Metagenome Family F094527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094527
Family Type	Metagenome
Number of Sequences	106
Average Sequence Length	88 residues
Representative Sequence	ARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Number of Associated Samples	78
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.06 %
% of genes from short scaffolds (< 2000 bps)	89.62 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (97.170 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (49.057 % of family members)
Environment Ontology (ENVO)	Unclassified (85.849 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.057 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148. 1JGI24006J15134_102275041 2GBIDBA_1001525912 3Ga0066851_101205791 4Ga0066866_101089151 5Ga0066831_100698843 6Ga0066862_100275841 7Ga0066862_100851963 8Ga0098058_10064141 9Ga0098044_11426591 10Ga0070749_104053541 11Ga0075481_101554333 12Ga0098041_12891761 13Ga0075468_100748733 14Ga0070753_11498601 15Ga0099848_10807274 16Ga0099850_12372171 17Ga0115652_10734983 18Ga0115651_10705798 19Ga0098049_11848021 20Ga0098061_11512003 21Ga0098061_12745383 22Ga0129342_11221544 23Ga0180120_102554672 24Ga0180120_103770452 25Ga0181367_10572332 26Ga0181372_10142191 27Ga0181372_10512623 28Ga0181412_10764793 29Ga0181404_10558463 30Ga0181390_10118539 31Ga0181390_10448851 32Ga0181390_11102413 33Ga0181383_10132111 34Ga0181383_10551221 35Ga0181383_11449971 36Ga0181373_10720392 37Ga0181388_11757811 38Ga0181398_10060371 39Ga0181398_10904271 40Ga0181419_10409051 41Ga0181419_10410994 42Ga0181396_10999851 43Ga0181416_10553861 44Ga0181416_11247403 45Ga0181415_10190936 46Ga0181415_11438512 47Ga0181431_11257931 48Ga0181428_10801401 49Ga0181428_11729081 50Ga0181421_10618614 51Ga0181421_10894763 52Ga0181399_10386451 53Ga0181399_10973931 54Ga0181402_10306381 55Ga0181402_10678794 56Ga0181402_11637781 57Ga0181397_10340454 58Ga0181397_11016051 59Ga0181427_11813461 60Ga0181393_10623701 61Ga0181405_10197445 62Ga0181405_10601193 63Ga0181405_10724863 64Ga0187219_11686631 65Ga0181400_12007402 66Ga0181407_11079003 67Ga0181411_10183657 68Ga0181409_10206791 69Ga0181409_11589803 70Ga0181408_10486741 71Ga0181408_11108971 72Ga0181410_11512972 73Ga0181385_10540131 74Ga0181385_12613021 75Ga0181385_12726942 76Ga0187220_10245026 77Ga0187221_11917352 78Ga0181386_10322296 79Ga0181423_13808792 80Ga0181380_11217151 81Ga0181580_108867361 82Ga0181590_108449251 83Ga0181579_101880121 84Ga0181579_105666252 85Ga0181591_110042162 86Ga0181566_103841853 87Ga0181573_101374211 88Ga0181573_103096091 89Ga0211618_101153061 90Ga0211636_101196784 91Ga0211523_103946632 92Ga0211576_104119301 93Ga0255767_10820696 94Ga0255761_103363182 95Ga0255777_103537712 96Ga0208011_10356691 97Ga0209756_10587951 98Ga0209756_12116403 99Ga0208795_11483642 100Ga0208645_11324492 101Ga0208407_10793781 102Ga0207992_10151961 103Ga0207992_10649081 104Ga0209036_12240321 105Ga0135226_10364701 106Ga0183748_11006633
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148. 1JGI24006J15134_102275041 2Ga0066866_101089151 3Ga0066862_100851963 4Ga0098058_10064141 5Ga0070749_104053541 6Ga0075481_101554333 7Ga0075468_100748733 8Ga0099850_12372171 9Ga0180120_102554672 10Ga0180120_103770452 11Ga0181372_10142191 12Ga0181398_10904271 13Ga0181408_10486741 14Ga0181580_108867361 15Ga0181579_105666252 16Ga0211618_101153061 17Ga0135226_10364701
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148. 1JGI24006J15134_102275041 2Ga0066866_101089151 3Ga0066862_100851963 4Ga0098058_10064141 5Ga0070749_104053541 6Ga0075481_101554333 7Ga0075468_100748733 8Ga0099850_12372171 9Ga0180120_102554672 10Ga0180120_103770452 11Ga0181372_10142191 12Ga0181398_10904271 13Ga0181408_10486741 14Ga0181580_108867361 15Ga0181579_105666252 16Ga0211618_101153061 17Ga0135226_10364701
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 13.10% Coil/Unstructured: 53.57%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF00579	tRNA-synt_1b	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0162	Tyrosyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.94
COG0180	Tryptophanyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.94

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	2.83 %
Unclassified	root	N/A	97.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.17 %
Viruses	superkingdom	All Organisms → Viruses	2.83 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.83 %
Unclassified	root	N/A	97.17 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001450\|JGI24006J15134_10227504	Not Available	550	Open in IMG/M
3300001683\|GBIDBA_10015259	Not Available	3920	Open in IMG/M
3300005427\|Ga0066851_10120579	Not Available	845	Open in IMG/M
3300005514\|Ga0066866_10108915	Not Available	1009	Open in IMG/M
3300005516\|Ga0066831_10069884	Not Available	949	Open in IMG/M
3300005521\|Ga0066862_10027584	Not Available	2073	Open in IMG/M
3300005521\|Ga0066862_10085196	Not Available	1087	Open in IMG/M
3300006750\|Ga0098058_1006414	Not Available	3583	Open in IMG/M
3300006754\|Ga0098044_1142659	Not Available	963	Open in IMG/M
3300006802\|Ga0070749_10405354	Not Available	752	Open in IMG/M

Showing 1 to 10 of 105 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	12.26%
Harbor	Environmental → Aquatic → Marine → Harbor	0.94%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	10.38%
Oceanic	Environmental → Aquatic → Marine → Oceanic	21.70%
Strait	Environmental → Aquatic → Marine → Strait	49.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.72%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	10.38%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	49.06%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	21.70%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.94%
Unclassified	Environmental → Aquatic → Marine → Harbor → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.55%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.83%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.70%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.72%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.89%
Marine Harbor	Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor	0.94%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	10.38%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	49.06%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005516	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF49B	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 78 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24006J15134_102275041	3300001450	Marine	RAINADVEASREDILWSLKQLEKQGMAKQVGIKAKVMSDDQRGSYKVPVVVPVAEVNNFQRRWVHTIEAAPAQDDSAK*
GBIDBA_1001525912	3300001683	Hydrothermal Vent Plume	AACARAINADVEASREDILWSLKQLEKQGLARQVGIKAKVFSDDQRGSYKVPVVVDVSEVNNFQRRWVHTIEATPAQDDSAE*
Ga0066851_101205791	3300005427	Marine	ANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0066866_101089151	3300005514	Marine	REDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0066831_100698843	3300005516	Marine	RQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0066862_100275841	3300005521	Marine	AINASVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0066862_100851963	3300005521	Marine	GQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0098058_10064141	3300006750	Marine	TKVQASREDILWSLKQLEKQGLASQVGIKSKEEDDKKFMVVVPVAEVNNFQRRWVHTIEAAAAQDDSAE*
Ga0098044_11426591	3300006754	Marine	TEFFASPVGQSTKFFSIKPTSGMFAACARAINASVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0070749_104053541	3300006802	Aqueous	LKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQDVSAE*
Ga0075481_101554333	3300006868	Aqueous	MFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQDVSAE*
Ga0098041_12891761	3300006928	Marine	NVEASREDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAEDAPAQDGSAE*
Ga0075468_100748733	3300007229	Aqueous	RQIGIKGEVVADDRGIDIKRMIIVELITGNEVNNFQRRWVHSIEAVPAQDDSAE*
Ga0070753_11498601	3300007346	Aqueous	TAFFASPQGQKAKFFSVKPTSGMFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQDVSAE*
Ga0099848_10807274	3300007541	Aqueous	KPTSGMFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEVVEAPAQADSAE*
Ga0099850_12372171	3300007960	Aqueous	KAEKAAKAGATKSRRQDVLSDVTAFFASPQGQKAKFFSVKPTSGMFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQADSAE*
Ga0115652_10734983	3300008624	Marine	SPIGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAEIIANDRGVDIKRPKVVDVSEVNNFQRRWVHSIEAAPAQDESAE*
Ga0115651_10705798	3300008952	Marine	KFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAEIIANDRGVDIKRPKVVDVSEVNNFQRRWVHSIEAAPAQDESAE*
Ga0098049_11848021	3300010149	Marine	QNAKFFSVKPTSGMFAACALAINTKVEASREDILWSLKQLEKSGLASQVGIKSKEEDGKKFMVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDGSAE*
Ga0098061_11512003	3300010151	Marine	REDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNYQRRWVHTIEAAPAEDAPAQDDSAE*
Ga0098061_12745383	3300010151	Marine	REDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAVPAEDAPVQDDSAE*
Ga0129342_11221544	3300010299	Freshwater To Marine Saline Gradient	LKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQADSAE*
Ga0180120_102554672	3300017697	Freshwater To Marine Saline Gradient	YTSKADKAAKAGATKARRQGVLSEVTEYFASPAGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAEIVSNELGIDIKRPKVVDVSEVNNFQRRWVHSIEAVPAQDDSAE
Ga0180120_103770452	3300017697	Freshwater To Marine Saline Gradient	INTKVEASREDILWSLKQLEKNGLARQIGIKGEVVADDRGIDIKRMIIVELITGNEVNNFQRRWVHTIEAAPAQDDSAE
Ga0181367_10572332	3300017703	Marine	ACARAINANVEASREDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAAAQDDSAE
Ga0181372_10142191	3300017705	Marine	KARRQGVLSEVTEFFASPVGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAQDDSAE
Ga0181372_10512623	3300017705	Marine	LEKQGLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181412_10764793	3300017714	Seawater	GQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181404_10558463	3300017717	Seawater	ANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181390_10118539	3300017719	Seawater	AINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181390_10448851	3300017719	Seawater	EASREDILWSLKQLEKLGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0181390_11102413	3300017719	Seawater	FASPVGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181383_10132111	3300017720	Seawater	LWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181383_10551221	3300017720	Seawater	AACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEAAPAEDAPVQDDSAE
Ga0181383_11449971	3300017720	Seawater	IGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181373_10720392	3300017721	Marine	KPTSGMFAACALAINTKVQASREDILWSLKQLEKTGLASQVGIKSKEEDGKKFMVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181388_11757811	3300017724	Seawater	RAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181398_10060371	3300017725	Seawater	QGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181398_10904271	3300017725	Seawater	QGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181419_10409051	3300017728	Seawater	TKFFSIKPTAGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181419_10410994	3300017728	Seawater	TSKADKADKAAANKARRQGGLSEVTEFFASPVGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPSEDDSAK
Ga0181396_10999851	3300017729	Seawater	ILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181416_10553861	3300017731	Seawater	RAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181416_11247403	3300017731	Seawater	RAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181415_10190936	3300017732	Seawater	ARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181415_11438512	3300017732	Seawater	WSLKQLEKQGLARQVGIKAKVISDDQRGSYKVPVVVPVAEVNNFQRRWVHTIEAAPAQDDSSK
Ga0181431_11257931	3300017735	Seawater	ILWSLKQLEKLGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181428_10801401	3300017738	Seawater	KFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181428_11729081	3300017738	Seawater	TSGMFAACAMAINTKVEASREDILWSLKQLEKLGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0181421_10618614	3300017741	Seawater	SIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181421_10894763	3300017741	Seawater	SPIGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181399_10386451	3300017742	Seawater	GLARQVGIKAKVISDDQRGSYKIPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0181399_10973931	3300017742	Seawater	GMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181402_10306381	3300017743	Seawater	QGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181402_10678794	3300017743	Seawater	RAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181402_11637781	3300017743	Seawater	RAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEAAPAQDDSSK
Ga0181397_10340454	3300017744	Seawater	EASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181397_11016051	3300017744	Seawater	VEASRDDILWSLKQLEKQGLASQVGIKSKEEDGKKFMAVVPVAEVNNFQRRWIHTIEATPAQDDSSK
Ga0181427_11813461	3300017745	Seawater	IGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVLEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181393_10623701	3300017748	Seawater	PIGQSTKFFSIKPTSGMFAASARAINADVEASREDILWSLKQLEKQGMAKQVGIKAKVMSDDQRGSYKVPVVVPVAEVNNFQRRWIHTIEATPAQDDSSK
Ga0181405_10197445	3300017750	Seawater	LWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181405_10601193	3300017750	Seawater	EASREDILWSLKQLEKQGLARQVGIKAKVSSEDQRGPYKVPVVVPVAEVNNFQRRWVHTIEAAPAEDAAAQDDSAE
Ga0181405_10724863	3300017750	Seawater	KFFSIKPTAGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0187219_11686631	3300017751	Seawater	EASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181400_12007402	3300017752	Seawater	RQDVLTEVTAFFASPIGQTTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGMAKQVGIKAKVMSDDQRGSYKVPVVVPVAEVNNFQRRWVHTIEAAPAEDAPAQDAPAQDDSAE
Ga0181407_11079003	3300017753	Seawater	VEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181411_10183657	3300017755	Seawater	ATKARRQGVLSEVTEFFASPVGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181409_10206791	3300017758	Seawater	KARRQGVLSEVTEFFASPVGQSTKFFSIKPTAGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181409_11589803	3300017758	Seawater	RNILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181408_10486741	3300017760	Seawater	GLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTVEAAPAEDAPAQDDSAE
Ga0181408_11108971	3300017760	Seawater	GLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAQDDSSK
Ga0181410_11512972	3300017763	Seawater	GATKARRQDVLTEVTAFFASPIGQTTQFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDDSAK
Ga0181385_10540131	3300017764	Seawater	NVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181385_12613021	3300017764	Seawater	EFFASPIGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGSYKIPVVVDVSEVNNFQRRWVHTIEAVPAEDAPAQDDSAE
Ga0181385_12726942	3300017764	Seawater	AINTKVQASREDILWSLKQLEKQGLASQVGIKSKEEDGKKFMAVVPVAEVNNFQRRWVHTIEAAPAQDDSSK
Ga0187220_10245026	3300017768	Seawater	CARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0187221_11917352	3300017769	Seawater	TEVTAFFASPIGQTTQFFSIKPTSGMFAASARAINADVEASREDILWSLKQLEKQGMAKQVGIKAKVMSDDQRGSYKVPVVVPVAEVNNFQRRWVHTIEAAPAQDDSSK
Ga0181386_10322296	3300017773	Seawater	GVLSEVTEFFASPIGQSTKFFSIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLARQVGIKAKVISDDQRGPYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0181423_13808792	3300017781	Seawater	SIKPTSGMFAACARAINANVEASREDILWSLKQLEKQGLASQVGIKSKEEDGKKFMVVVPVAEVNNFQRRWVHTIEAVPAEDAPAQDGSAE
Ga0181380_11217151	3300017782	Seawater	LEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEASPAEDAPVQDDSAE
Ga0181580_108867361	3300017956	Salt Marsh	KQLEKKGLAKQVGIKGKIVGEDRGLPKKVMVIVPVAEVNNFQRRWVHSIEAAPAEDAPAGDDSAE
Ga0181590_108449251	3300017967	Salt Marsh	DRAAKAGATKARRQAVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACAVAINQNVEASREDILWSLKQLEKQGLAKQVGIKGEVVGENRGLPVKRMIIVPVSEVNNFQRRWVHNIEAAPAEDAPAQDDSAE
Ga0181579_101880121	3300018039	Salt Marsh	AVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACAVAINQNVEASREDILWSLKQLEKQGLAKQVGIKGEVVGENRGLPVKRMIIVPVSEVNNFQRRWVHNIEAAPAEDAPAQDDSAE
Ga0181579_105666252	3300018039	Salt Marsh	SEVTEFFASPRGQKAKFFSVKPTSGMFAACATAINMHVDATREDILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0181591_110042162	3300018424	Salt Marsh	DKADRAAKAGATKARRQAVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACATAINMHVNATREDILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAPAQDDSAE
Ga0181566_103841853	3300018426	Salt Marsh	GATKARRQAVLADVTEFFASPRGQKAKFFSVKPTSGMFAACAVAINQNVEASREDILWSLKQLEKQGLAKQVGIKGEIVGENRGLPVKRMIIVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0181573_101374211	3300020184	Salt Marsh	RGQKAKFFSVKPTSGMFAACATAINMHVNATREDILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0181573_103096091	3300020184	Salt Marsh	LKQLEKQGLAKQVGIKGEVVGENRGLPVKRMIIVPVSEVNNFQRRWVHNIEAAPAEDAPAQDDSAE
Ga0211618_101153061	3300020393	Marine	RAAKAGATKARRQAVLADVTEFFASPRGQKAKFFSVKPTSGMFAACAVAINQNVEASREDILWSLKQLEKKGLAKQVGIKGKVVGEDRGIEKKVMVIVPVSEVNNFQRRWVHSIEAAPAKDAPAE
Ga0211636_101196784	3300020400	Marine	ACATAINMHVEATREDILWSLKQLEKKGLAKQVGITSKIENDKKFMVVVPVAEVNNFQRRWVHSIEAAPAADAPAQDDSAE
Ga0211523_103946632	3300020414	Marine	AKAGATKARRQAVLADVTEFFASPRGQKAKFFSVKPTSGMFAACAVAINQNVEASREDILWSLKQLEKQGLAKQVGIKGKVVGEDRGIEKKVMVIVPVSEVNNFQRRWVHSIEAAPAEEAPAQDDSAE
Ga0211576_104119301	3300020438	Marine	GMFAASARAINADVEASREDILWSLKQLEKQGMAKQVGIKAKVMSDDQRGSYKVPVVVPVAEVNNFQRRWVHTIEAAPAQDDSAK
Ga0255767_10820696	3300022914	Salt Marsh	KARRQAVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACATAINMHVNATREDILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0255761_103363182	3300023170	Salt Marsh	AVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACATAINMHVEASREDILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAPAQDDSAE
Ga0255777_103537712	3300023175	Salt Marsh	QAVLSEVTEFFASPRGQKAKFFSVKPTSGMFAACATAINMHVDATREDILWSLKQLEKQGLAKQVGIKGEIVGENRGLPVKRMIIVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE
Ga0208011_10356691	3300025096	Marine	LEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0209756_10587951	3300025141	Marine	SLKQLEKQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0209756_12116403	3300025141	Marine	LKQLEKQGLARQVGIKAKVISDDQRGAYKVPVVVDVSEVNNFQRRWVHSIEASPVQDDSA
Ga0208795_11483642	3300025655	Aqueous	AEKAAKAGATKSRRQDVLSDVTAFFASPQGQKAKFFSVKPTSGMFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQADSAE
Ga0208645_11324492	3300025853	Aqueous	VKPTSGMFAACATAINMHVEATREDILWSLKQLEKQGLARQVGITSREEDGKKFMAVVPVEEVNNFQRRWVHSIEAAPAEDAPAQDVSAE
Ga0208407_10793781	3300026257	Marine	ARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEASPAEDAPAQDDSAE
Ga0207992_10151961	3300026263	Marine	KQGLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEASPAEDAAAQDDSA
Ga0207992_10649081	3300026263	Marine	GLARQVGIKGEVVADDRGIDIKRMIVVPVSEVNNFQRRWVHTIEAAPAEDAPAQDDSAE
Ga0209036_12240321	3300027702	Marine	DILWSLKQLEKKGLAKQVGIRGEIVGEDRGLPKKVMVVVPVSEVNNFQRRWVHSIEAAAAEDAPAQDDSAE
Ga0135226_10364701	3300029308	Marine Harbor	QRTDCFPVTITKARRQAVLDEVTAFFGSVRGQTIKFYSIKPTSGSFAAKALAINQFVEASREDILWSLKQLEKKGLARQVGIKSETNDDGDKYPVVVDVSQVNNFQRRWVHSVEPARAQDEDAQDEATPAAE
Ga0183748_11006633	3300029319	Marine	SGMFAACAVAINQNVEASREDILWSLKQLEKKGLAKQVGIKGKVVGEDRGIEKKVMVIVPVSEVNNFQRRWVHSIEAAPAEDAPAQDDSAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094527

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences