Metagenome / Metatranscriptome Family F094572

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094572
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	99 residues
Representative Sequence	MAAVAALVCLGVAGCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK
Number of Associated Samples	81
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	27.36 %
% of genes from short scaffolds (< 2000 bps)	65.09 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.377 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (28.302 % of family members)
Environment Ontology (ENVO)	Unclassified (78.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (61.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.84% β-sheet: 31.97% Coil/Unstructured: 58.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF13240	zinc_ribbon_2	16.04
PF13367	PrsW-protease	10.38
PF07885	Ion_trans_2	6.60
PF00912	Transgly	4.72
PF14329	DUF4386	2.83
PF13248	zf-ribbon_3	1.89
PF12704	MacB_PCD	1.89
PF07519	Tannase	0.94
PF00383	dCMP_cyt_deam_1	0.94
PF06439	3keto-disac_hyd	0.94
PF16576	HlyD_D23	0.94
PF02673	BacA	0.94
PF00561	Abhydrolase_1	0.94
PF12773	DZR	0.94
PF07883	Cupin_2	0.94
PF13676	TIR_2	0.94
PF14321	DUF4382	0.94
PF02952	Fucose_iso_C	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	4.72
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	4.72
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	4.72
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.94
COG2407	L-fucose isomerase or related protein	Carbohydrate transport and metabolism [G]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.38 %
Unclassified	root	N/A	39.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	33.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.96 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	22.64 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.62 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	22.64 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001398\|JGI20207J14881_1019958	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300001452\|JGI20203J14952_1023715	Not Available	667	Open in IMG/M
3300002245\|JGIcombinedJ26739_100922511	Not Available	756	Open in IMG/M
3300004082\|Ga0062384_101241100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	543	Open in IMG/M
3300004092\|Ga0062389_100717822	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300005541\|Ga0070733_10021388	All Organisms → cellular organisms → Bacteria	4025	Open in IMG/M
3300005591\|Ga0070761_10547112	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005712\|Ga0070764_10058144	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300005921\|Ga0070766_10424554	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300009518\|Ga0116128_1128050	Not Available	735	Open in IMG/M
3300009519\|Ga0116108_1004923	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	5838	Open in IMG/M
3300009547\|Ga0116136_1177380	Not Available	535	Open in IMG/M
3300009623\|Ga0116133_1001952	All Organisms → cellular organisms → Bacteria	5736	Open in IMG/M
3300009628\|Ga0116125_1068629	Not Available	919	Open in IMG/M
3300009632\|Ga0116102_1140306	Not Available	670	Open in IMG/M
3300009636\|Ga0116112_1055999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1157	Open in IMG/M
3300009636\|Ga0116112_1078472	Not Available	943	Open in IMG/M
3300009637\|Ga0116118_1259596	Not Available	532	Open in IMG/M
3300009644\|Ga0116121_1018587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2230	Open in IMG/M
3300014151\|Ga0181539_1089292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1322	Open in IMG/M
3300014156\|Ga0181518_10207090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1016	Open in IMG/M
3300014160\|Ga0181517_10118029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1524	Open in IMG/M
3300014161\|Ga0181529_10024503	All Organisms → cellular organisms → Bacteria	4842	Open in IMG/M
3300014161\|Ga0181529_10250064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1012	Open in IMG/M
3300014164\|Ga0181532_10017091	All Organisms → cellular organisms → Bacteria	5376	Open in IMG/M
3300014164\|Ga0181532_10179412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1254	Open in IMG/M
3300014168\|Ga0181534_10198194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1047	Open in IMG/M
3300014199\|Ga0181535_10000456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	61630	Open in IMG/M
3300014199\|Ga0181535_10004253	All Organisms → cellular organisms → Bacteria	16062	Open in IMG/M
3300014199\|Ga0181535_10038191	All Organisms → cellular organisms → Bacteria	3448	Open in IMG/M
3300014199\|Ga0181535_10144454	Not Available	1497	Open in IMG/M
3300014200\|Ga0181526_10211205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1240	Open in IMG/M
3300014201\|Ga0181537_11245284	Not Available	502	Open in IMG/M
3300014654\|Ga0181525_10338103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	824	Open in IMG/M
3300014655\|Ga0181516_10037876	Not Available	2456	Open in IMG/M
3300014655\|Ga0181516_10332526	Not Available	773	Open in IMG/M
3300014658\|Ga0181519_10998746	Not Available	520	Open in IMG/M
3300014838\|Ga0182030_10008428	All Organisms → cellular organisms → Bacteria	21335	Open in IMG/M
3300014838\|Ga0182030_11061650	Not Available	706	Open in IMG/M
3300017925\|Ga0187856_1002082	All Organisms → cellular organisms → Bacteria	15071	Open in IMG/M
3300017931\|Ga0187877_1033767	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300017931\|Ga0187877_1119710	Not Available	1081	Open in IMG/M
3300017931\|Ga0187877_1324314	Not Available	586	Open in IMG/M
3300017935\|Ga0187848_10046246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2115	Open in IMG/M
3300017935\|Ga0187848_10291701	Not Available	682	Open in IMG/M
3300017935\|Ga0187848_10380799	Not Available	582	Open in IMG/M
3300017938\|Ga0187854_10083526	Not Available	1523	Open in IMG/M
3300017938\|Ga0187854_10098613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1373	Open in IMG/M
3300017940\|Ga0187853_10055193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2026	Open in IMG/M
3300017940\|Ga0187853_10143223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1149	Open in IMG/M
3300017946\|Ga0187879_10076443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1938	Open in IMG/M
3300017988\|Ga0181520_10003953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25385	Open in IMG/M
3300017988\|Ga0181520_10017042	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8682	Open in IMG/M
3300017988\|Ga0181520_10241708	Not Available	1387	Open in IMG/M
3300017988\|Ga0181520_10273490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1279	Open in IMG/M
3300017996\|Ga0187891_1001767	All Organisms → cellular organisms → Bacteria	17741	Open in IMG/M
3300017996\|Ga0187891_1102276	Not Available	1080	Open in IMG/M
3300018002\|Ga0187868_1287676	Not Available	545	Open in IMG/M
3300018008\|Ga0187888_1064993	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1631	Open in IMG/M
3300018015\|Ga0187866_1195115	Not Available	755	Open in IMG/M
3300018016\|Ga0187880_1405673	Not Available	570	Open in IMG/M
3300018017\|Ga0187872_10122051	Not Available	1277	Open in IMG/M
3300018019\|Ga0187874_10069537	Not Available	1585	Open in IMG/M
3300018022\|Ga0187864_10084040	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1688	Open in IMG/M
3300018023\|Ga0187889_10120120	Not Available	1275	Open in IMG/M
3300018033\|Ga0187867_10267103	Not Available	962	Open in IMG/M
3300018033\|Ga0187867_10379243	Not Available	785	Open in IMG/M
3300018035\|Ga0187875_10534044	Not Available	621	Open in IMG/M
3300018040\|Ga0187862_10064293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2624	Open in IMG/M
3300018042\|Ga0187871_10652463	Not Available	585	Open in IMG/M
3300018043\|Ga0187887_10558507	Not Available	676	Open in IMG/M
3300019082\|Ga0187852_1084206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1421	Open in IMG/M
3300019082\|Ga0187852_1205951	Not Available	810	Open in IMG/M
3300021181\|Ga0210388_10014701	All Organisms → cellular organisms → Bacteria	6265	Open in IMG/M
3300021181\|Ga0210388_10271339	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300021405\|Ga0210387_10313027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1383	Open in IMG/M
3300021433\|Ga0210391_10067779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2826	Open in IMG/M
3300023068\|Ga0224554_1000903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21546	Open in IMG/M
3300023068\|Ga0224554_1000915	All Organisms → cellular organisms → Bacteria	21343	Open in IMG/M
3300023088\|Ga0224555_1002362	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22498	Open in IMG/M
3300024295\|Ga0224556_1011733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	2282	Open in IMG/M
3300025406\|Ga0208035_1074408	Not Available	514	Open in IMG/M
3300025473\|Ga0208190_1002483	All Organisms → cellular organisms → Bacteria	5752	Open in IMG/M
3300025574\|Ga0208717_1040362	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300025627\|Ga0208220_1007574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	3816	Open in IMG/M
3300025664\|Ga0208849_1000124	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	75460	Open in IMG/M
3300027619\|Ga0209330_1143913	Not Available	538	Open in IMG/M
3300027867\|Ga0209167_10415660	Not Available	734	Open in IMG/M
3300029889\|Ga0246001_1033335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1286	Open in IMG/M
3300029951\|Ga0311371_12593905	Not Available	512	Open in IMG/M
3300030872\|Ga0265723_1020882	Not Available	565	Open in IMG/M
3300031235\|Ga0265330_10000277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	38009	Open in IMG/M
3300031247\|Ga0265340_10065743	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300031249\|Ga0265339_10038682	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300031344\|Ga0265316_10319348	Not Available	1128	Open in IMG/M
3300031708\|Ga0310686_102946889	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7426	Open in IMG/M
3300031708\|Ga0310686_104532100	Not Available	564	Open in IMG/M
3300031708\|Ga0310686_108138265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1772	Open in IMG/M
3300031712\|Ga0265342_10034852	All Organisms → cellular organisms → Bacteria	3085	Open in IMG/M
3300031718\|Ga0307474_10004160	All Organisms → cellular organisms → Bacteria	10425	Open in IMG/M
3300032770\|Ga0335085_10008002	All Organisms → cellular organisms → Bacteria	16224	Open in IMG/M
3300032829\|Ga0335070_10210754	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1928	Open in IMG/M
3300033402\|Ga0326728_10007149	All Organisms → cellular organisms → Bacteria	29164	Open in IMG/M
3300033402\|Ga0326728_10244703	Not Available	1719	Open in IMG/M
3300033823\|Ga0334837_000984	All Organisms → cellular organisms → Bacteria	21331	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.28%
Host-Associated	Host-Associated	4.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	63.21%
Terrestrial	Environmental → Terrestrial	32.08%
Plants	Host-Associated → Plants	4.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.21%
Soil	Environmental → Terrestrial → Soil	23.58%
Peat	Environmental → Terrestrial → Peat	8.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	63.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	15.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.49%
Loam	Environmental → Terrestrial → Soil → Loam	4.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.77%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	50.94%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.26%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.66%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.89%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	28.30%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	20.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.26%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.94%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300023068	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 20-24	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20207J14881_10199582	3300001398	Arctic Peat Soil	MRSGWVAAAASLLCLSAVGCGSNVKGHTYAAADKSVTIDFQSGGTATVNFGGVPGTCTYAQSGKQVNLTCGGQTEALTVAEDGSLNGPPDGVMGHLTKVK*
JGI20203J14952_10237152	3300001452	Arctic Peat Soil	AVGCGSNVKGHTYAAADKSVTIDFQSGGTATVNFGGVPGTCTYAQSGKQVNLTCGGQTEALTVAEDGSLNGPPDGVMGHLTKVK*
JGIcombinedJ26739_1009225111	3300002245	Forest Soil	MMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK*
Ga0062384_1012411001	3300004082	Bog Forest Soil	CLSAVGCGSDVKGHSYAAADNSVTIDFQSGGAATVNFGGIPGTCTYTQSGKQINLTCGGQTEVLTVADDGSLNGPPDGAMGHLAKVK*
Ga0062389_1007178221	3300004092	Bog Forest Soil	VSELARPVTGKILREERQVKTMVRSGWLAAAAALLCLSAVGCGSDVKGHSYAAADNSVTIDFQSGGAATVNFGGIPGTCTYTQSGKQINLTCGGQTEVLTVADDGSLNGPPDGAMGHLAKVK*
Ga0070733_100213882	3300005541	Surface Soil	MRANIVGRCVAAAAALVCLGLAGCGNNVKGHSYAAADGSVTINFQSSGTAAVTMGPIPVTCTFTQSGKQVNLTCGGQTEVLTVNSDGSLDGPPDTIGHLTKVK*
Ga0070761_105471121	3300005591	Soil	REFKGEKQLKAAKQVKTMMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK*
Ga0070764_100581442	3300005712	Soil	VTDKNLREFKGEKQLKAAKQVKTMMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK*
Ga0070766_104245542	3300005921	Soil	VKAERQVKSMMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK*
Ga0116128_11280501	3300009518	Peatland	MKESKRSGWAAAVVALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0116108_10049233	3300009519	Peatland	VNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK*
Ga0116136_11773801	3300009547	Peatland	MAAAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK*
Ga0116133_10019523	3300009623	Peatland	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK*
Ga0116125_10686291	3300009628	Peatland	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK*
Ga0116102_11403062	3300009632	Peatland	AAVVALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0116112_10559992	3300009636	Peatland	ALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0116112_10784722	3300009636	Peatland	VNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHL
Ga0116118_12595961	3300009637	Peatland	VCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGSIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0116120_11368682	3300009641	Peatland	DGSVTIAFQSSGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK*
Ga0116121_10185873	3300009644	Peatland	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK*
Ga0181539_10892921	3300014151	Bog	MAAAAVLLCLTVAGCGNNVNGHTYGAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK*
Ga0181518_102070901	3300014156	Bog	KESKRSGWAAAVVALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0181517_101180291	3300014160	Bog	MRARTRSGWAATAAALLCLGMAGCGNNVKGHTYTAADSSVTIEFQSGGAANVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK*
Ga0181529_100245036	3300014161	Bog	CGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0181529_102500642	3300014161	Bog	AALLCLGMAGCGNNVKGHTYTAADSSVTIEFQSGGAANVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK*
Ga0181532_100170912	3300014164	Bog	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK*
Ga0181532_101794122	3300014164	Bog	MKVSKRSGWAATAAALVCLGLAGCGNNVKGHTYAAPDGSVTIVFGSGGTANVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0181534_101981942	3300014168	Bog	MAGCGNNVKGHTYTAADSSVTIEFQSGGAANVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK*
Ga0181535_1000045630	3300014199	Bog	MRTVWAATAALVCLVLAGCGSSVKGHTYAAPDGSVTIQFQSGGTANVTMGAIPATCTYTESGKQVNLTCGGQTEILTVAGDGSLDGPQETIGHLTKVK*
Ga0181535_100042537	3300014199	Bog	MRSDIRSGWAATAAALLCLGMAGCGNNVKGHTYTAADSSVTIEFQSGGAANVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK*
Ga0181535_100381912	3300014199	Bog	MRTTNRSGWAAAAVALVCMGLAGCGNNVSGHTYAAADGSVTIVFASGGTANVTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVGDGTLDGPQETVGHLTKVK*
Ga0181535_101444542	3300014199	Bog	MAAVAALVCLGVAGCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK*
Ga0181526_102112052	3300014200	Bog	AVVALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK*
Ga0181537_112452841	3300014201	Bog	KAVVRYGWVAAAAALLCLGAAGCGNNVKGHTYSATDNSVTIEFQSGGTAGISFGPISSTCTYTQNGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK*
Ga0181525_103381031	3300014654	Bog	AALLCLSAVGCGADVKGHTYAAADNSVTIEFQSGGSATVNFGGVPGTCTYTQSGKQVNLTCSGQTEILTVGDGTLDGPQETVGHLTKVK*
Ga0181516_100378762	3300014655	Bog	MRTTNRSGWAAAAVALVCLGLAGCGNNVSGHTYAAADGSVTIVFASGGTANVTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVGDGTLDGPQETVGHLTKVK*
Ga0181516_103325261	3300014655	Bog	AALVCLGVAGCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK*
Ga0181519_109987461	3300014658	Bog	AALVCLVLAGCGSSVKGHTYAAPDGSVTIQFQSGGTANVTMGAIPATCTYTESGKQVNLTCGGQTEILTVAGDGSLDGPQETIGHLMKVK*
Ga0182030_1000842813	3300014838	Bog	MAAAVALLCLAVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYAQSGKQVNLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK*
Ga0182030_110616501	3300014838	Bog	MKESKRSGWAAAVVALVCLSLTGCGNNVKGHTYAAPDGSVTIVFQSGGVASMTIGPIPATCTYTQSGKQVNLTCGGQTEILTVGDGTLDGPQETVGHLTKVK*
Ga0187856_10020823	3300017925	Peatland	VNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187877_10337672	3300017931	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQPGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0187877_11197102	3300017931	Peatland	VRARIRSGWIAAAAALVCLGAVGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187877_13243141	3300017931	Peatland	CLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK
Ga0187848_100462462	3300017935	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0187848_102917011	3300017935	Peatland	GVSGARDGRSSDGGRKVRASLRSGWMAAAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187848_103807991	3300017935	Peatland	GNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK
Ga0187854_100835262	3300017938	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0187854_100986131	3300017938	Peatland	MKESKRSGWAAAVVALVCLSLAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK
Ga0187853_100551931	3300017940	Peatland	NTNGGQKVRARIRSGWIAAAAALVCLGAVGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187853_101432231	3300017940	Peatland	MKESKRSGWAAAVVALVCLSMAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK
Ga0187879_100764432	3300017946	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQPGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0181520_1000395315	3300017988	Bog	MRSDIRSGWAATAAALLCLGMAGCGNNVKGHTYTAADSSVTIEFQSGGAANVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGPLGHLTKVK
Ga0181520_100170427	3300017988	Bog	MTVSMRTVWAATAALVCLVLAGCGSSVKGHTYAAPDGSVTIQFQSGGTANVTMGAIPATCTYTESGKQVNLTCGGQTEILTVAGDGSLDGPQETIGHLTKVK
Ga0181520_102417082	3300017988	Bog	VRARIRSGWIAAAAALVCLGAVGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCAYTQSGKQINLTRGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0181520_102734901	3300017988	Bog	MRSNLRSGVRSGWMAAVAALVCLGVAGCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK
Ga0187891_100176712	3300017996	Peatland	VRASLRSGWMAAAAVLLCLTVAGCGNNVNGHTYGAADGSVTIAFQSDGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187891_11022761	3300017996	Peatland	MAAAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187868_12876761	3300018002	Peatland	NNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187888_10649932	3300018008	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0187866_11951151	3300018015	Peatland	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQPGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0187880_14056732	3300018016	Peatland	VRASLRSGWMAAAAALLCLTVAGCGNNVNGHTYGAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187872_101220512	3300018017	Peatland	VRASLRSGWMAAAAALLCLTVAGCGNNVKGHTYAAPDGSVTIVFQSGGIANMTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVANDGSLDGPQETVGHLTKVK
Ga0187874_100695372	3300018019	Peatland	MRSSIRSGVRGGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0187864_100840402	3300018022	Peatland	VRASLRSGWMAAAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187889_101201201	3300018023	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0187867_102671032	3300018033	Peatland	MKVSKRSGWAATAAALVCLGLAGCGNNVKGHTYAAPDGSVTIVFGSGGTANVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVGSDGSLDGPQETVGHLTKVK
Ga0187867_103792431	3300018033	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAVADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNRDGSLDGPPETIGHLAKVK
Ga0187875_105340442	3300018035	Peatland	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0187862_100642933	3300018040	Peatland	AAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGTAGVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187871_106524631	3300018042	Peatland	AGCGNNVKGHTYAAPDGSVTIVFGSGGTANVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVGSDGSLDGPQETIGHLTKVK
Ga0187887_105585071	3300018043	Peatland	MRSSIRSGMRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETSGHLAKVK
Ga0187852_10842061	3300019082	Peatland	GGRKVRASLRSGWMAAAAALLCLTVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0187852_12059511	3300019082	Peatland	VRASLRSGWMAAAAVLLCLTVAGCGNNVNGHTYGAADGSVTIAFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADNGSLNGPADGAIGHLTKVK
Ga0210388_100147013	3300021181	Soil	VKAERQVKSMMRSGWIAAATALLCLGAVGCGTNVKGHTYAAADNSVTIDFQSGGSATVNFGGIPGTCTYTQSGKQVNLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0210388_102713392	3300021181	Soil	VSELTRPVTVKILREARQVKAARQMKTIVRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGAATVNFGGVPGTCTYTQSGKQINLTCGGQTEALTMADDGSLSGGADSPLGRLTKVK
Ga0210387_103130272	3300021405	Soil	SGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0210391_100677792	3300021433	Soil	LAGPVTDKNLREFKGEKQLKAAKQVKTMMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0224554_10009032	3300023068	Soil	MAAVAALVCLGVAGCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK
Ga0224554_100091513	3300023068	Soil	MRSSVRSGVRSGWMAAAVALLCLAVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYAQSGKQVNLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0224555_10023629	3300023088	Soil	MAAAAALLCLGAAGCGNNVKGHTYQAADDSVTIEFQSGGAASVSFGPIASTCTYTQSGKQINLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK
Ga0224556_10117333	3300024295	Soil	GCGNNVKGHTYAAADNSVTIEFQSGGAAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVASDGSLDGPPETIGHLTKVK
Ga0208035_10744081	3300025406	Peatland	SGVRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0208190_10024832	3300025473	Peatland	VKRSSIRSGVRSGWMAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSGGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTANSDGSLDGPPETIGHLAKVK
Ga0208717_10403622	3300025574	Arctic Peat Soil	VKTLMRSGWVAAAASLLCLSAVGCGSNVKGHTYAAADKSVTIDFQSGGTATVNFGGVPGTCTYAQSGKQVNLTCGGQTEALTVAEDGSLNGPPDGVMGHLTKVK
Ga0208220_10075743	3300025627	Arctic Peat Soil	MRSGWVAAAASLLCLSAVGCGSNVKGHTYAAADKSVTIDFQSGGTATVNFGGVPGTCTYAQSGKQVNLTCGGQTEALTVAEDGSLNGPPDGVMGHLTKVK
Ga0208849_10001243	3300025664	Arctic Peat Soil	MRSGWVAAAAALLCLSAVGCGSNVKGHTYAAADKSVTIDFQSGGAAMVNFGGVPGTCMYAQSGKQVNLTCGGQTEALTMAEDGSLNGAPDGVMGHLTKVK
Ga0209330_11439131	3300027619	Forest Soil	MMRSGWIAAAAALLCLGAVGCGNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0209167_104156601	3300027867	Surface Soil	MRANIVGRCVAAAAALVCLGLAGCGNNVKGHSYAAADGSVTINFQSSGTAAVTMGPIPVTCTFTQSGKQVNLTCGGQTEVLTVNSDGSLDGPPDTIGHLTKVK
Ga0246001_10333352	3300029889	Peat	MAAVAALVCLGVAGCGNNVKGHSYAAADGSVTIAFQSSGTAAVTMGPIPATCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPPETIGHLAKVK
Ga0311371_125939051	3300029951	Palsa	VKAGRQVKAVVRYGWVAAAAALLCLGAVGCGNNVKGHTYSAADNSVTIEFQSGGTAGISFGPISSTCTYTQNGKQINLTCGGQTEALTVADDGSLNGPADGTLGHLTKVK
Ga0265723_10208821	3300030872	Soil	GNNVKGHTYAAADNSVTIDFQSGGSATVNFGGVPGTCTYTQSGKQINLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0265330_1000027716	3300031235	Rhizosphere	MKSNKRSGWAAAVVALVCLGLAGCGNNVKGHTYAAPDGSVTIVFQSGGTANVTMGPIPVTCTYTQSGKQVNLTCGGQTEILTVGDGTLDGPQETVGHLTKVK
Ga0265340_100657432	3300031247	Rhizosphere	MRVSVRSGWIAAAALVCLGAAGCGNNVKGHTYAAAGDTVTIVFQSGGAASVSFGPLTSACTYTQNGKQVSLVCEGDTTALTVADDGSLNGPPDGMLGHLTKVK
Ga0265339_100386822	3300031249	Rhizosphere	VSGHTYAAAGNAVTIVFQSGGAASVSFGPLTSACTYTQSGKQVSLVCEGDTTALTVADDGSLNGPPDGMLGHLTKVK
Ga0265316_103193482	3300031344	Rhizosphere	VRARIRGGWIAAAAALVCLGLAGCGNNVNGHSYAAADGSVTIQFQSGGAASVMMGPIPASCTYTQSGKQVNLTCGGQTEILTVNSDGSLDGPQETIGHLAKVK
Ga0310686_1029468898	3300031708	Soil	MKESKRSGWAAAVVALVCLGLAGCGNNVKGHTYAAADDSVTIVFQSGGTANVSFGPIGSACTYTQSGKQINLTCGGQTEVLTMADDGSLSGPADGPIGHLTKVK
Ga0310686_1045321001	3300031708	Soil	GERQNVQEEKLVKGVRNVKTLMRSGSVAAAAALLCLSAVGCGTNVKGHTYAAADNSVTIDFQSGGAASVNFGGVPGTCTYTQSGKQINLTCGGQTEALTMADDGSLAGGADSPLGHLTKV
Ga0310686_1081382652	3300031708	Soil	VKSMIRSGWLAAAAALLCLGAVGCGTNVKGHTYAAADNSVTIDFQSGGAATVNFGGVPGTCTYTQSGKQVNLTCGGQTEALTMADDGSLSGGADSPLGHLTKVK
Ga0265342_100348522	3300031712	Rhizosphere	MKESKRSGWAAAVVALVCLSLTGCGNNVKGHTYAAPDGSVTIVFQSGGVASMTIGPIPATCTYTQSGKQVNLTCGGQTEILTVGDGTLDGPQETVGHLTKVK
Ga0307474_1000416010	3300031718	Hardwood Forest Soil	MMRSGWIAAATALLCLGAVGCGTNVKGHTYAAADNSVTIDFQSGGSATVNFGGIPGTCTYTQSGKQVNLTCGGQTETLTMADDGSLAGGADSPLGHLTKVK
Ga0335085_100080027	3300032770	Soil	MKVSKRSGWAAAAVALVCLGLAGCGNNVKGHTYAGPDGSVKIEFQSGGTAIVSLGPIASTCTYTQNGKQVNLACEGDTEVLTIASDGSLSGPPEGMLAHLTKVK
Ga0335070_102107542	3300032829	Soil	MRKMRRGWATGVAMACLVLAGCGTNVKGHTYAAPDGSVTIVFQSGGVANMTMGPIPVTCTYTQSGKQVNLTCGGQTEVLTLGSNGALDGPQETIGHLTKVK
Ga0326728_100071494	3300033402	Peat Soil	VKESKQSGWAATAVALVCLGLAGCGNNVKGHTYAAADDSVTIVFQSGGTANVSFGPIASTCTYAQSGKQINLTCGGQTEVLTMADDGSLNGPADGPIGHLTKVK
Ga0326728_102447033	3300033402	Peat Soil	MRASWKRVVAAAALGLVCLGAVGCGNNVKGHTYADADDSVKIAFQSGGTASVSFGPITSTCTFTQNGKQVNLTCGGQTEVLTVADDGSLNGPPDGMLTHLTRVK
Ga0334837_000984_7510_7797	3300033823	Soil	MAAAVALLCLAVAGCGNNVNGHTYAAADGSVTIAFQSGGAASVSFGPIASTCTYAQSGKQVNLTCGGQTEVLTMADDGSLNGPADGAIGHLTKVK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094572

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences