related permease	Amino acid transport and metabolism [E]	0.94
COG1115	Na+/alanine symporter	Amino acid transport and metabolism [E]	0.94
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
All Organisms	root	All Organisms	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
cellular organisms	root	All Organisms → cellular organisms	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.49 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.77 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.83 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.89 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	2.83 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.89 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.77 %
Granulicella rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	2.83 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.89 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918024\|NODE_195901_length_1921_cov_8.396668	Not Available	1971	Open in IMG/M
3300003218\|JGI26339J46600_10077665	Not Available	841	Open in IMG/M
3300004635\|Ga0062388_100137316	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300005176\|Ga0066679_10856573	Not Available	576	Open in IMG/M
3300005949\|Ga0066791_10017120	Not Available	1487	Open in IMG/M
3300005993\|Ga0080027_10002427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7170	Open in IMG/M
3300005993\|Ga0080027_10101450	Not Available	1079	Open in IMG/M
3300006052\|Ga0075029_100009634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	5323	Open in IMG/M
3300006052\|Ga0075029_100120283	Not Available	1593	Open in IMG/M
3300006162\|Ga0075030_101101258	Not Available	625	Open in IMG/M
3300006162\|Ga0075030_101515619	Not Available	525	Open in IMG/M
3300009519\|Ga0116108_1049136	Not Available	1342	Open in IMG/M
3300009614\|Ga0116104_1027188	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300009621\|Ga0116116_1140068	Not Available	640	Open in IMG/M
3300009662\|Ga0105856_1332099	Not Available	516	Open in IMG/M
3300010339\|Ga0074046_10512207	Not Available	716	Open in IMG/M
3300010376\|Ga0126381_100060187	All Organisms → cellular organisms → Bacteria	4688	Open in IMG/M
3300010379\|Ga0136449_100147344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4632	Open in IMG/M
3300010379\|Ga0136449_100969144	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300010379\|Ga0136449_102912862	Not Available	671	Open in IMG/M
3300014151\|Ga0181539_1008771	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	7140	Open in IMG/M
3300014155\|Ga0181524_10388584	Not Available	612	Open in IMG/M
3300014159\|Ga0181530_10309998	Not Available	825	Open in IMG/M
3300014165\|Ga0181523_10030433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3475	Open in IMG/M
3300014491\|Ga0182014_10078475	All Organisms → cellular organisms → Bacteria → Acidobacteria	2084	Open in IMG/M
3300014491\|Ga0182014_10585335	Not Available	540	Open in IMG/M
3300014491\|Ga0182014_10595649	Not Available	534	Open in IMG/M
3300014494\|Ga0182017_10085881	All Organisms → cellular organisms → Bacteria → Acidobacteria	2069	Open in IMG/M
3300014494\|Ga0182017_10118420	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300014494\|Ga0182017_10393832	Not Available	858	Open in IMG/M
3300014494\|Ga0182017_10551860	Not Available	704	Open in IMG/M
3300014496\|Ga0182011_10069179	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300014496\|Ga0182011_10195875	Not Available	1376	Open in IMG/M
3300014496\|Ga0182011_10399839	Not Available	896	Open in IMG/M
3300014496\|Ga0182011_10432568	Not Available	854	Open in IMG/M
3300014496\|Ga0182011_10851421	Not Available	569	Open in IMG/M
3300014496\|Ga0182011_10855928	Not Available	567	Open in IMG/M
3300014498\|Ga0182019_10143940	Not Available	1505	Open in IMG/M
3300014498\|Ga0182019_10599856	Not Available	773	Open in IMG/M
3300014502\|Ga0182021_10434628	Not Available	1560	Open in IMG/M
3300014502\|Ga0182021_11435219	Not Available	831	Open in IMG/M
3300014502\|Ga0182021_11563527	Not Available	794	Open in IMG/M
3300014502\|Ga0182021_11586033	Not Available	788	Open in IMG/M
3300014502\|Ga0182021_12749905	Not Available	591	Open in IMG/M
3300014502\|Ga0182021_13769607	Not Available	503	Open in IMG/M
3300014838\|Ga0182030_11250461	Not Available	630	Open in IMG/M
3300014839\|Ga0182027_10170006	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300014839\|Ga0182027_10205207	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300014839\|Ga0182027_10247625	All Organisms → cellular organisms → Bacteria → Acidobacteria	2039	Open in IMG/M
3300014839\|Ga0182027_10846093	Not Available	952	Open in IMG/M
3300014839\|Ga0182027_11879415	Not Available	577	Open in IMG/M
3300015197\|Ga0167638_1013324	Not Available	1947	Open in IMG/M
3300017929\|Ga0187849_1086023	Not Available	1361	Open in IMG/M
3300017935\|Ga0187848_10157882	Not Available	995	Open in IMG/M
3300017938\|Ga0187854_10149252	Not Available	1062	Open in IMG/M
3300017941\|Ga0187850_10010430	All Organisms → cellular organisms → Bacteria → Acidobacteria	6022	Open in IMG/M
3300017975\|Ga0187782_10691310	Not Available	786	Open in IMG/M
3300018015\|Ga0187866_1257881	Not Available	624	Open in IMG/M
3300018020\|Ga0187861_10413306	Not Available	564	Open in IMG/M
3300018024\|Ga0187881_10105923	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300019788\|Ga0182028_1025440	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300019788\|Ga0182028_1099966	Not Available	1443	Open in IMG/M
3300019788\|Ga0182028_1319898	Not Available	1822	Open in IMG/M
3300021478\|Ga0210402_10003378	All Organisms → cellular organisms → Bacteria → Acidobacteria	15012	Open in IMG/M
3300021559\|Ga0210409_10682053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300021858\|Ga0213852_1511872	All Organisms → cellular organisms → Bacteria → Acidobacteria	2015	Open in IMG/M
3300021861\|Ga0213853_10021533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1814	Open in IMG/M
3300021861\|Ga0213853_10754934	Not Available	1587	Open in IMG/M
3300021861\|Ga0213853_11123350	Not Available	1726	Open in IMG/M
3300022524\|Ga0224534_1011457	All Organisms → cellular organisms → Bacteria → Acidobacteria	2708	Open in IMG/M
3300022524\|Ga0224534_1065568	Not Available	698	Open in IMG/M
3300022533\|Ga0242662_10086263	Not Available	874	Open in IMG/M
3300023258\|Ga0224535_1137616	Not Available	512	Open in IMG/M
3300024233\|Ga0224521_1122939	Not Available	553	Open in IMG/M
3300026215\|Ga0209849_1000091	All Organisms → cellular organisms → Bacteria	12488	Open in IMG/M
3300026221\|Ga0209848_1002676	All Organisms → cellular organisms → Bacteria → Acidobacteria	3907	Open in IMG/M
3300026281\|Ga0209863_10002213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	7105	Open in IMG/M
3300026281\|Ga0209863_10074361	Not Available	1002	Open in IMG/M
3300026317\|Ga0209154_1157727	Not Available	935	Open in IMG/M
3300027825\|Ga0209039_10001390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	22637	Open in IMG/M
3300027854\|Ga0209517_10564370	Not Available	609	Open in IMG/M
3300027898\|Ga0209067_10000805	All Organisms → cellular organisms → Bacteria → Acidobacteria	19644	Open in IMG/M
3300027911\|Ga0209698_11438992	Not Available	501	Open in IMG/M
3300029889\|Ga0246001_1043673	Not Available	1021	Open in IMG/M
3300031232\|Ga0302323_100698673	Not Available	1108	Open in IMG/M
3300031235\|Ga0265330_10095589	Not Available	1274	Open in IMG/M
3300031344\|Ga0265316_10037072	All Organisms → cellular organisms → Bacteria	3939	Open in IMG/M
3300031344\|Ga0265316_10092467	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300031344\|Ga0265316_10208232	Not Available	1447	Open in IMG/M
3300031344\|Ga0265316_10397092	Not Available	993	Open in IMG/M
3300032160\|Ga0311301_10155573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4112	Open in IMG/M
3300033402\|Ga0326728_10018585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13671	Open in IMG/M
3300033402\|Ga0326728_10027757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella rosea	9870	Open in IMG/M
3300033402\|Ga0326728_10032130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8762	Open in IMG/M
3300033402\|Ga0326728_10205076	All Organisms → cellular organisms → Bacteria → Acidobacteria	1976	Open in IMG/M
3300033402\|Ga0326728_10487429	Not Available	1008	Open in IMG/M
3300033405\|Ga0326727_10097354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3905	Open in IMG/M
3300033405\|Ga0326727_10380449	Not Available	1312	Open in IMG/M
3300033405\|Ga0326727_10467956	Not Available	1114	Open in IMG/M
3300033405\|Ga0326727_10605361	Not Available	910	Open in IMG/M
3300033755\|Ga0371489_0000350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	88330	Open in IMG/M
3300033797\|Ga0334815_035209	Not Available	614	Open in IMG/M
3300033890\|Ga0334810_112932	Not Available	654	Open in IMG/M
3300033891\|Ga0334811_042936	Not Available	1229	Open in IMG/M
3300033891\|Ga0334811_082048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300033983\|Ga0371488_0224475	Not Available	932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.28%
Host-Associated	Host-Associated	4.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.81%
Aquatic	Environmental → Aquatic	25.47%
Plants	Host-Associated → Plants	4.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Freshwater	Environmental → Aquatic → Freshwater	19.81%
Peat	Environmental → Terrestrial → Peat	19.81%
Sediment	Environmental → Aquatic → Sediment	5.66%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	37.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	19.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.77%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	35.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	19.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.94%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	24.53%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	10.38%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	7.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.66%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.77%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.77%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	3.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.94%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023258	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 30-34	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026221	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033797	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-S	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300033891	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-D	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B_all_v_01860440	2140918024	Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKR
JGI26339J46600_100776652	3300003218	Bog Forest Soil	MRIAGFLLLLAGWGIVLSAIALLRPASPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR*
Ga0062388_1001373162	3300004635	Bog Forest Soil	MRILGFMLLLAGWVIVVCALALLQPAPRVAFVFAGVGVEVLGLVLVIRSHPLLRGEE*
Ga0066679_108565732	3300005176	Soil	MRIAGFLLLLAGWGIVLSAVALLTAAPARSAFAVSGMGVEVLGLALVIRTHMTPRGERP*
Ga0066791_100171202	3300005949	Soil	MRLAGFLLLLAGWGIVLSAVALLQSPPARSAFAIAGVGVEALGLALAIRSHIVPRGDRS*
Ga0080027_100024273	3300005993	Prmafrost Soil	MKVAGFLLLLAGWGIVLSAAALLKPSAARSVFALAGAGVEVMGLVLAIRSHIVPKGDRS*
Ga0080027_101014502	3300005993	Prmafrost Soil	MKVAGFLLLLAGWGIVLSAAALLKPSAARSLFVVAGAGVEVMGLVLVVRSHIVPKGDRS*
Ga0075029_1000096342	3300006052	Watersheds	MRIAGFLLLLAGWGIVLSAAALLKPTGARGAFALAGVGVEVMGLVLVIRSHMTPKGDRP*
Ga0075029_1001202832	3300006052	Watersheds	MRVAGFLLLLAGWGIVLSAAALLKPSAARSAFALAGAGVEVMGLVLVIRSHIVRKGDRS*
Ga0075030_1011012582	3300006162	Watersheds	MRIAGFLLLLAGWGIVLSAAALLKPTAARTAFALAGTGVEVMGLALVIRSHIAPKGDRS*
Ga0075030_1015156191	3300006162	Watersheds	VCSTSARDEAPRPMRVAGFLLLLAGWGIVLSAAALLKPSAARTAFVLAGVGVELMGLVVVIRSHIAPKGDRS*
Ga0116108_10491362	3300009519	Peatland	MRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR*
Ga0116104_10271882	3300009614	Peatland	MRIAGFLLLLAGWGIVLSAVALLRPVSPIAGFVMAGTGVEVLGLVLVIRSHRFPRGERR*
Ga0116116_11400681	3300009621	Peatland	MRIAGFLLLLAGWGIVLAAIALLGSSSAIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR*
Ga0105856_13320991	3300009662	Permafrost Soil	MRLAGFLLLLAGWGIVLSAVALLKSPAARSAFVIAGVGVEAMGMALAIRSHIVPRGERS*
Ga0074046_105122071	3300010339	Bog Forest Soil	MRIAGFLLLLAGWGIVLSAIALLRSPSLIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR*
Ga0126381_1000601874	3300010376	Tropical Forest Soil	MRIAGFLMLLAGWGIVLSAAALLKTSAARIAFVLAGAGVEVLGLVLVIRSHIVPKGDRYE
Ga0136449_1001473442	3300010379	Peatlands Soil	MKVAGFLLLFAGWAIVIAAIALLKASLAQSCFALAGAGVEVLGLTLVIRSHLFVRTERT*
Ga0136449_1009691442	3300010379	Peatlands Soil	MRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR*
Ga0136449_1029128622	3300010379	Peatlands Soil	LLSGWGLVLATVALLRSALPQAGFVLAGLGVQALGLVLVIRSHLVLHRERE*
Ga0181539_10087712	3300014151	Bog	MRIAGFLLLLAGWGIVLCAVALLRPSSPIAGFVAAGTGVEVLGLVLVVRSHRLLRREKR*
Ga0181524_103885842	3300014155	Bog	MRIAGFLLLLAGWGIVLSAVALLASPSLITGFVMAGTGVELLGLVLVIRS
Ga0181530_103099982	3300014159	Bog	MRIAGFLLLLAGWGIVLSAIALLGSPSLIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR*
Ga0181523_100304334	3300014165	Bog	MRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSH
Ga0182014_100784752	3300014491	Bog	MRIAGFLLLLAGWGIVLSAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLLRRERK*
Ga0182014_105853352	3300014491	Bog	MRIAGFLLLLAGWGIVLSAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR*
Ga0182014_105956491	3300014491	Bog	MRIAGFLLLLAGWGIVLCAIALLGPSSLIAGFVAAGTGVEVLGLVLVVRSHRLLRRERR*
Ga0182017_100858812	3300014494	Fen	MRIAGFLLLLAGWGIVLSAVALLRPSSPIAGFATAGTGVEVLGLVLVIRSYRLVRRERR*
Ga0182017_101184202	3300014494	Fen	MRIAGFLLLLAGWGIVLCAIALLRPYSPIAGFVTAGTGVELLGLVLVIRSHRLVRRERR*
Ga0182017_103938321	3300014494	Fen	LLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKK*
Ga0182017_105518601	3300014494	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR*
Ga0182011_100691793	3300014496	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKK*
Ga0182011_101958752	3300014496	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLVRRERR*
Ga0182011_103998392	3300014496	Fen	MRIAGFLLLLAGWGIVLSAIALLRPSSPIAAFVTAGTGVEILGLVLVIRSHRLIRRERR*
Ga0182011_104325681	3300014496	Fen	IAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR*
Ga0182011_108514212	3300014496	Fen	LARAAVRAIGYPELGAMRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVVGLVLVVRSHRLIRRERR*
Ga0182011_108559282	3300014496	Fen	ARAPVCAIGYPEFGAMKIAGFLLLLAGWGIVLGAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLLRRERK*
Ga0182019_101439401	3300014498	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKR*
Ga0182019_105998561	3300014498	Fen	KKTCVLPRTVVCAIGYPELGAMRIAGFLLLLAGWGIVLCAIALLRPASPIAGFVTAGTAVEVLGLVLVIRSHRLPRRERR*
Ga0182021_104346281	3300014502	Fen	MRIAGFLLLLAGWGIVLCAIALLRHSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKR*
Ga0182021_114352192	3300014502	Fen	GAMRIAGFLLLLAGWGIVLCAIALLRPSSLIAAFVTAGTGVEILGLVLVIRSHRLIRKERG*
Ga0182021_115635272	3300014502	Fen	LKNSRGLARAAVRAIGYPELGAMRIAGFLLLLAGWGIVLSAIALLGSPSPMAGFVTAGTGVEVMGLVLVIRSHRLPRRERR*
Ga0182021_115860332	3300014502	Fen	MRIAGFLLLLAGWGIVLTAIALLRPASPIAGFVTAGTGVELLGLVLVVRSHRLIRKERR*
Ga0182021_127499051	3300014502	Fen	MAGFLLLLAGWGIVVSAIALLGPSSPIAGFVTAGTGVEVLGLVLVVRSHRLPRRERR*
Ga0182021_137696072	3300014502	Fen	CAISYPELGAMRIAGFLLLLAGWGIVLCAVALLRPASPIAGFVTAGTGVEVLGLVLVIRSHRLPRRERR*
Ga0182030_112504612	3300014838	Bog	MRIAGFLLLLAGWGIVLCAIALLRPSSIIAGFVAAGTGVEVLGLVLVIRSHRLVRRERR*
Ga0182027_101700063	3300014839	Fen	LKNSRGLARAAVGAIGYPELGAMRIAGFLLLLAGWGIVLSAIALLGSPSPMAGFVTAGTGVEVMGLVLVIRSHRLPRRERR*
Ga0182027_102052072	3300014839	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRREKR*
Ga0182027_102476253	3300014839	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIPGFVTAGTGVEVLGLVLVIRSHRLIRREKR*
Ga0182027_108460932	3300014839	Fen	ARAAVRAIGYPELGAMRIAGFLLLLAGWGIVLCAIALLRPSSPISGFVTAGTGVEVVGLVLVVRSHRLIRRERR*
Ga0182027_118794152	3300014839	Fen	FLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVVRSHRLIRRERR*
Ga0167638_10133242	3300015197	Glacier Forefield Soil	MRLAGFLLLLAGWGIVLSAVALLKSPAPRSAFAISGAGVEVMGLAFVIRSHIVPRGERS*
Ga0187849_10860232	3300017929	Peatland	MRIAGFLLLLAGWGIVLCAIALLRPPSPIAGFVTAGTGVEVLGLVLVVRSHRLLRREKR
Ga0187848_101578822	3300017935	Peatland	MRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR
Ga0187854_101492522	3300017938	Peatland	LLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR
Ga0187850_100104303	3300017941	Peatland	MRIAGFLLLLAGWGIVLSAVALLRPVSPIAGFVMAGTGVEVLGLVLVIRSHRFPRGERR
Ga0187782_106913101	3300017975	Tropical Peatland	MRIAGFLLLLAGWVIVMSAVALLPAGAPRGGFSAAGVAVQALGLVLALRSHVSLKGERW
Ga0187866_12578812	3300018015	Peatland	WVRSHRGGLIGYPELGVMRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR
Ga0187861_104133061	3300018020	Peatland	MRIAGFLLLLAGWGIVLAAIALLRSPSPITGFVTAGTGVELLGLVLVIRSHRLLRRERR
Ga0187881_101059232	3300018024	Peatland	MKIAGFLLLLAGWGIVLSAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR
Ga0182028_10254402	3300019788	Fen	MRIAGFLLLLAGWGIVLCAIALLRHSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKR
Ga0182028_10999662	3300019788	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLLLVVRSHRLLRREKK
Ga0182028_13198983	3300019788	Fen	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVIRSHRLVRRERR
Ga0210402_100033786	3300021478	Soil	MKVAGFLLLMAGWGIVLSAAALLKPSAARSVFALAGAGVEVMGLVLVIRSHIVPKGDRS
Ga0210409_106820532	3300021559	Soil	MRLAGFLLLLAGWGIVVSAVALLKSPGARSAFAISGAGVEAMGLVLVIRSHIVRRGER
Ga0213852_15118722	3300021858	Watersheds	MRVAGFLLLLAGWGIVLSAAALLKPSAARSAFALAGAGVEAMGLVLVIRSHIVRKGDRS
Ga0213853_100215332	3300021861	Watersheds	MRVAGFLLLLAGWGIVLSAAALLKPSAARSAFALAGAGVEVMGLVLVIRSHIVRKGDRS
Ga0213853_107549341	3300021861	Watersheds	STIARDEAPHHMRVAGFLLLLAGWGIVLSAAALLKPSAARSAFALAGAGVEAMGLVLVVRSHIVRKGDRS
Ga0213853_111233502	3300021861	Watersheds	SGVRMKIAGFLLLLAGWGIVLSAAALLKPTGARGAFTLAGVGVEIMGLVLVIRSHMTSKGDRS
Ga0224534_10114572	3300022524	Soil	MRIAGFLLLLAGWGIVLSAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLLRRERK
Ga0224534_10655682	3300022524	Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPIPGFVTAGTGVEVLGLVLVIRSHRLIRREKR
Ga0242662_100862631	3300022533	Soil	DMKVAGFLLLLAGWGIVLSAAALLKPSAARSVFTLAGAGVEVMGLVLVIRSHIVPKGDRS
Ga0224535_11376161	3300023258	Soil	MRIAGFLLLLAGWGIVLSAIALLRSSSPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR
Ga0224521_11229391	3300024233	Soil	MSTMGYPELGAMRIAGFLLLLAGWGIVLSAVALLRPSSPIAGFATAGTGVEVLGLVLVIRSYRLVRRERR
Ga0209849_10000916	3300026215	Soil	MRLAGFLLLLAGWGIVLSAVALLKSPPARSAFAIAGVGVEALGLALAIRSHIVPRGERS
Ga0209848_10026762	3300026221	Permafrost Soil	MRLAGFLLLLAGWGIVLSAVALLQSPPARSAFAIAGVGVEALGLALAIRSHIVPRGDRS
Ga0209863_100022133	3300026281	Prmafrost Soil	MKVAGFLLLLAGWGIVLSAAALLKPSAARSVFALAGAGVEVMGLVLAIRSHIVPKGDRS
Ga0209863_100743612	3300026281	Prmafrost Soil	MKVAGFLLLLAGWGIVLSAAALLKPSAARSLFVVAGAGVEVMGLVLVVRSHIVPKGDRS
Ga0209154_11577271	3300026317	Soil	MRIAGFLLLLAGWGIVLSAVALLTAAPARSAFAVSGMGVEVLGLALVIRTHMTPRGERP
Ga0209039_1000139010	3300027825	Bog Forest Soil	MRIAGFLLLLAGWGIVLSAIALLRPASPIAGFVTAGTGVEVLGLVLVIRSHRLIRRERR
Ga0209517_105643701	3300027854	Peatlands Soil	MRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR
Ga0209067_100008058	3300027898	Watersheds	MRIAGFLLLLAGWGIVLSAAALLKPTGARGAFALAGVGVEVMGLVLVIRSHMTPKGDRP
Ga0209698_114389921	3300027911	Watersheds	VCSTSARDEASRPMRIAGFLLLLAGWGIVLSAAALLKPTAARTAFALAGTGVEVMGLALVIRSHIAPKGDRS
Ga0246001_10436732	3300029889	Peat	LIGYPELGVMRIAGFLLLLAGWGIVLSAVVLLRSPSLIAGFVMAGTGVEVLGLVLVIRSHRLLRRERR
Ga0302323_1006986731	3300031232	Fen	MRIAGFLLLLAGWVIVLSAVALLRPSSPIAGFVIAGTGVEILGLVLVIRSHRLIRRERR
Ga0265330_100955892	3300031235	Rhizosphere	MRIAGFLLLLAGWGIVLSAIALLRPSSPIAAFVTAGTGVEILGLVLVIRSHRLIRRERR
Ga0265316_100370723	3300031344	Rhizosphere	MRIAGFLLLLAGWGIVLTAIALLKPSSPVAGFVTAGTGVEVLGLVLAIRSFRPIRRERR
Ga0265316_100924671	3300031344	Rhizosphere	MRIAGFLLLLAGWGIVLCAIALLRPASPIAGFVTAGTAVEVLGLVLVIRSHR
Ga0265316_102082321	3300031344	Rhizosphere	YPEFGAMRIAGFLLLLAGWGIVLSAIALLRPSSPIAAFVTAGTGVEILGLVLVIRSHRLIRRERR
Ga0265316_103970922	3300031344	Rhizosphere	SKKTCVPPRTFVCAISYPELGAMRIAGFLLLLAGWGIVLCAIALLRPASPIAGFVTAGTAVEVLGLVLVIRSHRLPRRERR
Ga0311301_101555732	3300032160	Peatlands Soil	MKVAGFLLLFAGWAIVIAAIALLKASLAQSCFALAGAGVEVLGLTLVIRSHLFVRTERT
Ga0326728_1001858510	3300033402	Peat Soil	MRIAGFLLLLAGWGIVLCAVALLRPSSPIAGFVAAGTGVEVLGLVLVVRSHRLLRREKR
Ga0326728_100277578	3300033402	Peat Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPITGFVTAGTGVEVLGLVLVVRSHRLLRREKR
Ga0326728_100321303	3300033402	Peat Soil	MRIAGFLLLLAGWGIVLCAIALLGSPSPIAAFVTAGTGVEVLGLVLVIRSHRLLRRERR
Ga0326728_102050763	3300033402	Peat Soil	PRCPIGYPEFGAMRIAGFLLLLAGWGIVLGAIALLQPSSPIAAFVTAGAGVEVLGLVLVIRSHRLVRRERR
Ga0326728_104874292	3300033402	Peat Soil	MRIAGFLLLLAGWGIVLSAIALLSSPSQIAGFVTAGMGVEAIGLVLEIRSHRLLRRERR
Ga0326727_100973542	3300033405	Peat Soil	MRIAGFLLLLAGWGIVLGAIALLQPSSPIAAFVTAGTGVEVLGLVLVIRSHRLVRRERR
Ga0326727_103804492	3300033405	Peat Soil	VRAIGYPVLGVMRIAGFLLLLAGWGIVLGAIALLRSPSSIAGFVTAGTGVEVLGLVLVVRSHRLLRRERR
Ga0326727_104679561	3300033405	Peat Soil	MRIAGFLLLLAGWGIVLSAVALLGSPSQITSFAMAGMGVELLGLGLVIRSHRLLRRERR
Ga0326727_106053612	3300033405	Peat Soil	MRIAGFLLLLAGWGIVLSAIALLGSPSLIAGFVTAGTGVEVLGLVLVIRSHRLLRRERR
Ga0371489_0000350_67591_67770	3300033755	Peat Soil	MRIAGFLLLLAGWGIVLSAIALLGSPSQIAGFVTAGMGVEVLGLALEIRSHRLLRRERR
Ga0334815_035209_448_612	3300033797	Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPISGFVTAGTGVEVLGLVLVIRSHRLIR
Ga0334810_112932_71_250	3300033890	Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAGFVTAGTGVEVLGLVLVVRSHRLLRREKR
Ga0334811_042936_3_242	3300033891	Soil	KTCVLPRTVVCAIGYPELGAMRIAGFLLLLAGWGIVLCAIALLRPASPIAGFVTAGTAVEVLGLVLVIRSHRLPRREKR
Ga0334811_082048_676_834	3300033891	Soil	MRIAGFLLLLAGWGIVLCAIALLRPSSPIAAFVTAGTGVEVLGLVLVVRSHRL
Ga0371488_0224475_77_256	3300033983	Peat Soil	MRIAGFLLLLAGWGIVLGAVALLGSPSQITGFAIAGMGVEILGLGLVIRSHRLLRRERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094602

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences