NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F094517

Metagenome Family F094517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094517
Family Type Metagenome
Number of Sequences 106
Average Sequence Length 49 residues
Representative Sequence YIYIYIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIRGLKG
Number of Associated Samples 8
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 9.43 %
% of genes from short scaffolds (< 2000 bps) 6.60 %
Associated GOLD sequencing projects 6
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (96.226 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut
(99.057 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Animal → Animal proximal gut
(100.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.67%    β-sheet: 0.00%    Coil/Unstructured: 53.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF10255Paf67 0.94



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A96.23 %
All OrganismsrootAll Organisms3.77 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001542|JGI20167J15610_10070184Not Available543Open in IMG/M
3300002238|JGI20169J29049_10785235Not Available663Open in IMG/M
3300002308|JGI20171J29575_12214634Not Available902Open in IMG/M
3300027670|Ga0209423_10388676All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Kalotermitidae → Cryptotermitinae → Cryptotermes → Cryptotermes secundus696Open in IMG/M
3300028325|Ga0268261_10050385All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea → Termitoidae → Rhinotermitidae → Coptotermitinae → Coptotermes → Coptotermes formosanus3538Open in IMG/M
3300028325|Ga0268261_10060471Not Available3257Open in IMG/M
3300028325|Ga0268261_10113375All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda2431Open in IMG/M
3300028325|Ga0268261_10270467All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Polyneoptera → Dictyoptera → Blattodea → Blattoidea1528Open in IMG/M
3300028325|Ga0268261_10432781Not Available1093Open in IMG/M
3300028325|Ga0268261_10778452Not Available530Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut99.06%
Termite GutHost-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001542Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150CHost-AssociatedOpen in IMG/M
3300002238Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1Host-AssociatedOpen in IMG/M
3300002308Nasutitermes corniger P4 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P4Host-AssociatedOpen in IMG/M
3300005200Nasutitermes gut metagenomeHost-AssociatedOpen in IMG/M
3300027539Nasutitermes corniger midgut segment microbial community from laboratory colony in Florida, USA - Nc150M (SPAdes)Host-AssociatedOpen in IMG/M
3300027670Nasutitermes corniger crop gut microbial community from laboratory colony in Florida, USA - Nc150C (SPAdes)Host-AssociatedOpen in IMG/M
3300027966Nasutitermes corniger P5 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028325Nasutitermes corniger P1 segment gut microbial community from laboratory colony in Florida, USA - Nc150 P1 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20167J15610_1007018423300001542Termite GutIYIYIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIQGFKG*
JGI20167J15610_1007198623300001542Termite GutIYMYDISSLRVNDLTLILLTWRNGELIMPTNSRWDLIQRLKG*
JGI20169J29049_1051195313300002238Termite GutVLHIYIYIYIYDISCLRVNDLTLILLTWKNGKLLIMPANSRRDLIQGFKG*
JGI20169J29049_1054291513300002238Termite GutYDISRLKVNDLTLILPSGENGELLIMPANSRLDLIRGLKG*
JGI20169J29049_1057602923300002238Termite GutLHIYIYIYIYDISSLKVNDLTLILQRGENGELLMPANGRWDLIQRLKG*
JGI20169J29049_1058012713300002238Termite GutYIYIYIYIYIYDISSLRVNDLTLILGENGELLIMPANSRWDLIQGFKS*
JGI20169J29049_1066473223300002238Termite GutETSRMGAPYIYIYIYDISSLKVNNLTLILQRVENGERLIMPANSRWNLIRGLKG*
JGI20169J29049_1066680723300002238Termite GutYIYIYDISSLKVNDLTVILQREENGKLLIMPANIRWDLIQGFKG*
JGI20169J29049_1067191813300002238Termite GutIYIYIYIYIYIYDISSLRVNDLTLILLTCGENELLIMPANGRWDLIQRLKG*
JGI20169J29049_1067637013300002238Termite GutIYIYIYIYIYIYDISSLRVNDLTLILIAWINGELLIMPANGRWDLIQRLKG*
JGI20169J29049_1070782013300002238Termite GutSRNIKNGCSIYICDISSLKVNDLTLILLTWRNSELLIMPANSRWDLIRGLKG*
JGI20169J29049_1072481523300002238Termite GutPYIYIYIYIYDISSLRVNTLTLILLTWKNGKLLIMPANSRWDLIKGFKG*
JGI20169J29049_1075102813300002238Termite GutYIYDISSLKVNDLTLMLLSGENGKLLIMPANSGWDLIQVFKG*
JGI20169J29049_1075536613300002238Termite GutIYTYIYMTLVAPRVNDLTLILLSGENGELLIMPANGRWDLIQLLKG*
JGI20169J29049_1078523513300002238Termite GutIYIYIYIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLI*
JGI20169J29049_1079037213300002238Termite GutMGAPYIYDNSSPRVNDLTLILLTWRNGELLIMPADSRWDLIQGLKG*
JGI20169J29049_1082504123300002238Termite GutPYIYIYDISSLKVNDLTLILQRGENGELIMPADGRWDLIQRFKGLTEKERLL*
JGI20169J29049_1082602033300002238Termite GutVCDLETSRIGAPYIYIYIYIYDISSLKVNDLTLILQRGENKLLIKPANGRWDLIQRLKG*
JGI20169J29049_1085265613300002238Termite GutETSRMGAPYIYIYDISSLKVNDLTLILLTWRNGELIMPANSRWELIRALKG*
JGI20169J29049_1087343923300002238Termite GutYIYIYMYDISSLRVNDLTLILLTWRNGELIMPTNSRWDLIQRLKG*
JGI20169J29049_1089903223300002238Termite GutVLHIYIYIYIYDISSLRVNDLALILQRGENGEILIMPANSRWDLIQRLKG*
JGI20169J29049_1090563223300002238Termite GutQEWVLHMCIYIYIYIYIYDISSLRINDLTLILQREENGELLIMLANMRWDLIQRLKG*
JGI20169J29049_1093862933300002238Termite GutYIYIYIYDISSLKVNDLTLILQRGESGELLTMPANSRWDLIQRLKG*
JGI20169J29049_1095524613300002238Termite GutIKNGCSIYIYDISSLKVNNLTLILKRGEKNGELLIMPANSRWDLIRALKG*
JGI20169J29049_1104560913300002238Termite GutSRNIKNGCSIYIYDISSLKVNNLTLILLTWKNGDLLIMPANSRWDLIQAFKG*
JGI20169J29049_1109248233300002238Termite GutPYIYIYIYIYIYDISSLRVNDLTLILLTWREGELLIMPANSRWDLIQRLKG*
JGI20169J29049_1110053913300002238Termite GutGAPYIYDISSLRVNDLTLILLTWRNGKLLIMPANGRWNLIQGFKG*
JGI20169J29049_1113230333300002238Termite GutSRNIKNGCSIYIYDISSLKVNNLTLILLTWRNGELLIMPANSRWDLIWDLKG*
JGI20169J29049_1115976143300002238Termite GutDISSLRVNDLTLILQRGENGELTMPANSRWDLIQRLKG*
JGI20169J29049_1116983413300002238Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTWRKWENGELLIMPANSRWDLIRGLKG*
JGI20169J29049_1117941623300002238Termite GutIYIYIYIYIYDISSLKVNDLTLILLTWRNGELIMPANSRWNLIQRLKG*
JGI20169J29049_1120508813300002238Termite GutLETSRIGAPYICDISSLRVNDLTLILLSGENDKLLIMPANGRWDLIQRLKG*
JGI20169J29049_1122208713300002238Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTWRKGELVIMPANSGWDLIRGLKG*
JGI20169J29049_1124023613300002238Termite GutNIKNGCSIYIYIYDISSLKVNNLTLILLTWRNGEFLIMPANSRWNLIRVLKG*
JGI20169J29049_1127748713300002238Termite GutDLETSRIGAPYIYIYIYDISSLKVNNLTLILLNGELLIMPANSRWDLIRVLKG*
JGI20169J29049_1127842723300002238Termite GutCDLETSRMGAPYIYIYIYDISSLKVNDLTLILQRGENGELLIMPANSRWDLIRCLKG*
JGI20169J29049_1129582213300002238Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTWRKSGELLIMPANSRWDLIRGLKG*
JGI20169J29049_1129637443300002238Termite GutKHQEWVLHIYIYIYDISSLKVNKLTLILQRGKNGELLIMPANSRWDLIRGLKG*
JGI20169J29049_1130065013300002238Termite GutLRLLMSYIYIYIYIYIYDISSLRVNDLALSLLTWKNGKLLIMPANSRWNLIQGFKG*
JGI20169J29049_1132243013300002238Termite GutYIYIYEISSLRVNDLTLILLTWRKWWANNASNSRWDLI*
JGI20169J29049_1133213843300002238Termite GutSLRVNDLTLILQRGENGEFLTMPANSRWDLIQRLKG*
JGI20169J29049_1133809243300002238Termite GutYIYIYIYIYIYDISRLKAIDLTLILLTWRNGELIMPTNSRWDLIRALKG*
JGI20169J29049_1134659663300002238Termite GutYIYIYIYIYDISSLKVNDLTLILQRGEDDELLIMPANSRWDLIRGLKG*
JGI20169J29049_1136417143300002238Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTRRNGELLIMPANSRWDLIRGLKG*
JGI20169J29049_1138234213300002238Termite GutIGAPYIYIYIYIYDISSLRVNDLTLILITWRKLRALITPVNSRWDLIQRLKG*
JGI20169J29049_1139061813300002238Termite GutGCSIYIYIYIYIYIYDISSLKVNNLTLILLTWKNCELLIMPANSRWDLIRGLKG*
JGI20169J29049_1144524013300002238Termite GutGLLMSYIYIYMTNVIYIYDISSPRVNDLTLILLSGENGELIIMPANGRWDLIQRLKG*
JGI20171J29575_1156220623300002308Termite GutYIYIYDISSLKVNDLTLILPTGENAELLIMPTNGRWDLIQRLNG*
JGI20171J29575_1165001623300002308Termite GutAPYIYIYIYIYIYDISSLRVNDLTLILGENGELLIMPANSRWDLIQGFKS*
JGI20171J29575_1171582413300002308Termite GutIYIYIYIYDISSLKVNDLTLILLTWRNGELIMPANSRWNLIQRLKG*
JGI20171J29575_1174253013300002308Termite GutRNIKNGCSIYIYDISRLKVNDLTLILLTWKNGKLLIMPANSRWDLIRGSKG*
JGI20171J29575_1177637513300002308Termite GutYIYIYIYIYDISSLRVNTLTLILLTWKNGKLLIMPANSRWDLIKGFKG*
JGI20171J29575_1188599023300002308Termite GutYIYIYIYIYDISSLRVNDLTLILITWRKLRALITPVNSRWDLIQRLKG*
JGI20171J29575_1195803513300002308Termite GutTSRIGAPYIYDISSLRVNDLTLILISGENVEVIMPANSRWDLIQRLKG*
JGI20171J29575_1199507623300002308Termite GutLETSRMGAPYIYIYDISSLKVNNLTLILLAGENGDLLIMPANSRWNLIRGLKG*
JGI20171J29575_1199856513300002308Termite GutRNIKNGCSIYIYDISSLKVNNLTLILLTWKKTGELLIMPANSRWNLIRVLKG*
JGI20171J29575_1200197223300002308Termite GutIYIYIYIYIYDISSLKVNDLTLILPTGENGELLIMPANSGWDLIRGLKG*
JGI20171J29575_1202102113300002308Termite GutYIYDISSLKVNNLTLILLNGENGELLIMPANSRWDLIRGLKG*
JGI20171J29575_1205979313300002308Termite GutIKNRCSIYIYDISSLRVNDLTLILLTWRNGELLIMPANSRWDLIQGFKG*
JGI20171J29575_1208053613300002308Termite GutIYIYIYDISSLKVNDLTLILLSGESGELLTMPANSRWDLIQRLKG*
JGI20171J29575_1210536723300002308Termite GutIYIYIYIYIYDISSLRVNDLTLILLTWRKGELIMPANSR*
JGI20171J29575_1216597033300002308Termite GutLETSRIGAPYIYIYDISSLKVNDLTLILQGGENDELIMPANSRWDLIRVLKG*
JGI20171J29575_1221463413300002308Termite GutRNIKNGCSIYIYDISSLKVNNLSLILLTWKNGELLIMPANSRRDLIRVLKC*
JGI20171J29575_1229340833300002308Termite GutSIYIYIYIYIYDISSLKVNNLTLIMLTWRNGELLIMPANSRWDLIRVL*
JGI20171J29575_1229443113300002308Termite GutVLHIYIYIYIYIYDISSLGVNDLTLIRERGENGELLIVPANRRWDLIQRLKG*
JGI20171J29575_1234809033300002308Termite GutTSRMGAPYIYIYIYDISSLKVNDLTLILQRGENGELLIMPANSRWDLIRCLKG*
JGI20171J29575_1235674123300002308Termite GutYIYIYIYIYDISSLKVNDLTLILQGGENGKLMMPANSRWDLIQRSKG*
JGI20171J29575_1243605233300002308Termite GutIYIYIYIYIYDFNSLRVNDLTLILLCGENGELIMPTNSRWDLIQRLKG*
JGI20171J29575_1244580113300002308Termite GutTSRIGAPYIYIYIYDISSLKVNNLTLILLNGELLIMPANSRWDLIRVLKG*
JGI20171J29575_1245457023300002308Termite GutVCDLETSRMGAPYIYIYDISSLKVNNLTLTLPIGENGELLIMPANSRCDLIRGLKG*
JGI20171J29575_1245566933300002308Termite GutYIYDISSLRVNNLALILLIGENGELTMPANSRWDLIQRLKG*
JGI20171J29575_1246700533300002308Termite GutSYIYIYIYIYIYDISSLRVNDLALSLLTWKNGKLLIMPANSRWNLIQGFKG*
JGI20171J29575_1247580113300002308Termite GutSRIGAPYIYIYDISSLKVNDLTLILLSGENGEILIMLANGRWDLIQRLKG*
JGI20171J29575_1252084223300002308Termite GutIYIYIYIYIYIYDISSLKVNNLTLILQRDENGELLIMPANGKWDLIRGLKV*
JGI20171J29575_1252677713300002308Termite GutAPYIYIYIYIYDISSLRVNDLTLILLSGENGKLLIMPANIRWDLIQRFKG*
JGI20171J29575_1255202413300002308Termite GutMNDISSLRVNDLTLILPSGENGELLIMPANGRWDLIQRLKG*
JGI20171J29575_1255644613300002308Termite GutYIYIYIYIYIYDISSLKVNNLTLILLTWKNCELLIMPANSRWDLIRGLKG*
JGI20171J29575_1258170953300002308Termite GutDLETSRMGAPYIYIYDISSLKVNNLTLIQRGETGELLIMPANSRWDLIWGLKG*
JGI20171J29575_1260862013300002308Termite GutLGLLMSYIYIYMTNVIYIYDISSPRVNDLTLILLSGENGELIIMPANGRWDLIQRLKG*
Ga0072940_109919423300005200Termite GutYIYIYIYDISSLKVNDLTLILQRGENGKLLIMPANGRWDLIQRLNG*
Ga0209424_102478213300027539Termite GutDLETSRIGAPYIYIYIYDISSLKVNNLTLILLNGELLIMPANSRWDLIRVLKG
Ga0209423_1011383513300027670Termite GutGAPYIYIYIYDISSLKVNNLTLILLNGELLIMPANSRWDLIRVLKG
Ga0209423_1021936713300027670Termite GutIYIYIYDISSLKVTNLNGELLIMPANSRWDLIRGLKG
Ga0209423_1031073213300027670Termite GutMYIYIYIYIYIYDISSLKVNDLTLILLTWRNGELIMPANSRWNLIQRLKG
Ga0209423_1038867613300027670Termite GutIYIYIYIYIYIYDISSLRLNNLTLILLTWRNGELIMPANSRWDLIQLLKG
Ga0209738_1021737613300027966Termite GutYIYIYDISSLRVNDLALSLLTWKNGKLLIMPANSRWNLIQGFKG
Ga0209738_1022685313300027966Termite GutGCSIYIYIYDISSLKVTNLNGELLIMPANSRWDLIRGLKG
Ga0268261_1005038533300028325Termite GutIYIYIYIYIYIYDIRNLRVNDLTLILLTWRNGELIMPANSRWDLIRGLKG
Ga0268261_1006047113300028325Termite GutIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIQRLKS
Ga0268261_1006669943300028325Termite GutMSYIYIYIYIYIYDISSLRVNDLALSLLTWKNGKLLIMPANSRWNLIQGFKG
Ga0268261_1011337513300028325Termite GutEWVLHIYIYIYAISRLKVNDLTLILLTWRNGELIMPANSRWDLIRALKG
Ga0268261_1013367713300028325Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTRRNGELLIMPANSRWDLIRGLKG
Ga0268261_1014970013300028325Termite GutGCSIYIYIYIYIYIYDISSLKVNNLTLILLTWKNCELLIMPANSRWDLIRGLKG
Ga0268261_1019445013300028325Termite GutKNGCSIYIYIYIYIYDISSLRVNDLTLILLTWRNGELLIMPANSRWDLIQRLKG
Ga0268261_1021301813300028325Termite GutCSIYIYIYIYIYDISRLKVNNLTLILLTWRKLLIMPANSRWDLIRGLKG
Ga0268261_1027046713300028325Termite GutYIYIYIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIRGLKG
Ga0268261_1028926513300028325Termite GutSRNINNGCSIYIYIYIYDISSLKVNNLTLILLTWRKLRAPNNARNSRWDLIRGLKG
Ga0268261_1042958013300028325Termite GutGAPYIYIYIYIYIYDISSLRVNDLTLILLTWRKWCKLLIMPANSRWDLIQRLKG
Ga0268261_1043278113300028325Termite GutIYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIRALKG
Ga0268261_1044691113300028325Termite GutIYIYIYIYIYIYDISSLRVNDLTLILIAWINGELLIMPANGRWDLIQRLKG
Ga0268261_1046584513300028325Termite GutCSIYIYIYIYIYIYDISSLKVNNLTLILLTGENGELLIMPANSRWDLIRAFKG
Ga0268261_1064133813300028325Termite GutIYIYIYIYIYIYDISSLRVNDLTLILLTCGENELLIMPANGRWDLIQRLKG
Ga0268261_1065359813300028325Termite GutIYIYIYIYIYIYDISSLKVNNLTLILLTWRNELLIMPANSRWDLIRILKG
Ga0268261_1076178813300028325Termite GutIYIYIYIYIYDISSLMLIMPELIMPANSRWNLIQRLKG
Ga0268261_1076709213300028325Termite GutYIYIYIYIYDISSLRVNDLTLILRCGENGKLLIMPANSRWDLIQGFKG
Ga0268261_1077845213300028325Termite GutYIYDISSLRVNDLTLILLTWRNGELIMPANSRWDLIRGLKG


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