Metagenome Family F094599

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094599
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	45 residues
Representative Sequence	VLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Number of Associated Samples	42
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	25.47 %
% of genes near scaffold ends (potentially truncated)	89.62 %
% of genes from short scaffolds (< 2000 bps)	74.53 %
Associated GOLD sequencing projects	41
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.528 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water (91.509 % of family members)
Environment Ontology (ENVO)	Unclassified (91.509 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (91.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 44.44% Coil/Unstructured: 55.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00385	Chromo	11.32
PF00078	RVT_1	0.94
PF03009	GDPD	0.94
PF02405	MlaE	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.94
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
All Organisms	root	All Organisms	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
cellular organisms	root	All Organisms → cellular organisms	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	25.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	16.98 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	15.09 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	15.09 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	13.21 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	13.21 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Chlamydomonadales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	13.21 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Dunaliellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae	12.26 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Dunaliella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella	12.26 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.53 %
Dunaliella tertiolecta	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	8.49 %
Dunaliella viridis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	3.77 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918027\|contig06356	Not Available	1316	Open in IMG/M
3300005930\|Ga0075106_1028071	All Organisms → cellular organisms → Eukaryota → Viridiplantae	942	Open in IMG/M
3300011177\|Ga0136574_123278	All Organisms → cellular organisms → Eukaryota	572	Open in IMG/M
3300012103\|Ga0136578_128108	Not Available	532	Open in IMG/M
3300012111\|Ga0136577_1022132	All Organisms → cellular organisms → Eukaryota	613	Open in IMG/M
3300012115\|Ga0136592_1014062	Not Available	775	Open in IMG/M
3300012145\|Ga0136566_1056178	Not Available	637	Open in IMG/M
3300025361\|Ga0208412_1018284	Not Available	1028	Open in IMG/M
3300028349\|Ga0306915_118005	Not Available	502	Open in IMG/M
3300031209\|Ga0307955_1087297	Not Available	577	Open in IMG/M
3300031210\|Ga0307964_1084134	Not Available	591	Open in IMG/M
3300031211\|Ga0307974_1020474	Not Available	3855	Open in IMG/M
3300031211\|Ga0307974_1034250	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	2622	Open in IMG/M
3300031211\|Ga0307974_1042713	Not Available	2214	Open in IMG/M
3300031211\|Ga0307974_1116801	Not Available	941	Open in IMG/M
3300031211\|Ga0307974_1132663	Not Available	829	Open in IMG/M
3300031212\|Ga0307959_1051384	Not Available	1197	Open in IMG/M
3300031212\|Ga0307959_1061604	Not Available	1051	Open in IMG/M
3300031212\|Ga0307959_1162568	All Organisms → cellular organisms → Eukaryota	536	Open in IMG/M
3300031213\|Ga0307937_1093942	Not Available	620	Open in IMG/M
3300031217\|Ga0307940_1033880	Not Available	1126	Open in IMG/M
3300031218\|Ga0307976_1084412	Not Available	698	Open in IMG/M
3300031219\|Ga0307973_1029987	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	851	Open in IMG/M
3300031220\|Ga0307939_1099692	Not Available	619	Open in IMG/M
3300031221\|Ga0307948_1009640	Not Available	6863	Open in IMG/M
3300031221\|Ga0307948_1021358	All Organisms → cellular organisms → Eukaryota	3984	Open in IMG/M
3300031221\|Ga0307948_1027032	Not Available	3304	Open in IMG/M
3300031221\|Ga0307948_1042154	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	2239	Open in IMG/M
3300031221\|Ga0307948_1054893	Not Available	1765	Open in IMG/M
3300031221\|Ga0307948_1139341	Not Available	726	Open in IMG/M
3300031222\|Ga0307972_1018302	All Organisms → cellular organisms → Eukaryota	3959	Open in IMG/M
3300031222\|Ga0307972_1019384	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	3841	Open in IMG/M
3300031222\|Ga0307972_1026302	Not Available	3255	Open in IMG/M
3300031222\|Ga0307972_1099167	Not Available	1207	Open in IMG/M
3300031222\|Ga0307972_1135820	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	876	Open in IMG/M
3300031222\|Ga0307972_1143730	Not Available	822	Open in IMG/M
3300031222\|Ga0307972_1153861	Not Available	763	Open in IMG/M
3300031225\|Ga0307942_1007698	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	8056	Open in IMG/M
3300031225\|Ga0307942_1011745	All Organisms → cellular organisms → Eukaryota → Viridiplantae	5954	Open in IMG/M
3300031225\|Ga0307942_1029340	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	2913	Open in IMG/M
3300031225\|Ga0307942_1030823	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	2801	Open in IMG/M
3300031225\|Ga0307942_1041516	Not Available	2222	Open in IMG/M
3300031225\|Ga0307942_1169165	All Organisms → cellular organisms → Eukaryota	601	Open in IMG/M
3300031243\|Ga0307970_1146521	Not Available	512	Open in IMG/M
3300031333\|Ga0307936_1012780	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	2570	Open in IMG/M
3300031333\|Ga0307936_1073185	Not Available	996	Open in IMG/M
3300031333\|Ga0307936_1074951	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	982	Open in IMG/M
3300031333\|Ga0307936_1091960	Not Available	868	Open in IMG/M
3300031334\|Ga0307969_1044854	Not Available	1098	Open in IMG/M
3300031334\|Ga0307969_1076410	Not Available	805	Open in IMG/M
3300031334\|Ga0307969_1080784	Not Available	777	Open in IMG/M
3300031334\|Ga0307969_1109140	Not Available	640	Open in IMG/M
3300031335\|Ga0307951_1041874	Not Available	1905	Open in IMG/M
3300031335\|Ga0307951_1047604	Not Available	1684	Open in IMG/M
3300031335\|Ga0307951_1082960	Not Available	933	Open in IMG/M
3300031339\|Ga0307932_1050375	Not Available	1123	Open in IMG/M
3300031339\|Ga0307932_1099145	Not Available	765	Open in IMG/M
3300031339\|Ga0307932_1199262	Not Available	506	Open in IMG/M
3300031343\|Ga0307952_1045946	Not Available	1766	Open in IMG/M
3300031343\|Ga0307952_1054493	Not Available	1549	Open in IMG/M
3300031343\|Ga0307952_1084962	Not Available	1048	Open in IMG/M
3300031343\|Ga0307952_1143671	Not Available	605	Open in IMG/M
3300031382\|Ga0307971_1078555	Not Available	1035	Open in IMG/M
3300031387\|Ga0307947_1027027	Not Available	2578	Open in IMG/M
3300031387\|Ga0307947_1046324	All Organisms → cellular organisms → Eukaryota	1612	Open in IMG/M
3300031391\|Ga0307954_1075277	Not Available	1079	Open in IMG/M
3300031391\|Ga0307954_1083566	Not Available	981	Open in IMG/M
3300031391\|Ga0307954_1132303	Not Available	613	Open in IMG/M
3300031391\|Ga0307954_1140736	Not Available	573	Open in IMG/M
3300031392\|Ga0307975_1025071	Not Available	2271	Open in IMG/M
3300031392\|Ga0307975_1038519	Not Available	1845	Open in IMG/M
3300031392\|Ga0307975_1204854	Not Available	597	Open in IMG/M
3300031392\|Ga0307975_1209501	Not Available	585	Open in IMG/M
3300031393\|Ga0307967_1039747	Not Available	2255	Open in IMG/M
3300031393\|Ga0307967_1093656	Not Available	1130	Open in IMG/M
3300031393\|Ga0307967_1106840	Not Available	1003	Open in IMG/M
3300031393\|Ga0307967_1114856	Not Available	937	Open in IMG/M
3300031393\|Ga0307967_1162366	Not Available	676	Open in IMG/M
3300031393\|Ga0307967_1214149	Not Available	526	Open in IMG/M
3300031394\|Ga0307963_1016425	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	4664	Open in IMG/M
3300031394\|Ga0307963_1041327	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	1929	Open in IMG/M
3300031395\|Ga0307957_1049849	Not Available	886	Open in IMG/M
3300031395\|Ga0307957_1083224	Not Available	663	Open in IMG/M
3300031395\|Ga0307957_1126895	Not Available	519	Open in IMG/M
3300031396\|Ga0307944_1020392	Not Available	1770	Open in IMG/M
3300031396\|Ga0307944_1145136	Not Available	599	Open in IMG/M
3300031397\|Ga0307960_1018693	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	3860	Open in IMG/M
3300031397\|Ga0307960_1026857	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	2936	Open in IMG/M
3300031399\|Ga0307968_1011618	Not Available	5937	Open in IMG/M
3300031399\|Ga0307968_1032033	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	2281	Open in IMG/M
3300031404\|Ga0307945_1058283	Not Available	1552	Open in IMG/M
3300031600\|Ga0307930_1018355	Not Available	3098	Open in IMG/M
3300031600\|Ga0307930_1041425	Not Available	1689	Open in IMG/M
3300031600\|Ga0307930_1140742	Not Available	749	Open in IMG/M
3300031600\|Ga0307930_1142283	Not Available	743	Open in IMG/M
3300031600\|Ga0307930_1216922	Not Available	542	Open in IMG/M
3300031607\|Ga0307966_1003605	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	11633	Open in IMG/M
3300031607\|Ga0307966_1017949	Not Available	4892	Open in IMG/M
3300031607\|Ga0307966_1092411	Not Available	1571	Open in IMG/M
3300031684\|Ga0307946_1056273	Not Available	1442	Open in IMG/M
3300031684\|Ga0307946_1073856	Not Available	1124	Open in IMG/M
3300031684\|Ga0307946_1080631	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	1035	Open in IMG/M
3300031684\|Ga0307946_1088158	Not Available	948	Open in IMG/M
3300031704\|Ga0307943_1098347	Not Available	1030	Open in IMG/M
3300031704\|Ga0307943_1185045	All Organisms → cellular organisms → Eukaryota	580	Open in IMG/M
3300031704\|Ga0307943_1189080	Not Available	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	100.00%

Habitat	Taxonomy	Distribution
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	99.06%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	99.06%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	91.51%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	7.55%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918027	Hypersaline microbial communities from Antarctic Deep Lake - 36m 3.0um, 0.8um, 0.1um pool	Environmental	Open in IMG/M
3300005930	Saline lake microbial communities from Deep Lake, Antarctica - Antarctic Deep Lake Metagenome 02WF4	Environmental	Open in IMG/M
3300011177	Saline lake microbial communities from Deep lake, Antarctica - Metagenome #134	Environmental	Open in IMG/M
3300012103	Saline lake microbial communities from Deep lake, Antarctica - Metagenome #190	Environmental	Open in IMG/M
3300012111	Saline lake microbial communities from Deep lake, Antarctica - Metagenome #186	Environmental	Open in IMG/M
3300012115	Saline lake microbial communities from Deep Lake, Antarctica - Metagenome TFF #256	Environmental	Open in IMG/M
3300012145	Saline lake microbial communities from Deep lake, Antarctica - Metagenome #2	Environmental	Open in IMG/M
3300025361	Saline lake microbial communities from Deep Lake, Antarctica - Antarctic Deep Lake Metagenome 02WF4 (SPAdes)	Environmental	Open in IMG/M
3300028349	Saline lake microbial communities from Deep Lake, Antarctica - Metagenome TFF 2006 #1 (v2)	Environmental	Open in IMG/M
3300031209	Saline water microbial communities from Organic Lake, Antarctica - #439	Environmental	Open in IMG/M
3300031210	Saline water microbial communities from Organic Lake, Antarctica - #596	Environmental	Open in IMG/M
3300031211	Saline water microbial communities from Organic Lake, Antarctica - #784	Environmental	Open in IMG/M
3300031212	Saline water microbial communities from Organic Lake, Antarctica - #494	Environmental	Open in IMG/M
3300031213	Saline water microbial communities from Organic Lake, Antarctica - #3	Environmental	Open in IMG/M
3300031217	Saline water microbial communities from Organic Lake, Antarctica - #124	Environmental	Open in IMG/M
3300031218	Saline water microbial communities from Organic Lake, Antarctica - #919	Environmental	Open in IMG/M
3300031219	Saline water microbial communities from Organic Lake, Antarctica - #782	Environmental	Open in IMG/M
3300031220	Saline water microbial communities from Organic Lake, Antarctica - #122	Environmental	Open in IMG/M
3300031221	Saline water microbial communities from Organic Lake, Antarctica - #280	Environmental	Open in IMG/M
3300031222	Saline water microbial communities from Organic Lake, Antarctica - #780	Environmental	Open in IMG/M
3300031225	Saline water microbial communities from Organic Lake, Antarctica - #175	Environmental	Open in IMG/M
3300031243	Saline water microbial communities from Organic Lake, Antarctica - #712	Environmental	Open in IMG/M
3300031333	Saline water microbial communities from Organic Lake, Antarctica - #1	Environmental	Open in IMG/M
3300031334	Saline water microbial communities from Organic Lake, Antarctica - #710	Environmental	Open in IMG/M
3300031335	Saline water microbial communities from Organic Lake, Antarctica - #374	Environmental	Open in IMG/M
3300031339	Saline water microbial communities from Organic Lake, Antarctica - #48	Environmental	Open in IMG/M
3300031343	Saline water microbial communities from Organic Lake, Antarctica - #376	Environmental	Open in IMG/M
3300031382	Saline water microbial communities from Organic Lake, Antarctica - #714	Environmental	Open in IMG/M
3300031387	Saline water microbial communities from Organic Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031391	Saline water microbial communities from Organic Lake, Antarctica - #437	Environmental	Open in IMG/M
3300031392	Saline water microbial communities from Organic Lake, Antarctica - #917	Environmental	Open in IMG/M
3300031393	Saline water microbial communities from Organic Lake, Antarctica - #648	Environmental	Open in IMG/M
3300031394	Saline water microbial communities from Organic Lake, Antarctica - #594	Environmental	Open in IMG/M
3300031395	Saline water microbial communities from Organic Lake, Antarctica - #490	Environmental	Open in IMG/M
3300031396	Saline water microbial communities from Organic Lake, Antarctica - #179	Environmental	Open in IMG/M
3300031397	Saline water microbial communities from Organic Lake, Antarctica - #542	Environmental	Open in IMG/M
3300031399	Saline water microbial communities from Organic Lake, Antarctica - #650	Environmental	Open in IMG/M
3300031404	Saline water microbial communities from Organic Lake, Antarctica - #228	Environmental	Open in IMG/M
3300031600	Saline water microbial communities from Organic Lake, Antarctica - #46	Environmental	Open in IMG/M
3300031607	Saline water microbial communities from Organic Lake, Antarctica - #646	Environmental	Open in IMG/M
3300031684	Saline water microbial communities from Organic Lake, Antarctica - #230	Environmental	Open in IMG/M
3300031704	Saline water microbial communities from Organic Lake, Antarctica - #177	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ADL36m2_01383570	2140918027	Hypersaline	VLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0075106_10280712	3300005930	Saline Lake	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDV*
Ga0136574_1232782	3300011177	Saline Lake	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNI
Ga0136578_1281081	3300012103	Saline Lake	VVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV*
Ga0136577_10221321	3300012111	Saline Lake	MLRGNSYLKMVQKVLKCDVTLLSIYNSDWSQKGKFNSCNI
Ga0136592_10140622	3300012115	Saline Lake	LRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNYSKNIITLDV*
Ga0136566_10561781	3300012145	Saline Lake	MLRGNSYPKVVQKVPKCDVTLLSIYNSDWCQKGKFNSCNI
Ga0208412_10182842	3300025361	Saline Lake	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNII
Ga0306915_1180051	3300028349	Saline Lake	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWCQKGKFNS
Ga0307955_10872972	3300031209	Saline Water	NCYLEVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307964_10841341	3300031210	Saline Water	WGGVLRGNSYLKVVQKVPKCDVTLLSIHNSDWIQKGKFNSCLQDIITLDV
Ga0307974_10204741	3300031211	Saline Water	MLRGNSYLKVVQEVPKCDVTLMSIYNSDWSQKGKFNSCNIITLDV
Ga0307974_10342501	3300031211	Saline Water	GNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307974_10427131	3300031211	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIIT
Ga0307974_11168012	3300031211	Saline Water	GVLRGNSYLKVVQKVPKCDVTILSIDNSDWSQKGKFNSCNIITLDV
Ga0307974_11326631	3300031211	Saline Water	KVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDV
Ga0307959_10513842	3300031212	Saline Water	RWGGVLRGNSYLEVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307959_10616041	3300031212	Saline Water	MQVNVLRGNSYLEVVQKVLKCDVTLLSNYNSDWSQKGKFNSCNIITLDV
Ga0307959_11625681	3300031212	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSINNSDWSQKGKFNSCNI
Ga0307937_10939421	3300031213	Saline Water	VRALSGNPYVKVVQKVPKCDVTLLSIDNSDWSQKGKFDSCNIITLDV
Ga0307940_10338803	3300031217	Saline Water	SARWGGVLRGNSYLKVVQKVPKCDVTLLSIDNSDSSQKGKFNSCNIITLDV
Ga0307976_10844121	3300031218	Saline Water	GNSYLKVVQKVPKRDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307973_10299872	3300031219	Saline Water	GMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307939_10996921	3300031220	Saline Water	IAMLRGSSYLKVVQKVPKRDVTLLSIYNSDWIQKGKFNSCNIVILDV
Ga0307948_10096401	3300031221	Saline Water	GNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDVKLLLI
Ga0307948_10213581	3300031221	Saline Water	CGYMGVAVKDCGCYMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307948_10270322	3300031221	Saline Water	MVLRGNSYLKVVQKVPKRDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307948_10421541	3300031221	Saline Water	SYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITIDV
Ga0307948_10548933	3300031221	Saline Water	GGVLRGNSYLKVVQKVPKCDVTILSIDNSDWSQKGKFNSCNIITLDV
Ga0307948_11393411	3300031221	Saline Water	FAEDGSARWGGVLCGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKLNSCNIITLDV
Ga0307972_10183021	3300031222	Saline Water	AVKDCGCYMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307972_10193841	3300031222	Saline Water	WGGVLRGNSYLKVVQKVLKCDVTLLSIYISDWSQKGKFNSCNIITLDV
Ga0307972_10263027	3300031222	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFN
Ga0307972_10991671	3300031222	Saline Water	MLRGNSYLKVVQKVPNCEVTLLSIYNSDWSQKGKFNSCNIITL
Ga0307972_11358201	3300031222	Saline Water	ARWGGVLRGNSYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307972_11437302	3300031222	Saline Water	LPFHYQRGRMLRGNSYLRVVQKVPMCDVTLLSIDNSDWSQKGKFNSCNIITLDV
Ga0307972_11538611	3300031222	Saline Water	NSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307942_100769813	3300031225	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307942_10117456	3300031225	Saline Water	MLRGNSYLKMVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDA
Ga0307942_10293406	3300031225	Saline Water	SYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307942_10308234	3300031225	Saline Water	DGSARWGGMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307942_10415164	3300031225	Saline Water	AKDGSARWGGVLRGNSYLKVVQKVPKCDVTLLSIDNSDSSQKGKFNSCNIITLDV
Ga0307942_11691652	3300031225	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNII
Ga0307970_11465211	3300031243	Saline Water	QPKHVQPKHAVLRGNSYLEVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307936_10127801	3300031333	Saline Water	ARWGGMLRGNSYLKMVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDA
Ga0307936_10731852	3300031333	Saline Water	AEDGSARWGGVLRGNSYLKVVQKVPKCDVTILSIDNSDWSQKGKFNSCNIITLDV
Ga0307936_10749512	3300031333	Saline Water	SYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307936_10919601	3300031333	Saline Water	VLRGISYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNS
Ga0307969_10448542	3300031334	Saline Water	VVQTVLKCDVTLLSIYNSDWSQKGKFNSXNVITLDV
Ga0307969_10764102	3300031334	Saline Water	VLRGNSYLKVVQKVLKCDVTLLSIYISDWSQKGKFNSCNIITLDV
Ga0307969_10807841	3300031334	Saline Water	PKCDVTLLSIDNSDWSQKGKFNSCNIITLDVKLLLI
Ga0307969_11091401	3300031334	Saline Water	NTWLSTEDGSARWGGVLRGNSYLKVVQKVPKCDVTLLSIYNSDLSQKGKFNS
Ga0307951_10418742	3300031335	Saline Water	GNYYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLNV
Ga0307951_10476042	3300031335	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIIT
Ga0307951_10829602	3300031335	Saline Water	GVLRGNSYLKVVQKVPKCDVTLLSIYNSDLSQKGKFNS
Ga0307932_10503751	3300031339	Saline Water	CYLEVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307932_10991451	3300031339	Saline Water	KVVQKIPKCDVTLLSIYNSDWSQKGKFNSCNIITLDA
Ga0307932_11992621	3300031339	Saline Water	VKDCGCYMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKF
Ga0307952_10459463	3300031343	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCN
Ga0307952_10544933	3300031343	Saline Water	MVLRGNSYLKVVQKVPKCDVTLRSIDNSDWSQKGKFNSCNI
Ga0307952_10849623	3300031343	Saline Water	VVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDV
Ga0307952_11436712	3300031343	Saline Water	EDGSARWGGVLRGNSYHRVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307971_10785551	3300031382	Saline Water	AVLRGNSYLEVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307947_10270274	3300031387	Saline Water	VQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307947_10463241	3300031387	Saline Water	VKDCGCYMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307954_10752771	3300031391	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIYNSDWSKKGKFNSCNIITLDV
Ga0307954_10835662	3300031391	Saline Water	GNSYLRVVQKVPKCDVTLMSIYNSDWSQKGKFSSCNIITLDV
Ga0307954_11323031	3300031391	Saline Water	NSYLKVVQKVPKCDVTLLSIYKSDWSQKGKFNSCNIITLDV
Ga0307954_11407361	3300031391	Saline Water	KHVQPKHAVLRGNSYLEVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307975_10250711	3300031392	Saline Water	FAKDGSARWGGVLRGNSYLKVVQKVPKCDVTLLSIDNSDSSQKGKFNSCNIITLDV
Ga0307975_10385191	3300031392	Saline Water	RGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGQFNSCNIITLDV
Ga0307975_12048541	3300031392	Saline Water	GSTRWGGVLRGNSYLKVVQKVLKCDVTLLSIYISDWSQKGKFNSCNIITLDV
Ga0307975_12095011	3300031392	Saline Water	MLRGNSYLTEVQKVPKCDVTILRNYNTDWSHKGKFNPCNITTLD
Ga0307967_10397472	3300031393	Saline Water	MVLRGNSYLKVVQKVPKCDVTLRSIDNSDWSQKGKFNSCNIITLDV
Ga0307967_10936563	3300031393	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDV
Ga0307967_11068401	3300031393	Saline Water	PCSSKGGVQLKNTWLSTEDGSARWGGVLRGNSYLKVVQKVPKCDVTLLSIYNSDLSQKGKFNS
Ga0307967_11148562	3300031393	Saline Water	VLRGNSYLKVVQKVPKCDVTILSIDNSDWSQKGKFNSCNIITLDV
Ga0307967_11623661	3300031393	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSC
Ga0307967_12141491	3300031393	Saline Water	FAEDGSARWGGVLRGNSYLRVVQKVPKCDVTLLSIYNGDWSQKGKFNSCNIITLDV
Ga0307963_10164254	3300031394	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307963_10413274	3300031394	Saline Water	VLRGISYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307957_10498491	3300031395	Saline Water	GNSYLKVVQKVLKCDVTLLSIYISDWSQKGKFNSCNIITLDV
Ga0307957_10832242	3300031395	Saline Water	GSARWGGVLRGNSYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307957_11268951	3300031395	Saline Water	GVLRGNSYLKVVQKVPKCDVTLLSIHNSDWIQKGKFNSCLQDIITLDV
Ga0307944_10203921	3300031396	Saline Water	PSKFVLRGNSYLRVVQKVPKCDVTLMSIYNSDWSQKGKFSSCNIITLDV
Ga0307944_11451361	3300031396	Saline Water	EDGSARWGGVLRGNSYLKVVQKVPKCDVTLLSIYNSDLSQKGKFNS
Ga0307960_10186931	3300031397	Saline Water	DGSTRWGGVLRGNSYLKVVQKVLKCDVTLLSIYISDWSQKGKFNSCNIITLDV
Ga0307960_10268576	3300031397	Saline Water	RWGGVLRGISYLKVVQKVLKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307968_101161813	3300031399	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSTYNSDWCQKGKFNSCNIYYH
Ga0307968_10320335	3300031399	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITIDV
Ga0307945_10582833	3300031404	Saline Water	MVLRGNSYLKVVQKVPKCDVTLRSIDNSDWSQKGKFNSCNII
Ga0307930_10183551	3300031600	Saline Water	YLKVVQKVPKCDVTLLSIYNSDWSQKGKFNYSKNIITLDV
Ga0307930_10414253	3300031600	Saline Water	RWGGVLRGNSYLKVVQKVPKCDVTLLSIDNSDSSQKGKFNSCNIITLDV
Ga0307930_11407421	3300031600	Saline Water	MLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCN
Ga0307930_11422831	3300031600	Saline Water	LRGNSYLKVVQKVPKCDVTLLSINNSDWSQKGKFNSCNIITLDVMLLFIESRSG
Ga0307930_12169221	3300031600	Saline Water	KVPKYDVTLLSIYNSDWSQKGKFNSCNIITLDVELLLI
Ga0307966_100360512	3300031607	Saline Water	MLRGNSYLTEVQKVPKCDVTILSIDNSDWSQKGKF
Ga0307966_10179491	3300031607	Saline Water	FAEDGSARWGGVLLGNSYLKVVQEVPKCDVTLLSIYNSDWSQKDKFNSCNIITLDV
Ga0307966_10924111	3300031607	Saline Water	YLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307946_10562732	3300031684	Saline Water	LKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLDVKLLLI
Ga0307946_10738561	3300031684	Saline Water	LRGNSYLKVVPKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDV
Ga0307946_10806311	3300031684	Saline Water	LRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLDVQLLLI
Ga0307946_10881581	3300031684	Saline Water	LRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLNV
Ga0307943_10983471	3300031704	Saline Water	DGSARWGGMLRGNSYLKVVQKVPKCDVTLLSIYNSDWSQKGKFNSCNIITLNV
Ga0307943_11850451	3300031704	Saline Water	VLRGNSYLEVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNII
Ga0307943_11890801	3300031704	Saline Water	VLRGNSYLKVVQKVPKCDVTLLSIDNSDWSQKGKFNSCNIITLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences