Metagenome / Metatranscriptome Family F094471

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	105 residues
Representative Sequence	MRNALLLATGLWLAGAGLALAQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKD
Number of Associated Samples	98
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.99 %
% of genes near scaffold ends (potentially truncated)	91.51 %
% of genes from short scaffolds (< 2000 bps)	87.74 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.396 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (14.151 % of family members)
Environment Ontology (ENVO)	Unclassified (28.302 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.70% β-sheet: 30.56% Coil/Unstructured: 40.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02686	Glu-tRNAGln	77.36
PF13483	Lactamase_B_3	8.49
PF03652	RuvX	1.89
PF08239	SH3_3	0.94
PF12706	Lactamase_B_2	0.94
PF01042	Ribonuc_L-PSP	0.94
PF13683	rve_3	0.94
PF16576	HlyD_D23	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	77.36
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	1.89
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.40 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.51 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	73.58 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	70.75 %
Unclassified	root	N/A	6.60 %

Name	Rank	Taxonomy	Distribution
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	23.58 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	21.70 %
Unclassified	root	N/A	6.60 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	23.58 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	20.75 %
Unclassified	root	N/A	6.60 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.89 %
Methyloligella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	23.58 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	20.75 %
Unclassified	root	N/A	6.60 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.89 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.94 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	23.58 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	20.75 %
Unclassified	root	N/A	6.60 %
Mesorhizobium sp. L2C084A000	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L2C084A000	0.94 %
Mesorhizobium sp. URHC0008	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. URHC0008	0.94 %
Methyloligella halotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02SXYCT	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. L2C084A000	504	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10067918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300000890\|JGI11643J12802_10676682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	672	Open in IMG/M
3300001213\|JGIcombinedJ13530_107884726	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300004114\|Ga0062593_100523737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1106	Open in IMG/M
3300004157\|Ga0062590_101021672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	788	Open in IMG/M
3300004463\|Ga0063356_102616014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300004479\|Ga0062595_101741323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	589	Open in IMG/M
3300004480\|Ga0062592_102622307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. URHC0008	509	Open in IMG/M
3300005093\|Ga0062594_102415352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	575	Open in IMG/M
3300005105\|Ga0066812_1024740	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300005164\|Ga0066815_10006353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1328	Open in IMG/M
3300005332\|Ga0066388_107268536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	556	Open in IMG/M
3300005339\|Ga0070660_101753372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	529	Open in IMG/M
3300005354\|Ga0070675_100738644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	898	Open in IMG/M
3300005367\|Ga0070667_101704545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	593	Open in IMG/M
3300005456\|Ga0070678_101911052	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300005616\|Ga0068852_101833514	All Organisms → cellular organisms → Bacteria → Proteobacteria	629	Open in IMG/M
3300006059\|Ga0075017_100544384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	884	Open in IMG/M
3300006172\|Ga0075018_10190356	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300006572\|Ga0074051_11729843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	801	Open in IMG/M
3300006579\|Ga0074054_12029878	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300006605\|Ga0074057_10021512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	707	Open in IMG/M
3300006847\|Ga0075431_101389537	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009174\|Ga0105241_10958030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	798	Open in IMG/M
3300009176\|Ga0105242_10607521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1057	Open in IMG/M
3300009176\|Ga0105242_13112106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	514	Open in IMG/M
3300009177\|Ga0105248_10697786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1145	Open in IMG/M
3300009553\|Ga0105249_10633776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1126	Open in IMG/M
3300010043\|Ga0126380_10133848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1556	Open in IMG/M
3300010359\|Ga0126376_11039085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	823	Open in IMG/M
3300010371\|Ga0134125_10977482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	929	Open in IMG/M
3300012492\|Ga0157335_1032018	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300012951\|Ga0164300_10746435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300012951\|Ga0164300_10746438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300012958\|Ga0164299_10992192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	618	Open in IMG/M
3300012960\|Ga0164301_10414544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	947	Open in IMG/M
3300012984\|Ga0164309_10333595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1107	Open in IMG/M
3300012987\|Ga0164307_10313803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1123	Open in IMG/M
3300012989\|Ga0164305_10114988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1758	Open in IMG/M
3300012989\|Ga0164305_10854441	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300013102\|Ga0157371_10694118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	762	Open in IMG/M
3300013308\|Ga0157375_11408122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	821	Open in IMG/M
3300013308\|Ga0157375_12434191	All Organisms → cellular organisms → Bacteria → Proteobacteria	625	Open in IMG/M
3300014969\|Ga0157376_11653909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	675	Open in IMG/M
3300015200\|Ga0173480_10445590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	763	Open in IMG/M
3300015374\|Ga0132255_105079903	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300017821\|Ga0187812_1276027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	535	Open in IMG/M
3300017822\|Ga0187802_10005760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3776	Open in IMG/M
3300017924\|Ga0187820_1102744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300017947\|Ga0187785_10610734	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300017961\|Ga0187778_10235663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1172	Open in IMG/M
3300017974\|Ga0187777_10079152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2141	Open in IMG/M
3300018076\|Ga0184609_10128098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1158	Open in IMG/M
3300018076\|Ga0184609_10335184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300018469\|Ga0190270_10695133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1008	Open in IMG/M
3300018481\|Ga0190271_13337797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300020150\|Ga0187768_1076647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	754	Open in IMG/M
3300021081\|Ga0210379_10446864	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300023066\|Ga0247793_1025186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	877	Open in IMG/M
3300023263\|Ga0247800_1034046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300025313\|Ga0209431_10469860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	961	Open in IMG/M
3300025904\|Ga0207647_10074839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2039	Open in IMG/M
3300025923\|Ga0207681_11463516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300025927\|Ga0207687_10897393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	758	Open in IMG/M
3300025933\|Ga0207706_11489780	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300025934\|Ga0207686_11189166	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300025972\|Ga0207668_10978497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	755	Open in IMG/M
3300026116\|Ga0207674_11872549	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300026142\|Ga0207698_11649630	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300027682\|Ga0209971_1162324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	551	Open in IMG/M
3300027703\|Ga0207862_1002749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5265	Open in IMG/M
3300027894\|Ga0209068_10500339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	701	Open in IMG/M
3300027907\|Ga0207428_10585053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	805	Open in IMG/M
3300028380\|Ga0268265_11272235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	735	Open in IMG/M
3300028590\|Ga0247823_10550750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	869	Open in IMG/M
3300028592\|Ga0247822_10447601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1014	Open in IMG/M
3300028592\|Ga0247822_11747981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	530	Open in IMG/M
3300028596\|Ga0247821_10370681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	888	Open in IMG/M
3300028796\|Ga0307287_10245227	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300028802\|Ga0307503_10731478	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300028809\|Ga0247824_10335625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	859	Open in IMG/M
3300028889\|Ga0247827_10252255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1005	Open in IMG/M
3300030336\|Ga0247826_11066620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	644	Open in IMG/M
3300030494\|Ga0310037_10283184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	710	Open in IMG/M
3300031547\|Ga0310887_10130576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1291	Open in IMG/M
3300031562\|Ga0310886_11004023	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300031720\|Ga0307469_10433038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1133	Open in IMG/M
3300031740\|Ga0307468_100038531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2372	Open in IMG/M
3300031740\|Ga0307468_101690616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	595	Open in IMG/M
3300031740\|Ga0307468_101718045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300031847\|Ga0310907_10323850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans	783	Open in IMG/M
3300031854\|Ga0310904_10641616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	729	Open in IMG/M
3300031858\|Ga0310892_11360211	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031892\|Ga0310893_10462191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	565	Open in IMG/M
3300031908\|Ga0310900_10485437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	957	Open in IMG/M
3300031912\|Ga0306921_10253405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2063	Open in IMG/M
3300031942\|Ga0310916_10937714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	724	Open in IMG/M
3300032075\|Ga0310890_11072653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.64%
Host-Associated	Host-Associated	27.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.43%
Plants	Host-Associated → Plants	27.36%
Aquatic	Environmental → Aquatic	13.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.43%
Freshwater	Environmental → Aquatic → Freshwater	6.60%
Sediment	Environmental → Aquatic → Sediment	5.66%
Marine	Environmental → Aquatic → Marine	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.66%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.72%
Loam	Environmental → Terrestrial → Soil → Loam	3.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.94%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.66%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.89%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.94%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.26%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.83%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.94%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.94%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.94%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.94%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.94%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02892650	2070309004	Green-Waste Compost	LAWAQELPANNLPEGTFATEDGCNKLAAKTPAELGEDFDFEILTKKGHLAYQQACDFVNVYTHDATSWVATAFCDELGYTYPDLFSIKQKADGRLGVTRLTDLTNQGSNASSIES
AF_2010_repII_A1DRAFT_100679181	3300000597	Forest Soil	MMKRAALFAMTLLLLGAGLAFAQAPENTLPEGTFASSLEDCTTLATKTPAELGEDFDFEVLTKKGLVAFQQACDFVNVFGHDAKSWVATAFCDEAGYTYPDLFSIKQKDDG
JGI11643J12802_106766821	3300000890	Soil	VIVRTVLFGVGLWLAAADMALAQSPENPLPEGTFASTKDDCAKLATKTTAEIGDEIDFEVLTKKGLMGYRQVCDFVSVSARDAKSWVATAFCDESGYTYP
JGIcombinedJ13530_1078847262	3300001213	Wetland	MRNALLLATGLWLAGAGLALPQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDA
Ga0062593_1005237373	3300004114	Soil	MRHALLVVTGLWLAGAGSALAQAPDNALPEGTFASTKEDCALLATKTPAELGEEFDFEVVTKKGLVGYQQVCDFVNVFARDA
Ga0062590_1010216722	3300004157	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKDDGRLNVT
Ga0063356_1026160141	3300004463	Arabidopsis Thaliana Rhizosphere	MRHALLVVTGLWLAGAGSALAQAPDNALPEGTFASTKEDCALLATKTPAELGEEFDFEVVTKKGLVGYQQVCDFVNVFARDAKSWVATAFCDEAGYTYPDLFSIKQKDDGKLNVTRITDLTQQGGYDASA
Ga0062595_1017413232	3300004479	Soil	MRHALLVVTGLWLAGAGSALAQAPDNALPEGTFASTKEDCALLATKTPAELGEEFDFEVVTKKGLVGYQQVCDFVNVFARDAKSWVATAFCDEAGYTYPDLFSIKQKDDGKLNVTRIT
Ga0062592_1026223071	3300004480	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKDDGRLNVTRITDLTQQGGYDASAQ
Ga0062594_1024153521	3300005093	Soil	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNV
Ga0066812_10247401	3300005105	Soil	MRNALLVATGLWLAGAGSTLAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKRLVGYQQVCDFVNVF
Ga0066815_100063531	3300005164	Soil	MRNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELREEFDFEVLTKKGLVGYQQVCDFVNVFARDAKDWVATAFCDEAGYT
Ga0066388_1072685361	3300005332	Tropical Forest Soil	MRNALLLATGLWLAGAGSALAQAPDSTLPEGTFASTKEDCALLATKTPAELGQEFDFEVLTKKGLVGYQQVCDFVNVFARDGKDWVATAFCDEAGYTYPDLFSIKQKDDG
Ga0070660_1017533721	3300005339	Corn Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLF
Ga0070675_1007386443	3300005354	Miscanthus Rhizosphere	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQKDDGRLNVTRITD
Ga0070667_1017045452	3300005367	Switchgrass Rhizosphere	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEINFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYT
Ga0070678_1019110521	3300005456	Miscanthus Rhizosphere	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEA
Ga0068852_1018335142	3300005616	Corn Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHD
Ga0075026_1009877331	3300006057	Watersheds	MGRDAMLAAGLFLFSANLAWAQELPANSLPEGTFATEDGCKKLAAKTPAELGEDLDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKADGRLDVTRFTDLTDQGSNGSSTESDTEDSESSNEPPKA
Ga0075017_1005443841	3300006059	Watersheds	MGRDAMLAAGLFLFSANLAWAQELPANSLPEGTFAAEDGCKKLGAKTPAELGEELDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKADGRLDVTRFTDLTDQG
Ga0070715_102798161	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKRAILFATGLSLLGAGLAFAQAPENSLPEGTFASSPEDCATLATKTPTELGEDFDFEVLTRKGLVAYQQACDF
Ga0075018_101903561	3300006172	Watersheds	MKQAILFATGLSLLGAGLAFAQAPENSLPEGTFASSPEDCATLATKTPVELGEDFDFEVLTRKGLVAYQQACDFVNVFAHDAKSWVATAFCDEAGYTY
Ga0074051_117298431	3300006572	Soil	MRNALLVATGLWLAGAGSTLAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFARDAKDWVATAFCDEAGYTYPDLFSIKQKDDG
Ga0074054_120298781	3300006579	Soil	MRNALLVATGLWLAGAGLALPQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFA
Ga0074057_100215122	3300006605	Soil	MRNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFARDAKDWVATAFCDEAGYTYPDLFSIKQKDDG
Ga0075431_1013895371	3300006847	Populus Rhizosphere	VIVRTVLFGVGLWLAAADMALAQSPENPLPEGTFASTKDDCAKLATKTTAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKSWVATAFCDES
Ga0105100_101313091	3300009166	Freshwater Sediment	MTRAVLLALGLWLAGDGMAPAQTPENSLPEGTFASTKDDCAKLATRTPAEIGDEMDFEVLTKKGLIGYRQVCD
Ga0105241_109580303	3300009174	Corn Rhizosphere	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSAR
Ga0105242_106075213	3300009176	Miscanthus Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYP
Ga0105242_131121062	3300009176	Miscanthus Rhizosphere	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVTRITDLTQ
Ga0105248_106977864	3300009177	Switchgrass Rhizosphere	VLRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVTRITDLTQQGG
Ga0105249_106337761	3300009553	Switchgrass Rhizosphere	MRNALLLATGLWLAGAGLALAQAPDSTLPEGTFASTKEDCAMLATETPVELGKEFDFEVLTKKGLVGYQQVCDFVNVLAHDAKSWVATAFCDEGGY
Ga0126380_101338481	3300010043	Tropical Forest Soil	MRNALLLATGLWLAGAGSALAQAPDSTLPEGTFASTKEDCALLATKTPAELGQEFDFEVLTKKGLVGYQQVCDFVNVFARDGKDW
Ga0126376_110390853	3300010359	Tropical Forest Soil	MRNALLLATGLWLAGAGSALAQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKEGLVGYQQVCDFVNVFARDGK
Ga0134125_109774823	3300010371	Terrestrial Soil	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQKDDGRLNVTR
Ga0157335_10320181	3300012492	Arabidopsis Rhizosphere	MRNALLLATGLWLAGAGLALPQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNV
Ga0164300_107464352	3300012951	Soil	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKD
Ga0164300_107464382	3300012951	Soil	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKD
Ga0164299_109921921	3300012958	Soil	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVSRITDLTQQ
Ga0164301_104145441	3300012960	Soil	MERAMLATGLLLLGAGLALAQAPENSLPEGTFASTPEDCATLATKTPAELGEDFDFEVLTRKGLVAYQQACDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKDDG
Ga0164309_103335952	3300012984	Soil	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAG
Ga0164307_103138031	3300012987	Soil	MKQAILFATGLSLLGAGLAFAQAPENSLPEGTFASSPEDCATLATKTPVELGEDFDFEVLTRKGLAAYQQACDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKDDGKLNITRITDLTQQGGYDA
Ga0164305_101149884	3300012989	Soil	MKRAILFATGLSLLGAGMAFAQAPENSLPEGTFASSPEDCATLATKTPAELGEDFDFEVLTRKGLVAYQQACDFVNVFAHDAKSWVATAFCDE
Ga0164305_108544411	3300012989	Soil	MLATGLLLLGAGLALAQAPENSLPEGTFASTPEDCATLATKTPAELGEDFDFEVLTRKGLVAYQQACDFVNVFAHDAKSWVATAFCD
Ga0157371_106941181	3300013102	Corn Rhizosphere	MMRTVALGVGLWLAGAGMAPAQAPENSPPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPD
Ga0157375_114081221	3300013308	Miscanthus Rhizosphere	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKEDCAKLATKTPAEIGDEIDFEVLNKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDES
Ga0157375_124341912	3300013308	Miscanthus Rhizosphere	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVC
Ga0157376_116539091	3300014969	Miscanthus Rhizosphere	MMRAVALGVGLWLGGAGMAPAQAPENSLPDGTFASTKEDCAKLATKTPAEIGDEIDFEVLNKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDL
Ga0173480_104455902	3300015200	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIK
Ga0132255_1050799031	3300015374	Arabidopsis Rhizosphere	MKRALMLGIPIMLLGAGLAVAQAPENTLPEGTFASASEDCTKLATKTPADLGDDFDFEVLTKKGFVAFQQTCDFVNVFAHDAKSWVATAFCAWLKSKGVA
Ga0187812_12760272	3300017821	Freshwater Sediment	MRRVALLVSGLWLLGTGLAYAQALPEGTFASEQDGCAKLEAKTPAELGEDLDFQVLTKKGLTAYQQTCDFVNVFGHDATSWVATAFCDEGGYTYPDLFSIKQRENGTLNITRITDLTEQGSD
Ga0187802_100057604	3300017822	Freshwater Sediment	MGRAAMLAAGLFLFSANLAWAQERSANSLPEGTFATEDGCNKLAAKTPAELGEDLDFEILTKKGLLANEQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKDDSRLNVTRFTDLTDQGNGSPADT
Ga0187820_11027441	3300017924	Freshwater Sediment	MTRAVLFATGLLLLGAGLALAQAPENSLPEGTFASTPKDCATLATKTPAELGEDFDFEVLTKKGLVGYQQTCDFVNVFAHDRKSWVATAFCDESGYTYPDLF
Ga0187803_100786761	3300017934	Freshwater Sediment	MGRAAMLAAGLFLFSANLASAQERPANSLPEGTFATEDGCNKLAAKTPAELGEDLDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKDDSRLNVTRFTDLTDQGNGSPADTEDSESSKSPPKAC
Ga0187785_106107341	3300017947	Tropical Peatland	MKRALMLGIPIMLLGAGLALGQAPENALPEGTFASTPEDCTKLATKTPADLGDGFDFEVLTKTGFVAFQQTCDFVNVFAHDAKSWVATAFCDEAGYTYP
Ga0187817_102903092	3300017955	Freshwater Sediment	MGRAAMLAAGLFLFSANLAWAQERSANSLPEGTFATEDGCNKLAAKTPAELGEDLDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKDDSRLNVTRFTDLTDQGNGSPADTEDSESSKSPPKASGDSKRIA
Ga0187778_102356631	3300017961	Tropical Peatland	VGRAAIAAGLFLFSANLAWAQELPANSLPEGTFASEDGCNKLAAKTPAELGEDLDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKADGRLNVTRFTDLTDQSSTGSPNDSG
Ga0187777_100791524	3300017974	Tropical Peatland	MTRAVLFATGLLLLGAGLALAQAPENSLPEGTFSSTAKDCATLATKTPAELDEDFDFEVLTKKGLVGYQQTCDFVNVFAHDRKSWVATAFCDESGYTYPDLFSIKQKDDGKLNVTRSTDFTQ
Ga0187766_100167894	3300018058	Tropical Peatland	VGRAAIAAGLFLFSANLAWAQELPANSLPEGTFASEDGCNKLAAKTPAELGEDLDFEILTKKGLLANQQACDFVNVYTHDATSWVATAFCDEGGYTYPDLFSIKQKADGRLNVTRFTDLTDQSSTGSPNDSGAADSESSD
Ga0184609_101280981	3300018076	Groundwater Sediment	MRRALLFATGLWLAGAGLGQAQAPENSLPEGTFASTQEDCALLATKTTAELGEEFDFEVLTKKGLAGYQQACDFVTVSARDAKSWVATAYCDEAGYTYPDLFSIKQKDDGRLNVTRITDLTQ
Ga0184609_103351842	3300018076	Groundwater Sediment	MRNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFARDAKDWVATAFCDEAGYTYPDLFSIKQKDDGKLNITRITDLTQQGGYDASAQ
Ga0190270_106951333	3300018469	Soil	MRTVALGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQKDD
Ga0190271_133377972	3300018481	Soil	MMMRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKDDGRLNVT
Ga0187768_10766472	3300020150	Tropical Peatland	MTRAVLFATGLLLLGAGLALAQAPENSLPEGTFSSTAKDCATLATKTPAELDEDFDFEVLTKNGLVRYQQTCDFVNVFAHDRKSWVATAFCDESGYTYPDLFSIKQKDDGKLNVTRITDFTQ
Ga0210379_104468642	3300021081	Groundwater Sediment	MRNALLVATGLWLAGAGSALAQAPDSALPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFA
Ga0247793_10251861	3300023066	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKDDG
Ga0247800_10340463	3300023263	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKDDGRLNVTRITDL
Ga0209431_104698601	3300025313	Soil	MIRAVLFGVGLWLAAAGMAPAQAPESSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSAR
Ga0207647_100748394	3300025904	Corn Rhizosphere	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESG
Ga0207681_114635162	3300025923	Switchgrass Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVTRITDL
Ga0207687_108973932	3300025927	Miscanthus Rhizosphere	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQKDDGRLNVTRITDLTQQGGYDASA
Ga0207706_114897801	3300025933	Corn Rhizosphere	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLNGYRQGCDF
Ga0207686_111891661	3300025934	Miscanthus Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAF
Ga0207668_109784971	3300025972	Switchgrass Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKDDGRLNVT
Ga0207674_118725492	3300026116	Corn Rhizosphere	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIVDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAF
Ga0207698_116496302	3300026142	Corn Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSW
Ga0209971_11623242	3300027682	Arabidopsis Thaliana Rhizosphere	MRHALLVVTGLWLAGAGSALAQAPDNALPEGTFASTKEDCALLATKTPAELGEEFDFEVVTKKGLVGYQQVCDFVNVFARDAKSWVATAFCDEAGYTYPDLFSIKQKDDGKLNVTRITDL
Ga0207862_10027495	3300027703	Tropical Forest Soil	MRRAVLFATGLLLLGVGLALAQTPENSLPEGTFASTPEDCATLAAKAPAELGGDSDLEVLTKKGLVGYQQTCDFVNVFAHDGNCVATALCDESNYSYPDPFSIDGKLKRHQDHRSDQARR
Ga0209068_105003392	3300027894	Watersheds	MGRAVVLALGLWLLGAGLAKAQAPDASLPEGTFASTQEGCTKLEKATPAELGEDLDFQVLSKKGLVAYQQICDFVNVFARDATSWVATAFCDEAG
Ga0207428_105850531	3300027907	Populus Rhizosphere	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQ
Ga0268265_112722351	3300028380	Switchgrass Rhizosphere	MRNALLLATGLWLAGAGLALAQASDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVSRIT
Ga0247823_105507503	3300028590	Soil	MQNALLLATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLFGYQQVCDFVNVFARDAKDWVATAFCEEAGYTY
Ga0247822_104476013	3300028592	Soil	MRSALLVASGLWLAGAGLALPQAPDSPLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKDDGRLNVTRITDLTQQG
Ga0247822_117479812	3300028592	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWVATAFCDESGYTYPDLFSIKQKD
Ga0247821_103706813	3300028596	Soil	MQNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLFGYQQVCDFVNVFARDAKDWVA
Ga0307287_102452272	3300028796	Soil	MQNALLVATGLWLAGAGSALAQAPDSALPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHGA
Ga0307503_107314781	3300028802	Soil	MTRAVLLATGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAVLATKTPAELGEEFDFEVLTKKGLTGFQQVCDFVTVSARDAKSW
Ga0247824_103356251	3300028809	Soil	MMRAVVLGVGLWLGAAGTAPAQAPESLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQACDFVSVSARDAKSWVATAFCDESGYT
Ga0247827_102522553	3300028889	Soil	MRNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLFGYQQVCDFVNVFARDAKDWVATAFCDEAGYTYPDLFSIKQKDDGKLN
Ga0247826_110666201	3300030336	Soil	MMRAVVLGVGLWLGAAGTAPAQAPENSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQACDFVSVSARDAKSWVATAFCDESGYTYPD
Ga0310037_102831841	3300030494	Peatlands Soil	MRRVALLVSGLWLLGTGLAYAQALPEGTFASEQDGCAKLEAKTPAELGEDLDFQVLTKKGLTAYQQTCDFVNVFGHDATSWVATAFCDEGGYTYPDLFSIKQRENGTLNVTRITDLTEQGSDESTS
Ga0310887_101305763	3300031547	Soil	MRSALLLATGLWLAGAGSVLPQAPDSTLPEGTFASTKEDCALLATKTPSELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDGKSWVATAFCEEAGYTYPDLFSIKQKDDGRLNVTRITDL
Ga0310886_110040232	3300031562	Soil	MIRAVVLGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSV
Ga0307469_104330381	3300031720	Hardwood Forest Soil	MRNALLLATGLWLAGAGLALAQAPDSTLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKSWVATAFCDEAGYTYPDLFSIKQKD
Ga0307468_1000385315	3300031740	Hardwood Forest Soil	MRNALLVATGLWLAGAGSALAQAPDSGLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLFGYQQVCDF
Ga0307468_1016906161	3300031740	Hardwood Forest Soil	MRNALLVASGLWLAGAGLALPQAPDSPLPEGTFASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKSWVATAFCDEGGYTYPDLFSIKQKDDGRLNVTRITDLTQQGGYD
Ga0307468_1017180451	3300031740	Hardwood Forest Soil	MRSALLFATGLWLAGAGSAQPQAPDSSLPEGTYASTKEDCALLATKTPAELGEEFDFEVLTKKGLVGYQQVCDFVNVFAHDAKDWVATAFCEEAGYTYPDLFSIKQ
Ga0310907_103238503	3300031847	Soil	MMRTVALGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARNAKSWVA
Ga0310904_106416161	3300031854	Soil	MMRTVALGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARNAKSWVATAFCDESGYTYPDLFSIKQQDD
Ga0310892_113602112	3300031858	Soil	MKRAVVLGLGLWLAAASIAPAQAPESPLPEGTFASTKDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARDAKTWV
Ga0310893_104621911	3300031892	Soil	MMRTVALGVGLWLAGAGMAPAQAPENSLPDGTFASTRDDCAKLATKTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSGRDAKSWVATAFCDESGYTYPDLFSIKQKDDGRLNVT
Ga0310900_104854371	3300031908	Soil	MMRAVALGVGLWLAGAGMAPAQAPENSLPDGTFASTKDDCAKLATRTPAEIGDEIDFEVLTKKGLTGYRQVCDFVSVSARNAKSWVATAFC
Ga0306921_102534051	3300031912	Soil	MMKRAALFAMTLLLLGAGLALAQAPENTLPEGTFASSLEDCTTLATKTPAELGEDFDFEVLTKKGLVAFQQTCAFVNVFG
Ga0310916_109377141	3300031942	Soil	MIRAALFAMTLLLLGAGLALAQAPENTLPEGTFASSLEDCTTLATKTPAELGEDFDFEVLTKKGLVAFQQTCAFVNVFGHDAKSWVATAFCDEAGYTYPDLFSIKQKDDGKLNVTRLTDL
Ga0310890_110726531	3300032075	Soil	VIVRTVLFGVGLWLAAADMALAQSPENPLPEGTFASTKDDCAKLATKTTAEIGDEIDFEVLTKKGLTGYRQVCDFVNVSARDAKSWVATAFCDESGYTYPDLFSIKQKDDG
Ga0307471_1035774771	3300032180	Hardwood Forest Soil	MRRAAMLAAGLFLLSPNLAWAQELPTNSLPEGAFASDDGCIKLAGKTPAELGEDLDFEILTKKRLLAYQRACDFVNVYTHDATSWVATAFCDELGYTYPDLISIKQKDDGRLDVTRFTDLINQRTNNGSAESNTEDSESSNQSPKAPGDSKNGHAAPEDEQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences