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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F094552 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 106 |
| Average Sequence Length | 66 residues |
| Representative Sequence | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDA |
| Number of Associated Samples | 86 |
| Number of Associated Scaffolds | 106 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 62.86 % |
| % of genes near scaffold ends (potentially truncated) | 31.13 % |
| % of genes from short scaffolds (< 2000 bps) | 78.30 % |
| Associated GOLD sequencing projects | 80 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.17 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (53.774 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (20.755 % of family members) |
| Environment Ontology (ENVO) | Unclassified (36.792 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (52.830 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 17.02% β-sheet: 0.00% Coil/Unstructured: 82.98% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.17 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 106 Family Scaffolds |
|---|---|---|
| PF08241 | Methyltransf_11 | 22.64 |
| PF04542 | Sigma70_r2 | 4.72 |
| PF13489 | Methyltransf_23 | 3.77 |
| PF12543 | DUF3738 | 0.94 |
| PF13676 | TIR_2 | 0.94 |
| PF01152 | Bac_globin | 0.94 |
| PF13302 | Acetyltransf_3 | 0.94 |
| PF03449 | GreA_GreB_N | 0.94 |
| PF14622 | Ribonucleas_3_3 | 0.94 |
| PF13649 | Methyltransf_25 | 0.94 |
| COG ID | Name | Functional Category | % Frequency in 106 Family Scaffolds |
|---|---|---|---|
| COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 4.72 |
| COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 4.72 |
| COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 4.72 |
| COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 4.72 |
| COG0782 | Transcription elongation factor, GreA/GreB family | Transcription [K] | 0.94 |
| COG2346 | Truncated hemoglobin YjbI | Inorganic ion transport and metabolism [P] | 0.94 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 53.77 % |
| Unclassified | root | N/A | 46.23 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 20.75% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 15.09% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 11.32% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 5.66% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.72% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.77% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.83% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.83% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 2.83% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.89% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.89% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.89% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.94% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.94% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.94% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.94% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.94% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.94% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.94% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 0.94% |
| Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.94% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.94% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.94% |
| Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.94% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.94% |
| Visualization |
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| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
| 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
| 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
| 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
| 3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009610 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 | Environmental | Open in IMG/M |
| 3300009678 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 | Environmental | Open in IMG/M |
| 3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011333 | Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011417 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2 | Environmental | Open in IMG/M |
| 3300012505 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610 | Host-Associated | Open in IMG/M |
| 3300012511 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10 | Environmental | Open in IMG/M |
| 3300012906 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1 | Environmental | Open in IMG/M |
| 3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015200 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Host-Associated | Open in IMG/M |
| 3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
| 3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
| 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027907 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
| 3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
| 3300031198 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S | Environmental | Open in IMG/M |
| 3300031226 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S | Environmental | Open in IMG/M |
| 3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
| 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Host-Associated | Open in IMG/M |
| 3300031562 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3 | Environmental | Open in IMG/M |
| 3300031847 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4 | Environmental | Open in IMG/M |
| 3300031892 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2 | Environmental | Open in IMG/M |
| 3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
| 3300031913 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300032012 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032017 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4 | Environmental | Open in IMG/M |
| 3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
| 3300032144 | Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil | Environmental | Open in IMG/M |
| 3300032157 | Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil | Environmental | Open in IMG/M |
| 3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
| 3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034148 | Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17 | Environmental | Open in IMG/M |
| 3300034661 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034819 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 | Host-Associated | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiDRAFT_08251963 | 3300000033 | Soil | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA* |
| JGI10216J12902_1027241242 | 3300000956 | Soil | MATNQNPDQEKNRNRHTQNPPPTDPDQRQREKPMDDPGRGQGDKFEKHLPGNEKDQEPRSSRDA* |
| F14TB_1029092231 | 3300001431 | Soil | METAMPTNQXXXXERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRS |
| Ga0063356_1004663612 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MPTTQNPNHERNRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKDQEPDSKPGRGV* |
| Ga0063356_1024964682 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MAVNQNPNQERETNRHTQNPPPTDPGQPHHDRPMDDPGRGHGDKFERQLPGQDSEPDADKPR* |
| Ga0062595_1002456392 | 3300004479 | Soil | MATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA* |
| Ga0062592_1024642832 | 3300004480 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQD |
| Ga0065714_104289711 | 3300005288 | Miscanthus Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0065712_100267952 | 3300005290 | Miscanthus Rhizosphere | QNPDQERDRNRHTQNPPPTDPKQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0065705_107047812 | 3300005294 | Switchgrass Rhizosphere | MPTTQNPNQERDRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKDHEPESKPPRDV* |
| Ga0070676_101530982 | 3300005328 | Miscanthus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0070673_1002574073 | 3300005364 | Switchgrass Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0070678_1003103351 | 3300005456 | Miscanthus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQ |
| Ga0070684_1014533991 | 3300005535 | Corn Rhizosphere | MATNQNPDQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA* |
| Ga0068859_1008753181 | 3300005617 | Switchgrass Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRRQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0068860_1019234242 | 3300005843 | Switchgrass Rhizosphere | PTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0075432_100288492 | 3300006058 | Populus Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKLEKHLPGNEEIRSRARSRATHSLRIE* |
| Ga0075428_1000773395 | 3300006844 | Populus Rhizosphere | MATNQNPNQERDRNRHTQNPPPTNPNQRDQDRPMDDPGRGHGDKFEKHLPGNEKDQEPRSKPGRDA* |
| Ga0075428_1008234381 | 3300006844 | Populus Rhizosphere | MATNQNPNQERDRNRHTQNPPPTDPDQRNRERPMDDPGRGQGDKFEKKLPGNEKDQDERVRSPRDS* |
| Ga0075428_1009825201 | 3300006844 | Populus Rhizosphere | MPTTQNPNQERDRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEENHESESKPPRDV* |
| Ga0075430_1005847002 | 3300006846 | Populus Rhizosphere | MPTTQNPNQERDKNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKNHEPESKPPRDV* |
| Ga0068865_1001964162 | 3300006881 | Miscanthus Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPKQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0075419_100195875 | 3300006969 | Populus Rhizosphere | MATNQNPDQERDRNRHTQNPPPTNPNQRDQDRPMDDPGRGHGDKFEKHLPGNEKDQEPRSKPGRDA* |
| Ga0111539_102308173 | 3300009094 | Populus Rhizosphere | MAEARRNTMAVNQNPNQERETNRHTQNPPPTDPGQPHHDRPMDDPGRGHGDKFERQLPGQDSEPDADKPR* |
| Ga0105243_115043661 | 3300009148 | Miscanthus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDAGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0111538_102834761 | 3300009156 | Populus Rhizosphere | WTRPNGRVATETTMPNTQNPDQERDRNRHSQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSSRDA* |
| Ga0111538_108692052 | 3300009156 | Populus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE* |
| Ga0105340_10232954 | 3300009610 | Soil | NRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE* |
| Ga0105252_101143122 | 3300009678 | Soil | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA* |
| Ga0126317_102757212 | 3300011332 | Soil | AMETTMPTNQNPDQERNKDRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0127502_101852582 | 3300011333 | Soil | METTMPTNQNPDQERDRNRHTQDPPPTDPNQPNRERPMDDPGRGQGDKFEEKLPGNEKDQDPRFRSSRDE* |
| Ga0137326_10978782 | 3300011417 | Soil | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSRDE* |
| Ga0157339_10674191 | 3300012505 | Arabidopsis Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA* |
| Ga0157332_10004871 | 3300012511 | Soil | AVNQNPNQERETNRHTQNPPPTHPIQRDGDRPMDDPGRGHGDKFEKHLPGNEKDQEPRSKPRDA* |
| Ga0157295_103300221 | 3300012906 | Soil | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGKEKDQDSRFRSPRDE* |
| Ga0157306_101552781 | 3300012912 | Soil | RPNGRVATETTMPTTQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE* |
| Ga0163162_108354341 | 3300013306 | Switchgrass Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0157375_104056403 | 3300013308 | Miscanthus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDA* |
| Ga0157375_134425871 | 3300013308 | Miscanthus Rhizosphere | AARRQETTMATNQNPNQEQDRNRHTQNPPPTDPIQRHGGRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA* |
| Ga0157375_135180811 | 3300013308 | Miscanthus Rhizosphere | RRQETTMATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA* |
| Ga0157380_132906811 | 3300014326 | Switchgrass Rhizosphere | METTMPTNQNPDKERDRNRHTQNPPPTDPNQPDRERPMDDPGRGQGDKFEKKLPGNEKEQESRFRSSRD |
| Ga0157377_106677822 | 3300014745 | Miscanthus Rhizosphere | NPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0157376_114580361 | 3300014969 | Miscanthus Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPKQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE* |
| Ga0173480_100348443 | 3300015200 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE* |
| Ga0132258_129596972 | 3300015371 | Arabidopsis Rhizosphere | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSRDA* |
| Ga0163161_102810253 | 3300017792 | Switchgrass Rhizosphere | RGAARRQETTMATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA |
| Ga0184611_11253392 | 3300018067 | Groundwater Sediment | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0184624_100075375 | 3300018073 | Groundwater Sediment | MPTNQNPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0184628_103011292 | 3300018083 | Groundwater Sediment | MATNQNPDQEQDRNRHTQNPPPTDQRHREKPMDDPGRGQGDKFEKQLPGNEKDQEPRSSRDA |
| Ga0184628_104754531 | 3300018083 | Groundwater Sediment | TTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0190270_106447192 | 3300018469 | Soil | MPTNQNPDKERDRNRHTQNPPPTDPNQPDRERPMDDPGRGQGDKFEKKLPGNEKDQESRFRSSRDA |
| Ga0190274_110394092 | 3300018476 | Soil | MPTNENPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0190274_138068781 | 3300018476 | Soil | MAVNQNPDQENERNRHTQNPPPTDPNQPSHERPMDDPGRGHGDKLERQLPGHDRPDAGQS |
| Ga0190271_103157411 | 3300018481 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE |
| Ga0190271_118846602 | 3300018481 | Soil | MAVNQNPTQERDRNRHTQNPPPTDPDQRERERPMDDPGRGHGDKLERHLPGNEEDQEPCSKPTRGE |
| Ga0210380_103368843 | 3300021082 | Groundwater Sediment | MPTNQNPDKERDRNRHTQNPPPTDPNQPDRERPMDDPGRGQGDKFEKKLPGNEKDQESRFRSS |
| Ga0207697_100007394 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA |
| Ga0207682_100061813 | 3300025893 | Miscanthus Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA |
| Ga0207680_100449941 | 3300025903 | Switchgrass Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKVQDPR |
| Ga0207645_1000179719 | 3300025907 | Miscanthus Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEKDQEPRSKPRDA |
| Ga0207645_103635782 | 3300025907 | Miscanthus Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRF |
| Ga0207701_109509362 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MPTTQNPNHERNRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKDQEPDSKPGRGV |
| Ga0207669_101753132 | 3300025937 | Miscanthus Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDA |
| Ga0207669_108232101 | 3300025937 | Miscanthus Rhizosphere | MPTNQNPDKERDRNRHTQNPPPTDPNQPDRERPMDDPGRGQGDKLEKKLPGNEKDQDPRFRSSRDA |
| Ga0207679_122007511 | 3300025945 | Corn Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPKQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0207651_102819483 | 3300025960 | Switchgrass Rhizosphere | NGRVAMETTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0207641_116717442 | 3300026088 | Switchgrass Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRF |
| Ga0207674_103108213 | 3300026116 | Corn Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA |
| Ga0207674_109735221 | 3300026116 | Corn Rhizosphere | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSRDA |
| Ga0207683_100122348 | 3300026121 | Miscanthus Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDGDRPMDDPGRGQGDKYEKHLPGNEKDQEPRSKPRDA |
| Ga0209983_11454311 | 3300027665 | Arabidopsis Thaliana Rhizosphere | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDKFEKHLPGNEEDQEP |
| Ga0209481_107723442 | 3300027880 | Populus Rhizosphere | MPTTQNPNQERDRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEENHESESKPPRDV |
| Ga0207428_108038772 | 3300027907 | Populus Rhizosphere | MPNTQNPDQERDRNRHSQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSSRDA |
| Ga0209382_1000104345 | 3300027909 | Populus Rhizosphere | MATNQNPNQERDRNRHTQNPPPTNPNQRDQDRPMDDPGRGHGDKFEKHLPGNEKDQEPRSKPGRDA |
| Ga0247822_106352561 | 3300028592 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA |
| Ga0247825_1000028938 | 3300028812 | Soil | MPTNQNPDQERDRNRHRQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSSRDA |
| Ga0247825_106277942 | 3300028812 | Soil | METTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA |
| Ga0307500_102683781 | 3300031198 | Soil | MATNQNPDQERDRNRHTQNPPPTDPDQRHREKPMDDPGRGQGDKLEKHLPGNENDQESGTRSSRDS |
| Ga0307497_100051176 | 3300031226 | Soil | PDQERDRNRHTQNPPPTDSNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSSRDA |
| Ga0310888_100634572 | 3300031538 | Soil | MATNQNPNQEQDRNRHTQNPPPTDPIQQDRGRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA |
| Ga0307408_1006560663 | 3300031548 | Rhizosphere | MAENRNPNQERDRARHSQNPPPTDPNQRPQERPMDDPGRGHGDKFEKQLPGNEDDQDSRARPTRDV |
| Ga0310886_100524672 | 3300031562 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFQSSRDE |
| Ga0310907_101243672 | 3300031847 | Soil | METTMPTNQNPDQERDRNRRTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA |
| Ga0310893_101874082 | 3300031892 | Soil | NGRVAMETTMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE |
| Ga0310893_106091262 | 3300031892 | Soil | EAGNAAELQEGTMPTTQNPNHERNRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKDQEPDSKPGRGV |
| Ga0310900_103034741 | 3300031908 | Soil | QNPNHERNRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNEKDQEPDSKPGRGV |
| Ga0310900_114790842 | 3300031908 | Soil | MPTTQNPNHERNRNRHTQNPPPTDPNQRHQERPMDDPGRGHGDKFEKHLPGNE |
| Ga0310891_101078092 | 3300031913 | Soil | ERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0310884_101398842 | 3300031944 | Soil | MPTNQNPDRERDRNRHTQNPPPTDPDQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFQSSRDE |
| Ga0310884_105540802 | 3300031944 | Soil | TKQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA |
| Ga0310902_100123926 | 3300032012 | Soil | MATNQNPNQEQDRNRHTQNPPPTDPIQRDRGRPMDDPGRGQGDRFEKHLPGNEEDQEPRSKPRDA |
| Ga0310902_100389633 | 3300032012 | Soil | MPTNQNPDRERDRNRHTQNPPPTDPDQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSREA |
| Ga0310906_104025761 | 3300032013 | Soil | RVATETTMPTNQNPDRERDRNRHTQNPPPTDPDQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFQSSRDE |
| Ga0310899_100144385 | 3300032017 | Soil | MAPNQNPNQEQDRNRHTQNPPPTHPIQRDGDRPMDDPGRGHGDKFEKHLPGNEKDQEPRSKPRDA |
| Ga0310895_107533302 | 3300032122 | Soil | TMPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSPRDE |
| Ga0315910_102033403 | 3300032144 | Soil | MATTQNPNQERDRSRHTQNPPPTDPDQRHRERPMDDPGRGQGDKFEEHLPGNEENQDEPRVRSPRES |
| Ga0315910_103584751 | 3300032144 | Soil | INQNPDQERDRNRHTQNPPPTDPDQRHRERPMDDPGRGQGDKFEKHLPGNEEDQEPRGRSSRDS |
| Ga0315912_1000196613 | 3300032157 | Soil | MPTNQNPDQDQNRDRHTQNPPPTDPNQREREKPMDDPGRGQGDKFEKQLPGNDKNQEPRSSRDA |
| Ga0315912_106288322 | 3300032157 | Soil | MATNQNPNQEQDRNRHTQNPPPTDPDQRRRESPMDDPGRGQGDKFEKKLPGNEKDQEPRSSRDA |
| Ga0315912_110802112 | 3300032157 | Soil | METTMAINKNPDQEKDRNRHTQNPPPTDPNQPDSGRPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSRDA |
| Ga0310889_100205071 | 3300032179 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRPSRDE |
| Ga0310896_103890461 | 3300032211 | Soil | PDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0247830_108300841 | 3300033551 | Soil | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFQSPRDE |
| Ga0364927_0005452_1345_1545 | 3300034148 | Sediment | MPTNQNPDQERDRNRHTQNPPPTDPNQPNRERPMDDPGRGQGDKFEKKLPGNEKDQDPRFRSSRDE |
| Ga0314782_190059_1_189 | 3300034661 | Soil | QNPDQERDRNRHTQNPPPTDPNQPNREQPMDDPGRGQGDKFEKKLPGNEKDQDSRFRSPRDE |
| Ga0373958_0029448_81_278 | 3300034819 | Rhizosphere Soil | MATNQNPNQEQDRNRHTQNPPPTDPIQRGRGRPMDDPGRGQGDKFEKHLPGNEEDQEPRSKPRDA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |